Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06699.t1 | XP_003602263.1 | 98.5 | 404 | 5 | 1 | 1 | 403 | 1 | 404 | 9.00E-214 | 752.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06699.t1 | D2K8N5 | 70.5 | 404 | 117 | 2 | 1 | 403 | 1 | 403 | 2.1e-150 | 533.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06699.t1 | G7J7F3 | 98.5 | 404 | 5 | 1 | 1 | 403 | 1 | 404 | 6.5e-214 | 752.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058095 | MS.gene06699 | 0.822155 | 2.76E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06699.t1 | MTR_3g091640 | 98.515 | 404 | 5 | 1 | 1 | 403 | 1 | 404 | 0.0 | 820 |
| MS.gene06699.t1 | MTR_1g050518 | 94.277 | 332 | 13 | 1 | 72 | 403 | 19 | 344 | 0.0 | 604 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06699.t1 | AT5G53000 | 70.864 | 405 | 116 | 1 | 1 | 403 | 1 | 405 | 0.0 | 583 |
Find 112 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACACCAACCACTGATATT+TGG | 0.154577 | 3.3:+76407603 | MS.gene06699:CDS |
| TAAGATTCTAACTCCTCTTT+TGG | 0.196712 | 3.3:-76406177 | None:intergenic |
| AAGAAAACATGACACCTTTC+TGG | 0.241137 | 3.3:-76406238 | None:intergenic |
| TGTTCAGGCATTTGATCTTC+TGG | 0.248796 | 3.3:+76406991 | MS.gene06699:intron |
| AGGGGTAAGCTTCGAATTTC+CGG | 0.250990 | 3.3:-76408141 | None:intergenic |
| GGTGGACAGGGCAGCTGCTT+TGG | 0.266681 | 3.3:-76406510 | None:intergenic |
| AATGCGAAAACATGATTAAT+AGG | 0.270151 | 3.3:+76404997 | MS.gene06699:CDS |
| CTCTGATCAGCAACAGCTTT+TGG | 0.287618 | 3.3:-76406213 | None:intergenic |
| GAGCTAGAGCTTTGGATGAT+TGG | 0.301964 | 3.3:+76408096 | MS.gene06699:CDS |
| TCTTCCTCTCCTGCCTCAAC+AGG | 0.311176 | 3.3:-76406533 | None:intergenic |
| GGTTGTGCTGATATCCTCTT+TGG | 0.321034 | 3.3:-76405045 | None:intergenic |
| TTGGAATACTAGCATATCTT+TGG | 0.334027 | 3.3:+76406883 | MS.gene06699:CDS |
| AACACCAACCACTGATATTT+GGG | 0.339739 | 3.3:+76407604 | MS.gene06699:CDS |
| ATTGGCTTCTTCAATGAATC+TGG | 0.346117 | 3.3:-76407997 | None:intergenic |
| ATCATTGTGCCAAGATGAAT+TGG | 0.351143 | 3.3:-76408015 | None:intergenic |
| CTGCCTCAACAGGGGTGGAC+AGG | 0.380810 | 3.3:-76406523 | None:intergenic |
| GATGGAGGACATGCCGTTAC+CGG | 0.383115 | 3.3:+76404791 | MS.gene06699:CDS |
| TACCTTCGCTCAAGATGTTC+TGG | 0.387841 | 3.3:+76407545 | MS.gene06699:CDS |
| CATATCTTTGGCAATCTGTA+AGG | 0.394600 | 3.3:+76406895 | MS.gene06699:CDS |
| ATTCATCTTGGCACAATGAT+AGG | 0.398345 | 3.3:+76408018 | MS.gene06699:CDS |
| GGCAGGAGAGGAAGAACTAT+TGG | 0.402541 | 3.3:+76406541 | MS.gene06699:CDS |
| CTTCCATTCACAAGACTTTG+TGG | 0.409118 | 3.3:-76407627 | None:intergenic |
| GAGAGCAAGAATGGCAGCTC+AGG | 0.410453 | 3.3:+76407662 | MS.gene06699:CDS |
| CCATGTTTAGGATGGGGATC+AGG | 0.419549 | 3.3:+76407413 | MS.gene06699:intron |
| GATAAATATGTACCTATGAC+TGG | 0.430417 | 3.3:-76407694 | None:intergenic |
| CTGTCCACCCCTGTTGAGGC+AGG | 0.437775 | 3.3:+76406524 | MS.gene06699:CDS |
| AGGTCTTCCAACCCAGTCAT+AGG | 0.441903 | 3.3:+76407682 | MS.gene06699:CDS |
| TACAAATGAGAGAGCAAGAA+TGG | 0.443576 | 3.3:+76407653 | MS.gene06699:CDS |
| TTGAAGAAGCCAATTCATCT+TGG | 0.455058 | 3.3:+76408006 | MS.gene06699:CDS |
| CACGCCACCGCCACTGAGTC+CGG | 0.455804 | 3.3:+76404840 | MS.gene06699:CDS |
| GCCTGGGAAGCCTTTAGAAT+CGG | 0.455958 | 3.3:-76405970 | None:intergenic |
| TCATCCTCCTCCTCTTCACC+TGG | 0.457933 | 3.3:-76408050 | None:intergenic |
| TGCCCTGTCCACCCCTGTTG+AGG | 0.460057 | 3.3:+76406520 | MS.gene06699:CDS |
| GGAAGCAGGACTAAAAGAAA+TGG | 0.466493 | 3.3:+76407944 | MS.gene06699:CDS |
| GATGATAATCCGCGGGGTGC+CGG | 0.475557 | 3.3:+76408122 | MS.gene06699:CDS |
| CTCTCCTGCCTCAACAGGGG+TGG | 0.490362 | 3.3:-76406528 | None:intergenic |
| CAAAAGCTGTTGCTGATCAG+AGG | 0.494147 | 3.3:+76406214 | MS.gene06699:CDS |
| TCTGGAAATGATTAAGAAAG+AGG | 0.495866 | 3.3:+76407009 | MS.gene06699:CDS |
| TGACGGAGAAGAAGAAAGAG+AGG | 0.495976 | 3.3:+76406568 | MS.gene06699:CDS |
| TGCCTCAACAGGGGTGGACA+GGG | 0.499117 | 3.3:-76406522 | None:intergenic |
| TCCGATGGGTGAGATGAAGA+TGG | 0.501968 | 3.3:+76404773 | None:intergenic |
| GTCAACTCAGCAAGATAATA+CGG | 0.507251 | 3.3:-76405919 | None:intergenic |
| ACCGATTCTAAAGGCTTCCC+AGG | 0.508228 | 3.3:+76405969 | MS.gene06699:CDS |
| TGAAGATGACGATGCTGCAC+AGG | 0.511553 | 3.3:+76408070 | MS.gene06699:CDS |
| TGTTCAGGAGCTTGTCAAGA+AGG | 0.513400 | 3.3:+76404956 | MS.gene06699:intron |
