Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067217.t1 | XP_013445316.1 | 97 | 525 | 16 | 0 | 1 | 525 | 1 | 525 | 1.10E-291 | 1011.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067217.t1 | Q9SA38 | 58.1 | 520 | 204 | 7 | 1 | 517 | 1 | 509 | 3.0e-165 | 583.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067217.t1 | A0A072TPM4 | 97.0 | 525 | 16 | 0 | 1 | 525 | 1 | 525 | 7.7e-292 | 1011.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067217 | MS.gene73119 | PPI |
| MS.gene035805 | MS.gene067217 | PPI |
| MS.gene067217 | MS.gene064542 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067217.t1 | MTR_8g447340 | 96.768 | 526 | 17 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1034 |
| MS.gene067217.t1 | MTR_4g030210 | 46.746 | 507 | 253 | 5 | 13 | 519 | 21 | 510 | 4.47e-167 | 483 |
| MS.gene067217.t1 | MTR_4g030040 | 43.786 | 523 | 275 | 7 | 1 | 521 | 3 | 508 | 1.03e-166 | 482 |
| MS.gene067217.t1 | MTR_4g030040 | 44.358 | 514 | 269 | 6 | 9 | 521 | 10 | 507 | 2.80e-166 | 481 |
| MS.gene067217.t1 | MTR_8g039190 | 42.913 | 515 | 276 | 5 | 7 | 518 | 9 | 508 | 1.20e-156 | 457 |
| MS.gene067217.t1 | MTR_5g080050 | 43.561 | 528 | 282 | 5 | 2 | 525 | 3 | 518 | 2.04e-152 | 446 |
| MS.gene067217.t1 | MTR_5g082760 | 42.500 | 520 | 279 | 6 | 11 | 518 | 10 | 521 | 3.07e-146 | 431 |
| MS.gene067217.t1 | MTR_8g039070 | 38.388 | 521 | 270 | 7 | 8 | 525 | 7 | 479 | 2.54e-128 | 383 |
| MS.gene067217.t1 | MTR_2g081930 | 33.270 | 526 | 319 | 9 | 8 | 515 | 12 | 523 | 6.12e-81 | 262 |
| MS.gene067217.t1 | MTR_4g081490 | 32.468 | 385 | 234 | 5 | 151 | 521 | 75 | 447 | 1.22e-54 | 191 |
| MS.gene067217.t1 | MTR_2g081950 | 34.211 | 380 | 225 | 6 | 150 | 510 | 27 | 400 | 2.75e-52 | 183 |
| MS.gene067217.t1 | MTR_4g120720 | 31.229 | 301 | 167 | 7 | 86 | 382 | 2 | 266 | 8.20e-35 | 132 |
| MS.gene067217.t1 | MTR_4g005090 | 26.552 | 467 | 269 | 19 | 107 | 520 | 54 | 499 | 3.59e-18 | 87.8 |
| MS.gene067217.t1 | MTR_4g081480 | 32.847 | 137 | 82 | 3 | 5 | 141 | 18 | 144 | 2.47e-17 | 79.3 |
| MS.gene067217.t1 | MTR_2g081960 | 27.660 | 141 | 88 | 3 | 5 | 145 | 14 | 140 | 1.02e-13 | 68.9 |
| MS.gene067217.t1 | MTR_3g116060 | 32.051 | 156 | 101 | 2 | 139 | 289 | 51 | 206 | 2.18e-13 | 73.2 |
| MS.gene067217.t1 | MTR_1g038600 | 25.641 | 273 | 177 | 10 | 149 | 403 | 85 | 349 | 1.77e-11 | 67.0 |
| MS.gene067217.t1 | MTR_2g020710 | 23.279 | 494 | 296 | 21 | 59 | 507 | 21 | 476 | 3.69e-11 | 65.9 |
| MS.gene067217.t1 | MTR_4g118610 | 22.828 | 495 | 304 | 19 | 57 | 507 | 19 | 479 | 6.48e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067217.t1 | AT1G16390 | 58.077 | 520 | 204 | 8 | 1 | 517 | 1 | 509 | 0.0 | 597 |
| MS.gene067217.t1 | AT1G79360 | 53.558 | 534 | 219 | 8 | 1 | 521 | 1 | 518 | 0.0 | 578 |
| MS.gene067217.t1 | AT1G16370 | 40.797 | 527 | 290 | 9 | 1 | 519 | 1 | 513 | 5.15e-139 | 412 |
| MS.gene067217.t1 | AT1G79410 | 41.811 | 519 | 279 | 9 | 6 | 519 | 7 | 507 | 8.79e-134 | 398 |
| MS.gene067217.t1 | AT1G73220 | 36.138 | 523 | 306 | 9 | 14 | 525 | 31 | 536 | 1.79e-107 | 331 |
| MS.gene067217.t1 | AT3G20660 | 31.548 | 504 | 309 | 9 | 32 | 519 | 38 | 521 | 6.02e-76 | 249 |
| MS.gene067217.t1 | AT3G51490 | 29.534 | 193 | 126 | 4 | 104 | 289 | 19 | 208 | 3.04e-14 | 76.3 |
| MS.gene067217.t1 | AT3G51490 | 29.534 | 193 | 126 | 4 | 104 | 289 | 19 | 208 | 3.56e-14 | 75.9 |
