Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067079.t1 | RHN69325.1 | 95.9 | 616 | 25 | 0 | 1 | 616 | 1 | 616 | 9.00E-274 | 952.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067079.t1 | Q0WPZ7 | 45.8 | 607 | 273 | 10 | 15 | 609 | 21 | 583 | 9.0e-81 | 302.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067079.t1 | G7J344 | 95.9 | 616 | 25 | 0 | 1 | 616 | 4 | 619 | 6.5e-274 | 952.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene07517 | MS.gene067079 | PPI |
MS.gene067079 | MS.gene065809 | PPI |
MS.gene067079 | MS.gene004979 | PPI |
MS.gene067079 | MS.gene86831 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067079.t1 | MTR_3g086460 | 96.104 | 616 | 24 | 0 | 1 | 616 | 4 | 619 | 0.0 | 1219 |
MS.gene067079.t1 | MTR_7g034350 | 52.941 | 187 | 44 | 3 | 431 | 616 | 4 | 147 | 7.66e-55 | 184 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067079.t1 | AT1G13120 | 42.414 | 613 | 290 | 15 | 15 | 611 | 21 | 586 | 8.33e-144 | 431 |
MS.gene067079.t1 | AT4G05523 | 30.952 | 210 | 103 | 8 | 15 | 213 | 21 | 199 | 9.44e-20 | 89.0 |
Find 118 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCGGAATATAAAGCAAATA+AGG | 0.196341 | 3.4:+80579848 | MS.gene067079:CDS |
CAAGAGAAAGGTTGCTTTGC+AGG | 0.219008 | 3.4:+80578290 | MS.gene067079:CDS |
TTCCATTGCTGCCTTTGTTT+TGG | 0.224984 | 3.4:-80578712 | None:intergenic |
CCTTGGTGTCAGTATTTAAT+AGG | 0.247209 | 3.4:-80578821 | None:intergenic |
TGTTGAGATATTAATTAAAA+AGG | 0.253115 | 3.4:+80580602 | MS.gene067079:CDS |
CCCTTATTTGCTTTATATTC+CGG | 0.260197 | 3.4:-80579849 | None:intergenic |
GACTGCAGGTTCCTTCCTTC+TGG | 0.268189 | 3.4:-80582550 | None:intergenic |
CCTTATTTGCTTTATATTCC+GGG | 0.310245 | 3.4:-80579848 | None:intergenic |
TTGTAGGGGAGCTATGAAAT+TGG | 0.312211 | 3.4:+80576583 | None:intergenic |
TACTTCCTCGGCTTTAAGTT+TGG | 0.326776 | 3.4:-80578646 | None:intergenic |
AAAGCACCTGGTTTACAAAA+AGG | 0.349016 | 3.4:+80581565 | MS.gene067079:CDS |
CAAAGAAACAAGGCAGGAAT+TGG | 0.357926 | 3.4:+80577504 | MS.gene067079:CDS |
GGTGTACGGTGCACTGGTTC+AGG | 0.362844 | 3.4:+80582048 | MS.gene067079:CDS |
AGCAAAATATCCATTACATA+TGG | 0.370046 | 3.4:-80581506 | None:intergenic |
CCGGAATATAAAGCAAATAA+GGG | 0.387902 | 3.4:+80579849 | MS.gene067079:CDS |
CTGCAAAGCAACCTTTCTCT+TGG | 0.394273 | 3.4:-80578289 | None:intergenic |
CGTCTCCGAGCTCAATGCTT+TGG | 0.394800 | 3.4:+80576664 | MS.gene067079:CDS |
AAGAAATTGAGAAAGGTAGA+AGG | 0.400427 | 3.4:+80576911 | MS.gene067079:CDS |
TTCCGATGTTGACTCTGCTT+TGG | 0.402079 | 3.4:+80577157 | MS.gene067079:CDS |
GCAGTAGTCTTCGCTGAATC+TGG | 0.404397 | 3.4:-80582484 | None:intergenic |
TTGCTGCTTCTGATCCTGAT+TGG | 0.416301 | 3.4:+80576627 | MS.gene067079:CDS |
TCGCTGTCTGTCTCATACTC+AGG | 0.418770 | 3.4:-80576949 | None:intergenic |
TCCTTCCTTCTGGCACTTGA+AGG | 0.419682 | 3.4:-80582540 | None:intergenic |
CCTCCCCAACTTTATTCATC+AGG | 0.419766 | 3.4:-80577193 | None:intergenic |
CTATTTGTGATCTGAGTTCA+CGG | 0.419778 | 3.4:-80578227 | None:intergenic |
AATAAAGTTGGGGAGGTAGA+AGG | 0.421366 | 3.4:+80577200 | MS.gene067079:CDS |
TGAATTTCTCAACTCGAAGA+AGG | 0.425487 | 3.4:-80577483 | None:intergenic |
CTACTTTGCCCGCAGATGGC+TGG | 0.429531 | 3.4:+80582367 | MS.gene067079:intron |
CTTACCTGATGAATAAAGTT+GGG | 0.433506 | 3.4:+80577189 | MS.gene067079:CDS |
CGCATGGCTTGCAAGAAGGT+TGG | 0.436683 | 3.4:+80582207 | MS.gene067079:CDS |
ATTGCAAAGGGAGCACTAGC+AGG | 0.440136 | 3.4:-80581292 | None:intergenic |
CATTGTTCTCATTACATCTC+AGG | 0.442576 | 3.4:+80581324 | MS.gene067079:CDS |
GCCACGAGAGTGATATTTCC+CGG | 0.447718 | 3.4:+80579830 | MS.gene067079:CDS |
CGCTGTCTGTCTCATACTCA+GGG | 0.448994 | 3.4:-80576948 | None:intergenic |
GGAAATATCACTCTCGTGGC+GGG | 0.451213 | 3.4:-80579827 | None:intergenic |
TGTAGGGGAGCTATGAAATT+GGG | 0.453562 | 3.4:+80576584 | None:intergenic |
AGCTATGAAATTGGGTCGAC+TGG | 0.455057 | 3.4:+80576592 | None:intergenic |
CCAACTTTATTCATCAGGTA+AGG | 0.459982 | 3.4:-80577188 | None:intergenic |
GCATGGCTTGCAAGAAGGTT+GGG | 0.460900 | 3.4:+80582208 | MS.gene067079:CDS |
ACAGCTGTATATTGATTAGC+TGG | 0.468190 | 3.4:-80582260 | None:intergenic |
AAAACCCATACCGGATTCCT+TGG | 0.468656 | 3.4:-80578838 | None:intergenic |
GGGGCATAAGAGACAATGTT+AGG | 0.469707 | 3.4:+80579869 | MS.gene067079:CDS |
AAGGTTGGGCGTGGCTTGCA+AGG | 0.480309 | 3.4:+80582222 | MS.gene067079:CDS |
CCTTACCTGATGAATAAAGT+TGG | 0.481739 | 3.4:+80577188 | MS.gene067079:CDS |
GAGGCATACCTCAGAAGTAT+TGG | 0.492547 | 3.4:+80581956 | MS.gene067079:CDS |
ATCTCAACACTGAATGATTG+AGG | 0.492927 | 3.4:-80580588 | None:intergenic |
TCGAGAAGACAATGGAAAGT+TGG | 0.493098 | 3.4:+80581982 | MS.gene067079:CDS |
TGAATGATTGAGGGCATTGA+CGG | 0.503300 | 3.4:-80580578 | None:intergenic |
GGAAGTAAAACAAGCTGCAT+TGG | 0.503573 | 3.4:+80578662 | MS.gene067079:CDS |
AATACTGACACCAAGGAATC+CGG | 0.505188 | 3.4:+80578828 | MS.gene067079:CDS |
GCAAAATATCCATTACATAT+GGG | 0.508499 | 3.4:-80581505 | None:intergenic |
TTCATCAAACTACTTCATCA+AGG | 0.511278 | 3.4:+80576729 | MS.gene067079:CDS |
TATGAAGGTGTACGGTGCAC+TGG | 0.512093 | 3.4:+80582042 | MS.gene067079:CDS |
AGCCAAAACAAAGGCAGCAA+TGG | 0.513768 | 3.4:+80578710 | MS.gene067079:CDS |
GTCTATCTTTCAATCAAAAG+AGG | 0.513894 | 3.4:+80581937 | MS.gene067079:intron |
GGTGCTTTGGGACGGTGTAA+AGG | 0.520108 | 3.4:-80581550 | None:intergenic |
TAGAAATAAGATCTCAGCGT+TGG | 0.520586 | 3.4:+80577420 | MS.gene067079:CDS |
TCAGATCACAAATAGAAGAA+AGG | 0.525142 | 3.4:+80578235 | MS.gene067079:CDS |
AGAGCATCGAAACTCCAATC+AGG | 0.527876 | 3.4:-80576641 | None:intergenic |
AGTGGGAAAGAAATTGAGAA+AGG | 0.533181 | 3.4:+80576904 | MS.gene067079:CDS |
AATCCGCATGGCTTGCAAGA+AGG | 0.533446 | 3.4:+80582203 | MS.gene067079:CDS |
CTTCAAATATAGAGCATGGT+AGG | 0.534137 | 3.4:+80579474 | MS.gene067079:CDS |
TTACACCGTCCCAAAGCACC+TGG | 0.537516 | 3.4:+80581553 | MS.gene067079:CDS |