| GGGCCACAAAGTCTTGTGAA+TGG | 0.518210 | 3.3:+76407624 | MS.gene06699:CDS |
| GAAAACATGATTAATAGGCT+TGG | 0.519278 | 3.3:+76405002 | MS.gene06699:CDS |
| GGAGATGCTTTCTGCTGTAA+AGG | 0.520685 | 3.3:+76407033 | MS.gene06699:CDS |
| AAATGGAAATTATGAATACA+TGG | 0.530525 | 3.3:+76407961 | MS.gene06699:CDS |
| TGCTGATCAGAGGGCCAGAA+AGG | 0.530837 | 3.3:+76406224 | MS.gene06699:CDS |
| CTTCCTCTCCTGCCTCAACA+GGG | 0.530933 | 3.3:-76406532 | None:intergenic |
| AATTCGAAGCTTACCCCTTG+CGG | 0.531093 | 3.3:+76408146 | MS.gene06699:CDS |
| AGAAAATAGCACATGATGAC+AGG | 0.531695 | 3.3:+76405944 | MS.gene06699:CDS |
| TGCTTCCTCAATGCTCATAG+TGG | 0.531761 | 3.3:-76407928 | None:intergenic |
| ACAGGATAGAGCTAGAGCTT+TGG | 0.535946 | 3.3:+76408088 | MS.gene06699:CDS |
| TAGAGCTTTGGATGATTGGA+AGG | 0.539728 | 3.3:+76408100 | MS.gene06699:CDS |
| GTTCAGGAGCTTGTCAAGAA+GGG | 0.541089 | 3.3:+76404957 | MS.gene06699:intron |
| GAAGTTTAAGCCAGGTGAAG+AGG | 0.541846 | 3.3:+76408040 | MS.gene06699:CDS |
| GAAACGAAAGCGTACTTGGT+CGG | 0.545373 | 3.3:-76404865 | None:intergenic |
| TAAGCCAGGTGAAGAGGAGG+AGG | 0.545443 | 3.3:+76408046 | MS.gene06699:CDS |
| GGCACCGGACTCAGTGGCGG+TGG | 0.546659 | 3.3:-76404844 | None:intergenic |
| CGGACTCAGTGGCGGTGGCG+TGG | 0.550530 | 3.3:-76404839 | None:intergenic |
| ATATGTACCTATGACTGGGT+TGG | 0.554490 | 3.3:-76407689 | None:intergenic |
| GCGAAGGTAGCACATGTGAT+TGG | 0.558292 | 3.3:-76407531 | None:intergenic |
| CACCCCTGTTGAGGCAGGAG+AGG | 0.559655 | 3.3:+76406529 | MS.gene06699:CDS |
| ATAGATTCAATTAGCCGCAA+GGG | 0.564088 | 3.3:-76408160 | None:intergenic |
| CTTGCTTGTTCAAACAGCGC+CGG | 0.565472 | 3.3:-76404810 | None:intergenic |
| GCTTCCTCAATGCTCATAGT+GGG | 0.565665 | 3.3:-76407927 | None:intergenic |
| AAAGCGTACTTGGTCGGCAC+CGG | 0.566041 | 3.3:-76404859 | None:intergenic |
| GATGGAGCTGGTCCCAAAAG+AGG | 0.566346 | 3.3:+76406164 | MS.gene06699:CDS |
| TCCATCTTCATCTCACCCAT+CGG | 0.567407 | 3.3:-76404774 | None:intergenic |
| TTGGAAGGATGATAATCCGC+GGG | 0.569064 | 3.3:+76408115 | MS.gene06699:CDS |
| TGTTCAAACAGCGCCGGTAA+CGG | 0.569938 | 3.3:-76404804 | None:intergenic |
| CTCTGCTAATGAAACCAAAG+AGG | 0.570061 | 3.3:+76405031 | MS.gene06699:CDS |
| TTCCAGAACATCTTGAGCGA+AGG | 0.571431 | 3.3:-76407547 | None:intergenic |
| GCACATGTGATTGGTGGAGA+TGG | 0.572371 | 3.3:-76407522 | None:intergenic |
| TGACAGGATACCGATTCTAA+AGG | 0.573766 | 3.3:+76405960 | MS.gene06699:CDS |
| AGTTAGAATCTTATATGCAA+GGG | 0.574858 | 3.3:+76406187 | MS.gene06699:CDS |
| AAGGTAGCACATGTGATTGG+TGG | 0.577338 | 3.3:-76407528 | None:intergenic |
| GAGTTAGAATCTTATATGCA+AGG | 0.580289 | 3.3:+76406186 | MS.gene06699:CDS |
| GTTAGAAATAAACGAGCGAA+AGG | 0.582445 | 3.3:+76406469 | MS.gene06699:CDS |
| CGGCGCTGTTTGAACAAGCA+AGG | 0.583327 | 3.3:+76404811 | MS.gene06699:CDS |
| GTTTAAGCCAGGTGAAGAGG+AGG | 0.583570 | 3.3:+76408043 | MS.gene06699:CDS |
| GGCTTCCCAGGCAAAACTGA+AGG | 0.587652 | 3.3:+76405981 | MS.gene06699:CDS |
| TGTAAAGGATAGACAATCCA+AGG | 0.589440 | 3.3:+76407048 | MS.gene06699:CDS |
| TTTGTGTTCGTGTGCTTGCG+AGG | 0.589889 | 3.3:-76407583 | None:intergenic |
| AAAAGCTGTTGCTGATCAGA+GGG | 0.591137 | 3.3:+76406215 | MS.gene06699:CDS |
| GGAAATGATTAAGAAAGAGG+AGG | 0.591992 | 3.3:+76407012 | MS.gene06699:CDS |
| AACCGATCTCAAGTACATCC+TGG | 0.592669 | 3.3:+76405064 | MS.gene06699:CDS |
| GTGGCCCAAATATCAGTGGT+TGG | 0.592707 | 3.3:-76407608 | None:intergenic |
| ACTATGAGCATTGAGGAAGC+AGG | 0.594997 | 3.3:+76407930 | MS.gene06699:CDS |
| TTCCTCTCCTGCCTCAACAG+GGG | 0.599086 | 3.3:-76406531 | None:intergenic |
| TACCAGGATGTACTTGAGAT+CGG | 0.603064 | 3.3:-76405066 | None:intergenic |
| AATGATAGGAAGTTTAAGCC+AGG | 0.610210 | 3.3:+76408032 | MS.gene06699:CDS |
| AAATAAACGAGCGAAAGGAA+CGG | 0.614011 | 3.3:+76406474 | MS.gene06699:CDS |
| AATAGATTCAATTAGCCGCA+AGG | 0.614970 | 3.3:-76408161 | None:intergenic |
| GAAGAACTATTGGAAGATGA+CGG | 0.618639 | 3.3:+76406551 | MS.gene06699:CDS |
| ATAAATATGTACCTATGACT+GGG | 0.627631 | 3.3:-76407693 | None:intergenic |
| TTCGCTCAAGATGTTCTGGA+AGG | 0.633258 | 3.3:+76407549 | MS.gene06699:CDS |
| GTCGGCACCGGACTCAGTGG+CGG | 0.633971 | 3.3:-76404847 | None:intergenic |
| ACGAGCGAAAGGAACGGCGT+GGG | 0.637909 | 3.3:+76406480 | MS.gene06699:CDS |