| MS.gene067217.t1 | AT3G51490 | 30.769 | 156 | 103 | 2 | 139 | 289 | 3 | 158 | 6.09e-14 | 75.1 |
| MS.gene067217.t1 | AT1G20840 | 28.205 | 156 | 107 | 2 | 139 | 289 | 51 | 206 | 2.54e-12 | 70.1 |
| MS.gene067217.t1 | AT1G20840 | 28.205 | 156 | 107 | 2 | 139 | 289 | 51 | 206 | 2.54e-12 | 70.1 |
| MS.gene067217.t1 | AT3G13050 | 23.028 | 469 | 290 | 16 | 107 | 521 | 48 | 499 | 1.40e-11 | 67.4 |
| MS.gene067217.t1 | AT3G13050 | 23.028 | 469 | 290 | 16 | 107 | 521 | 48 | 499 | 1.40e-11 | 67.4 |
| MS.gene067217.t1 | AT3G13050 | 23.028 | 469 | 290 | 16 | 107 | 521 | 48 | 499 | 1.40e-11 | 67.4 |
| MS.gene067217.t1 | AT3G13050 | 23.028 | 469 | 290 | 16 | 107 | 521 | 48 | 499 | 1.40e-11 | 67.4 |
| MS.gene067217.t1 | AT4G04750 | 22.857 | 455 | 280 | 18 | 104 | 516 | 99 | 524 | 1.56e-11 | 67.0 |
| MS.gene067217.t1 | AT4G04760 | 24.270 | 445 | 262 | 21 | 104 | 507 | 50 | 460 | 1.59e-11 | 67.0 |
| MS.gene067217.t1 | AT4G04750 | 22.857 | 455 | 280 | 18 | 104 | 516 | 55 | 480 | 2.11e-11 | 66.6 |
| MS.gene067217.t1 | AT4G04750 | 22.857 | 455 | 280 | 18 | 104 | 516 | 55 | 480 | 2.11e-11 | 66.6 |
| MS.gene067217.t1 | AT2G43330 | 24.934 | 381 | 245 | 14 | 155 | 504 | 99 | 469 | 4.75e-11 | 65.5 |
| MS.gene067217.t1 | AT4G04760 | 23.918 | 439 | 268 | 19 | 104 | 507 | 50 | 457 | 5.32e-11 | 65.5 |
| MS.gene067217.t1 | AT4G04760 | 24.641 | 418 | 243 | 20 | 131 | 507 | 15 | 401 | 9.05e-11 | 64.3 |
Find 118 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGTTGATGGATAAATTT+AGG | 0.186538 | 8.1:-58659858 | None:intergenic |
| GGAATTGGAGTTGTCTATTA+TGG | 0.204957 | 8.1:+58659997 | MS.gene067217:CDS |
| AGAGAATGAAGGTGTTTATT+TGG | 0.221297 | 8.1:-58659031 | None:intergenic |
| GGAAATAAGTTTCTTTGTTA+TGG | 0.222142 | 8.1:+58660396 | MS.gene067217:CDS |
| AAGGAGACTATTGTTGATTA+TGG | 0.235701 | 8.1:+58659963 | MS.gene067217:CDS |
| TCCAGCTTCCATGTTCTTCA+TGG | 0.236434 | 8.1:+58659357 | MS.gene067217:CDS |
| TTGATTATGGCATTAGGTTT+TGG | 0.258022 | 8.1:+58659976 | MS.gene067217:CDS |
| TCTTCATAGACAAGTTTAAA+AGG | 0.269222 | 8.1:+58660115 | MS.gene067217:CDS |
| TCATTGCTTAAATTCTTATC+TGG | 0.270363 | 8.1:+58659520 | MS.gene067217:CDS |
| TAAAATTTCTTGTGACATAT+TGG | 0.273163 | 8.1:+58660524 | MS.gene067217:CDS |
| CCACTTTCTCTCCCAACATT+TGG | 0.297693 | 8.1:+58659491 | MS.gene067217:CDS |
| GACACTTAGGTAAAGATTAA+AGG | 0.306332 | 8.1:-58660046 | None:intergenic |
| ATCCCAAGCCCATGAGCCTT+TGG | 0.311526 | 8.1:-58659266 | None:intergenic |
| CTATGGCGCAAGATGCAAAT+AGG | 0.314696 | 8.1:+58660207 | MS.gene067217:CDS |
| CTTAAATTCTTATCTGGATT+CGG | 0.317876 | 8.1:+58659526 | MS.gene067217:CDS |
| TTCCCAAAGGCTCATGGGCT+TGG | 0.319586 | 8.1:+58659263 | MS.gene067217:CDS |
| GAAATAAGTTTCTTTGTTAT+GGG | 0.319760 | 8.1:+58660397 | MS.gene067217:CDS |
| TTCTTCATGGGTTGCTTAGT+TGG | 0.334221 | 8.1:+58659370 | MS.gene067217:CDS |
| TTTGTGTCACTAGTGTTATT+GGG | 0.359751 | 8.1:-58659001 | None:intergenic |
| GCTAGGCTTGCTGTGGTGTT+TGG | 0.363493 | 8.1:+58660336 | MS.gene067217:CDS |
| AATAAACACCTTCATTCTCT+TGG | 0.365332 | 8.1:+58659034 | MS.gene067217:CDS |
| AAAGGCTCATGGGCTTGGGA+TGG | 0.382132 | 8.1:+58659268 | MS.gene067217:CDS |
| CTATTGTTGATTATGGCATT+AGG | 0.382177 | 8.1:+58659970 | MS.gene067217:CDS |
| CCACTATTGAAGGGGAACTA+TGG | 0.385421 | 8.1:+58660190 | MS.gene067217:CDS |
| CCAGCTTCCATGTTCTTCAT+GGG | 0.388190 | 8.1:+58659358 | MS.gene067217:CDS |