GAATTTCTCAACTCGAAGAA+GGG | 0.543891 | 3.4:-80577482 | None:intergenic |
AAAGGCTAAAGCTGAAGCAG+AGG | 0.545258 | 3.4:+80578332 | MS.gene067079:CDS |
ATGACATTGGCAATTGCAAA+GGG | 0.545913 | 3.4:-80581304 | None:intergenic |
TTAGGGTTAACTTATTCAGT+GGG | 0.546979 | 3.4:+80576887 | MS.gene067079:intron |
AGCACTAGCAGGGCTTGCAC+AGG | 0.547376 | 3.4:-80581281 | None:intergenic |
TCTCAACACTGAATGATTGA+GGG | 0.548370 | 3.4:-80580587 | None:intergenic |
GTATGAAGAGGCCAAGAGAA+AGG | 0.551262 | 3.4:+80578278 | MS.gene067079:CDS |
GTGATAACGTATTTGACTGC+AGG | 0.554583 | 3.4:-80582564 | None:intergenic |
TTTAGGGTTAACTTATTCAG+TGG | 0.560055 | 3.4:+80576886 | MS.gene067079:intron |
GTTTGATGAAAATGCAAAGG+TGG | 0.561720 | 3.4:-80576716 | None:intergenic |
AGGTGGAGTGGAAGAATTAG+CGG | 0.565983 | 3.4:-80576699 | None:intergenic |
GCGGCTAGAATCATATATGA+AGG | 0.567325 | 3.4:+80582027 | MS.gene067079:CDS |
GCTTGCAAGAAGGTTGGGCG+TGG | 0.571452 | 3.4:+80582213 | MS.gene067079:CDS |
GAAATTCAAAGAAACAAGGC+AGG | 0.576260 | 3.4:+80577498 | MS.gene067079:CDS |
GTAAACCAGGTGCTTTGGGA+CGG | 0.576994 | 3.4:-80581558 | None:intergenic |
TCCTTCAAGTGCCAGAAGGA+AGG | 0.577361 | 3.4:+80582539 | MS.gene067079:CDS |
TGACAAAGCGTTAGTAGTAT+CGG | 0.578183 | 3.4:+80576981 | MS.gene067079:CDS |
ATGAAAATGCAAAGGTGGAG+TGG | 0.582161 | 3.4:-80576711 | None:intergenic |
ACGACAGGTCCCATATGTAA+TGG | 0.582923 | 3.4:+80581496 | MS.gene067079:intron |
GAATCATATATGAAGGTGTA+CGG | 0.586014 | 3.4:+80582034 | MS.gene067079:CDS |
AATGACATTGGCAATTGCAA+AGG | 0.588611 | 3.4:-80581305 | None:intergenic |
AAGTGATGCAGCGTATGAAG+AGG | 0.595948 | 3.4:+80578266 | MS.gene067079:CDS |
ATTCTCCAAAGCATTGAGCT+CGG | 0.597981 | 3.4:-80576669 | None:intergenic |
TAGAACTTGATCTTACAACT+TGG | 0.600852 | 3.4:-80579529 | None:intergenic |
CTCGATAACCAATACTTCTG+AGG | 0.601452 | 3.4:-80581964 | None:intergenic |
TGTAATGAGAACAATGACAT+TGG | 0.604848 | 3.4:-80581317 | None:intergenic |
TTGCAAAGGGAGCACTAGCA+GGG | 0.607083 | 3.4:-80581291 | None:intergenic |
AGTATTTAATAGGCTTGATG+CGG | 0.608274 | 3.4:-80578811 | None:intergenic |
CCTGATGAATAAAGTTGGGG+AGG | 0.613663 | 3.4:+80577193 | MS.gene067079:CDS |
GTACAGAAGATTATTTAAAG+CGG | 0.615401 | 3.4:+80582008 | MS.gene067079:CDS |
CAGTTCCTTCAAGTGCCAGA+AGG | 0.616857 | 3.4:+80582535 | MS.gene067079:CDS |
CCGAACATTCAAAATCCGCA+TGG | 0.620982 | 3.4:+80582191 | MS.gene067079:CDS |
GAGAAAGGTTGCTTTGCAGG+AGG | 0.625015 | 3.4:+80578293 | MS.gene067079:CDS |
GAAGACTACTGCATACATGC+AGG | 0.626530 | 3.4:+80582495 | MS.gene067079:CDS |
ATTGGTTATCGAGAAGACAA+TGG | 0.628835 | 3.4:+80581974 | MS.gene067079:CDS |
AGTGCTTCAAATATAGAGCA+TGG | 0.630506 | 3.4:+80579470 | MS.gene067079:CDS |
TTACCTGATGAATAAAGTTG+GGG | 0.630676 | 3.4:+80577190 | MS.gene067079:CDS |
CTGTCTCATACTCAGGGGCA+CGG | 0.632727 | 3.4:-80576942 | None:intergenic |
CGGAATATAAAGCAAATAAG+GGG | 0.635811 | 3.4:+80579850 | MS.gene067079:CDS |
GCAGGCCAAACTTAAAGCCG+AGG | 0.640019 | 3.4:+80578641 | MS.gene067079:intron |
GGGAAATATCACTCTCGTGG+CGG | 0.640943 | 3.4:-80579828 | None:intergenic |
CCTATTAAATACTGACACCA+AGG | 0.642682 | 3.4:+80578821 | MS.gene067079:CDS |
TCCGGGAAATATCACTCTCG+TGG | 0.645571 | 3.4:-80579831 | None:intergenic |
CAACCTTCTTGCAAGCCATG+CGG | 0.652087 | 3.4:-80582206 | None:intergenic |
AACACACGATCATCAACTGA+GGG | 0.653093 | 3.4:+80577238 | MS.gene067079:CDS |
CTTGTGATGAAATTTATCTG+AGG | 0.654595 | 3.4:+80577022 | MS.gene067079:CDS |
GCGTTAGTAGTATCGGACAC+TGG | 0.656621 | 3.4:+80576988 | MS.gene067079:CDS |
GTAGTTTGATGAAAATGCAA+AGG | 0.657587 | 3.4:-80576719 | None:intergenic |
TGTAAGATCAAGTTCTACAC+AGG | 0.659828 | 3.4:+80579535 | MS.gene067079:CDS |
TTGAGAAATTCAAAGAAACA+AGG | 0.661129 | 3.4:+80577494 | MS.gene067079:CDS |
AGTAATGGAAGCCAAAACAA+AGG | 0.684556 | 3.4:+80578701 | MS.gene067079:CDS |
TTCCAAAGCAGAGTCAACAT+CGG | 0.691363 | 3.4:-80577159 | None:intergenic |
TAACACACGATCATCAACTG+AGG | 0.709226 | 3.4:+80577237 | MS.gene067079:CDS |
TGAGTATGAGACAGACAGCG+AGG | 0.732630 | 3.4:+80576951 | MS.gene067079:CDS |
GCTGTCTGTCTCATACTCAG+GGG | 0.738330 | 3.4:-80576947 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAATAATGAATTGATA+AGG | - | chr3.4:80576771-80576790 | None:intergenic | 10.0% |
!! | GAAAAATTAGTATATTTATA+GGG | + | chr3.4:80580408-80580427 | MS.gene067079:intron | 10.0% |
!! | TGAAAAATTAGTATATTTAT+AGG | + | chr3.4:80580407-80580426 | MS.gene067079:intron | 10.0% |
!!! | AAAAAATTCTAATTTTTTTG+GGG | - | chr3.4:80580177-80580196 | None:intergenic | 10.0% |
!!! | AATATGAATTTTTATATGTT+TGG | + | chr3.4:80580213-80580232 | MS.gene067079:intron | 10.0% |
!!! | TAATATTTTGTAATTTTCTT+TGG | + | chr3.4:80577114-80577133 | MS.gene067079:intron | 10.0% |
!!! | TTTTTTTTTATTAGAAGAAT+GGG | - | chr3.4:80580847-80580866 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTATTAGAAGAA+TGG | - | chr3.4:80580848-80580867 | None:intergenic | 10.0% |
!! | AAATAAATATTGATGAAACA+AGG | - | chr3.4:80579065-80579084 | None:intergenic | 15.0% |
!! | AACAATCAAACTAAAATAAA+AGG | - | chr3.4:80578366-80578385 | None:intergenic | 15.0% |
!! | ACAATCAAACTAAAATAAAA+GGG | - | chr3.4:80578365-80578384 | None:intergenic | 15.0% |
!! | TACATATGATATTACTTAAA+AGG | - | chr3.4:80580096-80580115 | None:intergenic | 15.0% |
!! | TGTTGAGATATTAATTAAAA+AGG | + | chr3.4:80580602-80580621 | MS.gene067079:CDS | 15.0% |
!! | TTGGTGTATTTATTAATATA+CGG | + | chr3.4:80582323-80582342 | MS.gene067079:intron | 15.0% |
!!! | AAAAAAAAAAGTGTATGAAA+CGG | - | chr3.4:80579181-80579200 | None:intergenic | 15.0% |
!!! | AATTTTTTTTCCAATTTTTC+TGG | + | chr3.4:80580282-80580301 | MS.gene067079:intron | 15.0% |
!!! | ATTTTAGTTTGATTGTTATT+TGG | + | chr3.4:80578369-80578388 | MS.gene067079:intron | 15.0% |
!!! | TTAATTGTAGATGTTATTTT+TGG | + | chr3.4:80580739-80580758 | MS.gene067079:intron | 15.0% |
