Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067121.t1 | XP_003595584.1 | 94.5 | 330 | 16 | 1 | 1 | 330 | 1 | 328 | 7.60E-86 | 327.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067121.t1 | O65399 | 52.8 | 89 | 40 | 2 | 160 | 246 | 381 | 469 | 4.0e-19 | 97.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067121.t1 | G7IIX1 | 94.5 | 330 | 16 | 1 | 1 | 330 | 1 | 328 | 5.5e-86 | 327.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049239 | MS.gene067121 | 0.810231 | 1.28E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067121.t1 | MTR_2g049670 | 92.145 | 331 | 22 | 2 | 1 | 330 | 1 | 328 | 1.83e-148 | 421 |
MS.gene067121.t1 | MTR_5g091650 | 48.951 | 143 | 46 | 4 | 109 | 246 | 75 | 195 | 1.21e-32 | 120 |
MS.gene067121.t1 | MTR_5g091650 | 49.315 | 146 | 47 | 4 | 109 | 249 | 75 | 198 | 1.68e-32 | 122 |
MS.gene067121.t1 | MTR_3g048280 | 49.650 | 143 | 56 | 4 | 95 | 236 | 62 | 189 | 1.72e-32 | 120 |
MS.gene067121.t1 | MTR_7g111600 | 61.905 | 84 | 31 | 1 | 160 | 242 | 160 | 243 | 2.20e-31 | 119 |
MS.gene067121.t1 | MTR_7g111600 | 47.368 | 171 | 74 | 5 | 84 | 242 | 77 | 243 | 2.77e-31 | 119 |
MS.gene067121.t1 | MTR_7g111600 | 47.368 | 171 | 74 | 5 | 84 | 242 | 77 | 243 | 1.12e-30 | 118 |
MS.gene067121.t1 | MTR_1g084820 | 45.545 | 202 | 81 | 6 | 56 | 238 | 307 | 498 | 2.26e-30 | 121 |
MS.gene067121.t1 | MTR_1g084820 | 45.545 | 202 | 81 | 6 | 56 | 238 | 307 | 498 | 3.00e-30 | 121 |
MS.gene067121.t1 | MTR_8g088120 | 61.728 | 81 | 30 | 1 | 169 | 248 | 57 | 137 | 8.57e-29 | 111 |
MS.gene067121.t1 | MTR_8g085390 | 48.819 | 127 | 60 | 3 | 153 | 278 | 23 | 145 | 1.65e-28 | 109 |
MS.gene067121.t1 | MTR_8g089400 | 53.125 | 96 | 43 | 2 | 160 | 253 | 37 | 132 | 4.74e-27 | 104 |
MS.gene067121.t1 | MTR_8g089400 | 53.125 | 96 | 43 | 2 | 160 | 253 | 57 | 152 | 2.67e-26 | 103 |
MS.gene067121.t1 | MTR_5g097420 | 55.814 | 86 | 36 | 2 | 160 | 243 | 30 | 115 | 1.25e-24 | 97.1 |
MS.gene067121.t1 | MTR_4g132280 | 51.000 | 100 | 47 | 2 | 160 | 257 | 382 | 481 | 2.02e-24 | 103 |
MS.gene067121.t1 | MTR_8g085720 | 51.000 | 100 | 47 | 2 | 145 | 242 | 349 | 448 | 5.12e-24 | 102 |
MS.gene067121.t1 | MTR_4g079530 | 42.424 | 132 | 67 | 3 | 148 | 277 | 25 | 149 | 4.18e-23 | 94.7 |
MS.gene067121.t1 | MTR_8g085440 | 50.000 | 84 | 41 | 1 | 160 | 242 | 32 | 115 | 8.63e-23 | 92.0 |
MS.gene067121.t1 | MTR_8g085400 | 54.023 | 87 | 38 | 1 | 155 | 241 | 28 | 112 | 1.02e-22 | 91.7 |
MS.gene067121.t1 | MTR_4g133735 | 49.451 | 91 | 44 | 2 | 155 | 243 | 23 | 113 | 1.52e-22 | 91.3 |
MS.gene067121.t1 | MTR_4g079530 | 49.485 | 97 | 47 | 2 | 148 | 242 | 25 | 121 | 1.62e-22 | 91.7 |
MS.gene067121.t1 | MTR_1g056640 | 50.505 | 99 | 46 | 3 | 147 | 242 | 392 | 490 | 1.50e-21 | 95.5 |
MS.gene067121.t1 | MTR_1g116870 | 48.810 | 84 | 42 | 1 | 160 | 242 | 276 | 359 | 1.92e-21 | 94.0 |
MS.gene067121.t1 | MTR_4g133730 | 47.253 | 91 | 46 | 2 | 155 | 243 | 23 | 113 | 4.95e-21 | 87.0 |
MS.gene067121.t1 | MTR_5g085580 | 50.588 | 85 | 40 | 2 | 160 | 242 | 382 | 466 | 6.99e-21 | 93.2 |
MS.gene067121.t1 | MTR_8g085420 | 46.316 | 95 | 47 | 2 | 160 | 253 | 32 | 123 | 1.34e-20 | 86.7 |
MS.gene067121.t1 | MTR_3g083580 | 45.918 | 98 | 51 | 2 | 154 | 249 | 356 | 453 | 1.69e-20 | 92.4 |
MS.gene067121.t1 | MTR_1g031900 | 50.000 | 88 | 42 | 2 | 160 | 245 | 361 | 448 | 7.02e-19 | 87.4 |
MS.gene067121.t1 | MTR_1g022160 | 39.844 | 128 | 63 | 3 | 126 | 252 | 370 | 484 | 8.03e-19 | 87.4 |
MS.gene067121.t1 | MTR_5g015720 | 51.685 | 89 | 40 | 3 | 160 | 245 | 329 | 417 | 8.76e-19 | 87.0 |
MS.gene067121.t1 | MTR_1g022160 | 40.336 | 119 | 57 | 3 | 126 | 243 | 370 | 475 | 1.14e-18 | 87.0 |
MS.gene067121.t1 | MTR_5g044530 | 49.296 | 71 | 35 | 1 | 160 | 229 | 22 | 92 | 1.69e-18 | 84.0 |
MS.gene067121.t1 | MTR_3g082080 | 50.000 | 78 | 38 | 1 | 160 | 236 | 157 | 234 | 1.76e-18 | 83.6 |
MS.gene067121.t1 | MTR_8g102340 | 48.235 | 85 | 42 | 2 | 160 | 242 | 334 | 418 | 1.87e-18 | 86.3 |
MS.gene067121.t1 | MTR_1g031900 | 50.000 | 86 | 41 | 2 | 160 | 243 | 361 | 446 | 2.85e-18 | 85.9 |
MS.gene067121.t1 | MTR_6g088885 | 43.678 | 87 | 46 | 2 | 159 | 242 | 368 | 454 | 4.68e-18 | 85.1 |
MS.gene067121.t1 | MTR_4g083500 | 42.391 | 92 | 52 | 1 | 159 | 249 | 401 | 492 | 8.48e-18 | 84.3 |
MS.gene067121.t1 | MTR_4g069940 | 46.154 | 91 | 47 | 2 | 159 | 247 | 374 | 464 | 9.46e-18 | 84.0 |
MS.gene067121.t1 | MTR_5g078200 | 48.193 | 83 | 41 | 2 | 160 | 240 | 327 | 409 | 2.18e-17 | 83.2 |
MS.gene067121.t1 | MTR_5g078200 | 48.193 | 83 | 41 | 2 | 160 | 240 | 360 | 442 | 2.23e-17 | 83.2 |
MS.gene067121.t1 | MTR_4g109490 | 44.828 | 87 | 46 | 2 | 157 | 242 | 21 | 106 | 4.22e-17 | 79.3 |