| TCCCAAAGGCTCATGGGCTT+GGG | 0.389985 | 8.1:+58659264 | MS.gene067217:CDS |
| TTTCTTGTCCCTTCCTGCTA+TGG | 0.406080 | 8.1:+58659654 | MS.gene067217:CDS |
| AATGCATAGGTGAACTCAAT+TGG | 0.408457 | 8.1:+58659071 | MS.gene067217:CDS |
| AGCATGCAATAGAAAATTGT+TGG | 0.409272 | 8.1:-58659730 | None:intergenic |
| GAGGAATTCAGCTTTGTCTA+TGG | 0.414020 | 8.1:+58660314 | MS.gene067217:CDS |
| TATGGTATGCCACTAGGTCT+TGG | 0.417877 | 8.1:+58660015 | MS.gene067217:CDS |
| TCCCAAGCCCATGAGCCTTT+GGG | 0.421056 | 8.1:-58659265 | None:intergenic |
| GGCTTGGGATGGGCCAGCAC+AGG | 0.424738 | 8.1:+58659279 | MS.gene067217:CDS |
| CCTCTCAATAGAAGCCATCT+AGG | 0.428587 | 8.1:-58659778 | None:intergenic |
| CGAGGTAAGATTAGTGTCAT+TGG | 0.430581 | 8.1:+58659610 | MS.gene067217:CDS |
| TCGTTCAAGAGTCACCTAGA+TGG | 0.439288 | 8.1:+58659764 | MS.gene067217:CDS |
| CCATAGTTCCCCTTCAATAG+TGG | 0.440279 | 8.1:-58660190 | None:intergenic |
| AGGCTTGCTGTGGTGTTTGG+TGG | 0.445248 | 8.1:+58660339 | MS.gene067217:CDS |
| AAGGCTCATGGGCTTGGGAT+GGG | 0.445356 | 8.1:+58659269 | MS.gene067217:CDS |
| TGAAGATGGTATCTCACTTA+AGG | 0.447007 | 8.1:-58660079 | None:intergenic |
| CTGTTCTAATATCCTTTGCT+TGG | 0.447398 | 8.1:+58659110 | MS.gene067217:CDS |
| AGTCCATTGTTGGTGGGTGC+TGG | 0.448528 | 8.1:+58660369 | MS.gene067217:CDS |
| AAGTGAGATACCATCTTCAT+TGG | 0.448817 | 8.1:+58660083 | MS.gene067217:CDS |
| GTGTGAAGACATATTGTTGA+TGG | 0.453799 | 8.1:-58659869 | None:intergenic |
| TTCATGGGTTGCTTAGTTGG+TGG | 0.455562 | 8.1:+58659373 | MS.gene067217:CDS |
| CTGCAAGTGTGGACAAGAAA+AGG | 0.456692 | 8.1:-58659396 | None:intergenic |
| GTGTTCTTACCTGAGACAAA+AGG | 0.458209 | 8.1:+58660459 | MS.gene067217:CDS |
| CTTGCAGACTCTTCATCACT+TGG | 0.478004 | 8.1:+58659412 | MS.gene067217:CDS |
| AGTATAATGTCCACTATTGA+AGG | 0.485637 | 8.1:+58660180 | MS.gene067217:CDS |
| TATGGCGCAAGATGCAAATA+GGG | 0.486468 | 8.1:+58660208 | MS.gene067217:CDS |
| TGTCACTAGTGTTATTGGGT+TGG | 0.486594 | 8.1:-58658997 | None:intergenic |
| GGCCTCCATCATATCTGAAT+GGG | 0.487271 | 8.1:+58659300 | MS.gene067217:CDS |
| GTTCTAGCTTCCGAGCTCGT+TGG | 0.488407 | 8.1:+58659577 | MS.gene067217:CDS |
| AGGCATTAAAAGTGACACTT+AGG | 0.490833 | 8.1:-58660059 | None:intergenic |
| CAATGAGTAGATCCAAATGT+TGG | 0.492354 | 8.1:-58659503 | None:intergenic |
| TCACCGATGCACTTCCATCA+TGG | 0.492497 | 8.1:+58659167 | MS.gene067217:CDS |
| AAACAGTGATGAATGTTTGT+TGG | 0.492661 | 8.1:-58659144 | None:intergenic |
| TTCATCCATTGTATCACAAA+GGG | 0.496099 | 8.1:-58660487 | None:intergenic |
| AGGCCTCCATCATATCTGAA+TGG | 0.501290 | 8.1:+58659299 | MS.gene067217:CDS |
| AACAGTGATGAATGTTTGTT+GGG | 0.502527 | 8.1:-58659143 | None:intergenic |
| GATATGATGGAGGCCTGTGC+TGG | 0.503862 | 8.1:-58659292 | None:intergenic |
| CATGGCCCATTCAGATATGA+TGG | 0.504532 | 8.1:-58659305 | None:intergenic |
| GGTTGGCTCAGAAGAGGAGT+TGG | 0.504676 | 8.1:-58658980 | None:intergenic |
| AATGAGTAGATCCAAATGTT+GGG | 0.509719 | 8.1:-58659502 | None:intergenic |
| GAATTGATGTCCACAAGTAA+AGG | 0.510968 | 8.1:-58659708 | None:intergenic |
| CCCATGAAGAACATGGAAGC+TGG | 0.512327 | 8.1:-58659358 | None:intergenic |
| CCAAATGTTGGGAGAGAAAG+TGG | 0.516124 | 8.1:-58659491 | None:intergenic |
| GCAAGTTTCCCAAAGGCTCA+TGG | 0.516859 | 8.1:+58659257 | MS.gene067217:CDS |
| GGATTCGGCCGCGCTACCAT+CGG | 0.518567 | 8.1:+58659541 | MS.gene067217:CDS |
| GCTGAATTCCTCACACAAGT+TGG | 0.519274 | 8.1:-58660303 | None:intergenic |