!!! | TTCACGATATTTAAATTTTA+CGG | + | chr3.4:80578617-80578636 | MS.gene067079:intron | 15.0% |
!!! | TTTTGTTAGTATCTTATTTA+AGG | - | chr3.4:80580484-80580503 | None:intergenic | 15.0% |
!! | AAAAGTCGAAGAAAAAATTT+AGG | - | chr3.4:80580035-80580054 | None:intergenic | 20.0% |
!! | AAAGTCGAAGAAAAAATTTA+GGG | - | chr3.4:80580034-80580053 | None:intergenic | 20.0% |
!! | AAATTCACTTGTATGAATAT+TGG | + | chr3.4:80577972-80577991 | MS.gene067079:intron | 20.0% |
!! | AATATTCTACACATTTCATA+AGG | + | chr3.4:80580318-80580337 | MS.gene067079:intron | 20.0% |
!! | AATTCACTTGTATGAATATT+GGG | + | chr3.4:80577973-80577992 | MS.gene067079:intron | 20.0% |
!! | ACAATAACTAATCTTAAAAC+TGG | + | chr3.4:80580707-80580726 | MS.gene067079:intron | 20.0% |
!! | AGAAAGATATTATATGTCAA+TGG | - | chr3.4:80580650-80580669 | None:intergenic | 20.0% |
!! | ATAAATAAGTTGTAGAATGA+AGG | - | chr3.4:80577611-80577630 | None:intergenic | 20.0% |
!! | ATATATATACAGAGAAACAA+AGG | - | chr3.4:80579012-80579031 | None:intergenic | 20.0% |
!! | ATATGATATTACTTAAAAGG+AGG | - | chr3.4:80580093-80580112 | None:intergenic | 20.0% |
!! | ATATTATATGTCAATGGAAT+CGG | - | chr3.4:80580644-80580663 | None:intergenic | 20.0% |
!! | ATTTAAATATCGTGAATGAA+TGG | - | chr3.4:80578613-80578632 | None:intergenic | 20.0% |
!! | CAAAAGCAAATAAATAATCT+TGG | - | chr3.4:80581454-80581473 | None:intergenic | 20.0% |
!! | CAATAACTAATCTTAAAACT+GGG | + | chr3.4:80580708-80580727 | MS.gene067079:intron | 20.0% |
!! | CTGTATATATATTAGTATAC+TGG | + | chr3.4:80579020-80579039 | MS.gene067079:intron | 20.0% |
!! | GTTTAAATTTATGGAATGTT+TGG | + | chr3.4:80580985-80581004 | MS.gene067079:intron | 20.0% |
!! | TAATGCATATTTATTTCACA+AGG | + | chr3.4:80579699-80579718 | MS.gene067079:intron | 20.0% |
!! | TATGATATTACTTAAAAGGA+GGG | - | chr3.4:80580092-80580111 | None:intergenic | 20.0% |
!! | TCTTGAAAAGAAAAGATAAA+GGG | - | chr3.4:80577578-80577597 | None:intergenic | 20.0% |
!! | TTCCATAAATTTAAACCATT+AGG | - | chr3.4:80580981-80581000 | None:intergenic | 20.0% |
!! | TTTATTAGAGGTTCAAATAA+TGG | + | chr3.4:80577704-80577723 | MS.gene067079:intron | 20.0% |
!!! | AAAAGTATTTTAGCAAGAAT+AGG | + | chr3.4:80580864-80580883 | MS.gene067079:intron | 20.0% |
!!! | AAAGTTGAAGAAAATTTTAG+AGG | + | chr3.4:80580376-80580395 | MS.gene067079:intron | 20.0% |
!!! | AAGTTGAAGAAAATTTTAGA+GGG | + | chr3.4:80580377-80580396 | MS.gene067079:intron | 20.0% |
!!! | ATGAATTTTTATATGTTTGG+TGG | + | chr3.4:80580216-80580235 | MS.gene067079:intron | 20.0% |
!!! | CAAGATTATTTATTTGCTTT+TGG | + | chr3.4:80581452-80581471 | MS.gene067079:intron | 20.0% |
!!! | CTACAATAATTTTGTTTGTA+TGG | + | chr3.4:80581709-80581728 | MS.gene067079:intron | 20.0% |
!!! | GAAAAGTTGGTATATTTATA+GGG | - | chr3.4:80580003-80580022 | None:intergenic | 20.0% |
!!! | TAATATCTTTCTGCTTTATT+TGG | + | chr3.4:80580658-80580677 | MS.gene067079:intron | 20.0% |
!!! | TATCATCGAAAAAAAGTTTT+AGG | - | chr3.4:80578496-80578515 | None:intergenic | 20.0% |
!!! | TGAACTTTGTTGATTTTTTA+GGG | + | chr3.4:80576870-80576889 | MS.gene067079:intron | 20.0% |
!!! | TGGTGATTGAAAATTTTATA+GGG | + | chr3.4:80580349-80580368 | MS.gene067079:intron | 20.0% |
!!! | TTGAACTTTGTTGATTTTTT+AGG | + | chr3.4:80576869-80576888 | MS.gene067079:intron | 20.0% |
!!! | TTGATAAAGGGAATTTTTTA+GGG | + | chr3.4:80579960-80579979 | MS.gene067079:intron | 20.0% |
!!! | TTTAGGGTTAAATATGTTTT+TGG | + | chr3.4:80579976-80579995 | MS.gene067079:intron | 20.0% |
!!! | TTTCCTTTTGAGATATATAT+GGG | + | chr3.4:80579209-80579228 | MS.gene067079:intron | 20.0% |
!!! | TTTGATAAAGGGAATTTTTT+AGG | + | chr3.4:80579959-80579978 | MS.gene067079:intron | 20.0% |
!!! | TTTTCCTTTTGAGATATATA+TGG | + | chr3.4:80579208-80579227 | MS.gene067079:intron | 20.0% |
! | AAAATCTCTTCCAGAAAAAT+TGG | - | chr3.4:80580295-80580314 | None:intergenic | 25.0% |
! | AAGTGAAGATGAAAAACTTT+CGG | - | chr3.4:80580064-80580083 | None:intergenic | 25.0% |
! | AATGGTGAAAAATTGCTTAA+TGG | - | chr3.4:80577789-80577808 | None:intergenic | 25.0% |
! | AATTGGGTTACATATGTATT+TGG | - | chr3.4:80580435-80580454 | None:intergenic | 25.0% |
! | AGCAAAATATCCATTACATA+TGG | - | chr3.4:80581509-80581528 | None:intergenic | 25.0% |
! | AGTAAGAAATGCAAAATGTT+TGG | + | chr3.4:80582304-80582323 | MS.gene067079:intron | 25.0% |
! | CAAGTCAAATTGGTATAAAT+AGG | - | chr3.4:80577278-80577297 | None:intergenic | 25.0% |
! | CAATTCTCTTCACTAAATAT+TGG | + | chr3.4:80577842-80577861 | MS.gene067079:intron | 25.0% |
! | CACCTAATGGTTTAAATTTA+TGG | + | chr3.4:80580976-80580995 | MS.gene067079:intron | 25.0% |
! | CTTGAAAAGAAAAGATAAAG+GGG | - | chr3.4:80577577-80577596 | None:intergenic | 25.0% |
! | GCAAAATATCCATTACATAT+GGG | - | chr3.4:80581508-80581527 | None:intergenic | 25.0% |
! | GTACAGAAGATTATTTAAAG+CGG | + | chr3.4:80582008-80582027 | MS.gene067079:CDS | 25.0% |
! | GTCTTGAAAAGAAAAGATAA+AGG | - | chr3.4:80577579-80577598 | None:intergenic | 25.0% |
! | TAAGCTTCTATAAAGAAGAT+TGG | - | chr3.4:80578579-80578598 | None:intergenic | 25.0% |
! | TAAGGATTGAAATTTCCTAT+AGG | - | chr3.4:80580466-80580485 | None:intergenic | 25.0% |
! | TATACATGTACAGAAATGTT+TGG | + | chr3.4:80578400-80578419 | MS.gene067079:intron | 25.0% |
! | TCAAAATCAGAGAATTTGAT+GGG | - | chr3.4:80579765-80579784 | None:intergenic | 25.0% |
! | TCATATTCATAAACTTAACG+CGG | - | chr3.4:80576826-80576845 | None:intergenic | 25.0% |
! | TGATCTAAAAGTGAAAACAT+TGG | - | chr3.4:80578891-80578910 | None:intergenic | 25.0% |
! | TTCCCTTTATCAAAATGTAT+AGG | - | chr3.4:80579953-80579972 | None:intergenic | 25.0% |
! | TTGAGAAATTCAAAGAAACA+AGG | + | chr3.4:80577494-80577513 | MS.gene067079:CDS | 25.0% |
!! | AAATATGATTTGATAACCGT+GGG | + | chr3.4:80581870-80581889 | MS.gene067079:intron | 25.0% |