MS.gene067121.t1 | MTR_1g022160 | 41.071 | 112 | 52 | 3 | 126 | 236 | 370 | 468 | 7.84e-17 | 81.3 |
MS.gene067121.t1 | MTR_4g083070 | 48.052 | 77 | 39 | 1 | 154 | 229 | 15 | 91 | 1.17e-16 | 77.4 |
MS.gene067121.t1 | MTR_3g065460 | 47.059 | 85 | 43 | 2 | 160 | 242 | 361 | 445 | 1.61e-16 | 80.5 |
MS.gene067121.t1 | MTR_3g116510 | 38.298 | 94 | 53 | 2 | 157 | 247 | 368 | 459 | 1.32e-14 | 74.7 |
MS.gene067121.t1 | MTR_3g116510 | 35.345 | 116 | 60 | 3 | 135 | 247 | 222 | 325 | 1.38e-14 | 73.9 |
MS.gene067121.t1 | MTR_4g088155 | 43.529 | 85 | 46 | 2 | 160 | 242 | 373 | 457 | 2.12e-14 | 73.9 |
MS.gene067121.t1 | MTR_7g053500 | 43.529 | 85 | 46 | 2 | 160 | 242 | 297 | 381 | 5.54e-14 | 72.4 |
MS.gene067121.t1 | MTR_7g053500 | 43.529 | 85 | 46 | 2 | 160 | 242 | 374 | 458 | 5.57e-14 | 72.8 |
MS.gene067121.t1 | MTR_8g012400 | 40.000 | 85 | 49 | 2 | 160 | 242 | 374 | 458 | 1.03e-13 | 72.0 |
MS.gene067121.t1 | MTR_8g012400 | 40.000 | 85 | 49 | 2 | 160 | 242 | 294 | 378 | 1.22e-13 | 71.6 |
MS.gene067121.t1 | MTR_7g026340 | 37.209 | 86 | 53 | 1 | 158 | 242 | 363 | 448 | 6.11e-13 | 69.7 |
MS.gene067121.t1 | MTR_2g072500 | 41.573 | 89 | 50 | 2 | 156 | 243 | 4 | 91 | 1.24e-12 | 63.5 |
MS.gene067121.t1 | MTR_4g134280 | 40.000 | 90 | 44 | 5 | 159 | 242 | 251 | 336 | 9.44e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067121.t1 | AT2G30933 | 58.947 | 95 | 38 | 1 | 156 | 249 | 78 | 172 | 5.16e-34 | 125 |
MS.gene067121.t1 | AT1G09460 | 60.638 | 94 | 35 | 2 | 157 | 249 | 133 | 225 | 5.08e-30 | 117 |
MS.gene067121.t1 | AT2G30933 | 60.976 | 82 | 31 | 1 | 156 | 236 | 78 | 159 | 5.78e-30 | 112 |
MS.gene067121.t1 | AT2G30933 | 60.976 | 82 | 31 | 1 | 156 | 236 | 78 | 159 | 5.78e-30 | 112 |
MS.gene067121.t1 | AT5G35740 | 52.747 | 91 | 38 | 4 | 157 | 243 | 27 | 116 | 1.29e-24 | 97.1 |
MS.gene067121.t1 | AT4G13600 | 43.411 | 129 | 60 | 3 | 157 | 272 | 58 | 186 | 5.48e-24 | 98.6 |
MS.gene067121.t1 | AT4G05430 | 47.778 | 90 | 45 | 2 | 160 | 247 | 23 | 112 | 4.06e-23 | 93.6 |
MS.gene067121.t1 | AT4G05430 | 47.778 | 90 | 45 | 2 | 160 | 247 | 48 | 137 | 4.98e-23 | 94.4 |
MS.gene067121.t1 | AT1G11820 | 49.000 | 100 | 49 | 2 | 160 | 257 | 381 | 480 | 3.03e-22 | 97.4 |
MS.gene067121.t1 | AT1G18650 | 42.063 | 126 | 70 | 2 | 154 | 278 | 15 | 138 | 8.18e-22 | 91.3 |
MS.gene067121.t1 | AT4G26830 | 50.588 | 85 | 40 | 2 | 160 | 242 | 371 | 455 | 1.12e-21 | 95.5 |
MS.gene067121.t1 | AT5G63250 | 45.652 | 92 | 46 | 2 | 157 | 244 | 39 | 130 | 1.36e-21 | 89.4 |
MS.gene067121.t1 | AT4G26830 | 50.588 | 85 | 40 | 2 | 160 | 242 | 367 | 451 | 1.42e-21 | 95.1 |
MS.gene067121.t1 | AT2G05790 | 54.118 | 85 | 37 | 2 | 160 | 242 | 384 | 468 | 2.11e-21 | 94.7 |
MS.gene067121.t1 | AT2G42930 | 47.727 | 88 | 45 | 1 | 160 | 247 | 40 | 126 | 2.14e-21 | 89.0 |
MS.gene067121.t1 | AT4G34480 | 47.619 | 84 | 43 | 1 | 160 | 242 | 253 | 336 | 2.97e-21 | 94.0 |
MS.gene067121.t1 | AT4G34480 | 47.619 | 84 | 43 | 1 | 160 | 242 | 364 | 447 | 3.70e-21 | 94.4 |
MS.gene067121.t1 | AT1G18650 | 46.154 | 91 | 48 | 1 | 153 | 242 | 14 | 104 | 5.03e-21 | 87.8 |
MS.gene067121.t1 | AT1G79480 | 45.977 | 87 | 46 | 1 | 157 | 242 | 308 | 394 | 7.50e-21 | 92.8 |
MS.gene067121.t1 | AT1G79480 | 45.977 | 87 | 46 | 1 | 157 | 242 | 307 | 393 | 7.66e-21 | 92.8 |
MS.gene067121.t1 | AT5G67460 | 48.864 | 88 | 43 | 2 | 157 | 242 | 290 | 377 | 1.09e-20 | 92.0 |
MS.gene067121.t1 | AT5G55180 | 50.588 | 85 | 40 | 2 | 160 | 242 | 372 | 456 | 2.10e-20 | 92.0 |
MS.gene067121.t1 | AT2G01630 | 50.588 | 85 | 40 | 2 | 160 | 242 | 360 | 444 | 4.29e-20 | 91.3 |
MS.gene067121.t1 | AT1G66250 | 49.438 | 89 | 43 | 2 | 160 | 246 | 368 | 456 | 5.29e-20 | 90.9 |
MS.gene067121.t1 | AT3G58100 | 47.191 | 89 | 45 | 2 | 160 | 246 | 41 | 129 | 7.22e-20 | 85.9 |
MS.gene067121.t1 | AT5G24318 | 40.860 | 93 | 54 | 1 | 154 | 245 | 227 | 319 | 8.26e-20 | 89.0 |
MS.gene067121.t1 | AT3G13560 | 34.759 | 187 | 118 | 3 | 83 | 267 | 285 | 469 | 8.70e-20 | 90.5 |
MS.gene067121.t1 | AT3G13560 | 34.759 | 187 | 118 | 3 | 83 | 267 | 285 | 469 | 8.70e-20 | 90.5 |
MS.gene067121.t1 | AT3G13560 | 34.759 | 187 | 118 | 3 | 83 | 267 | 285 | 469 | 8.70e-20 | 90.5 |
MS.gene067121.t1 | AT3G13560 | 34.759 | 187 | 118 | 3 | 83 | 267 | 285 | 469 | 8.70e-20 | 90.5 |
MS.gene067121.t1 | AT3G13560 | 34.759 | 187 | 118 | 3 | 83 | 267 | 285 | 469 | 8.70e-20 | 90.5 |
MS.gene067121.t1 | AT2G04910 | 47.727 | 88 | 44 | 2 | 158 | 243 | 13 | 100 | 9.25e-20 | 83.6 |
MS.gene067121.t1 | AT5G24318 | 40.860 | 93 | 54 | 1 | 154 | 245 | 366 | 458 | 9.58e-20 | 90.1 |