| TCACCGGTGCAGTGCCATGA+TGG | 0.520447 | 8.1:-58659181 | None:intergenic |
| TTGTTTGCATAAGCCATAGC+AGG | 0.520590 | 8.1:-58659667 | None:intergenic |
| ATTCAGCTTTGTCTATGGCT+AGG | 0.521256 | 8.1:+58660319 | MS.gene067217:CDS |
| CAAGTTTCCCAAAGGCTCAT+GGG | 0.531113 | 8.1:+58659258 | MS.gene067217:CDS |
| CAAAGGATATTAGAACAGCT+TGG | 0.537430 | 8.1:-58659105 | None:intergenic |
| TTGTTGGTGGGTGCTGGTAG+AGG | 0.538136 | 8.1:+58660375 | MS.gene067217:CDS |
| TGTTCTTACCTGAGACAAAA+GGG | 0.538318 | 8.1:+58660460 | MS.gene067217:CDS |
| CCATCGCTTTCCAACGAGCT+CGG | 0.545161 | 8.1:-58659587 | None:intergenic |
| CTTCCATCATGGCACTGCAC+CGG | 0.552872 | 8.1:+58659178 | MS.gene067217:CDS |
| AGAGAAAGTGGTGAAGAATG+AGG | 0.554837 | 8.1:-58659479 | None:intergenic |
| GTCTATGGCTAGGCTTGCTG+TGG | 0.557750 | 8.1:+58660329 | MS.gene067217:CDS |
| ATGCAAACAAAACTTCCTCA+TGG | 0.558952 | 8.1:+58659680 | MS.gene067217:CDS |
| TGCATAAGCCATAGCAGGAA+GGG | 0.561241 | 8.1:-58659662 | None:intergenic |
| GGAAGAAAATAATATGAATG+TGG | 0.561848 | 8.1:+58659894 | MS.gene067217:CDS |
| CTACCAGCACCCACCAACAA+TGG | 0.564182 | 8.1:-58660372 | None:intergenic |
| CTTCATCCATTGTATCACAA+AGG | 0.568181 | 8.1:-58660488 | None:intergenic |
| AAATAAGTTTCTTTGTTATG+GGG | 0.570429 | 8.1:+58660398 | MS.gene067217:CDS |
| TGCAAAAGAAATGGTCCTCA+AGG | 0.573559 | 8.1:+58659944 | MS.gene067217:CDS |
| GTCTATTATGGTATGCCACT+AGG | 0.573826 | 8.1:+58660009 | MS.gene067217:CDS |
| CCGAGCTCGTTGGAAAGCGA+TGG | 0.585244 | 8.1:+58659587 | MS.gene067217:CDS |
| TGTGAGCGCTCTATCATCAC+AGG | 0.586373 | 8.1:+58659331 | MS.gene067217:CDS |
| CTCGTTGGAAAGCGATGGCG+AGG | 0.587564 | 8.1:+58659592 | MS.gene067217:CDS |
| TTGTGAATCCAAGAGAATGA+AGG | 0.590312 | 8.1:-58659042 | None:intergenic |
| GAATGAAGGTGTTTATTTGG+TGG | 0.593017 | 8.1:-58659028 | None:intergenic |
| CATGGAGAAACCTTTACTTG+TGG | 0.594971 | 8.1:+58659698 | MS.gene067217:CDS |
| GATAGAGCGCTCACACTGCA+TGG | 0.603997 | 8.1:-58659323 | None:intergenic |
| TTGCATAAGCCATAGCAGGA+AGG | 0.604966 | 8.1:-58659663 | None:intergenic |
| GTATAATGTCCACTATTGAA+GGG | 0.609508 | 8.1:+58660181 | MS.gene067217:CDS |
| AACGAGGGATGAAGTGCCGA+TGG | 0.610016 | 8.1:-58659557 | None:intergenic |
| TTATTGGGTTGGCTCAGAAG+AGG | 0.610379 | 8.1:-58658986 | None:intergenic |
| GAGCTCGGAAGCTAGAACGA+GGG | 0.613872 | 8.1:-58659572 | None:intergenic |
| TGATGAAGAGTCTGCAAGTG+TGG | 0.615473 | 8.1:-58659407 | None:intergenic |
| TGAAGAACATGGAAGCTGGA+AGG | 0.616002 | 8.1:-58659354 | None:intergenic |
| TAAGCAACCCATGAAGAACA+TGG | 0.617434 | 8.1:-58659365 | None:intergenic |
| CCTAGATGGCTTCTATTGAG+AGG | 0.619227 | 8.1:+58659778 | MS.gene067217:CDS |
| CAAGTAAAGGTTTCTCCATG+AGG | 0.621774 | 8.1:-58659695 | None:intergenic |
| GGCGTCAAAGATCCAAGCAA+AGG | 0.624319 | 8.1:-58659122 | None:intergenic |
| TATAATGTCCACTATTGAAG+GGG | 0.638910 | 8.1:+58660182 | MS.gene067217:CDS |
| ATGAAGTGCCGATGGTAGCG+CGG | 0.645829 | 8.1:-58659549 | None:intergenic |
| CAACAATATGTCTTCACACG+AGG | 0.646093 | 8.1:+58659873 | MS.gene067217:CDS |
| GAGTGCCCTTTGTGATACAA+TGG | 0.652906 | 8.1:+58660482 | MS.gene067217:CDS |
| AATCAACAATAGTCTCCTTG+AGG | 0.659489 | 8.1:-58659959 | None:intergenic |
| AATTGTTTCCAACTTGTGTG+AGG | 0.667556 | 8.1:+58660295 | MS.gene067217:CDS |
| CGAGCTCGGAAGCTAGAACG+AGG | 0.668802 | 8.1:-58659573 | None:intergenic |