| GTTAGAATCTTATATGCAAG+GGG | 0.638453 | 3.3:+76406188 | MS.gene06699:CDS |
| CTTTGTGGCCCAAATATCAG+TGG | 0.638531 | 3.3:-76407612 | None:intergenic |
| GATGCCCACTATGAGCATTG+AGG | 0.648707 | 3.3:+76407923 | MS.gene06699:CDS |
| TTGGTCGGCACCGGACTCAG+TGG | 0.649187 | 3.3:-76404850 | None:intergenic |
| TTCGAATTTCCGGCACCCCG+CGG | 0.649460 | 3.3:-76408131 | None:intergenic |
| TAGATTCAATTAGCCGCAAG+GGG | 0.654034 | 3.3:-76408159 | None:intergenic |
| AACGAGCGAAAGGAACGGCG+TGG | 0.663839 | 3.3:+76406479 | MS.gene06699:CDS |
| ATTGGAAGGATGATAATCCG+CGG | 0.675321 | 3.3:+76408114 | MS.gene06699:CDS |
| GCTTGTCAAGAAGGGATGCG+AGG | 0.685734 | 3.3:+76404965 | MS.gene06699:CDS |
| GATGGGTGAGATGAAGATGG+AGG | 0.688122 | 3.3:+76404776 | None:intergenic |
| TGGAAGGATGATAATCCGCG+GGG | 0.769686 | 3.3:+76408116 | MS.gene06699:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAGTTTAAACAAAG+TGG | - | chr3.3:76406945-76406964 | None:intergenic | 15.0% |
| !! | TAATATTGAAGAAATTAACA+AGG | - | chr3.3:76406072-76406091 | None:intergenic | 15.0% |
| !!! | TTACTGAAAACATTTTTTTT+AGG | + | chr3.3:76406119-76406138 | MS.gene06699:intron | 15.0% |
| !! | AAATGGAAATTATGAATACA+TGG | + | chr3.3:76407961-76407980 | MS.gene06699:CDS | 20.0% |
| !! | AAATGTGCATTTATTGATAA+AGG | - | chr3.3:76407721-76407740 | None:intergenic | 20.0% |
| !! | AATCCTAATGTGTATTAATA+TGG | + | chr3.3:76405749-76405768 | MS.gene06699:intron | 20.0% |
| !! | AATGTGCATTTATTGATAAA+GGG | - | chr3.3:76407720-76407739 | None:intergenic | 20.0% |
| !! | ATCCTAATGTGTATTAATAT+GGG | + | chr3.3:76405750-76405769 | MS.gene06699:intron | 20.0% |
| !! | GATAACAAAAAATTGGTAAA+TGG | - | chr3.3:76405886-76405905 | None:intergenic | 20.0% |
| !! | TAGTAAGTCTAGTTATTATA+AGG | + | chr3.3:76405245-76405264 | MS.gene06699:intron | 20.0% |
| !! | TTATATTTCGATTATTCTCA+TGG | + | chr3.3:76406957-76406976 | MS.gene06699:intron | 20.0% |
| !! | TTTCATAACAAGTGAATAAT+GGG | - | chr3.3:76406330-76406349 | None:intergenic | 20.0% |
| !!! | GTTTTATATTGCCATAATTA+TGG | + | chr3.3:76407142-76407161 | MS.gene06699:intron | 20.0% |
| !!! | TTTTCATAACAAGTGAATAA+TGG | - | chr3.3:76406331-76406350 | None:intergenic | 20.0% |
| ! | AATAAAACACGATTACACAA+TGG | + | chr3.3:76405560-76405579 | MS.gene06699:intron | 25.0% |
| ! | AATAAAAGTTAAGTTCTACC+AGG | - | chr3.3:76407226-76407245 | None:intergenic | 25.0% |
| ! | AATGCGAAAACATGATTAAT+AGG | + | chr3.3:76404997-76405016 | MS.gene06699:CDS | 25.0% |
| ! | ACTAAATAAAGTAGCAGTAA+TGG | - | chr3.3:76406617-76406636 | None:intergenic | 25.0% |
| ! | AGGGAATGATAACAAAAAAT+TGG | - | chr3.3:76405893-76405912 | None:intergenic | 25.0% |
| ! | AGTTAGAATCTTATATGCAA+GGG | + | chr3.3:76406187-76406206 | MS.gene06699:CDS | 25.0% |
| ! | ATAAAACACGATTACACAAT+GGG | + | chr3.3:76405561-76405580 | MS.gene06699:intron | 25.0% |
| ! | ATAAATATGTACCTATGACT+GGG | - | chr3.3:76407696-76407715 | None:intergenic | 25.0% |
| ! | ATGTGCATTTATTGATAAAG+GGG | - | chr3.3:76407719-76407738 | None:intergenic | 25.0% |
| ! | ATTATGGCAATATAAAACAG+TGG | - | chr3.3:76407140-76407159 | None:intergenic | 25.0% |
| ! | CTTCAATATTCTGTACTTAA+AGG | - | chr3.3:76405833-76405852 | None:intergenic | 25.0% |
| ! | GAAAACAAATAATGAAGAAG+AGG | - | chr3.3:76404898-76404917 | None:intergenic | 25.0% |
| ! | TTATATTGCCATAATTATGG+TGG | + | chr3.3:76407145-76407164 | MS.gene06699:intron | 25.0% |
| ! | TTCCCATATTAATACACATT+AGG | - | chr3.3:76405755-76405774 | None:intergenic | 25.0% |
| ! | TTCTACTAGATTTCTATGTT+TGG | - | chr3.3:76405521-76405540 | None:intergenic | 25.0% |
| ! | TTTCAGTAAGCTTCAATAAA+AGG | - | chr3.3:76406108-76406127 | None:intergenic | 25.0% |
| !! | ATTGAACTTCATTTTCTTTC+AGG | - | chr3.3:76407805-76407824 | None:intergenic | 25.0% |
| !! | CACATTTCACTTGATAATTA+TGG | + | chr3.3:76407260-76407279 | MS.gene06699:intron | 25.0% |
| !!! | ATTACTGCTACTTTATTTAG+TGG | + | chr3.3:76406616-76406635 | MS.gene06699:intron | 25.0% |
| !!! | TGAGTTGAATATTTTGTTGA+AGG | + | chr3.3:76407901-76407920 | MS.gene06699:intron | 25.0% |
| !!! | TTACTGCTACTTTATTTAGT+GGG | + | chr3.3:76406617-76406636 | MS.gene06699:intron | 25.0% |
| !!! | TTATTTTTCTTCTCCTTTTC+AGG | + | chr3.3:76406859-76406878 | MS.gene06699:intron | 25.0% |
| AAAGATCTCAACCACAATAA+TGG | - | chr3.3:76407109-76407128 | None:intergenic | 30.0% | |