!! | AAATTTTCAATCACCACTTT+TGG | - | chr3.4:80580345-80580364 | None:intergenic | 25.0% |
!! | ATATTTAAATTTTACGGTGC+AGG | + | chr3.4:80578623-80578642 | MS.gene067079:intron | 25.0% |
!! | ATTGATAAGGTTTTTGAATG+TGG | - | chr3.4:80576758-80576777 | None:intergenic | 25.0% |
!! | GTGGTGATTGAAAATTTTAT+AGG | + | chr3.4:80580348-80580367 | MS.gene067079:intron | 25.0% |
!! | TTGATAAGGTTTTTGAATGT+GGG | - | chr3.4:80576757-80576776 | None:intergenic | 25.0% |
!!! | AAGATTTTGACAAATTCACA+CGG | + | chr3.4:80582085-80582104 | MS.gene067079:intron | 25.0% |
!!! | AATTACGAGTTTTAAGACAA+AGG | - | chr3.4:80579586-80579605 | None:intergenic | 25.0% |
!!! | AATTCTCTGATTTTGACATT+TGG | + | chr3.4:80579769-80579788 | MS.gene067079:intron | 25.0% |
!!! | ATATGTAATGGATATTTTGC+TGG | + | chr3.4:80581508-80581527 | MS.gene067079:CDS | 25.0% |
!!! | CGAAAAGTTGGTATATTTAT+AGG | - | chr3.4:80580004-80580023 | None:intergenic | 25.0% |
!!! | GACCTATACATTTTGATAAA+GGG | + | chr3.4:80579948-80579967 | MS.gene067079:intron | 25.0% |
!!! | TGACCTATACATTTTGATAA+AGG | + | chr3.4:80579947-80579966 | MS.gene067079:intron | 25.0% |
!!! | TGCAATGTTTTAAAAACTTG+TGG | + | chr3.4:80581086-80581105 | MS.gene067079:intron | 25.0% |
AAAATCAGAGAATTTGATGG+GGG | - | chr3.4:80579763-80579782 | None:intergenic | 30.0% | |
AACCTCTAATAAAGCACATT+GGG | - | chr3.4:80577697-80577716 | None:intergenic | 30.0% | |
AAGAAATTGAGAAAGGTAGA+AGG | + | chr3.4:80576911-80576930 | MS.gene067079:CDS | 30.0% | |
AAGCAAAACCAACAGATAAT+TGG | - | chr3.4:80579635-80579654 | None:intergenic | 30.0% | |
AAGCAATACCAATTATCTGT+TGG | + | chr3.4:80579624-80579643 | MS.gene067079:intron | 30.0% | |
ACAAAGGATTTCCAACTAAA+TGG | - | chr3.4:80578996-80579015 | None:intergenic | 30.0% | |
AGTATTTAATAGGCTTGATG+CGG | - | chr3.4:80578814-80578833 | None:intergenic | 30.0% | |
AGTGAAGATGAAAAACTTTC+GGG | - | chr3.4:80580063-80580082 | None:intergenic | 30.0% | |
ATAACTTCAGTTCCTTAGAA+TGG | + | chr3.4:80580803-80580822 | MS.gene067079:intron | 30.0% | |
ATATTGATGAAACAAGGAAG+AGG | - | chr3.4:80579059-80579078 | None:intergenic | 30.0% | |
ATCAGTTAACTGTATATGGA+AGG | + | chr3.4:80580762-80580781 | MS.gene067079:intron | 30.0% | |
ATCTGTTTATACTTCATAGG+AGG | + | chr3.4:80577883-80577902 | MS.gene067079:intron | 30.0% | |
ATTAGGTGAAGATACATGAA+TGG | - | chr3.4:80580964-80580983 | None:intergenic | 30.0% | |
ATTCATGTATCTTCACCTAA+TGG | + | chr3.4:80580963-80580982 | MS.gene067079:intron | 30.0% | |
CAAAATCAGAGAATTTGATG+GGG | - | chr3.4:80579764-80579783 | None:intergenic | 30.0% | |
CATTAACAAGATCCATATAG+TGG | - | chr3.4:80578531-80578550 | None:intergenic | 30.0% | |
CCGGAATATAAAGCAAATAA+GGG | + | chr3.4:80579849-80579868 | MS.gene067079:CDS | 30.0% | |
CCTATAGGACATCAAAAATT+GGG | - | chr3.4:80580451-80580470 | None:intergenic | 30.0% | |
CGGAATATAAAGCAAATAAG+GGG | + | chr3.4:80579850-80579869 | MS.gene067079:CDS | 30.0% | |
CTATGGTTGTTAATAAATGC+AGG | + | chr3.4:80581214-80581233 | MS.gene067079:intron | 30.0% | |
CTGATCTGTTTATACTTCAT+AGG | + | chr3.4:80577880-80577899 | MS.gene067079:intron | 30.0% | |
CTTACCTGATGAATAAAGTT+GGG | + | chr3.4:80577189-80577208 | MS.gene067079:CDS | 30.0% | |
CTTGTGATGAAATTTATCTG+AGG | + | chr3.4:80577022-80577041 | MS.gene067079:CDS | 30.0% | |
GAAATACGAGAATAAAGCTA+TGG | - | chr3.4:80577063-80577082 | None:intergenic | 30.0% | |
GATCCCATATATATCTCAAA+AGG | - | chr3.4:80579215-80579234 | None:intergenic | 30.0% | |
GGAAAAAAACAGAGCATAAA+AGG | + | chr3.4:80580683-80580702 | MS.gene067079:intron | 30.0% | |
GTAGTTTGATGAAAATGCAA+AGG | - | chr3.4:80576722-80576741 | None:intergenic | 30.0% | |
GTCAAAATCAGAGAATTTGA+TGG | - | chr3.4:80579766-80579785 | None:intergenic | 30.0% | |
GTCAAATATTAGTTATCAGC+AGG | - | chr3.4:80578033-80578052 | None:intergenic | 30.0% | |
GTCTATCTTTCAATCAAAAG+AGG | + | chr3.4:80581937-80581956 | MS.gene067079:intron | 30.0% | |
TAAAGGGAAAAAACTGACAT+TGG | - | chr3.4:80578921-80578940 | None:intergenic | 30.0% | |
TAAATGGTAGTAAGAGAATC+AGG | - | chr3.4:80578980-80578999 | None:intergenic | 30.0% | |
TACCGTTGAAAACAGATATT+GGG | + | chr3.4:80579558-80579577 | MS.gene067079:intron | 30.0% | |
TAGAACTTGATCTTACAACT+TGG | - | chr3.4:80579532-80579551 | None:intergenic | 30.0% | |
TCAGATCACAAATAGAAGAA+AGG | + | chr3.4:80578235-80578254 | MS.gene067079:CDS | 30.0% | |
TCCTATAGGACATCAAAAAT+TGG | - | chr3.4:80580452-80580471 | None:intergenic | 30.0% | |
TCTAAGGAACTGAAGTTATT+AGG | - | chr3.4:80580802-80580821 | None:intergenic | 30.0% | |
TGAAAAAAGAAAACCCATAC+CGG | - | chr3.4:80578850-80578869 | None:intergenic | 30.0% | |
TGTAATGAGAACAATGACAT+TGG | - | chr3.4:80581320-80581339 | None:intergenic | 30.0% | |
TTACCTGATGAATAAAGTTG+GGG | + | chr3.4:80577190-80577209 | MS.gene067079:CDS | 30.0% | |
TTAGGGTTAACTTATTCAGT+GGG | + | chr3.4:80576887-80576906 | MS.gene067079:intron | 30.0% | |
TTCATCAAACTACTTCATCA+AGG | + | chr3.4:80576729-80576748 | MS.gene067079:CDS | 30.0% | |
TTCTCTTACTACCATTTAGT+TGG | + | chr3.4:80578982-80579001 | MS.gene067079:intron | 30.0% | |
TTGAAAAGCTTAGTCATTCT+TGG | + | chr3.4:80577309-80577328 | MS.gene067079:intron | 30.0% | |
TTGGATCAGTTAACTGTATA+TGG | + | chr3.4:80580758-80580777 | MS.gene067079:intron | 30.0% | |
! | AAACAAGAGAAACAGTGTTT+TGG | - | chr3.4:80578096-80578115 | None:intergenic | 30.0% |
! | AAATGTATGGGTTGCAATTT+AGG | - | chr3.4:80578431-80578450 | None:intergenic | 30.0% |
! | AACAAGAGAAACAGTGTTTT+GGG | - | chr3.4:80578095-80578114 | None:intergenic | 30.0% |
! | AACATCTGAAACCAATTTCA+TGG | - | chr3.4:80581157-80581176 | None:intergenic | 30.0% |
! | AAGTTACCTTTTTGTAAACC+AGG | - | chr3.4:80581574-80581593 | None:intergenic | 30.0% |
! | AAGTTGAATCAAAAGTGTAG+GGG | + | chr3.4:80579269-80579288 | MS.gene067079:intron | 30.0% |