MS.gene067121.t1 | AT4G05430 | 49.367 | 79 | 38 | 2 | 160 | 236 | 48 | 126 | 1.44e-19 | 83.6 |
MS.gene067121.t1 | AT3G58100 | 47.191 | 89 | 45 | 2 | 160 | 246 | 117 | 205 | 4.19e-19 | 85.9 |
MS.gene067121.t1 | AT4G29360 | 47.727 | 88 | 44 | 2 | 157 | 242 | 398 | 485 | 6.09e-19 | 87.8 |
MS.gene067121.t1 | AT4G29360 | 47.727 | 88 | 44 | 2 | 157 | 242 | 388 | 475 | 6.75e-19 | 87.8 |
MS.gene067121.t1 | AT5G63225 | 44.828 | 87 | 47 | 1 | 157 | 242 | 22 | 108 | 7.53e-19 | 81.3 |
MS.gene067121.t1 | AT1G66855 | 43.023 | 86 | 47 | 2 | 160 | 243 | 26 | 111 | 1.12e-18 | 80.9 |
MS.gene067121.t1 | AT1G66870 | 44.578 | 83 | 44 | 2 | 160 | 240 | 26 | 108 | 1.56e-18 | 80.5 |
MS.gene067121.t1 | AT5G61130 | 42.400 | 125 | 70 | 2 | 154 | 277 | 15 | 138 | 1.79e-18 | 82.8 |
MS.gene067121.t1 | AT1G66870 | 44.578 | 83 | 44 | 2 | 160 | 240 | 53 | 135 | 2.71e-18 | 80.5 |
MS.gene067121.t1 | AT5G67460 | 50.000 | 82 | 39 | 2 | 157 | 236 | 290 | 371 | 2.91e-18 | 85.1 |
MS.gene067121.t1 | AT5G56590 | 47.059 | 85 | 43 | 2 | 160 | 242 | 369 | 453 | 3.22e-18 | 85.9 |
MS.gene067121.t1 | AT1G66852 | 42.683 | 82 | 46 | 1 | 160 | 240 | 26 | 107 | 3.78e-18 | 79.3 |
MS.gene067121.t1 | AT2G16230 | 42.857 | 84 | 47 | 1 | 160 | 242 | 366 | 449 | 4.11e-18 | 85.5 |
MS.gene067121.t1 | AT5G63240 | 42.391 | 92 | 49 | 2 | 157 | 244 | 37 | 128 | 5.49e-18 | 79.3 |
MS.gene067121.t1 | AT1G11820 | 51.899 | 79 | 36 | 2 | 160 | 236 | 381 | 459 | 1.05e-17 | 84.0 |
MS.gene067121.t1 | AT2G01630 | 50.633 | 79 | 37 | 2 | 160 | 236 | 360 | 438 | 1.35e-17 | 83.6 |
MS.gene067121.t1 | AT5G55180 | 51.807 | 83 | 37 | 3 | 158 | 237 | 369 | 451 | 2.41e-17 | 82.8 |
MS.gene067121.t1 | AT3G55430 | 34.862 | 109 | 61 | 2 | 144 | 242 | 341 | 449 | 5.31e-17 | 82.0 |
MS.gene067121.t1 | AT1G26450 | 38.462 | 156 | 70 | 5 | 161 | 291 | 22 | 176 | 1.37e-16 | 77.4 |
MS.gene067121.t1 | AT5G24318 | 41.667 | 84 | 48 | 1 | 154 | 236 | 366 | 449 | 2.68e-16 | 79.7 |
MS.gene067121.t1 | AT1G69295 | 50.704 | 71 | 33 | 2 | 160 | 229 | 21 | 90 | 3.35e-16 | 77.0 |
MS.gene067121.t1 | AT4G09462 | 37.079 | 89 | 55 | 1 | 157 | 244 | 26 | 114 | 5.84e-16 | 73.6 |
MS.gene067121.t1 | AT1G69295 | 50.704 | 71 | 33 | 2 | 160 | 229 | 17 | 86 | 6.00e-16 | 76.3 |
MS.gene067121.t1 | AT2G04910 | 46.914 | 81 | 41 | 2 | 158 | 236 | 13 | 93 | 1.58e-15 | 72.4 |
MS.gene067121.t1 | AT4G09465 | 35.955 | 89 | 56 | 1 | 157 | 244 | 28 | 116 | 2.02e-15 | 72.0 |
MS.gene067121.t1 | AT4G09467 | 35.955 | 89 | 56 | 1 | 157 | 244 | 28 | 116 | 2.44e-15 | 71.6 |
MS.gene067121.t1 | AT4G09464 | 35.955 | 89 | 56 | 1 | 157 | 244 | 28 | 116 | 2.44e-15 | 71.6 |
MS.gene067121.t1 | AT5G08000 | 42.529 | 87 | 49 | 1 | 157 | 242 | 18 | 104 | 7.14e-15 | 72.4 |
MS.gene067121.t1 | AT5G63230 | 39.759 | 83 | 49 | 1 | 159 | 240 | 25 | 107 | 1.27e-14 | 69.7 |
MS.gene067121.t1 | AT5G08000 | 42.857 | 84 | 47 | 1 | 160 | 242 | 40 | 123 | 2.60e-14 | 71.2 |
MS.gene067121.t1 | AT3G07320 | 44.706 | 85 | 45 | 2 | 160 | 242 | 371 | 455 | 3.50e-14 | 73.6 |
MS.gene067121.t1 | AT4G16165 | 38.372 | 86 | 51 | 2 | 160 | 243 | 26 | 111 | 4.31e-14 | 68.2 |
MS.gene067121.t1 | AT4G09090 | 37.079 | 89 | 55 | 1 | 157 | 244 | 28 | 116 | 6.93e-14 | 67.8 |
MS.gene067121.t1 | AT3G23770 | 43.529 | 85 | 46 | 2 | 160 | 242 | 387 | 471 | 1.04e-13 | 72.0 |
MS.gene067121.t1 | AT2G29735 | 42.697 | 89 | 48 | 2 | 155 | 240 | 26 | 114 | 1.55e-13 | 66.6 |
MS.gene067121.t1 | AT2G03505 | 34.000 | 100 | 49 | 2 | 157 | 256 | 18 | 100 | 1.56e-13 | 68.2 |
MS.gene067121.t1 | AT2G03505 | 34.000 | 100 | 49 | 2 | 157 | 256 | 18 | 100 | 1.56e-13 | 68.2 |
MS.gene067121.t1 | AT2G03505 | 34.000 | 100 | 49 | 2 | 157 | 256 | 18 | 100 | 1.56e-13 | 68.2 |
MS.gene067121.t1 | AT4G09466 | 32.967 | 91 | 60 | 1 | 155 | 244 | 26 | 116 | 2.20e-13 | 66.2 |
MS.gene067121.t1 | AT2G03505 | 34.000 | 100 | 49 | 2 | 157 | 256 | 18 | 100 | 4.68e-13 | 65.5 |
MS.gene067121.t1 | AT5G53600 | 39.286 | 84 | 49 | 2 | 160 | 242 | 29 | 111 | 1.20e-12 | 63.9 |
MS.gene067121.t1 | AT5G53610 | 41.667 | 84 | 47 | 2 | 160 | 242 | 28 | 110 | 1.22e-12 | 63.9 |
MS.gene067121.t1 | AT2G39640 | 35.294 | 85 | 54 | 1 | 157 | 240 | 457 | 541 | 1.24e-12 | 68.9 |
MS.gene067121.t1 | AT2G39640 | 35.294 | 85 | 54 | 1 | 157 | 240 | 356 | 440 | 1.64e-11 | 65.5 |
MS.gene067121.t1 | AT2G19440 | 42.045 | 88 | 43 | 5 | 159 | 242 | 361 | 444 | 1.47e-12 | 68.6 |
MS.gene067121.t1 | AT2G19440 | 42.045 | 88 | 43 | 5 | 159 | 242 | 361 | 444 | 1.47e-12 | 68.6 |
MS.gene067121.t1 | AT1G13830 | 39.437 | 71 | 42 | 1 | 160 | 229 | 21 | 91 | 1.38e-11 | 63.2 |
MS.gene067121.t1 | AT1G13830 | 39.437 | 71 | 42 | 1 | 160 | 229 | 35 | 105 | 1.53e-11 | 63.5 |