| AAAGATCTCCACCATAATTA+TGG | - | chr3.3:76407156-76407175 | None:intergenic | 30.0% | |
| AAGCTAGTCCAATAATATGT+AGG | - | chr3.3:76406745-76406764 | None:intergenic | 30.0% | |
| AATGCACATTTCTTAGCTAA+TGG | + | chr3.3:76407730-76407749 | MS.gene06699:intron | 30.0% | |
| ACTAGTTGTTGCACATATTT+AGG | - | chr3.3:76405669-76405688 | None:intergenic | 30.0% | |
| ATAATATGTAGGACTGCTAT+AGG | - | chr3.3:76406734-76406753 | None:intergenic | 30.0% | |
| ATAGCAGTCCTACATATTAT+TGG | + | chr3.3:76406734-76406753 | MS.gene06699:intron | 30.0% | |
| CTGTGCAATTTATTGTAATG+CGG | + | chr3.3:76405413-76405432 | MS.gene06699:intron | 30.0% | |
| CTTAAAGAACTGTTATAACC+TGG | + | chr3.3:76407205-76407224 | MS.gene06699:intron | 30.0% | |
| GAAAACATGATTAATAGGCT+TGG | + | chr3.3:76405002-76405021 | MS.gene06699:CDS | 30.0% | |
| GAGTTAGAATCTTATATGCA+AGG | + | chr3.3:76406186-76406205 | MS.gene06699:CDS | 30.0% | |
| GATAAATATGTACCTATGAC+TGG | - | chr3.3:76407697-76407716 | None:intergenic | 30.0% | |
| GGAATGAGTATAAAAATCCA+AGG | + | chr3.3:76405295-76405314 | MS.gene06699:intron | 30.0% | |
| GGAGAAGAAAAATAAGTGAA+TGG | - | chr3.3:76406854-76406873 | None:intergenic | 30.0% | |
| GTTAGAATCTTATATGCAAG+GGG | + | chr3.3:76406188-76406207 | MS.gene06699:CDS | 30.0% | |
| TCTGGAAATGATTAAGAAAG+AGG | + | chr3.3:76407009-76407028 | MS.gene06699:CDS | 30.0% | |
| TTAGAACAACAAAACTGCAA+GGG | - | chr3.3:76407829-76407848 | None:intergenic | 30.0% | |
| TTCATGATTGTGATAGAAAC+TGG | + | chr3.3:76405493-76405512 | MS.gene06699:intron | 30.0% | |
| TTGGAATACTAGCATATCTT+TGG | + | chr3.3:76406883-76406902 | MS.gene06699:CDS | 30.0% | |
| TTGTGTTCTTAAGAGATGTT+TGG | + | chr3.3:76405449-76405468 | MS.gene06699:intron | 30.0% | |
| ! | AAGATTCTAACTCCTCTTTT+GGG | - | chr3.3:76406179-76406198 | None:intergenic | 30.0% |
| ! | AATTATGGTGGAGATCTTTA+TGG | + | chr3.3:76407157-76407176 | MS.gene06699:intron | 30.0% |
| ! | ATTATGGTGGAGATCTTTAT+GGG | + | chr3.3:76407158-76407177 | MS.gene06699:intron | 30.0% |
| ! | CTAGCTTGTGATTTATGAAA+TGG | + | chr3.3:76406758-76406777 | MS.gene06699:intron | 30.0% |
| ! | CTTGATAATTATGGAATACC+AGG | + | chr3.3:76407269-76407288 | MS.gene06699:intron | 30.0% |
| ! | CTTGTAATTTTGCCATGTTT+AGG | + | chr3.3:76407401-76407420 | MS.gene06699:intron | 30.0% |
| ! | GGAATTTATCTCATTTTGTG+AGG | + | chr3.3:76406140-76406159 | MS.gene06699:intron | 30.0% |
| ! | TAAATTTTTCCAGTCTCACT+CGG | - | chr3.3:76405632-76405651 | None:intergenic | 30.0% |
| ! | TAAGATTCTAACTCCTCTTT+TGG | - | chr3.3:76406180-76406199 | None:intergenic | 30.0% |
| ! | TAATTTTGCCATGTTTAGGA+TGG | + | chr3.3:76407405-76407424 | MS.gene06699:intron | 30.0% |
| ! | TACTAAGCATTTTACTACCT+TGG | - | chr3.3:76407068-76407087 | None:intergenic | 30.0% |
| ! | TGTGCATATAGTGTTGAATT+GGG | - | chr3.3:76406047-76406066 | None:intergenic | 30.0% |
| ! | TTGTGCATATAGTGTTGAAT+TGG | - | chr3.3:76406048-76406067 | None:intergenic | 30.0% |
| !! | AATTTTGCCATGTTTAGGAT+GGG | + | chr3.3:76407406-76407425 | MS.gene06699:intron | 30.0% |
| !! | GGAGTTTTCTAAGGATATTA+TGG | + | chr3.3:76407434-76407453 | MS.gene06699:CDS | 30.0% |
| !! | GTTCTGCTTTAAAGAAGAAT+GGG | + | chr3.3:76407331-76407350 | MS.gene06699:intron | 30.0% |
| !! | TAATGGAAAGCTTTGGAATA+GGG | + | chr3.3:76407747-76407766 | MS.gene06699:intron | 30.0% |
| !! | TGTTCTGCTTTAAAGAAGAA+TGG | + | chr3.3:76407330-76407349 | MS.gene06699:intron | 30.0% |
| !! | TTCTTCTTTAAAGCAGAACA+TGG | - | chr3.3:76407330-76407349 | None:intergenic | 30.0% |
| !!! | GGAAATTGTTTTTTTTCTGC+GGG | + | chr3.3:76407352-76407371 | MS.gene06699:intron | 30.0% |
| !!! | GGGAAATTGTTTTTTTTCTG+CGG | + | chr3.3:76407351-76407370 | MS.gene06699:intron | 30.0% |
| !!! | TTTTTTGTTATCATTCCCTC+AGG | + | chr3.3:76405894-76405913 | MS.gene06699:intron | 30.0% |
| AAACACCAACCACTGATATT+TGG | + | chr3.3:76407603-76407622 | MS.gene06699:CDS | 35.0% | |
| AAATAAACGAGCGAAAGGAA+CGG | + | chr3.3:76406474-76406493 | MS.gene06699:CDS | 35.0% | |
| AACACCAACCACTGATATTT+GGG | + | chr3.3:76407604-76407623 | MS.gene06699:CDS | 35.0% | |
| AAGAAAACATGACACCTTTC+TGG | - | chr3.3:76406241-76406260 | None:intergenic | 35.0% | |
| AATCAATCAATCGAAAAGCG+TGG | - | chr3.3:76405115-76405134 | None:intergenic | 35.0% | |
| AATGATAGGAAGTTTAAGCC+AGG | + | chr3.3:76408032-76408051 | MS.gene06699:CDS | 35.0% | |