! | AATATGATTTGATAACCGTG+GGG | + | chr3.4:80581871-80581890 | MS.gene067079:intron | 30.0% |
! | CAAATATGATTTGATAACCG+TGG | + | chr3.4:80581869-80581888 | MS.gene067079:intron | 30.0% |
! | CCCTTATTTGCTTTATATTC+CGG | - | chr3.4:80579852-80579871 | None:intergenic | 30.0% |
! | CCTTATTTGCTTTATATTCC+GGG | - | chr3.4:80579851-80579870 | None:intergenic | 30.0% |
! | GAAGTTGAATCAAAAGTGTA+GGG | + | chr3.4:80579268-80579287 | MS.gene067079:intron | 30.0% |
! | GAATCATATATGAAGGTGTA+CGG | + | chr3.4:80582034-80582053 | MS.gene067079:CDS | 30.0% |
! | GCACATTTTGCCTAAATAAA+AGG | + | chr3.4:80581731-80581750 | MS.gene067079:intron | 30.0% |
! | GCATGACTATTTACTCTTTT+GGG | + | chr3.4:80580509-80580528 | MS.gene067079:intron | 30.0% |
! | GGGAATGTAGACAATTTTAT+AGG | - | chr3.4:80577677-80577696 | None:intergenic | 30.0% |
! | TACCCAATATCTGTTTTCAA+CGG | - | chr3.4:80579563-80579582 | None:intergenic | 30.0% |
! | TATTTCACAAGGAATTTGCT+TGG | + | chr3.4:80579710-80579729 | MS.gene067079:intron | 30.0% |
! | TCTTTTGACCCAGATAAAAT+GGG | - | chr3.4:80581763-80581782 | None:intergenic | 30.0% |
! | TGAAGTTGAATCAAAAGTGT+AGG | + | chr3.4:80579267-80579286 | MS.gene067079:intron | 30.0% |
! | TGCATGACTATTTACTCTTT+TGG | + | chr3.4:80580508-80580527 | MS.gene067079:intron | 30.0% |
! | TTCTTTTGACCCAGATAAAA+TGG | - | chr3.4:80581764-80581783 | None:intergenic | 30.0% |
! | TTTAGGGTTAACTTATTCAG+TGG | + | chr3.4:80576886-80576905 | MS.gene067079:intron | 30.0% |
!! | AAGCATTGACTATGAATTAC+AGG | + | chr3.4:80577649-80577668 | MS.gene067079:intron | 30.0% |
!! | ATCTTTCTGCTTTATTTGGA+AGG | + | chr3.4:80580662-80580681 | MS.gene067079:intron | 30.0% |
!!! | AGTATTTTAGCAAGAATAGG+TGG | + | chr3.4:80580867-80580886 | MS.gene067079:intron | 30.0% |
!!! | GTATTTTAGCAAGAATAGGT+GGG | + | chr3.4:80580868-80580887 | MS.gene067079:intron | 30.0% |
AAAAAAACTGCTCCTTAGCT+AGG | - | chr3.4:80581645-80581664 | None:intergenic | 35.0% | |
AAAAGAAAAGATAAAGGGGC+AGG | - | chr3.4:80577573-80577592 | None:intergenic | 35.0% | |
AAAGCTATGGTTCACGAAAT+AGG | - | chr3.4:80577050-80577069 | None:intergenic | 35.0% | |
AAAGCTTAGTCATTCTTGGT+TGG | + | chr3.4:80577313-80577332 | MS.gene067079:intron | 35.0% | |
AACTGCTCTACACAATCTTT+AGG | + | chr3.4:80579425-80579444 | MS.gene067079:intron | 35.0% | |
AATGACATTGGCAATTGCAA+AGG | - | chr3.4:80581308-80581327 | None:intergenic | 35.0% | |
AGCTGAGAAAAAAGCAGTAA+TGG | + | chr3.4:80578686-80578705 | MS.gene067079:CDS | 35.0% | |
AGGATCCAAAAACCATTCTA+AGG | - | chr3.4:80580818-80580837 | None:intergenic | 35.0% | |
AGTGCTTCAAATATAGAGCA+TGG | + | chr3.4:80579470-80579489 | MS.gene067079:CDS | 35.0% | |
AGTGGGAAAGAAATTGAGAA+AGG | + | chr3.4:80576904-80576923 | MS.gene067079:CDS | 35.0% | |
ATACTTCATAGGAGGAAGAT+TGG | + | chr3.4:80577891-80577910 | MS.gene067079:intron | 35.0% | |
ATCGTGAATGAATGGTCATT+TGG | - | chr3.4:80578605-80578624 | None:intergenic | 35.0% | |
ATCTCAACACTGAATGATTG+AGG | - | chr3.4:80580591-80580610 | None:intergenic | 35.0% | |
ATGACATTGGCAATTGCAAA+GGG | - | chr3.4:80581307-80581326 | None:intergenic | 35.0% | |
ATTAGAAGAATGGGTCGTTA+AGG | - | chr3.4:80580838-80580857 | None:intergenic | 35.0% | |
ATTGGTTATCGAGAAGACAA+TGG | + | chr3.4:80581974-80581993 | MS.gene067079:CDS | 35.0% | |
CAAGTGACAACATACTTTAC+AGG | + | chr3.4:80581249-80581268 | MS.gene067079:intron | 35.0% | |
CAATGCAGCAGTAAATGTAT+GGG | - | chr3.4:80578443-80578462 | None:intergenic | 35.0% | |
CATTGTTCTCATTACATCTC+AGG | + | chr3.4:80581324-80581343 | MS.gene067079:CDS | 35.0% | |
CATTTCATAAGGACCAAAAG+TGG | + | chr3.4:80580329-80580348 | MS.gene067079:intron | 35.0% | |
CCAACTTTATTCATCAGGTA+AGG | - | chr3.4:80577191-80577210 | None:intergenic | 35.0% | |
CCCGGAATATAAAGCAAATA+AGG | + | chr3.4:80579848-80579867 | MS.gene067079:CDS | 35.0% | |
CCTATTAAATACTGACACCA+AGG | + | chr3.4:80578821-80578840 | MS.gene067079:CDS | 35.0% | |
CCTTACCTGATGAATAAAGT+TGG | + | chr3.4:80577188-80577207 | MS.gene067079:CDS | 35.0% | |
CTATTTGTGATCTGAGTTCA+CGG | - | chr3.4:80578230-80578249 | None:intergenic | 35.0% | |
CTTCAAATATAGAGCATGGT+AGG | + | chr3.4:80579474-80579493 | MS.gene067079:CDS | 35.0% | |
CTTCACTAAATATTGGCGAA+AGG | + | chr3.4:80577849-80577868 | MS.gene067079:intron | 35.0% | |
CTTCTGCACTACAAAAAGTT+GGG | - | chr3.4:80578173-80578192 | None:intergenic | 35.0% | |
GAAATTCAAAGAAACAAGGC+AGG | + | chr3.4:80577498-80577517 | MS.gene067079:CDS | 35.0% | |
GAACAAAAGCTAGCAAGAAA+TGG | + | chr3.4:80581185-80581204 | MS.gene067079:intron | 35.0% | |
GAACCTCTAATAAAGCACAT+TGG | - | chr3.4:80577698-80577717 | None:intergenic | 35.0% | |
GAATTTCTCAACTCGAAGAA+GGG | - | chr3.4:80577485-80577504 | None:intergenic | 35.0% | |
GACTTTACTAGAACTTGTGA+GGG | + | chr3.4:80581374-80581393 | MS.gene067079:intron | 35.0% | |
GCAAGAAATGGTAGAATCTA+TGG | + | chr3.4:80581197-80581216 | MS.gene067079:intron | 35.0% | |
GGAAAAACAACAGCAAGAAA+AGG | + | chr3.4:80578314-80578333 | MS.gene067079:CDS | 35.0% | |
GTACCGTTGAAAACAGATAT+TGG | + | chr3.4:80579557-80579576 | MS.gene067079:intron | 35.0% | |
GTGAAGATGAAAAACTTTCG+GGG | - | chr3.4:80580062-80580081 | None:intergenic | 35.0% | |
GTGACTGAAATCCATGAAAT+TGG | + | chr3.4:80581143-80581162 | MS.gene067079:intron | 35.0% | |
GTGGAGACTGAAGAAAATAT+AGG | - | chr3.4:80579139-80579158 | None:intergenic | 35.0% | |
GTTTGATGAAAATGCAAAGG+TGG | - | chr3.4:80576719-80576738 | None:intergenic | 35.0% | |
GTTTGGTCTATTCACTTTAC+CGG | + | chr3.4:80578463-80578482 | MS.gene067079:intron | 35.0% | |
TAACAAGATCCATATAGTGG+TGG | - | chr3.4:80578528-80578547 | None:intergenic | 35.0% | |
TAGAAATAAGATCTCAGCGT+TGG | + | chr3.4:80577420-80577439 | MS.gene067079:CDS | 35.0% | |
TAGGGACTAAAACGAAAAGT+TGG | - | chr3.4:80580016-80580035 | None:intergenic | 35.0% | |
