Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067480.t1 | XP_013465608.1 | 96.7 | 396 | 9 | 2 | 1 | 392 | 1 | 396 | 3.80E-217 | 763.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067480.t1 | P49243 | 70.1 | 405 | 105 | 5 | 1 | 391 | 1 | 403 | 1.4e-159 | 563.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067480.t1 | A0A072VC78 | 96.7 | 396 | 9 | 2 | 1 | 392 | 1 | 396 | 2.7e-217 | 763.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057285 | MS.gene067480 | 0.801043 | 1.08E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067480.t1 | MTR_2g105100 | 96.717 | 396 | 9 | 2 | 1 | 392 | 1 | 396 | 0.0 | 781 |
| MS.gene067480.t1 | MTR_4g007180 | 71.676 | 346 | 98 | 0 | 47 | 392 | 31 | 376 | 0.0 | 518 |
| MS.gene067480.t1 | MTR_5g009640 | 86.957 | 207 | 8 | 1 | 186 | 392 | 168 | 355 | 1.80e-124 | 363 |
| MS.gene067480.t1 | MTR_7g006210 | 80.488 | 41 | 8 | 0 | 15 | 55 | 13 | 53 | 5.47e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067480.t1 | AT1G62640 | 70.123 | 405 | 105 | 5 | 1 | 391 | 1 | 403 | 0.0 | 576 |
| MS.gene067480.t1 | AT1G62640 | 70.123 | 405 | 105 | 5 | 1 | 391 | 1 | 403 | 0.0 | 576 |
Find 85 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAAGCGGCGTGTTCTTTC+CGG | 0.182127 | 2.4:+538901 | MS.gene067480:CDS |
| ATTGAGGAAGATGGTTTATT+TGG | 0.185874 | 2.4:+540954 | MS.gene067480:CDS |
| TTTCAAAATGTCCTAGTTAT+TGG | 0.207372 | 2.4:+540463 | MS.gene067480:CDS |
| ATATCGAATTTGTCTGATTA+TGG | 0.266100 | 2.4:+541572 | MS.gene067480:CDS |
| GCTTTGGTGCTGGTCTTACT+TGG | 0.294251 | 2.4:+541684 | MS.gene067480:CDS |
| CGCTTTCACGGTATGTTGAT+TGG | 0.314748 | 2.4:+540494 | MS.gene067480:CDS |
| GCACGAATACGAGGACTTCT+TGG | 0.331899 | 2.4:-541170 | None:intergenic |
| TATCAGCGGCATGTCACATT+AGG | 0.332316 | 2.4:+540353 | MS.gene067480:CDS |
| GGGTTCGGCAATTGTTCGTT+GGG | 0.335349 | 2.4:+541706 | MS.gene067480:CDS |
| TTGTAAATGGCAAATGCATC+TGG | 0.341691 | 2.4:+538246 | None:intergenic |
| GGGGTTCGGCAATTGTTCGT+TGG | 0.358542 | 2.4:+541705 | MS.gene067480:CDS |
| TCGATGTGCACATTAATATA+AGG | 0.359570 | 2.4:-539624 | None:intergenic |
| ATCAGCGGCATGTCACATTA+GGG | 0.361989 | 2.4:+540354 | MS.gene067480:CDS |
| GCAGCTGCTGGCTTTGGTGC+TGG | 0.366517 | 2.4:+541674 | MS.gene067480:CDS |
| ACTATTGCAGCTGCTGGCTT+TGG | 0.367399 | 2.4:+541668 | MS.gene067480:CDS |
| TGATTCAAATGGTTCTTTGC+GGG | 0.369486 | 2.4:+541138 | MS.gene067480:CDS |
| TTCCTGTATCTAGTATTGAT+TGG | 0.387690 | 2.4:+541278 | MS.gene067480:CDS |
| CTTTGGTGCTGGTCTTACTT+GGG | 0.392366 | 2.4:+541685 | MS.gene067480:CDS |
| AATAATGCATTTGATTCAAA+TGG | 0.394336 | 2.4:+541127 | MS.gene067480:CDS |
| TGCTGGTCTTACTTGGGGTT+CGG | 0.404630 | 2.4:+541691 | MS.gene067480:CDS |
| CAGCTGCATCAATAATCCTT+TGG | 0.407283 | 2.4:-541517 | None:intergenic |
| GGAAAGCTTACTCTGAAGTT+AGG | 0.415230 | 2.4:-538282 | None:intergenic |
| TATTCGTGCATTCAAATGAA+TGG | 0.444635 | 2.4:+541184 | MS.gene067480:CDS |
| TGATTGGTTACTTCTACATC+AGG | 0.454973 | 2.4:+541294 | MS.gene067480:CDS |
| TCCATGGTGTTATGATCTTA+CGG | 0.460411 | 2.4:+540300 | MS.gene067480:CDS |
| TTGGAGCTGATGCGCTTTCA+CGG | 0.462117 | 2.4:+540482 | MS.gene067480:CDS |
| AACTGCTTCATCTAAAGCTA+AGG | 0.466667 | 2.4:-541618 | None:intergenic |