| ACAATAATGGTACTTCGGTA+AGG | - | chr3.3:76407096-76407115 | None:intergenic | 35.0% | |
| AGAAAATAGCACATGATGAC+AGG | + | chr3.3:76405944-76405963 | MS.gene06699:CDS | 35.0% | |
| ATCATTGTGCCAAGATGAAT+TGG | - | chr3.3:76408018-76408037 | None:intergenic | 35.0% | |
| ATGGTTGTCTTGAAATGTTC+AGG | + | chr3.3:76406976-76406995 | MS.gene06699:intron | 35.0% | |
| ATTCATCTTGGCACAATGAT+AGG | + | chr3.3:76408018-76408037 | MS.gene06699:CDS | 35.0% | |
| ATTGATCCTCTATCATTCCT+AGG | - | chr3.3:76407852-76407871 | None:intergenic | 35.0% | |
| CAACCACAATAATGGTACTT+CGG | - | chr3.3:76407101-76407120 | None:intergenic | 35.0% | |
| CATATCTTTGGCAATCTGTA+AGG | + | chr3.3:76406895-76406914 | MS.gene06699:CDS | 35.0% | |
| CTATCACAATCATGAACCAT+CGG | - | chr3.3:76405489-76405508 | None:intergenic | 35.0% | |
| GAAGAACTATTGGAAGATGA+CGG | + | chr3.3:76406551-76406570 | MS.gene06699:CDS | 35.0% | |
| GGAAATGATTAAGAAAGAGG+AGG | + | chr3.3:76407012-76407031 | MS.gene06699:CDS | 35.0% | |
| GGATTTATCGACCATTAGAT+GGG | + | chr3.3:76406687-76406706 | MS.gene06699:intron | 35.0% | |
| GTCAACTCAGCAAGATAATA+CGG | - | chr3.3:76405922-76405941 | None:intergenic | 35.0% | |
| GTGTATTAATATGGGAAAGC+TGG | + | chr3.3:76405758-76405777 | MS.gene06699:intron | 35.0% | |
| GTTAGAAATAAACGAGCGAA+AGG | + | chr3.3:76406469-76406488 | MS.gene06699:CDS | 35.0% | |
| GTTAGAACAACAAAACTGCA+AGG | - | chr3.3:76407830-76407849 | None:intergenic | 35.0% | |
| TAAAGGTCACATGGGAATAT+GGG | - | chr3.3:76405816-76405835 | None:intergenic | 35.0% | |
| TACAAATGAGAGAGCAAGAA+TGG | + | chr3.3:76407653-76407672 | MS.gene06699:CDS | 35.0% | |
| TCTGTACTTAAAGGTCACAT+GGG | - | chr3.3:76405824-76405843 | None:intergenic | 35.0% | |
| TCTTAGCTAATGGAAAGCTT+TGG | + | chr3.3:76407740-76407759 | MS.gene06699:intron | 35.0% | |
| TGCAAGCATGAATGATGTTT+GGG | - | chr3.3:76405589-76405608 | None:intergenic | 35.0% | |
| TGGATTTATCGACCATTAGA+TGG | + | chr3.3:76406686-76406705 | MS.gene06699:intron | 35.0% | |
| TGTAAAGGATAGACAATCCA+AGG | + | chr3.3:76407048-76407067 | MS.gene06699:CDS | 35.0% | |
| TTAAAGGTCACATGGGAATA+TGG | - | chr3.3:76405817-76405836 | None:intergenic | 35.0% | |
| TTCTAACCTAGGAATGATAG+AGG | + | chr3.3:76407843-76407862 | MS.gene06699:intron | 35.0% | |
| TTCTGTACTTAAAGGTCACA+TGG | - | chr3.3:76405825-76405844 | None:intergenic | 35.0% | |
| TTGAAGAAGCCAATTCATCT+TGG | + | chr3.3:76408006-76408025 | MS.gene06699:CDS | 35.0% | |
| TTGCAAGCATGAATGATGTT+TGG | - | chr3.3:76405590-76405609 | None:intergenic | 35.0% | |
| ! | AATTTTACATGCACCGAAGA+TGG | - | chr3.3:76405329-76405348 | None:intergenic | 35.0% |
| ! | ATAGTGTTGAATTGGGTGTT+GGG | - | chr3.3:76406040-76406059 | None:intergenic | 35.0% |
| ! | ATTGGCTTCTTCAATGAATC+TGG | - | chr3.3:76408000-76408019 | None:intergenic | 35.0% |
| ! | CAGGCAAAAACACATTTTCA+GGG | - | chr3.3:76406665-76406684 | None:intergenic | 35.0% |
| ! | CATTAGATGGGCTTAAAAGT+AGG | + | chr3.3:76406699-76406718 | MS.gene06699:intron | 35.0% |
| ! | GTGATTTATGAAATGGACTC+TGG | + | chr3.3:76406765-76406784 | MS.gene06699:intron | 35.0% |
| ! | TATAGTGTTGAATTGGGTGT+TGG | - | chr3.3:76406041-76406060 | None:intergenic | 35.0% |
| ! | TCAGGCATAAAGTCTTTTGA+TGG | - | chr3.3:76407787-76407806 | None:intergenic | 35.0% |
| ! | TTACCGAAGTACCATTATTG+TGG | + | chr3.3:76407095-76407114 | MS.gene06699:intron | 35.0% |
| !! | AAAACACATTTTCAGGGAAG+CGG | - | chr3.3:76406659-76406678 | None:intergenic | 35.0% |
| !! | ATTTTGCCATGTTTAGGATG+GGG | + | chr3.3:76407407-76407426 | MS.gene06699:intron | 35.0% |
| !! | CTAATGGAAAGCTTTGGAAT+AGG | + | chr3.3:76407746-76407765 | MS.gene06699:intron | 35.0% |
| !! | CTACTTTTAAGCCCATCTAA+TGG | - | chr3.3:76406701-76406720 | None:intergenic | 35.0% |
| !! | GAGTTGTGTGTAATTTGTTC+AGG | + | chr3.3:76404941-76404960 | MS.gene06699:intron | 35.0% |
| !!! | CAGTTTTGTTGTTCTAACCT+AGG | + | chr3.3:76407832-76407851 | MS.gene06699:intron | 35.0% |
| !!! | GTCATCATGTGCTATTTTCT+CGG | - | chr3.3:76405944-76405963 | None:intergenic | 35.0% |
| AAAAGCTGTTGCTGATCAGA+GGG | + | chr3.3:76406215-76406234 | MS.gene06699:CDS | 40.0% | |
| ATATGTACCTATGACTGGGT+TGG | - | chr3.3:76407692-76407711 | None:intergenic | 40.0% | |
| ATTAATATGGGAAAGCTGGC+TGG | + | chr3.3:76405762-76405781 | MS.gene06699:intron | 40.0% | |