MS.gene067121.t1 | AT1G78520 | 38.824 | 85 | 50 | 2 | 160 | 243 | 32 | 115 | 2.78e-11 | 60.5 |
Find 105 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATGATCTTTCAAAGTATT+TGG | 0.103855 | 2.4:-41884057 | None:intergenic |
GGGCTTGTTGTGCCTGTGTC+TGG | 0.191361 | 2.4:-41883703 | None:intergenic |
GAAGTTGATGAGGCTATATT+AGG | 0.226288 | 2.4:-41884713 | None:intergenic |
CCTCCTGTTCCTGGTGTTGT+AGG | 0.230252 | 2.4:-41883607 | None:intergenic |
AAATTCTCACCTTGTTGTTT+TGG | 0.240571 | 2.4:-41884452 | None:intergenic |
TTGGATTATGCTTGTGGATA+TGG | 0.261053 | 2.4:+41883991 | MS.gene067121:CDS |
GCACCTACAAGTTGTGTATT+TGG | 0.264956 | 2.4:+41884117 | MS.gene067121:CDS |
AGCTGCAGAGACTACTTTAA+AGG | 0.280134 | 2.4:+41883963 | MS.gene067121:CDS |
TGAATCTTCTCTTAATCTTA+TGG | 0.280733 | 2.4:-41883536 | None:intergenic |
GGGCTTGTTGGGTTTGAGTA+TGG | 0.288454 | 2.4:-41883823 | None:intergenic |
CTATGTCTTTCCCTCTGTTC+AGG | 0.289191 | 2.4:+41882529 | MS.gene067121:CDS |
GACTACTTTAAAGGTAGCTT+TGG | 0.305217 | 2.4:+41883972 | MS.gene067121:CDS |
CTTGTTGGAGTTGTTGTAGT+TGG | 0.311943 | 2.4:-41883844 | None:intergenic |
GTTTGTCCAGTACTTGTATC+AGG | 0.327363 | 2.4:-41883670 | None:intergenic |
GGTGTTGTGGGAGTCACATT+TGG | 0.328603 | 2.4:-41883868 | None:intergenic |
GAACTTGGTGGGTTTGAGTA+TGG | 0.330703 | 2.4:-41883793 | None:intergenic |
GAGGTTGGTGGGTTTGAGTA+TGG | 0.333201 | 2.4:-41883733 | None:intergenic |
CATGATCTTTCAAAGTATTT+GGG | 0.337641 | 2.4:-41884056 | None:intergenic |
TAAGGATTTCCTCCTGTTCC+TGG | 0.340078 | 2.4:-41883616 | None:intergenic |
GGGTTTGAGTATGGATTTGT+TGG | 0.343138 | 2.4:-41883724 | None:intergenic |
GTTGTTGTAGTTGGGCTTGT+TGG | 0.343594 | 2.4:-41883835 | None:intergenic |
GTTGTGCCTGTGTCTGGGCT+TGG | 0.347378 | 2.4:-41883697 | None:intergenic |
GGCTTGTTGTGCCTGTGTCT+GGG | 0.359856 | 2.4:-41883702 | None:intergenic |
TGCCTGTGTCTGGGCTTGGT+GGG | 0.363479 | 2.4:-41883693 | None:intergenic |
CCTCCAAATACACAACTTGT+AGG | 0.370834 | 2.4:-41884120 | None:intergenic |
AGAAGCTGGTGGGTTTGAAT+AGG | 0.373420 | 2.4:-41883764 | None:intergenic |
TTGTTGTAGTTGGGCTTGTT+GGG | 0.380851 | 2.4:-41883834 | None:intergenic |
GGAGATGTTGGGTTTATAGT+AGG | 0.382143 | 2.4:-41883640 | None:intergenic |
GGAGTCACATTTGGGCTTGT+TGG | 0.384264 | 2.4:-41883859 | None:intergenic |
GTGCCTGTGTCTGGGCTTGG+TGG | 0.388453 | 2.4:-41883694 | None:intergenic |
GTTGGGTTTATAGTAGGATA+AGG | 0.392906 | 2.4:-41883634 | None:intergenic |
CCACCAGATGATCCTGTTCC+TGG | 0.395410 | 2.4:-41883889 | None:intergenic |
GGATCATCTGGTGGTGGTGG+TGG | 0.399836 | 2.4:+41883898 | MS.gene067121:CDS |
AAGTTGATGAGGCTATATTA+GGG | 0.410837 | 2.4:-41884712 | None:intergenic |
TCAGGTGGTTGAGGAGATGT+TGG | 0.416066 | 2.4:-41883652 | None:intergenic |
GGAGGATCTTCATCAGTCTA+TGG | 0.417326 | 2.4:+41884671 | MS.gene067121:CDS |
GTGTTGTGGGAGTCACATTT+GGG | 0.421820 | 2.4:-41883867 | None:intergenic |
CTCCTGTTCCTGGTGTTGTA+GGG | 0.421839 | 2.4:-41883606 | None:intergenic |
CAGGTGGTTGAGGAGATGTT+GGG | 0.426565 | 2.4:-41883651 | None:intergenic |
TTGTTGGAGTTGTTGTAGTT+GGG | 0.434457 | 2.4:-41883843 | None:intergenic |
GCCTGTGTCTGGGCTTGGTG+GGG | 0.436540 | 2.4:-41883692 | None:intergenic |
GAAGCTGGTGGGTTTGAATA+GGG | 0.441448 | 2.4:-41883763 | None:intergenic |
AACCCTACAACACCAGGAAC+AGG | 0.450399 | 2.4:+41883604 | MS.gene067121:CDS |
GGTTTGAGTATGGATTTGTT+GGG | 0.453799 | 2.4:-41883723 | None:intergenic |
GAGTATGGATTTGTAGAAGC+TGG | 0.464844 | 2.4:-41883778 | None:intergenic |
TCTATATTGTTTCAGGTCAT+GGG | 0.468762 | 2.4:+41884410 | MS.gene067121:intron |
GAGTATGGATTTGTTGAACT+TGG | 0.470965 | 2.4:-41883808 | None:intergenic |
GTGGAGTCATACTACTTGGT+GGG | 0.472174 | 2.4:-41884622 | None:intergenic |
GATCCTGTTCCTGGTGTTGT+GGG | 0.480455 | 2.4:-41883880 | None:intergenic |
ACACCAGGAACAGGATCATC+TGG | 0.480901 | 2.4:+41883886 | MS.gene067121:CDS |
AGGGACTTGTAGAGGTTGGT+GGG | 0.484204 | 2.4:-41883744 | None:intergenic |
GTGGTGGTGGTAGTGGTCAG+TGG | 0.487996 | 2.4:+41883923 | MS.gene067121:CDS |
TATGGATTTGTTGAACTTGG+TGG | 0.489297 | 2.4:-41883805 | None:intergenic |
GGTGTTGTAGGGTTCACAAT+AGG | 0.490997 | 2.4:-41883595 | None:intergenic |
ACTCCCACAACACCAGGAAC+AGG | 0.492125 | 2.4:+41883877 | MS.gene067121:CDS |
GAAGATCCTCCATCAGGATC+AGG | 0.492646 | 2.4:-41884659 | None:intergenic |
GAATAGGGACTTGTAGAGGT+TGG | 0.497717 | 2.4:-41883748 | None:intergenic |
TAGGGACTTGTAGAGGTTGG+TGG | 0.498204 | 2.4:-41883745 | None:intergenic |
GGTGGAGTCATACTACTTGG+TGG | 0.503748 | 2.4:-41884623 | None:intergenic |
ACAGGATCATCTGGTGGTGG+TGG | 0.506368 | 2.4:+41883895 | MS.gene067121:CDS |