| GTGCCATGATGGAAGTGCAT+CGG | 0.671550 | 8.1:-58659170 | None:intergenic |
| GATGTGTGCAAGTTTCCCAA+AGG | 0.681202 | 8.1:+58659250 | MS.gene067217:CDS |
| GACAAGTTTCCAAGACCTAG+TGG | 0.688488 | 8.1:-58660024 | None:intergenic |
| GGCCCATTCAGATATGATGG+AGG | 0.693551 | 8.1:-58659302 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTTCTTGTGACATAT+TGG | + | chr8.1:58660524-58660543 | MS.gene067217:CDS | 20.0% |
| !!! | AAATAAGTTTCTTTGTTATG+GGG | + | chr8.1:58660398-58660417 | MS.gene067217:CDS | 20.0% |
| !!! | GAAATAAGTTTCTTTGTTAT+GGG | + | chr8.1:58660397-58660416 | MS.gene067217:CDS | 20.0% |
| !!! | TATTGTTGATGGATAAATTT+AGG | - | chr8.1:58659861-58659880 | None:intergenic | 20.0% |
| ! | CTTAAATTCTTATCTGGATT+CGG | + | chr8.1:58659526-58659545 | MS.gene067217:CDS | 25.0% |
| ! | GGAAATAAGTTTCTTTGTTA+TGG | + | chr8.1:58660396-58660415 | MS.gene067217:CDS | 25.0% |
| ! | GGAAGAAAATAATATGAATG+TGG | + | chr8.1:58659894-58659913 | MS.gene067217:CDS | 25.0% |
| ! | TCATTGCTTAAATTCTTATC+TGG | + | chr8.1:58659520-58659539 | MS.gene067217:CDS | 25.0% |
| ! | TCTTCATAGACAAGTTTAAA+AGG | + | chr8.1:58660115-58660134 | MS.gene067217:CDS | 25.0% |
| ! | TTCACAATAGAAAAATGCAT+AGG | + | chr8.1:58659058-58659077 | MS.gene067217:CDS | 25.0% |
| !! | AACTTTTGTTGCAAAAGAAA+TGG | + | chr8.1:58659935-58659954 | MS.gene067217:CDS | 25.0% |
| !! | GAAAACATTGACATTTTGAA+TGG | + | chr8.1:58659202-58659221 | MS.gene067217:CDS | 25.0% |
| !! | TTTGTGTTTTGTATCATAAG+TGG | + | chr8.1:58660150-58660169 | MS.gene067217:CDS | 25.0% |
| !!! | ATTAGTTTTAGTGGAGTATT+TGG | + | chr8.1:58660435-58660454 | MS.gene067217:CDS | 25.0% |
| AAAAATGTGACCAATGAAGA+TGG | - | chr8.1:58660096-58660115 | None:intergenic | 30.0% | |
| AAACAGTGATGAATGTTTGT+TGG | - | chr8.1:58659147-58659166 | None:intergenic | 30.0% | |
| AACAGTGATGAATGTTTGTT+GGG | - | chr8.1:58659146-58659165 | None:intergenic | 30.0% | |
| AATAAACACCTTCATTCTCT+TGG | + | chr8.1:58659034-58659053 | MS.gene067217:CDS | 30.0% | |
| AATGAGTAGATCCAAATGTT+GGG | - | chr8.1:58659505-58659524 | None:intergenic | 30.0% | |
| AGCATGCAATAGAAAATTGT+TGG | - | chr8.1:58659733-58659752 | None:intergenic | 30.0% | |
| AGTATAATGTCCACTATTGA+AGG | + | chr8.1:58660180-58660199 | MS.gene067217:CDS | 30.0% | |
| GACACTTAGGTAAAGATTAA+AGG | - | chr8.1:58660049-58660068 | None:intergenic | 30.0% | |
| GTATAATGTCCACTATTGAA+GGG | + | chr8.1:58660181-58660200 | MS.gene067217:CDS | 30.0% | |
| TATAATGTCCACTATTGAAG+GGG | + | chr8.1:58660182-58660201 | MS.gene067217:CDS | 30.0% | |
| TTCATCCATTGTATCACAAA+GGG | - | chr8.1:58660490-58660509 | None:intergenic | 30.0% | |
| ! | AACAATTTTCTATTGCATGC+TGG | + | chr8.1:58659732-58659751 | MS.gene067217:CDS | 30.0% |
| ! | AAGGAGACTATTGTTGATTA+TGG | + | chr8.1:58659963-58659982 | MS.gene067217:CDS | 30.0% |
| ! | CAAAATGTCAATGTTTTCAC+CGG | - | chr8.1:58659200-58659219 | None:intergenic | 30.0% |
| ! | CTATTGTTGATTATGGCATT+AGG | + | chr8.1:58659970-58659989 | MS.gene067217:CDS | 30.0% |
| ! | CTTTTGCAACAAAAGTTTGA+GGG | - | chr8.1:58659932-58659951 | None:intergenic | 30.0% |
| ! | TCTTTTGCAACAAAAGTTTG+AGG | - | chr8.1:58659933-58659952 | None:intergenic | 30.0% |
| ! | TTGATTATGGCATTAGGTTT+TGG | + | chr8.1:58659976-58659995 | MS.gene067217:CDS | 30.0% |
| ! | TTTGTGTCACTAGTGTTATT+GGG | - | chr8.1:58659004-58659023 | None:intergenic | 30.0% |