| ATTGGAAGGATGATAATCCG+CGG | + | chr3.3:76408114-76408133 | MS.gene06699:CDS | 40.0% | |
| CATCTATATGTCTCAAAGCC+TGG | - | chr3.3:76407290-76407309 | None:intergenic | 40.0% | |
| CTAGTATTCCAAGCCTGAAA+AGG | - | chr3.3:76406875-76406894 | None:intergenic | 40.0% | |
| CTCTGCTAATGAAACCAAAG+AGG | + | chr3.3:76405031-76405050 | MS.gene06699:CDS | 40.0% | |
| CTTCCATTCACAAGACTTTG+TGG | - | chr3.3:76407630-76407649 | None:intergenic | 40.0% | |
| GGAAGCAGGACTAAAAGAAA+TGG | + | chr3.3:76407944-76407963 | MS.gene06699:CDS | 40.0% | |
| GGGCTTAAAAGTAGGTTTGT+GGG | + | chr3.3:76406707-76406726 | MS.gene06699:intron | 40.0% | |
| TAATGGTACTTCGGTAAGGA+AGG | - | chr3.3:76407092-76407111 | None:intergenic | 40.0% | |
| TAATGGTCGATAAATCCACC+AGG | - | chr3.3:76406684-76406703 | None:intergenic | 40.0% | |
| TACCAGGATGTACTTGAGAT+CGG | - | chr3.3:76405069-76405088 | None:intergenic | 40.0% | |
| TGGGCTTAAAAGTAGGTTTG+TGG | + | chr3.3:76406706-76406725 | MS.gene06699:intron | 40.0% | |
| TGTTCAGGCATTTGATCTTC+TGG | + | chr3.3:76406991-76407010 | MS.gene06699:intron | 40.0% | |
| TTAAGTAAACCGAGTGAGAC+TGG | + | chr3.3:76405620-76405639 | MS.gene06699:intron | 40.0% | |
| TTATTGTAATGCGGTCACTG+TGG | + | chr3.3:76405422-76405441 | MS.gene06699:intron | 40.0% | |
| ! | AAGAGAAACGAAAGCGTACT+TGG | - | chr3.3:76404872-76404891 | None:intergenic | 40.0% |
| ! | CCAGGCAAAAACACATTTTC+AGG | - | chr3.3:76406666-76406685 | None:intergenic | 40.0% |
| ! | TAGTGTTGAATTGGGTGTTG+GGG | - | chr3.3:76406039-76406058 | None:intergenic | 40.0% |
| ! | TATCTCATTTTGTGAGGCGA+TGG | + | chr3.3:76406146-76406165 | MS.gene06699:CDS | 40.0% |
| !! | CCTGAAAATGTGTTTTTGCC+TGG | + | chr3.3:76406663-76406682 | MS.gene06699:intron | 40.0% |
| !! | GAAAATGTGTTTTTGCCTGG+TGG | + | chr3.3:76406666-76406685 | MS.gene06699:intron | 40.0% |
| !! | GAAGCATAAGAAGAAGTACC+AGG | - | chr3.3:76405085-76405104 | None:intergenic | 40.0% |
| !! | TAGAGCTTTGGATGATTGGA+AGG | + | chr3.3:76408100-76408119 | MS.gene06699:CDS | 40.0% |
| !! | TGACAGGATACCGATTCTAA+AGG | + | chr3.3:76405960-76405979 | MS.gene06699:CDS | 40.0% |
| !! | TTATTTTGCTGATAGCCGCA+CGG | + | chr3.3:76405268-76405287 | MS.gene06699:intron | 40.0% |
| !! | TTTCTTCTCCTTTTCAGGCT+TGG | + | chr3.3:76406864-76406883 | MS.gene06699:intron | 40.0% |
| !!! | ATGCCAAGCTTCTGCTTTTT+TGG | - | chr3.3:76407469-76407488 | None:intergenic | 40.0% |
| AAACCGAATGCTGAAGCTTG+GGG | + | chr3.3:76405365-76405384 | MS.gene06699:intron | 45.0% | |
| AACCGATCTCAAGTACATCC+TGG | + | chr3.3:76405064-76405083 | MS.gene06699:CDS | 45.0% | |
| AAGGTAGCACATGTGATTGG+TGG | - | chr3.3:76407531-76407550 | None:intergenic | 45.0% | |
| AATTCGAAGCTTACCCCTTG+CGG | + | chr3.3:76408146-76408165 | MS.gene06699:CDS | 45.0% | |
| ACAGGATAGAGCTAGAGCTT+TGG | + | chr3.3:76408088-76408107 | MS.gene06699:CDS | 45.0% | |
| AGAAACCGAATGCTGAAGCT+TGG | + | chr3.3:76405363-76405382 | MS.gene06699:intron | 45.0% | |
| AGGGGTAAGCTTCGAATTTC+CGG | - | chr3.3:76408144-76408163 | None:intergenic | 45.0% | |
| CAAAAGCTGTTGCTGATCAG+AGG | + | chr3.3:76406214-76406233 | MS.gene06699:CDS | 45.0% | |
| CAAGATAATACGGCACCTGA+GGG | - | chr3.3:76405912-76405931 | None:intergenic | 45.0% | |
| CTTTGTGGCCCAAATATCAG+TGG | - | chr3.3:76407615-76407634 | None:intergenic | 45.0% | |
| GAAACCGAATGCTGAAGCTT+GGG | + | chr3.3:76405364-76405383 | MS.gene06699:intron | 45.0% | |
| GAAGTTTAAGCCAGGTGAAG+AGG | + | chr3.3:76408040-76408059 | MS.gene06699:CDS | 45.0% | |
| GCTTCCTCAATGCTCATAGT+GGG | - | chr3.3:76407930-76407949 | None:intergenic | 45.0% | |
| GGAGATGCTTTCTGCTGTAA+AGG | + | chr3.3:76407033-76407052 | MS.gene06699:CDS | 45.0% | |
| GTGAGAGCTGATCTGTTGAA+AGG | + | chr3.3:76406003-76406022 | MS.gene06699:intron | 45.0% | |
| GTGCCAAAAAAGCAGAAGCT+TGG | + | chr3.3:76407463-76407482 | MS.gene06699:CDS | 45.0% | |
| GTTCAGGAGCTTGTCAAGAA+GGG | + | chr3.3:76404957-76404976 | MS.gene06699:intron | 45.0% | |
| TACCTTCGCTCAAGATGTTC+TGG | + | chr3.3:76407545-76407564 | MS.gene06699:CDS | 45.0% | |
| TGACGGAGAAGAAGAAAGAG+AGG | + | chr3.3:76406568-76406587 | MS.gene06699:CDS | 45.0% | |
| TGCTTCCTCAATGCTCATAG+TGG | - | chr3.3:76407931-76407950 | None:intergenic | 45.0% | |
| TGTTCAGGAGCTTGTCAAGA+AGG | + | chr3.3:76404956-76404975 | MS.gene06699:intron | 45.0% | |