GTAGCTTTGGATTATGCTTG+TGG | 0.506964 | 2.4:+41883985 | MS.gene067121:CDS |
CTTGGTGGGGTCATAGTAGT+TGG | 0.507780 | 2.4:-41884608 | None:intergenic |
TGATCCTGTTCCTGGTGTTG+TGG | 0.511505 | 2.4:-41883881 | None:intergenic |
ACTGATGAAGATCCTCCATC+AGG | 0.512268 | 2.4:-41884665 | None:intergenic |
GCTATATTAGGGCTTCCTCC+TGG | 0.517344 | 2.4:-41884701 | None:intergenic |
ACCCCACCAAGCCCAGACAC+AGG | 0.517368 | 2.4:+41883691 | MS.gene067121:CDS |
ATGGATTTGTTGAACTTGGT+GGG | 0.527334 | 2.4:-41883804 | None:intergenic |
CTAGGTGGAGTCATAGTAGT+TGG | 0.529430 | 2.4:-41884584 | None:intergenic |
TCAGTCTATGGTTCACCACC+AGG | 0.530618 | 2.4:+41884683 | MS.gene067121:CDS |
ATGGATTTGTAGAAGCTGGT+GGG | 0.535192 | 2.4:-41883774 | None:intergenic |
TCAGGCATTGTCATGCTTGG+TGG | 0.535375 | 2.4:-41884641 | None:intergenic |
CTTGGTGGAGTCATACTACT+TGG | 0.535914 | 2.4:-41884626 | None:intergenic |
CAACCACCTGATACAAGTAC+TGG | 0.538231 | 2.4:+41883664 | MS.gene067121:CDS |
GGATCAGGCATTGTCATGCT+TGG | 0.540422 | 2.4:-41884644 | None:intergenic |
GCACATGAAGTGTAGCATAG+AGG | 0.541615 | 2.4:-41884766 | None:intergenic |
AAGAAATGGGAGCTAGAAGT+TGG | 0.544857 | 2.4:+41882488 | None:intergenic |
GTACTTGTATCAGGTGGTTG+AGG | 0.550652 | 2.4:-41883661 | None:intergenic |
GGGGTCATAGTAGTTGGACT+AGG | 0.565638 | 2.4:-41884602 | None:intergenic |
GTGGAGTCATAGTAGTTGGT+GGG | 0.565923 | 2.4:-41884580 | None:intergenic |
CCTACAAGTTGTGTATTTGG+AGG | 0.565962 | 2.4:+41884120 | MS.gene067121:CDS |
AATGTGACTCCCACAACACC+AGG | 0.569381 | 2.4:+41883871 | MS.gene067121:CDS |
TAAAATCACACCTGAACAGA+GGG | 0.572156 | 2.4:-41882539 | None:intergenic |
AATACACAACTTGTAGGTGC+AGG | 0.573202 | 2.4:-41884114 | None:intergenic |
TGTAGTGAGTAGGAACAGAA+TGG | 0.574812 | 2.4:-41884741 | None:intergenic |
GGTGGAGTCATAGTAGTTGG+TGG | 0.575064 | 2.4:-41884581 | None:intergenic |
GTCATAGTAGTTGGACTAGG+TGG | 0.577026 | 2.4:-41884599 | None:intergenic |
TGTCCAGTACTTGTATCAGG+TGG | 0.578521 | 2.4:-41883667 | None:intergenic |
ATAAAATCACACCTGAACAG+AGG | 0.579833 | 2.4:-41882540 | None:intergenic |
CATAGAGGCTTGTAGTGAGT+AGG | 0.580025 | 2.4:-41884751 | None:intergenic |
GTTGGTGGGCTTACATATGT+TGG | 0.617811 | 2.4:-41884566 | None:intergenic |
GGAACAGGATCATCTGGTGG+TGG | 0.620332 | 2.4:+41883892 | MS.gene067121:CDS |
ATTGTGAACCCTACAACACC+AGG | 0.620914 | 2.4:+41883598 | MS.gene067121:CDS |
ATGACAATGCCTGATCCTGA+TGG | 0.624431 | 2.4:+41884650 | MS.gene067121:CDS |
CCTACAACACCAGGAACAGG+AGG | 0.624591 | 2.4:+41883607 | MS.gene067121:CDS |
TGGAGTCATACTACTTGGTG+GGG | 0.627266 | 2.4:-41884621 | None:intergenic |
TATGGATTTGTAGAAGCTGG+TGG | 0.627475 | 2.4:-41883775 | None:intergenic |
AATGGAATAAGAAGTTGATG+AGG | 0.629157 | 2.4:-41884723 | None:intergenic |
ATATTAGGGCTTCCTCCTGG+TGG | 0.632131 | 2.4:-41884698 | None:intergenic |
GTTTGAATAGGGACTTGTAG+AGG | 0.646608 | 2.4:-41883752 | None:intergenic |
TCTCATCCTCCAAAACAACA+AGG | 0.698612 | 2.4:+41884443 | MS.gene067121:CDS |
CCAGGAACAGGATCATCTGG+TGG | 0.699045 | 2.4:+41883889 | MS.gene067121:CDS |
GATTGTTCACAACTTCAACA+AGG | 0.714222 | 2.4:+41884018 | MS.gene067121:CDS |
GTCTATGGTTCACCACCAGG+AGG | 0.724042 | 2.4:+41884686 | MS.gene067121:CDS |
ACAATGCCTGATCCTGATGG+AGG | 0.725256 | 2.4:+41884653 | MS.gene067121:CDS |
TGTTCACAACTTCAACAAGG+AGG | 0.728282 | 2.4:+41884021 | MS.gene067121:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAATTAAGTTGTATGTATT+TGG | + | chr2.4:41882806-41882825 | MS.gene067121:intron | 15.0% |
!!! | ATATCTATATTTTGTTTTAC+AGG | + | chr2.4:41883502-41883521 | MS.gene067121:intron | 15.0% |
!!! | TATTTTTATGGATTCAATTT+TGG | - | chr2.4:41883028-41883047 | None:intergenic | 15.0% |
!! | AAGGATAATACATATATTAG+AGG | - | chr2.4:41884527-41884546 | None:intergenic | 20.0% |
!! | ACTTATTCATTAATTCAATC+AGG | + | chr2.4:41883437-41883456 | MS.gene067121:intron | 20.0% |
!! | ATCATGATGAATTGATATTA+AGG | - | chr2.4:41884201-41884220 | None:intergenic | 20.0% |
!!! | ATATTTTGTTTTACAGGTTT+AGG | + | chr2.4:41883508-41883527 | MS.gene067121:intron | 20.0% |
!!! | GTTATTTTCTATATTGTTTC+AGG | + | chr2.4:41884403-41884422 | MS.gene067121:intron | 20.0% |
!!! | GTTTTTATGCATTACTAATA+AGG | - | chr2.4:41884499-41884518 | None:intergenic | 20.0% |
! | AATTCATCATGATCATTGAA+CGG | + | chr2.4:41884208-41884227 | MS.gene067121:intron | 25.0% |
! | AGATATTCATACAACATTGA+AGG | + | chr2.4:41884175-41884194 | MS.gene067121:intron | 25.0% |
! | ATATCCAAAATGACAACATT+TGG | + | chr2.4:41883090-41883109 | MS.gene067121:intron | 25.0% |
! | TACTTGATTTAGATCATGTT+TGG | - | chr2.4:41884375-41884394 | None:intergenic | 25.0% |