TATTTGCAGAACATGTAAGC+AGG | - | chr3.4:80581855-80581874 | None:intergenic | 35.0% | |
TCGTGAATGAATGGTCATTT+GGG | - | chr3.4:80578604-80578623 | None:intergenic | 35.0% | |
TCTCAACACTGAATGATTGA+GGG | - | chr3.4:80580590-80580609 | None:intergenic | 35.0% | |
TGAAGATGAAAAACTTTCGG+GGG | - | chr3.4:80580061-80580080 | None:intergenic | 35.0% | |
TGAATTTCTCAACTCGAAGA+AGG | - | chr3.4:80577486-80577505 | None:intergenic | 35.0% | |
TGTAAGATCAAGTTCTACAC+AGG | + | chr3.4:80579535-80579554 | MS.gene067079:CDS | 35.0% | |
TTATGCGTCAACATATGTTC+AGG | + | chr3.4:80579798-80579817 | MS.gene067079:intron | 35.0% | |
TTGTCACTGACAAGTCAAAT+TGG | - | chr3.4:80577288-80577307 | None:intergenic | 35.0% | |
TTTACATGTCCACCACTATA+TGG | + | chr3.4:80578516-80578535 | MS.gene067079:intron | 35.0% | |
TTTCACCATTTGTTTGAGTG+AGG | + | chr3.4:80577799-80577818 | MS.gene067079:intron | 35.0% | |
! | AAAGCACCTGGTTTACAAAA+AGG | + | chr3.4:80581565-80581584 | MS.gene067079:CDS | 35.0% |
! | AACTTTTGTGCTTAACAACG+TGG | - | chr3.4:80579158-80579177 | None:intergenic | 35.0% |
! | ACAGCTGTATATTGATTAGC+TGG | - | chr3.4:80582263-80582282 | None:intergenic | 35.0% |
! | AGTAATGGAAGCCAAAACAA+AGG | + | chr3.4:80578701-80578720 | MS.gene067079:CDS | 35.0% |
! | ATGCACAGTAATTTCAAGTC+GGG | + | chr3.4:80577930-80577949 | MS.gene067079:intron | 35.0% |
! | ATTGCTTAATGGATCTCTAC+AGG | - | chr3.4:80577778-80577797 | None:intergenic | 35.0% |
! | ATTTTCGCGAGCAATAACTT+CGG | + | chr3.4:80579094-80579113 | MS.gene067079:intron | 35.0% |
! | CAGTTCCTTAGAATGGTTTT+TGG | + | chr3.4:80580810-80580829 | MS.gene067079:intron | 35.0% |
! | CCCAATTTTTGATGTCCTAT+AGG | + | chr3.4:80580448-80580467 | MS.gene067079:intron | 35.0% |
! | GATGCACAGTAATTTCAAGT+CGG | + | chr3.4:80577929-80577948 | MS.gene067079:intron | 35.0% |
! | TGACAAAGCGTTAGTAGTAT+CGG | + | chr3.4:80576981-80577000 | MS.gene067079:CDS | 35.0% |
! | TTCCCAATGTGCTTTATTAG+AGG | + | chr3.4:80577692-80577711 | MS.gene067079:intron | 35.0% |
! | TTCTGATCTTTTCGATTCAC+AGG | + | chr3.4:80577390-80577409 | MS.gene067079:intron | 35.0% |
! | TTTTGTAAACCAGGTGCTTT+GGG | - | chr3.4:80581565-80581584 | None:intergenic | 35.0% |
! | TTTTTGTAAACCAGGTGCTT+TGG | - | chr3.4:80581566-80581585 | None:intergenic | 35.0% |
!! | CCTTGGTGTCAGTATTTAAT+AGG | - | chr3.4:80578824-80578843 | None:intergenic | 35.0% |
!! | CGGTTATTTTCACAAACAGT+TGG | - | chr3.4:80576806-80576825 | None:intergenic | 35.0% |
!! | GATACTGATACTGTTGATTC+TGG | + | chr3.4:80581893-80581912 | MS.gene067079:intron | 35.0% |
!! | GGAAGTTACTCTTTAAAGTG+AGG | - | chr3.4:80579742-80579761 | None:intergenic | 35.0% |
!! | TGGGCTCAAACCTTTTATTT+AGG | - | chr3.4:80581744-80581763 | None:intergenic | 35.0% |
!! | TGTTTTGGGTGATATAAGAG+CGG | - | chr3.4:80578081-80578100 | None:intergenic | 35.0% |
!!! | GGAGCAGTTTTTTTTTGTTG+AGG | + | chr3.4:80581651-80581670 | MS.gene067079:intron | 35.0% |
!!! | TGCTAGCTTTTGTTCATCAT+TGG | - | chr3.4:80581180-80581199 | None:intergenic | 35.0% |
AACACACGATCATCAACTGA+GGG | + | chr3.4:80577238-80577257 | MS.gene067079:CDS | 40.0% | |
AATAAAGTTGGGGAGGTAGA+AGG | + | chr3.4:80577200-80577219 | MS.gene067079:CDS | 40.0% | |
AATACTGACACCAAGGAATC+CGG | + | chr3.4:80578828-80578847 | MS.gene067079:CDS | 40.0% | |
ATGAAAATGCAAAGGTGGAG+TGG | - | chr3.4:80576714-80576733 | None:intergenic | 40.0% | |
CAAAGAAACAAGGCAGGAAT+TGG | + | chr3.4:80577504-80577523 | MS.gene067079:CDS | 40.0% | |
CATATTGGATGAGGAGAAAC+GGG | - | chr3.4:80578944-80578963 | None:intergenic | 40.0% | |
CATCAAGCGAAGAGTTCTTT+GGG | - | chr3.4:80580917-80580936 | None:intergenic | 40.0% | |
CCAATGCAGCAGTAAATGTA+TGG | - | chr3.4:80578444-80578463 | None:intergenic | 40.0% | |
CCATACATTTACTGCTGCAT+TGG | + | chr3.4:80578441-80578460 | MS.gene067079:intron | 40.0% | |
CGACTTTACTAGAACTTGTG+AGG | + | chr3.4:80581373-80581392 | MS.gene067079:intron | 40.0% | |
CTCGATAACCAATACTTCTG+AGG | - | chr3.4:80581967-80581986 | None:intergenic | 40.0% | |
GAGAGGCTAGACAATAAACA+TGG | - | chr3.4:80581354-80581373 | None:intergenic | 40.0% | |
GATTGAAAGATAGACTGTCG+CGG | - | chr3.4:80581932-80581951 | None:intergenic | 40.0% | |
GCATATTGGATGAGGAGAAA+CGG | - | chr3.4:80578945-80578964 | None:intergenic | 40.0% | |
GCGGCTAGAATCATATATGA+AGG | + | chr3.4:80582027-80582046 | MS.gene067079:CDS | 40.0% | |
GCTTCTGCACTACAAAAAGT+TGG | - | chr3.4:80578174-80578193 | None:intergenic | 40.0% | |
GGAAGTAAAACAAGCTGCAT+TGG | + | chr3.4:80578662-80578681 | MS.gene067079:CDS | 40.0% | |
TAACACACGATCATCAACTG+AGG | + | chr3.4:80577237-80577256 | MS.gene067079:CDS | 40.0% | |
TCGAGAAGACAATGGAAAGT+TGG | + | chr3.4:80581982-80582001 | MS.gene067079:CDS | 40.0% | |
TTCCAAAGCAGAGTCAACAT+CGG | - | chr3.4:80577162-80577181 | None:intergenic | 40.0% | |
TTTACTAGAACTTGTGAGGG+TGG | + | chr3.4:80581377-80581396 | MS.gene067079:intron | 40.0% | |
! | AGGTTTGAGCCCATTTTATC+TGG | + | chr3.4:80581751-80581770 | MS.gene067079:intron | 40.0% |
! | CAAGTTCTAGTAAAGTCGAG+AGG | - | chr3.4:80581371-80581390 | None:intergenic | 40.0% |
! | CCATGCGGATTTTGAATGTT+CGG | - | chr3.4:80582194-80582213 | None:intergenic | 40.0% |
! | CTTTTGTAGCTTCCTAGCTA+AGG | + | chr3.4:80581630-80581649 | MS.gene067079:intron | 40.0% |
! | GATCTTTTCGATTCACAGGA+TGG | + | chr3.4:80577394-80577413 | MS.gene067079:intron | 40.0% |
! | GGTTTGAGCCCATTTTATCT+GGG | + | chr3.4:80581752-80581771 | MS.gene067079:intron | 40.0% |
! | GTGATAACGTATTTGACTGC+AGG | - | chr3.4:80582567-80582586 | None:intergenic | 40.0% |
! | TAATGGATCTCTACAGGTAG+TGG | - | chr3.4:80577772-80577791 | None:intergenic | 40.0% |
! | TGCACAGTAATTTCAAGTCG+GGG | + | chr3.4:80577931-80577950 | MS.gene067079:intron | 40.0% |
!! | ATTCTCCAAAGCATTGAGCT+CGG | - | chr3.4:80576672-80576691 | None:intergenic | 40.0% |
!! | CATTTACTGCTGCATTGGTT+TGG | + | chr3.4:80578446-80578465 | MS.gene067079:intron | 40.0% |