| TTCCAGAACATCTTGAGCGA+AGG | - | chr3.3:76407550-76407569 | None:intergenic | 45.0% | |
| TTGGAAGGATGATAATCCGC+GGG | + | chr3.3:76408115-76408134 | MS.gene06699:CDS | 45.0% | |
| ! | CTCTGATCAGCAACAGCTTT+TGG | - | chr3.3:76406216-76406235 | None:intergenic | 45.0% |
| ! | GAAACGAAAGCGTACTTGGT+CGG | - | chr3.3:76404868-76404887 | None:intergenic | 45.0% |
| ! | GAGATGTTTGGTAGCTTCCA+TGG | + | chr3.3:76405461-76405480 | MS.gene06699:intron | 45.0% |
| ! | GGTTGTGCTGATATCCTCTT+TGG | - | chr3.3:76405048-76405067 | None:intergenic | 45.0% |
| ! | TATTTTGCTGATAGCCGCAC+GGG | + | chr3.3:76405269-76405288 | MS.gene06699:intron | 45.0% |
| ! | TCTCACCTTCAGTTTTGCCT+GGG | - | chr3.3:76405989-76406008 | None:intergenic | 45.0% |
| ! | TGGGGATCAGGAGTTTTCTA+AGG | + | chr3.3:76407425-76407444 | MS.gene06699:CDS | 45.0% |
| ! | TTCGCTCAAGATGTTCTGGA+AGG | + | chr3.3:76407549-76407568 | MS.gene06699:CDS | 45.0% |
| !! | ACTATGAGCATTGAGGAAGC+AGG | + | chr3.3:76407930-76407949 | MS.gene06699:CDS | 45.0% |
| !! | AGTGTTGAATTGGGTGTTGG+GGG | - | chr3.3:76406038-76406057 | None:intergenic | 45.0% |
| !! | ATCATGAACCATCGGTTCCA+TGG | - | chr3.3:76405481-76405500 | None:intergenic | 45.0% |
| !! | GAGCTAGAGCTTTGGATGAT+TGG | + | chr3.3:76408096-76408115 | MS.gene06699:CDS | 45.0% |
| AGGTCTTCCAACCCAGTCAT+AGG | + | chr3.3:76407682-76407701 | MS.gene06699:CDS | 50.0% | |
| ATACTCATTCCCAACCCGTG+CGG | - | chr3.3:76405286-76405305 | None:intergenic | 50.0% | |
| CAACCCCAAGCTTCAGCATT+CGG | - | chr3.3:76405371-76405390 | None:intergenic | 50.0% | |
| CAAGGCTGTGACACCATCTT+CGG | + | chr3.3:76405313-76405332 | MS.gene06699:intron | 50.0% | |
| CCTGATCCCCATCCTAAACA+TGG | - | chr3.3:76407416-76407435 | None:intergenic | 50.0% | |
| CTTGCTTGTTCAAACAGCGC+CGG | - | chr3.3:76404813-76404832 | None:intergenic | 50.0% | |
| GCAAGATAATACGGCACCTG+AGG | - | chr3.3:76405913-76405932 | None:intergenic | 50.0% | |
| GCACATGTGATTGGTGGAGA+TGG | - | chr3.3:76407525-76407544 | None:intergenic | 50.0% | |
| GCGAAGGTAGCACATGTGAT+TGG | - | chr3.3:76407534-76407553 | None:intergenic | 50.0% | |
| GGCAGGAGAGGAAGAACTAT+TGG | + | chr3.3:76406541-76406560 | MS.gene06699:CDS | 50.0% | |
| GTGGCCCAAATATCAGTGGT+TGG | - | chr3.3:76407611-76407630 | None:intergenic | 50.0% | |
| GTTTAAGCCAGGTGAAGAGG+AGG | + | chr3.3:76408043-76408062 | MS.gene06699:CDS | 50.0% | |
| TGAAGATGACGATGCTGCAC+AGG | + | chr3.3:76408070-76408089 | MS.gene06699:CDS | 50.0% | |
| TGGAAGGATGATAATCCGCG+GGG | + | chr3.3:76408116-76408135 | MS.gene06699:CDS | 50.0% | |
| TTTGTGTTCGTGTGCTTGCG+AGG | - | chr3.3:76407586-76407605 | None:intergenic | 50.0% | |
| ! | ACCGATTCTAAAGGCTTCCC+AGG | + | chr3.3:76405969-76405988 | MS.gene06699:CDS | 50.0% |
| ! | ATTTTGTGAGGCGATGGAGC+TGG | + | chr3.3:76406152-76406171 | MS.gene06699:CDS | 50.0% |
| ! | CCATGTTTAGGATGGGGATC+AGG | + | chr3.3:76407413-76407432 | MS.gene06699:intron | 50.0% |
| ! | CTCTCACCTTCAGTTTTGCC+TGG | - | chr3.3:76405990-76406009 | None:intergenic | 50.0% |
| ! | GATGCCCACTATGAGCATTG+AGG | + | chr3.3:76407923-76407942 | MS.gene06699:CDS | 50.0% |
| ! | GGGCCACAAAGTCTTGTGAA+TGG | + | chr3.3:76407624-76407643 | MS.gene06699:CDS | 50.0% |
| !! | GCCTGGGAAGCCTTTAGAAT+CGG | - | chr3.3:76405973-76405992 | None:intergenic | 50.0% |
| !! | TGTTCAAACAGCGCCGGTAA+CGG | - | chr3.3:76404807-76404826 | None:intergenic | 50.0% |
| !! | TTGAATTGGGTGTTGGGGGA+AGG | - | chr3.3:76406034-76406053 | None:intergenic | 50.0% |
| AAAGCGTACTTGGTCGGCAC+CGG | - | chr3.3:76404862-76404881 | None:intergenic | 55.0% | |
| CGGCGCTGTTTGAACAAGCA+AGG | + | chr3.3:76404811-76404830 | MS.gene06699:CDS | 55.0% | |
| CTTCCTCTCCTGCCTCAACA+GGG | - | chr3.3:76406535-76406554 | None:intergenic | 55.0% | |
| GAGAGCAAGAATGGCAGCTC+AGG | + | chr3.3:76407662-76407681 | MS.gene06699:CDS | 55.0% | |
| GATGGAGCTGGTCCCAAAAG+AGG | + | chr3.3:76406164-76406183 | MS.gene06699:CDS | 55.0% | |
| GATGGAGGACATGCCGTTAC+CGG | + | chr3.3:76404791-76404810 | MS.gene06699:CDS | 55.0% | |
| GCTTGTCAAGAAGGGATGCG+AGG | + | chr3.3:76404965-76404984 | MS.gene06699:CDS | 55.0% | |
| GGCTTCCCAGGCAAAACTGA+AGG | + | chr3.3:76405981-76406000 | MS.gene06699:CDS | 55.0% | |
| GGTAGCTTCCATGGAACCGA+TGG | + | chr3.3:76405470-76405489 | MS.gene06699:intron | 55.0% | |