! | TATTAACATAAGCTAGTTGT+AGG | + | chr2.4:41883363-41883382 | MS.gene067121:intron | 25.0% |
! | TGAATCTTCTCTTAATCTTA+TGG | - | chr2.4:41883539-41883558 | None:intergenic | 25.0% |
! | TGTTGTATGAATATCTTACT+TGG | - | chr2.4:41884171-41884190 | None:intergenic | 25.0% |
!! | ACAGATTTTAAATCGTAGTT+GGG | - | chr2.4:41883291-41883310 | None:intergenic | 25.0% |
!! | CATGATCTTTCAAAGTATTT+GGG | - | chr2.4:41884059-41884078 | None:intergenic | 25.0% |
!! | GTAGAGAAGTATATATTGAA+AGG | - | chr2.4:41882588-41882607 | None:intergenic | 25.0% |
!! | TACAGATTTTAAATCGTAGT+TGG | - | chr2.4:41883292-41883311 | None:intergenic | 25.0% |
!! | TATACTTCTCTACGTTTTAT+AGG | + | chr2.4:41882595-41882614 | MS.gene067121:intron | 25.0% |
!! | TTCAACTGATAAGTTGAATT+TGG | + | chr2.4:41883333-41883352 | MS.gene067121:intron | 25.0% |
!!! | TGGTACAAGACTTATTTTTA+TGG | - | chr2.4:41883040-41883059 | None:intergenic | 25.0% |
AATAGTTGTGTTGTGTGATA+AGG | + | chr2.4:41882646-41882665 | MS.gene067121:intron | 30.0% | |
AGAAAAAACAAGCATGTACA+TGG | - | chr2.4:41883060-41883079 | None:intergenic | 30.0% | |
AGACATAGCAAAAATAAGAC+AGG | - | chr2.4:41882517-41882536 | None:intergenic | 30.0% | |
GACATAGCAAAAATAAGACA+GGG | - | chr2.4:41882516-41882535 | None:intergenic | 30.0% | |
! | GCATGATCTTTCAAAGTATT+TGG | - | chr2.4:41884060-41884079 | None:intergenic | 30.0% |
! | TCTATATTGTTTCAGGTCAT+GGG | + | chr2.4:41884410-41884429 | MS.gene067121:intron | 30.0% |
! | TTCTATATTGTTTCAGGTCA+TGG | + | chr2.4:41884409-41884428 | MS.gene067121:intron | 30.0% |
!! | AAGTTGATGAGGCTATATTA+GGG | - | chr2.4:41884715-41884734 | None:intergenic | 30.0% |
!! | AATGGAATAAGAAGTTGATG+AGG | - | chr2.4:41884726-41884745 | None:intergenic | 30.0% |
!! | GAATCCAAATGTTGTCATTT+TGG | - | chr2.4:41883097-41883116 | None:intergenic | 30.0% |
!!! | AAATTCTCACCTTGTTGTTT+TGG | - | chr2.4:41884455-41884474 | None:intergenic | 30.0% |
AACATAAGCTAGTTGTAGGA+AGG | + | chr2.4:41883367-41883386 | MS.gene067121:intron | 35.0% | |
ACATGTGTTAATGTTGTGTC+AGG | - | chr2.4:41884268-41884287 | None:intergenic | 35.0% | |
AGCATAAACGTTTGTCATGT+AGG | - | chr2.4:41884330-41884349 | None:intergenic | 35.0% | |
AGTTGGGATCTTCGATATTA+TGG | - | chr2.4:41883275-41883294 | None:intergenic | 35.0% | |
ATAAAATCACACCTGAACAG+AGG | - | chr2.4:41882543-41882562 | None:intergenic | 35.0% | |
GATTGTTCACAACTTCAACA+AGG | + | chr2.4:41884018-41884037 | MS.gene067121:CDS | 35.0% | |
GTTGGGTTTATAGTAGGATA+AGG | - | chr2.4:41883637-41883656 | None:intergenic | 35.0% | |
TAAAATCACACCTGAACAGA+GGG | - | chr2.4:41882542-41882561 | None:intergenic | 35.0% | |
TAATATTACGACCGAGATCA+TGG | - | chr2.4:41883180-41883199 | None:intergenic | 35.0% | |
TGATCTCGGTCGTAATATTA+AGG | + | chr2.4:41883180-41883199 | MS.gene067121:intron | 35.0% | |
TGTTGTGTGATAAGGAGTTA+AGG | + | chr2.4:41882654-41882673 | MS.gene067121:intron | 35.0% | |
TTGAAACATGTAAAGCTGCA+GGG | + | chr2.4:41882744-41882763 | MS.gene067121:intron | 35.0% | |
TTGGATTATGCTTGTGGATA+TGG | + | chr2.4:41883991-41884010 | MS.gene067121:CDS | 35.0% | |
TTGTAACACAACTGTGATTG+AGG | + | chr2.4:41883221-41883240 | MS.gene067121:intron | 35.0% | |
TTGTTGGAGTTGTTGTAGTT+GGG | - | chr2.4:41883846-41883865 | None:intergenic | 35.0% | |
! | GACTACTTTAAAGGTAGCTT+TGG | + | chr2.4:41883972-41883991 | MS.gene067121:CDS | 35.0% |
! | GGTTTGAGTATGGATTTGTT+GGG | - | chr2.4:41883726-41883745 | None:intergenic | 35.0% |
!! | ATGGATTTGTTGAACTTGGT+GGG | - | chr2.4:41883807-41883826 | None:intergenic | 35.0% |
!! | GAAGTTGATGAGGCTATATT+AGG | - | chr2.4:41884716-41884735 | None:intergenic | 35.0% |
!! | GAGTATGGATTTGTTGAACT+TGG | - | chr2.4:41883811-41883830 | None:intergenic | 35.0% |
!! | TATGGATTTGTTGAACTTGG+TGG | - | chr2.4:41883808-41883827 | None:intergenic | 35.0% |
AATACACAACTTGTAGGTGC+AGG | - | chr2.4:41884117-41884136 | None:intergenic | 40.0% | |
AGCTGCAGAGACTACTTTAA+AGG | + | chr2.4:41883963-41883982 | MS.gene067121:CDS | 40.0% | |
ATAGGACACATCCATGATCT+CGG | + | chr2.4:41883166-41883185 | MS.gene067121:intron | 40.0% | |
ATGGATTTGTAGAAGCTGGT+GGG | - | chr2.4:41883777-41883796 | None:intergenic | 40.0% | |
CCTACAAGTTGTGTATTTGG+AGG | + | chr2.4:41884120-41884139 | MS.gene067121:CDS | 40.0% | |
CCTCCAAATACACAACTTGT+AGG | - | chr2.4:41884123-41884142 | None:intergenic | 40.0% | |
CGCGGTTAAATTCAGTTGAA+CGG | - | chr2.4:41883247-41883266 | None:intergenic | 40.0% | |
CTTGTTGGAGTTGTTGTAGT+TGG | - | chr2.4:41883847-41883866 | None:intergenic | 40.0% | |
GAGTATGGATTTGTAGAAGC+TGG | - | chr2.4:41883781-41883800 | None:intergenic | 40.0% | |