!! | GAGAATCAGGCAAAGCATTT+TGG | - | chr3.4:80578967-80578986 | None:intergenic | 40.0% |
!! | GCATTTTGGCATATTGGATG+AGG | - | chr3.4:80578953-80578972 | None:intergenic | 40.0% |
!! | GGCAAAGCATTTTGGCATAT+TGG | - | chr3.4:80578959-80578978 | None:intergenic | 40.0% |
!! | GTTTTGGGTGATATAAGAGC+GGG | - | chr3.4:80578080-80578099 | None:intergenic | 40.0% |
!! | TACTTCCTCGGCTTTAAGTT+TGG | - | chr3.4:80578649-80578668 | None:intergenic | 40.0% |
!! | TGAATGATTGAGGGCATTGA+CGG | - | chr3.4:80580581-80580600 | None:intergenic | 40.0% |
!! | TTCCATTGCTGCCTTTGTTT+TGG | - | chr3.4:80578715-80578734 | None:intergenic | 40.0% |
!!! | AAAAGTTTTAGGCTAGTCGC+CGG | - | chr3.4:80578485-80578504 | None:intergenic | 40.0% |
!!! | TGCAGCTTGTTTTACTTCCT+CGG | - | chr3.4:80578661-80578680 | None:intergenic | 40.0% |
AAAACCCATACCGGATTCCT+TGG | - | chr3.4:80578841-80578860 | None:intergenic | 45.0% | |
AAAGGCTAAAGCTGAAGCAG+AGG | + | chr3.4:80578332-80578351 | MS.gene067079:CDS | 45.0% | |
AAGTGATGCAGCGTATGAAG+AGG | + | chr3.4:80578266-80578285 | MS.gene067079:CDS | 45.0% | |
AATTCTACTTTGCCCGCAGA+TGG | + | chr3.4:80582363-80582382 | MS.gene067079:intron | 45.0% | |
ACCATTTGTTTGAGTGAGGC+AGG | + | chr3.4:80577803-80577822 | MS.gene067079:intron | 45.0% | |
ACGACAGGTCCCATATGTAA+TGG | + | chr3.4:80581496-80581515 | MS.gene067079:intron | 45.0% | |
AGCCAAAACAAAGGCAGCAA+TGG | + | chr3.4:80578710-80578729 | MS.gene067079:CDS | 45.0% | |
AGGTGGAGTGGAAGAATTAG+CGG | - | chr3.4:80576702-80576721 | None:intergenic | 45.0% | |
CAACAGTATCAGTATCCCCA+CGG | - | chr3.4:80581889-80581908 | None:intergenic | 45.0% | |
CAACATGGTTGTGCTTCAAC+TGG | + | chr3.4:80581785-80581804 | MS.gene067079:intron | 45.0% | |
CATTTGTTTGAGTGAGGCAG+GGG | + | chr3.4:80577805-80577824 | MS.gene067079:intron | 45.0% | |
CCAAAGAACTCTTCGCTTGA+TGG | + | chr3.4:80580915-80580934 | MS.gene067079:intron | 45.0% | |
CCATCAAGCGAAGAGTTCTT+TGG | - | chr3.4:80580918-80580937 | None:intergenic | 45.0% | |
CCATTTGTTTGAGTGAGGCA+GGG | + | chr3.4:80577804-80577823 | MS.gene067079:intron | 45.0% | |
CCGAACATTCAAAATCCGCA+TGG | + | chr3.4:80582191-80582210 | MS.gene067079:CDS | 45.0% | |
CCTCCCCAACTTTATTCATC+AGG | - | chr3.4:80577196-80577215 | None:intergenic | 45.0% | |
CCTGATGAATAAAGTTGGGG+AGG | + | chr3.4:80577193-80577212 | MS.gene067079:CDS | 45.0% | |
CTGCAAAGCAACCTTTCTCT+TGG | - | chr3.4:80578292-80578311 | None:intergenic | 45.0% | |
CTGGGTCAAAAGAAGCAACA+TGG | + | chr3.4:80581770-80581789 | MS.gene067079:intron | 45.0% | |
GAAGACTACTGCATACATGC+AGG | + | chr3.4:80582495-80582514 | MS.gene067079:CDS | 45.0% | |
GATGAGGAGAAACGGGTAAA+GGG | - | chr3.4:80578937-80578956 | None:intergenic | 45.0% | |
GGGGCATAAGAGACAATGTT+AGG | + | chr3.4:80579869-80579888 | MS.gene067079:CDS | 45.0% | |
GTATGAAGAGGCCAAGAGAA+AGG | + | chr3.4:80578278-80578297 | MS.gene067079:CDS | 45.0% | |
TATAGATCAAGACACCGAGC+AGG | - | chr3.4:80579362-80579381 | None:intergenic | 45.0% | |
TTGTTTACCATCTGCACGAC+AGG | + | chr3.4:80581481-80581500 | MS.gene067079:intron | 45.0% | |
TTTCCCTGCTTCAAACTCAC+TGG | - | chr3.4:80581679-80581698 | None:intergenic | 45.0% | |
! | CAAGAGAAAGGTTGCTTTGC+AGG | + | chr3.4:80578290-80578309 | MS.gene067079:CDS | 45.0% |
! | GAACCAGTGAGTTTGAAGCA+GGG | + | chr3.4:80581673-80581692 | MS.gene067079:intron | 45.0% |
! | GAGGCATACCTCAGAAGTAT+TGG | + | chr3.4:80581956-80581975 | MS.gene067079:CDS | 45.0% |
! | TTGCTGCTTCTGATCCTGAT+TGG | + | chr3.4:80576627-80576646 | MS.gene067079:CDS | 45.0% |
!! | AGAGCATCGAAACTCCAATC+AGG | - | chr3.4:80576644-80576663 | None:intergenic | 45.0% |
!! | TTCCGATGTTGACTCTGCTT+TGG | + | chr3.4:80577157-80577176 | MS.gene067079:CDS | 45.0% |
!!! | TAAAAAATTCTAATTTTTTT+GGG | - | chr3.4:80580178-80580197 | None:intergenic | 5.0% |
!!! | TTAAAAAATTCTAATTTTTT+TGG | - | chr3.4:80580179-80580198 | None:intergenic | 5.0% |
AATCAGTGGGAGGAGTGGAA+TGG | - | chr3.4:80579339-80579358 | None:intergenic | 50.0% | |
AGAGCAAATCCAGCCATCTG+CGG | - | chr3.4:80582379-80582398 | None:intergenic | 50.0% | |
AGTTCTTTGGGCCTTGGAAG+TGG | - | chr3.4:80580905-80580924 | None:intergenic | 50.0% | |
CAACCTTCTTGCAAGCCATG+CGG | - | chr3.4:80582209-80582228 | None:intergenic | 50.0% | |
CAGTTCCTTCAAGTGCCAGA+AGG | + | chr3.4:80582535-80582554 | MS.gene067079:CDS | 50.0% | |
CCCTGCCTCACTCAAACAAA+TGG | - | chr3.4:80577807-80577826 | None:intergenic | 50.0% | |
CGCTGTCTGTCTCATACTCA+GGG | - | chr3.4:80576951-80576970 | None:intergenic | 50.0% | |
GACACCAAGGAATCCGGTAT+GGG | + | chr3.4:80578834-80578853 | MS.gene067079:intron | 50.0% | |
GCAGTAGTCTTCGCTGAATC+TGG | - | chr3.4:80582487-80582506 | None:intergenic | 50.0% | |
GCATAGTCAGCTGCTCAATC+AGG | - | chr3.4:80582150-80582169 | None:intergenic | 50.0% | |
GCCACGAGAGTGATATTTCC+CGG | + | chr3.4:80579830-80579849 | MS.gene067079:CDS | 50.0% | |
GCTGTCTGTCTCATACTCAG+GGG | - | chr3.4:80576950-80576969 | None:intergenic | 50.0% | |
GGAAATATCACTCTCGTGGC+GGG | - | chr3.4:80579830-80579849 | None:intergenic | 50.0% | |
GGATGAGGAGAAACGGGTAA+AGG | - | chr3.4:80578938-80578957 | None:intergenic | 50.0% | |
GGGAAATATCACTCTCGTGG+CGG | - | chr3.4:80579831-80579850 | None:intergenic | 50.0% | |
TCCGGGAAATATCACTCTCG+TGG | - | chr3.4:80579834-80579853 | None:intergenic | 50.0% | |
TCCTTCAAGTGCCAGAAGGA+AGG | + | chr3.4:80582539-80582558 | MS.gene067079:CDS | 50.0% | |
TCCTTCCTTCTGGCACTTGA+AGG | - | chr3.4:80582543-80582562 | None:intergenic | 50.0% | |
TCGCTGTCTGTCTCATACTC+AGG | - | chr3.4:80576952-80576971 | None:intergenic | 50.0% | |
TGACACCAAGGAATCCGGTA+TGG | + | chr3.4:80578833-80578852 | MS.gene067079:intron | 50.0% | |
TGAGTATGAGACAGACAGCG+AGG | + | chr3.4:80576951-80576970 | MS.gene067079:CDS | 50.0% | |