| TAAGCCAGGTGAAGAGGAGG+AGG | + | chr3.3:76408046-76408065 | MS.gene06699:CDS | 55.0% | |
| TCATCCTCCTCCTCTTCACC+TGG | - | chr3.3:76408053-76408072 | None:intergenic | 55.0% | |
| TCTTCCTCTCCTGCCTCAAC+AGG | - | chr3.3:76406536-76406555 | None:intergenic | 55.0% | |
| TGCTGATCAGAGGGCCAGAA+AGG | + | chr3.3:76406224-76406243 | MS.gene06699:CDS | 55.0% | |
| TTCCTCTCCTGCCTCAACAG+GGG | - | chr3.3:76406534-76406553 | None:intergenic | 55.0% | |
| !! | CGAAGATGGTGTCACAGCCT+TGG | - | chr3.3:76405315-76405334 | None:intergenic | 55.0% |
| !! | TGGCGTGATGAGCATTGAGC+AGG | - | chr3.3:76406834-76406853 | None:intergenic | 55.0% |
| AACGAGCGAAAGGAACGGCG+TGG | + | chr3.3:76406479-76406498 | MS.gene06699:CDS | 60.0% | |
| ACGAGCGAAAGGAACGGCGT+GGG | + | chr3.3:76406480-76406499 | MS.gene06699:CDS | 60.0% | |
| GATGATAATCCGCGGGGTGC+CGG | + | chr3.3:76408122-76408141 | MS.gene06699:CDS | 60.0% | |
| TGCCTCAACAGGGGTGGACA+GGG | - | chr3.3:76406525-76406544 | None:intergenic | 60.0% | |
| TGCTGATAGCCGCACGGGTT+GGG | + | chr3.3:76405274-76405293 | MS.gene06699:intron | 60.0% | |
| TTCGAATTTCCGGCACCCCG+CGG | - | chr3.3:76408134-76408153 | None:intergenic | 60.0% | |
| TTGCTGATAGCCGCACGGGT+TGG | + | chr3.3:76405273-76405292 | MS.gene06699:intron | 60.0% | |
| CACCCCTGTTGAGGCAGGAG+AGG | + | chr3.3:76406529-76406548 | MS.gene06699:CDS | 65.0% | |
| CTCTCCTGCCTCAACAGGGG+TGG | - | chr3.3:76406531-76406550 | None:intergenic | 65.0% | |
| CTGCCTCAACAGGGGTGGAC+AGG | - | chr3.3:76406526-76406545 | None:intergenic | 65.0% | |
| CTGTCCACCCCTGTTGAGGC+AGG | + | chr3.3:76406524-76406543 | MS.gene06699:CDS | 65.0% | |
| GGTGGACAGGGCAGCTGCTT+TGG | - | chr3.3:76406513-76406532 | None:intergenic | 65.0% | |
| TGCCCTGTCCACCCCTGTTG+AGG | + | chr3.3:76406520-76406539 | MS.gene06699:CDS | 65.0% | |
| ! | TTGGTCGGCACCGGACTCAG+TGG | - | chr3.3:76404853-76404872 | None:intergenic | 65.0% |
| CACGCCACCGCCACTGAGTC+CGG | + | chr3.3:76404840-76404859 | MS.gene06699:CDS | 70.0% | |
| ! | GTCGGCACCGGACTCAGTGG+CGG | - | chr3.3:76404850-76404869 | None:intergenic | 70.0% |
| CGGACTCAGTGGCGGTGGCG+TGG | - | chr3.3:76404842-76404861 | None:intergenic | 75.0% | |
| ! | GGCACCGGACTCAGTGGCGG+TGG | - | chr3.3:76404847-76404866 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 76404777 | 76408172 | 76404777 | ID=MS.gene06699 |
| chr3.3 | mRNA | 76404777 | 76408172 | 76404777 | ID=MS.gene06699.t1;Parent=MS.gene06699 |
| chr3.3 | exon | 76404777 | 76404872 | 76404777 | ID=MS.gene06699.t1.exon1;Parent=MS.gene06699.t1 |
| chr3.3 | CDS | 76404777 | 76404872 | 76404777 | ID=cds.MS.gene06699.t1;Parent=MS.gene06699.t1 |
| chr3.3 | exon | 76404963 | 76405085 | 76404963 | ID=MS.gene06699.t1.exon2;Parent=MS.gene06699.t1 |
| chr3.3 | CDS | 76404963 | 76405085 | 76404963 | ID=cds.MS.gene06699.t1;Parent=MS.gene06699.t1 |
| chr3.3 | exon | 76405916 | 76406002 | 76405916 | ID=MS.gene06699.t1.exon3;Parent=MS.gene06699.t1 |
| chr3.3 | CDS | 76405916 | 76406002 | 76405916 | ID=cds.MS.gene06699.t1;Parent=MS.gene06699.t1 |
| chr3.3 | exon | 76406141 | 76406245 | 76406141 | ID=MS.gene06699.t1.exon4;Parent=MS.gene06699.t1 |
| chr3.3 | CDS | 76406141 | 76406245 | 76406141 | ID=cds.MS.gene06699.t1;Parent=MS.gene06699.t1 |
| chr3.3 | exon | 76406428 | 76406589 | 76406428 | ID=MS.gene06699.t1.exon5;Parent=MS.gene06699.t1 |
| chr3.3 | CDS | 76406428 | 76406589 | 76406428 | ID=cds.MS.gene06699.t1;Parent=MS.gene06699.t1 |
| chr3.3 | exon | 76406881 | 76406916 | 76406881 | ID=MS.gene06699.t1.exon6;Parent=MS.gene06699.t1 |
| chr3.3 | CDS | 76406881 | 76406916 | 76406881 | ID=cds.MS.gene06699.t1;Parent=MS.gene06699.t1 |
| chr3.3 | exon | 76406998 | 76407069 | 76406998 | ID=MS.gene06699.t1.exon7;Parent=MS.gene06699.t1 |
| chr3.3 | CDS | 76406998 | 76407069 | 76406998 | ID=cds.MS.gene06699.t1;Parent=MS.gene06699.t1 |
| chr3.3 | exon | 76407423 | 76407703 | 76407423 | ID=MS.gene06699.t1.exon8;Parent=MS.gene06699.t1 |
| chr3.3 | CDS | 76407423 | 76407703 | 76407423 | ID=cds.MS.gene06699.t1;Parent=MS.gene06699.t1 |
| chr3.3 | exon | 76407923 | 76408172 | 76407923 | ID=MS.gene06699.t1.exon9;Parent=MS.gene06699.t1 |
| chr3.3 | CDS | 76407923 | 76408172 | 76407923 | ID=cds.MS.gene06699.t1;Parent=MS.gene06699.t1 |
| Gene Sequence |
| Protein sequence |