| !! | AGAGAATGAAGGTGTTTATT+TGG | - | chr8.1:58659034-58659053 | None:intergenic | 30.0% |
| !! | TTCTTTGTTATGGGGTTTTT+GGG | + | chr8.1:58660406-58660425 | MS.gene067217:CDS | 30.0% |
| !! | TTTCTTTGTTATGGGGTTTT+TGG | + | chr8.1:58660405-58660424 | MS.gene067217:CDS | 30.0% |
| !! | TTTTGTGTCACTAGTGTTAT+TGG | - | chr8.1:58659005-58659024 | None:intergenic | 30.0% |
| AAGTGAGATACCATCTTCAT+TGG | + | chr8.1:58660083-58660102 | MS.gene067217:CDS | 35.0% | |
| AATCAACAATAGTCTCCTTG+AGG | - | chr8.1:58659962-58659981 | None:intergenic | 35.0% | |
| AATGCATAGGTGAACTCAAT+TGG | + | chr8.1:58659071-58659090 | MS.gene067217:CDS | 35.0% | |
| AATTGTTTCCAACTTGTGTG+AGG | + | chr8.1:58660295-58660314 | MS.gene067217:CDS | 35.0% | |
| AGGCATTAAAAGTGACACTT+AGG | - | chr8.1:58660062-58660081 | None:intergenic | 35.0% | |
| ATGCAAACAAAACTTCCTCA+TGG | + | chr8.1:58659680-58659699 | MS.gene067217:CDS | 35.0% | |
| CAAAGGATATTAGAACAGCT+TGG | - | chr8.1:58659108-58659127 | None:intergenic | 35.0% | |
| CAATGAGTAGATCCAAATGT+TGG | - | chr8.1:58659506-58659525 | None:intergenic | 35.0% | |
| CTGTTCTAATATCCTTTGCT+TGG | + | chr8.1:58659110-58659129 | MS.gene067217:CDS | 35.0% | |
| CTTCATCCATTGTATCACAA+AGG | - | chr8.1:58660491-58660510 | None:intergenic | 35.0% | |
| GAATTGATGTCCACAAGTAA+AGG | - | chr8.1:58659711-58659730 | None:intergenic | 35.0% | |
| GGAATTGGAGTTGTCTATTA+TGG | + | chr8.1:58659997-58660016 | MS.gene067217:CDS | 35.0% | |
| GTGTGAAGACATATTGTTGA+TGG | - | chr8.1:58659872-58659891 | None:intergenic | 35.0% | |
| TGAAGATGGTATCTCACTTA+AGG | - | chr8.1:58660082-58660101 | None:intergenic | 35.0% | |
| TGTTCTTACCTGAGACAAAA+GGG | + | chr8.1:58660460-58660479 | MS.gene067217:CDS | 35.0% | |
| TTGTGAATCCAAGAGAATGA+AGG | - | chr8.1:58659045-58659064 | None:intergenic | 35.0% | |
| ! | CTTCTTCTCAACTCTTTTGA+TGG | + | chr8.1:58659450-58659469 | MS.gene067217:CDS | 35.0% |
| !! | GAATGAAGGTGTTTATTTGG+TGG | - | chr8.1:58659031-58659050 | None:intergenic | 35.0% |
| !! | GGCTTCTTTTGTTTCACTAT+AGG | + | chr8.1:58659631-58659650 | MS.gene067217:CDS | 35.0% |
| !!! | ATGGCATTAGGTTTTGGAAT+TGG | + | chr8.1:58659982-58660001 | MS.gene067217:CDS | 35.0% |
| AGAGAAAGTGGTGAAGAATG+AGG | - | chr8.1:58659482-58659501 | None:intergenic | 40.0% | |
| CAACAATATGTCTTCACACG+AGG | + | chr8.1:58659873-58659892 | MS.gene067217:CDS | 40.0% | |
| CAAGTAAAGGTTTCTCCATG+AGG | - | chr8.1:58659698-58659717 | None:intergenic | 40.0% | |
| CATGGAGAAACCTTTACTTG+TGG | + | chr8.1:58659698-58659717 | MS.gene067217:CDS | 40.0% | |
| CGAGGTAAGATTAGTGTCAT+TGG | + | chr8.1:58659610-58659629 | MS.gene067217:CDS | 40.0% | |
| GTCTATTATGGTATGCCACT+AGG | + | chr8.1:58660009-58660028 | MS.gene067217:CDS | 40.0% | |
| GTGTTCTTACCTGAGACAAA+AGG | + | chr8.1:58660459-58660478 | MS.gene067217:CDS | 40.0% | |
| TAAGCAACCCATGAAGAACA+TGG | - | chr8.1:58659368-58659387 | None:intergenic | 40.0% | |
| TATGGCGCAAGATGCAAATA+GGG | + | chr8.1:58660208-58660227 | MS.gene067217:CDS | 40.0% | |
| TGCAAAAGAAATGGTCCTCA+AGG | + | chr8.1:58659944-58659963 | MS.gene067217:CDS | 40.0% | |
| TTGTTTGCATAAGCCATAGC+AGG | - | chr8.1:58659670-58659689 | None:intergenic | 40.0% | |
| ! | AGCTTTTAGTCCATTGTTGG+TGG | + | chr8.1:58660362-58660381 | MS.gene067217:CDS | 40.0% |
| ! | ATTCAGCTTTGTCTATGGCT+AGG | + | chr8.1:58660319-58660338 | MS.gene067217:CDS | 40.0% |