TGTGAGGGTGGTAGTCTTCA+AGG | + | chr3.4:80581389-80581408 | MS.gene067079:intron | 50.0% | |
! | AATCCGCATGGCTTGCAAGA+AGG | + | chr3.4:80582203-80582222 | MS.gene067079:CDS | 50.0% |
! | GAGAAAGGTTGCTTTGCAGG+AGG | + | chr3.4:80578293-80578312 | MS.gene067079:CDS | 50.0% |
! | GCATGGCTTGCAAGAAGGTT+GGG | + | chr3.4:80582208-80582227 | MS.gene067079:CDS | 50.0% |
! | GCGTTAGTAGTATCGGACAC+TGG | + | chr3.4:80576988-80577007 | MS.gene067079:CDS | 50.0% |
! | GGAACCAGTGAGTTTGAAGC+AGG | + | chr3.4:80581672-80581691 | MS.gene067079:intron | 50.0% |
! | TATGAAGGTGTACGGTGCAC+TGG | + | chr3.4:80582042-80582061 | MS.gene067079:CDS | 50.0% |
!! | ATTGCAAAGGGAGCACTAGC+AGG | - | chr3.4:80581295-80581314 | None:intergenic | 50.0% |
!! | GTAAACCAGGTGCTTTGGGA+CGG | - | chr3.4:80581561-80581580 | None:intergenic | 50.0% |
!! | TTGCAAAGGGAGCACTAGCA+GGG | - | chr3.4:80581294-80581313 | None:intergenic | 50.0% |
AGACACCGAGCAGGAATCAG+TGG | - | chr3.4:80579353-80579372 | None:intergenic | 55.0% | |
CGTCTCCGAGCTCAATGCTT+TGG | + | chr3.4:80576664-80576683 | MS.gene067079:CDS | 55.0% | |
CTGTCTCATACTCAGGGGCA+CGG | - | chr3.4:80576945-80576964 | None:intergenic | 55.0% | |
GACACCGAGCAGGAATCAGT+GGG | - | chr3.4:80579352-80579371 | None:intergenic | 55.0% | |
GACTGCAGGTTCCTTCCTTC+TGG | - | chr3.4:80582553-80582572 | None:intergenic | 55.0% | |
GAGCAAATCCAGCCATCTGC+GGG | - | chr3.4:80582378-80582397 | None:intergenic | 55.0% | |
GCAGGCCAAACTTAAAGCCG+AGG | + | chr3.4:80578641-80578660 | MS.gene067079:intron | 55.0% | |
GCGAAGAGTTCTTTGGGCCT+TGG | - | chr3.4:80580911-80580930 | None:intergenic | 55.0% | |
GGGGCAGGACGTCTTACATT+TGG | - | chr3.4:80577558-80577577 | None:intergenic | 55.0% | |
TATGGGACCTGTCGTGCAGA+TGG | - | chr3.4:80581491-80581510 | None:intergenic | 55.0% | |
! | CGCATGGCTTGCAAGAAGGT+TGG | + | chr3.4:80582207-80582226 | MS.gene067079:CDS | 55.0% |
! | TTACACCGTCCCAAAGCACC+TGG | + | chr3.4:80581553-80581572 | MS.gene067079:CDS | 55.0% |
!! | GGTGCTTTGGGACGGTGTAA+AGG | - | chr3.4:80581553-80581572 | None:intergenic | 55.0% |
!! | TCCTCCCACTGATTCCTGCT+CGG | + | chr3.4:80579345-80579364 | MS.gene067079:intron | 55.0% |
ACCGAGCAGGAATCAGTGGG+AGG | - | chr3.4:80579349-80579368 | None:intergenic | 60.0% | |
AGCACTAGCAGGGCTTGCAC+AGG | - | chr3.4:80581284-80581303 | None:intergenic | 60.0% | |
CTACTTTGCCCGCAGATGGC+TGG | + | chr3.4:80582367-80582386 | MS.gene067079:intron | 60.0% | |
GCAGGAATCAGTGGGAGGAG+TGG | - | chr3.4:80579344-80579363 | None:intergenic | 60.0% | |
GCTTGCAAGAAGGTTGGGCG+TGG | + | chr3.4:80582213-80582232 | MS.gene067079:CDS | 60.0% | |
! | AAGGTTGGGCGTGGCTTGCA+AGG | + | chr3.4:80582222-80582241 | MS.gene067079:CDS | 60.0% |
!! | GGTGTACGGTGCACTGGTTC+AGG | + | chr3.4:80582048-80582067 | MS.gene067079:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 80576596 | 80582603 | 80576596 | ID=MS.gene067079 |
chr3.4 | mRNA | 80576596 | 80582603 | 80576596 | ID=MS.gene067079.t1;Parent=MS.gene067079 |
chr3.4 | exon | 80576596 | 80576750 | 80576596 | ID=MS.gene067079.t1.exon1;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80576596 | 80576750 | 80576596 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80576891 | 80577043 | 80576891 | ID=MS.gene067079.t1.exon2;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80576891 | 80577043 | 80576891 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80577145 | 80577265 | 80577145 | ID=MS.gene067079.t1.exon3;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80577145 | 80577265 | 80577145 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80577412 | 80577560 | 80577412 | ID=MS.gene067079.t1.exon4;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80577412 | 80577560 | 80577412 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80578185 | 80578353 | 80578185 | ID=MS.gene067079.t1.exon5;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80578185 | 80578353 | 80578185 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80578645 | 80578849 | 80578645 | ID=MS.gene067079.t1.exon6;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80578645 | 80578849 | 80578645 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80579447 | 80579556 | 80579447 | ID=MS.gene067079.t1.exon7;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80579447 | 80579556 | 80579447 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80579820 | 80579890 | 80579820 | ID=MS.gene067079.t1.exon8;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80579820 | 80579890 | 80579820 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80580542 | 80580623 | 80580542 | ID=MS.gene067079.t1.exon9;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80580542 | 80580623 | 80580542 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80581271 | 80581345 | 80581271 | ID=MS.gene067079.t1.exon10;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80581271 | 80581345 | 80581271 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80581503 | 80581586 | 80581503 | ID=MS.gene067079.t1.exon11;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80581503 | 80581586 | 80581503 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80581938 | 80582069 | 80581938 | ID=MS.gene067079.t1.exon12;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80581938 | 80582069 | 80581938 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80582182 | 80582304 | 80582182 | ID=MS.gene067079.t1.exon13;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80582182 | 80582304 | 80582182 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
chr3.4 | exon | 80582382 | 80582603 | 80582382 | ID=MS.gene067079.t1.exon14;Parent=MS.gene067079.t1 |
chr3.4 | CDS | 80582382 | 80582603 | 80582382 | ID=cds.MS.gene067079.t1;Parent=MS.gene067079.t1 |
Gene Sequence |
Protein sequence |