GCACCTACAAGTTGTGTATT+TGG | + | chr2.4:41884117-41884136 | MS.gene067121:CDS | 40.0% | |
GGAGATGTTGGGTTTATAGT+AGG | - | chr2.4:41883643-41883662 | None:intergenic | 40.0% | |
GGGTTTGAGTATGGATTTGT+TGG | - | chr2.4:41883727-41883746 | None:intergenic | 40.0% | |
GTTGAAACATGTAAAGCTGC+AGG | + | chr2.4:41882743-41882762 | MS.gene067121:intron | 40.0% | |
GTTTGAATAGGGACTTGTAG+AGG | - | chr2.4:41883755-41883774 | None:intergenic | 40.0% | |
GTTTGTCCAGTACTTGTATC+AGG | - | chr2.4:41883673-41883692 | None:intergenic | 40.0% | |
TATGGATTTGTAGAAGCTGG+TGG | - | chr2.4:41883778-41883797 | None:intergenic | 40.0% | |
TCTCATCCTCCAAAACAACA+AGG | + | chr2.4:41884443-41884462 | MS.gene067121:CDS | 40.0% | |
TGTAGTGAGTAGGAACAGAA+TGG | - | chr2.4:41884744-41884763 | None:intergenic | 40.0% | |
TGTTCACAACTTCAACAAGG+AGG | + | chr2.4:41884021-41884040 | MS.gene067121:CDS | 40.0% | |
TTCGATATTATGGCAGATCG+CGG | - | chr2.4:41883265-41883284 | None:intergenic | 40.0% | |
! | TTGTTGTAGTTGGGCTTGTT+GGG | - | chr2.4:41883837-41883856 | None:intergenic | 40.0% |
! | TTTTTCCATTCCGCAGTCAT+AGG | + | chr2.4:41883148-41883167 | MS.gene067121:intron | 40.0% |
!! | GTAGCTTTGGATTATGCTTG+TGG | + | chr2.4:41883985-41884004 | MS.gene067121:CDS | 40.0% |
!!! | TTCTCACCTTGTTGTTTTGG+AGG | - | chr2.4:41884452-41884471 | None:intergenic | 40.0% |
ACTGATGAAGATCCTCCATC+AGG | - | chr2.4:41884668-41884687 | None:intergenic | 45.0% | |
ATGACAATGCCTGATCCTGA+TGG | + | chr2.4:41884650-41884669 | MS.gene067121:CDS | 45.0% | |
ATGGATGTGTCCTATGACTG+CGG | - | chr2.4:41883161-41883180 | None:intergenic | 45.0% | |
ATTGTGAACCCTACAACACC+AGG | + | chr2.4:41883598-41883617 | MS.gene067121:CDS | 45.0% | |
CAACCACCTGATACAAGTAC+TGG | + | chr2.4:41883664-41883683 | MS.gene067121:CDS | 45.0% | |
CATAGAGGCTTGTAGTGAGT+AGG | - | chr2.4:41884754-41884773 | None:intergenic | 45.0% | |
CTAGGTGGAGTCATAGTAGT+TGG | - | chr2.4:41884587-41884606 | None:intergenic | 45.0% | |
CTATGTCTTTCCCTCTGTTC+AGG | + | chr2.4:41882529-41882548 | MS.gene067121:CDS | 45.0% | |
CTTGGTGGAGTCATACTACT+TGG | - | chr2.4:41884629-41884648 | None:intergenic | 45.0% | |
GAATAGGGACTTGTAGAGGT+TGG | - | chr2.4:41883751-41883770 | None:intergenic | 45.0% | |
GATCATTGAACGGTAGTGTC+TGG | + | chr2.4:41884218-41884237 | MS.gene067121:intron | 45.0% | |
GCACATGAAGTGTAGCATAG+AGG | - | chr2.4:41884769-41884788 | None:intergenic | 45.0% | |
GGAGGATCTTCATCAGTCTA+TGG | + | chr2.4:41884671-41884690 | MS.gene067121:CDS | 45.0% | |
GGTCAAACACTGATACGTGT+CGG | - | chr2.4:41884247-41884266 | None:intergenic | 45.0% | |
GTACTTGTATCAGGTGGTTG+AGG | - | chr2.4:41883664-41883683 | None:intergenic | 45.0% | |
GTGGAGTCATACTACTTGGT+GGG | - | chr2.4:41884625-41884644 | None:intergenic | 45.0% | |
GTGGAGTCATAGTAGTTGGT+GGG | - | chr2.4:41884583-41884602 | None:intergenic | 45.0% | |
GTGTTGTGGGAGTCACATTT+GGG | - | chr2.4:41883870-41883889 | None:intergenic | 45.0% | |
GTTGTTGTAGTTGGGCTTGT+TGG | - | chr2.4:41883838-41883857 | None:intergenic | 45.0% | |
TAAGGATTTCCTCCTGTTCC+TGG | - | chr2.4:41883619-41883638 | None:intergenic | 45.0% | |
TGAACTCATGCTGCAATGCA+AGG | - | chr2.4:41884546-41884565 | None:intergenic | 45.0% | |
TGTCCAGTACTTGTATCAGG+TGG | - | chr2.4:41883670-41883689 | None:intergenic | 45.0% | |
! | GGTGTTGTAGGGTTCACAAT+AGG | - | chr2.4:41883598-41883617 | None:intergenic | 45.0% |
! | GTCATAGTAGTTGGACTAGG+TGG | - | chr2.4:41884602-41884621 | None:intergenic | 45.0% |
! | TGGAGTCATACTACTTGGTG+GGG | - | chr2.4:41884624-41884643 | None:intergenic | 45.0% |
!! | AGAAGCTGGTGGGTTTGAAT+AGG | - | chr2.4:41883767-41883786 | None:intergenic | 45.0% |
!! | GAACTTGGTGGGTTTGAGTA+TGG | - | chr2.4:41883796-41883815 | None:intergenic | 45.0% |
!! | GAAGCTGGTGGGTTTGAATA+GGG | - | chr2.4:41883766-41883785 | None:intergenic | 45.0% |
!! | GTTGGTGGGCTTACATATGT+TGG | - | chr2.4:41884569-41884588 | None:intergenic | 45.0% |
!!! | ATTTTATTTTTTAAATTCTT+TGG | + | chr2.4:41882561-41882580 | MS.gene067121:intron | 5.0% |
AACCCTACAACACCAGGAAC+AGG | + | chr2.4:41883604-41883623 | MS.gene067121:CDS | 50.0% | |
AATGTGACTCCCACAACACC+AGG | + | chr2.4:41883871-41883890 | MS.gene067121:CDS | 50.0% | |
ACAATGCCTGATCCTGATGG+AGG | + | chr2.4:41884653-41884672 | MS.gene067121:CDS | 50.0% | |
ACACCAGGAACAGGATCATC+TGG | + | chr2.4:41883886-41883905 | MS.gene067121:CDS | 50.0% | |
ATATTAGGGCTTCCTCCTGG+TGG | - | chr2.4:41884701-41884720 | None:intergenic | 50.0% | |
CAGGTGGTTGAGGAGATGTT+GGG | - | chr2.4:41883654-41883673 | None:intergenic | 50.0% | |
CTTGGTGGGGTCATAGTAGT+TGG | - | chr2.4:41884611-41884630 | None:intergenic | 50.0% | |