| ! | GAGGAATTCAGCTTTGTCTA+TGG | + | chr8.1:58660314-58660333 | MS.gene067217:CDS | 40.0% |
| ! | GCTTTTAGTCCATTGTTGGT+GGG | + | chr8.1:58660363-58660382 | MS.gene067217:CDS | 40.0% |
| ! | TGGAGCTTTTAGTCCATTGT+TGG | + | chr8.1:58660359-58660378 | MS.gene067217:CDS | 40.0% |
| ! | TGTCACTAGTGTTATTGGGT+TGG | - | chr8.1:58659000-58659019 | None:intergenic | 40.0% |
| ! | TTCTTCATGGGTTGCTTAGT+TGG | + | chr8.1:58659370-58659389 | MS.gene067217:CDS | 40.0% |
| !!! | GGGTTGGCTATTAGTTTTAG+TGG | + | chr8.1:58660426-58660445 | MS.gene067217:CDS | 40.0% |
| !!! | TTGTTATGGGGTTTTTGGGT+TGG | + | chr8.1:58660410-58660429 | MS.gene067217:CDS | 40.0% |
| AGGCCTCCATCATATCTGAA+TGG | + | chr8.1:58659299-58659318 | MS.gene067217:CDS | 45.0% | |
| CAAGTTTCCCAAAGGCTCAT+GGG | + | chr8.1:58659258-58659277 | MS.gene067217:CDS | 45.0% | |
| CATGGCCCATTCAGATATGA+TGG | - | chr8.1:58659308-58659327 | None:intergenic | 45.0% | |
| CCAAATGTTGGGAGAGAAAG+TGG | - | chr8.1:58659494-58659513 | None:intergenic | 45.0% | |
| CCACTATTGAAGGGGAACTA+TGG | + | chr8.1:58660190-58660209 | MS.gene067217:CDS | 45.0% | |
| CCACTTTCTCTCCCAACATT+TGG | + | chr8.1:58659491-58659510 | MS.gene067217:CDS | 45.0% | |
| CCAGCTTCCATGTTCTTCAT+GGG | + | chr8.1:58659358-58659377 | MS.gene067217:CDS | 45.0% | |
| CCATAGTTCCCCTTCAATAG+TGG | - | chr8.1:58660193-58660212 | None:intergenic | 45.0% | |
| CCTAGATGGCTTCTATTGAG+AGG | + | chr8.1:58659778-58659797 | MS.gene067217:CDS | 45.0% | |
| CCTCTCAATAGAAGCCATCT+AGG | - | chr8.1:58659781-58659800 | None:intergenic | 45.0% | |
| CTATGGCGCAAGATGCAAAT+AGG | + | chr8.1:58660207-58660226 | MS.gene067217:CDS | 45.0% | |
| CTGCAAGTGTGGACAAGAAA+AGG | - | chr8.1:58659399-58659418 | None:intergenic | 45.0% | |
| CTTGCAGACTCTTCATCACT+TGG | + | chr8.1:58659412-58659431 | MS.gene067217:CDS | 45.0% | |
| GACAAGTTTCCAAGACCTAG+TGG | - | chr8.1:58660027-58660046 | None:intergenic | 45.0% | |
| GAGTGCCCTTTGTGATACAA+TGG | + | chr8.1:58660482-58660501 | MS.gene067217:CDS | 45.0% | |
| GATGTGTGCAAGTTTCCCAA+AGG | + | chr8.1:58659250-58659269 | MS.gene067217:CDS | 45.0% | |
| GCTGAATTCCTCACACAAGT+TGG | - | chr8.1:58660306-58660325 | None:intergenic | 45.0% | |
| GGCCTCCATCATATCTGAAT+GGG | + | chr8.1:58659300-58659319 | MS.gene067217:CDS | 45.0% | |
| TATGGTATGCCACTAGGTCT+TGG | + | chr8.1:58660015-58660034 | MS.gene067217:CDS | 45.0% | |
| TCCAGCTTCCATGTTCTTCA+TGG | + | chr8.1:58659357-58659376 | MS.gene067217:CDS | 45.0% | |
| TCGTTCAAGAGTCACCTAGA+TGG | + | chr8.1:58659764-58659783 | MS.gene067217:CDS | 45.0% | |
| TGAAGAACATGGAAGCTGGA+AGG | - | chr8.1:58659357-58659376 | None:intergenic | 45.0% | |
| TGATGAAGAGTCTGCAAGTG+TGG | - | chr8.1:58659410-58659429 | None:intergenic | 45.0% | |
| TGCATAAGCCATAGCAGGAA+GGG | - | chr8.1:58659665-58659684 | None:intergenic | 45.0% | |
| TTGCATAAGCCATAGCAGGA+AGG | - | chr8.1:58659666-58659685 | None:intergenic | 45.0% | |
| TTTCTTGTCCCTTCCTGCTA+TGG | + | chr8.1:58659654-58659673 | MS.gene067217:CDS | 45.0% | |
| ! | TTCATGGGTTGCTTAGTTGG+TGG | + | chr8.1:58659373-58659392 | MS.gene067217:CDS | 45.0% |
| !! | TTATTGGGTTGGCTCAGAAG+AGG | - | chr8.1:58658989-58659008 | None:intergenic | 45.0% |
| CCCATGAAGAACATGGAAGC+TGG | - | chr8.1:58659361-58659380 | None:intergenic | 50.0% | |
| GCAAGTTTCCCAAAGGCTCA+TGG | + | chr8.1:58659257-58659276 | MS.gene067217:CDS | 50.0% | |
| GGCCCATTCAGATATGATGG+AGG | - | chr8.1:58659305-58659324 | None:intergenic | 50.0% | |
| GGCGTCAAAGATCCAAGCAA+AGG | - | chr8.1:58659125-58659144 | None:intergenic | 50.0% | |
| TCACCGATGCACTTCCATCA+TGG | + | chr8.1:58659167-58659186 | MS.gene067217:CDS | 50.0% | |
| TGTGAGCGCTCTATCATCAC+AGG | + | chr8.1:58659331-58659350 | MS.gene067217:CDS | 50.0% | |
| ! | GTGCCATGATGGAAGTGCAT+CGG | - | chr8.1:58659173-58659192 | None:intergenic | 50.0% |
| AAAGGCTCATGGGCTTGGGA+TGG | + | chr8.1:58659268-58659287 | MS.gene067217:CDS | 55.0% | |
| AAGGCTCATGGGCTTGGGAT+GGG | + | chr8.1:58659269-58659288 | MS.gene067217:CDS | 55.0% | |
| ATCCCAAGCCCATGAGCCTT+TGG | - | chr8.1:58659269-58659288 | None:intergenic | 55.0% | |
| CCATCGCTTTCCAACGAGCT+CGG | - | chr8.1:58659590-58659609 | None:intergenic | 55.0% | |
| CTACCAGCACCCACCAACAA+TGG | - | chr8.1:58660375-58660394 | None:intergenic | 55.0% | |
| CTTCCATCATGGCACTGCAC+CGG | + | chr8.1:58659178-58659197 | MS.gene067217:CDS | 55.0% | |
| GAGCTCGGAAGCTAGAACGA+GGG | - | chr8.1:58659575-58659594 | None:intergenic | 55.0% | |
| TCCCAAAGGCTCATGGGCTT+GGG | + | chr8.1:58659264-58659283 | MS.gene067217:CDS | 55.0% | |
| TCCCAAGCCCATGAGCCTTT+GGG | - | chr8.1:58659268-58659287 | None:intergenic | 55.0% | |
| TTCCCAAAGGCTCATGGGCT+TGG | + | chr8.1:58659263-58659282 | MS.gene067217:CDS | 55.0% | |
| ! | AGTCCATTGTTGGTGGGTGC+TGG | + | chr8.1:58660369-58660388 | MS.gene067217:CDS | 55.0% |
| ! | GATAGAGCGCTCACACTGCA+TGG | - | chr8.1:58659326-58659345 | None:intergenic | 55.0% |
| ! | GATATGATGGAGGCCTGTGC+TGG | - | chr8.1:58659295-58659314 | None:intergenic | 55.0% |
| ! | GGTTGGCTCAGAAGAGGAGT+TGG | - | chr8.1:58658983-58659002 | None:intergenic | 55.0% |
| !! | AACGAGGGATGAAGTGCCGA+TGG | - | chr8.1:58659560-58659579 | None:intergenic | 55.0% |
| !! | AGGCTTGCTGTGGTGTTTGG+TGG | + | chr8.1:58660339-58660358 | MS.gene067217:CDS | 55.0% |
| !! | AGGGCACTCCCTTTTGTCTC+AGG | - | chr8.1:58660471-58660490 | None:intergenic | 55.0% |
| !! | ATGAAGTGCCGATGGTAGCG+CGG | - | chr8.1:58659552-58659571 | None:intergenic | 55.0% |
| !! | GCTAGGCTTGCTGTGGTGTT+TGG | + | chr8.1:58660336-58660355 | MS.gene067217:CDS | 55.0% |
| !! | GTCTATGGCTAGGCTTGCTG+TGG | + | chr8.1:58660329-58660348 | MS.gene067217:CDS | 55.0% |
| !! | GTTCTAGCTTCCGAGCTCGT+TGG | + | chr8.1:58659577-58659596 | MS.gene067217:CDS | 55.0% |
| !! | TTGTTGGTGGGTGCTGGTAG+AGG | + | chr8.1:58660375-58660394 | MS.gene067217:CDS | 55.0% |
| CCGAGCTCGTTGGAAAGCGA+TGG | + | chr8.1:58659587-58659606 | MS.gene067217:CDS | 60.0% | |
| CGAGCTCGGAAGCTAGAACG+AGG | - | chr8.1:58659576-58659595 | None:intergenic | 60.0% | |
| CTCGTTGGAAAGCGATGGCG+AGG | + | chr8.1:58659592-58659611 | MS.gene067217:CDS | 60.0% | |
| TCACCGGTGCAGTGCCATGA+TGG | - | chr8.1:58659184-58659203 | None:intergenic | 60.0% | |
| GGATTCGGCCGCGCTACCAT+CGG | + | chr8.1:58659541-58659560 | MS.gene067217:CDS | 65.0% | |
| GGCTTGGGATGGGCCAGCAC+AGG | + | chr8.1:58659279-58659298 | MS.gene067217:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 58658971 | 58660551 | 58658971 | ID=MS.gene067217 |
| chr8.1 | mRNA | 58658971 | 58660551 | 58658971 | ID=MS.gene067217.t1;Parent=MS.gene067217 |
| chr8.1 | exon | 58658971 | 58660551 | 58658971 | ID=MS.gene067217.t1.exon1;Parent=MS.gene067217.t1 |
| chr8.1 | CDS | 58658971 | 58660551 | 58658971 | ID=cds.MS.gene067217.t1;Parent=MS.gene067217.t1 |
| Gene Sequence |
| Protein sequence |