GAAGATCCTCCATCAGGATC+AGG | - | chr2.4:41884662-41884681 | None:intergenic | 50.0% | |
GCTATATTAGGGCTTCCTCC+TGG | - | chr2.4:41884704-41884723 | None:intergenic | 50.0% | |
GGAGTCACATTTGGGCTTGT+TGG | - | chr2.4:41883862-41883881 | None:intergenic | 50.0% | |
GGGGTCATAGTAGTTGGACT+AGG | - | chr2.4:41884605-41884624 | None:intergenic | 50.0% | |
GGTGGAGTCATACTACTTGG+TGG | - | chr2.4:41884626-41884645 | None:intergenic | 50.0% | |
GGTGGAGTCATAGTAGTTGG+TGG | - | chr2.4:41884584-41884603 | None:intergenic | 50.0% | |
TAGGGACTTGTAGAGGTTGG+TGG | - | chr2.4:41883748-41883767 | None:intergenic | 50.0% | |
TCAGGTGGTTGAGGAGATGT+TGG | - | chr2.4:41883655-41883674 | None:intergenic | 50.0% | |
TCAGTCTATGGTTCACCACC+AGG | + | chr2.4:41884683-41884702 | MS.gene067121:CDS | 50.0% | |
TGTGTCCTATGACTGCGGAA+TGG | - | chr2.4:41883156-41883175 | None:intergenic | 50.0% | |
! | AGGGACTTGTAGAGGTTGGT+GGG | - | chr2.4:41883747-41883766 | None:intergenic | 50.0% |
! | GGATCAGGCATTGTCATGCT+TGG | - | chr2.4:41884647-41884666 | None:intergenic | 50.0% |
! | GGTGTTGTGGGAGTCACATT+TGG | - | chr2.4:41883871-41883890 | None:intergenic | 50.0% |
! | TCAGGCATTGTCATGCTTGG+TGG | - | chr2.4:41884644-41884663 | None:intergenic | 50.0% |
! | TGATCCTGTTCCTGGTGTTG+TGG | - | chr2.4:41883884-41883903 | None:intergenic | 50.0% |
!! | CTCCTGTTCCTGGTGTTGTA+GGG | - | chr2.4:41883609-41883628 | None:intergenic | 50.0% |
!! | GAGGTTGGTGGGTTTGAGTA+TGG | - | chr2.4:41883736-41883755 | None:intergenic | 50.0% |
!! | GATCCTGTTCCTGGTGTTGT+GGG | - | chr2.4:41883883-41883902 | None:intergenic | 50.0% |
!! | GGGCTTGTTGGGTTTGAGTA+TGG | - | chr2.4:41883826-41883845 | None:intergenic | 50.0% |
ACTCCCACAACACCAGGAAC+AGG | + | chr2.4:41883877-41883896 | MS.gene067121:CDS | 55.0% | |
CCACCAGATGATCCTGTTCC+TGG | - | chr2.4:41883892-41883911 | None:intergenic | 55.0% | |
CCAGGAACAGGATCATCTGG+TGG | + | chr2.4:41883889-41883908 | MS.gene067121:CDS | 55.0% | |
CCTACAACACCAGGAACAGG+AGG | + | chr2.4:41883607-41883626 | MS.gene067121:CDS | 55.0% | |
GGAACAGGATCATCTGGTGG+TGG | + | chr2.4:41883892-41883911 | MS.gene067121:CDS | 55.0% | |
GTCTATGGTTCACCACCAGG+AGG | + | chr2.4:41884686-41884705 | MS.gene067121:CDS | 55.0% | |
!! | ACAGGATCATCTGGTGGTGG+TGG | + | chr2.4:41883895-41883914 | MS.gene067121:CDS | 55.0% |
!! | CCTCCTGTTCCTGGTGTTGT+AGG | - | chr2.4:41883610-41883629 | None:intergenic | 55.0% |
!! | GGCTTGTTGTGCCTGTGTCT+GGG | - | chr2.4:41883705-41883724 | None:intergenic | 55.0% |
GTTGTGCCTGTGTCTGGGCT+TGG | - | chr2.4:41883700-41883719 | None:intergenic | 60.0% | |
! | TGCCTGTGTCTGGGCTTGGT+GGG | - | chr2.4:41883696-41883715 | None:intergenic | 60.0% |
!! | GGATCATCTGGTGGTGGTGG+TGG | + | chr2.4:41883898-41883917 | MS.gene067121:CDS | 60.0% |
!! | GGGCTTGTTGTGCCTGTGTC+TGG | - | chr2.4:41883706-41883725 | None:intergenic | 60.0% |
!! | GTGGTGGTGGTAGTGGTCAG+TGG | + | chr2.4:41883923-41883942 | MS.gene067121:CDS | 60.0% |
!! | TCATCTGGTGGTGGTGGTGG+TGG | + | chr2.4:41883901-41883920 | MS.gene067121:CDS | 60.0% |
ACCCCACCAAGCCCAGACAC+AGG | + | chr2.4:41883691-41883710 | MS.gene067121:CDS | 65.0% | |
GTGCCTGTGTCTGGGCTTGG+TGG | - | chr2.4:41883697-41883716 | None:intergenic | 65.0% | |
!! | GCCTGTGTCTGGGCTTGGTG+GGG | - | chr2.4:41883695-41883714 | None:intergenic | 65.0% |
!! | GGTGGTGGTGGTGGTGGTAG+TGG | + | chr2.4:41883916-41883935 | MS.gene067121:CDS | 65.0% |
!! | TCTGGTGGTGGTGGTGGTGG+TGG | + | chr2.4:41883904-41883923 | MS.gene067121:CDS | 65.0% |
!! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr2.4:41883907-41883926 | MS.gene067121:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 41882493 | 41884802 | 41882493 | ID=MS.gene067121 |
chr2.4 | mRNA | 41882493 | 41884802 | 41882493 | ID=MS.gene067121.t1;Parent=MS.gene067121 |
chr2.4 | exon | 41882493 | 41882550 | 41882493 | ID=MS.gene067121.t1.exon1;Parent=MS.gene067121.t1 |
chr2.4 | CDS | 41882493 | 41882550 | 41882493 | ID=cds.MS.gene067121.t1;Parent=MS.gene067121.t1 |
chr2.4 | exon | 41883524 | 41884171 | 41883524 | ID=MS.gene067121.t1.exon2;Parent=MS.gene067121.t1 |
chr2.4 | CDS | 41883524 | 41884171 | 41883524 | ID=cds.MS.gene067121.t1;Parent=MS.gene067121.t1 |
chr2.4 | exon | 41884425 | 41884464 | 41884425 | ID=MS.gene067121.t1.exon3;Parent=MS.gene067121.t1 |
chr2.4 | CDS | 41884425 | 41884464 | 41884425 | ID=cds.MS.gene067121.t1;Parent=MS.gene067121.t1 |
chr2.4 | exon | 41884556 | 41884802 | 41884556 | ID=MS.gene067121.t1.exon4;Parent=MS.gene067121.t1 |
chr2.4 | CDS | 41884556 | 41884802 | 41884556 | ID=cds.MS.gene067121.t1;Parent=MS.gene067121.t1 |
Gene Sequence |
Protein sequence |