| GATCGAATCTGCCCTTGAAA+AGG | 0.468393 | 2.4:+541249 | MS.gene067480:CDS |
| GCAGCTGCAATAGTTTGTCC+TGG | 0.469553 | 2.4:-541659 | None:intergenic |
| TGCTTGTAGTGGATTTGTGT+CGG | 0.472440 | 2.4:+540324 | MS.gene067480:CDS |
| TTGATTCAAATGGTTCTTTG+CGG | 0.473758 | 2.4:+541137 | MS.gene067480:CDS |
| TCACGTAGGCATTTGAATGC+TGG | 0.476282 | 2.4:+541085 | MS.gene067480:intron |
| AACACGCCGCTTGCGAATCC+CGG | 0.477291 | 2.4:-538893 | None:intergenic |
| GCTTGTAGTGGATTTGTGTC+GGG | 0.479026 | 2.4:+540325 | MS.gene067480:CDS |
| AACCAATCAATACTAGATAC+AGG | 0.479548 | 2.4:-541280 | None:intergenic |
| GAGAGCTTGACAACCATAGC+GGG | 0.486425 | 2.4:+539547 | MS.gene067480:CDS |
| GGGTGCAAGTTGGTTGGATG+TGG | 0.493443 | 2.4:+538787 | MS.gene067480:CDS |
| AATATAAGGTCAATATCATC+AGG | 0.496448 | 2.4:-539610 | None:intergenic |
| GATCTTACGGCTGCTTGTAG+TGG | 0.496473 | 2.4:+540313 | MS.gene067480:CDS |
| CGATGAGTGGTAGAGAGAGA+AGG | 0.504271 | 2.4:-538303 | None:intergenic |
| GCGCATCAGCTCCAATAACT+AGG | 0.506447 | 2.4:-540474 | None:intergenic |
| GGACAAACTATTGCAGCTGC+TGG | 0.512164 | 2.4:+541662 | MS.gene067480:CDS |
| GCCTGCGATATTGAGGAAGA+TGG | 0.512903 | 2.4:+540945 | MS.gene067480:CDS |
| GCTAGAAATCCCCTCAGAAA+AGG | 0.513439 | 2.4:+541547 | MS.gene067480:CDS |
| CACGAATACGAGGACTTCTT+GGG | 0.514096 | 2.4:-541169 | None:intergenic |
| TTTGGTGCTGGTCTTACTTG+GGG | 0.522486 | 2.4:+541686 | MS.gene067480:CDS |
| ACTGCAGGCCTGCGATATTG+AGG | 0.537024 | 2.4:+540938 | MS.gene067480:intron |
| TGCTGGTGCTGTAGTAGTAC+AGG | 0.544366 | 2.4:+540552 | MS.gene067480:CDS |
| GAATGGATATATGCTCGCAC+CGG | 0.545418 | 2.4:+538874 | MS.gene067480:CDS |
| TCATTAGTAATCTGAAGAGC+TGG | 0.548424 | 2.4:-538820 | None:intergenic |
| AGAAGTGGCATGGTTAAGCC+AGG | 0.552428 | 2.4:+541641 | MS.gene067480:CDS |
| TGTAAATGGCAAATGCATCT+GGG | 0.556330 | 2.4:+538247 | None:intergenic |
| ACCATCTTCCTCAATATCGC+AGG | 0.558194 | 2.4:-540946 | None:intergenic |
| ATTCAAGGGTGCAAGTTGGT+TGG | 0.559414 | 2.4:+538781 | MS.gene067480:CDS |
| TTAGATGAAGCAGTTAGAAG+TGG | 0.559716 | 2.4:+541626 | MS.gene067480:CDS |
| GATTCAAATGGTTCTTTGCG+GGG | 0.563217 | 2.4:+541139 | MS.gene067480:CDS |
| TTGCAGATTCAACAACAACT+TGG | 0.564894 | 2.4:+540265 | MS.gene067480:intron |
| TTATTGATGCAGCTGCGACT+CGG | 0.566649 | 2.4:+541525 | MS.gene067480:CDS |
| CTCGCACCGGGATTCGCAAG+CGG | 0.568254 | 2.4:+538887 | MS.gene067480:CDS |
| ATAGTGATGGTAGTGGTGTA+AGG | 0.570485 | 2.4:+540988 | MS.gene067480:CDS |
| AATGGATATATGCTCGCACC+GGG | 0.571317 | 2.4:+538875 | MS.gene067480:CDS |
| GAATCTGCCCTTGAAAAGGC+TGG | 0.573884 | 2.4:+541253 | MS.gene067480:CDS |
| ACTGCTTCATCTAAAGCTAA+GGG | 0.574656 | 2.4:-541617 | None:intergenic |
| GAAAGCTCTCGAGATGGCAA+AGG | 0.579481 | 2.4:+539582 | MS.gene067480:CDS |
| TTGTTGATACTAGTGATGAA+TGG | 0.581054 | 2.4:+538857 | MS.gene067480:CDS |
| TTCATCTAAAGCTAAGGGAA+TGG | 0.584089 | 2.4:-541612 | None:intergenic |
| ATTAATGTGCACATCGACAC+CGG | 0.593248 | 2.4:+539630 | MS.gene067480:CDS |
| TTTGATTCAAGGGTGCAAGT+TGG | 0.600224 | 2.4:+538777 | MS.gene067480:CDS |
| AATAAATGCAGGCAAACCAA+AGG | 0.611891 | 2.4:+541501 | MS.gene067480:intron |
| AGCTAAGAAAGCTCTCGAGA+TGG | 0.612802 | 2.4:+539576 | MS.gene067480:CDS |
| GATGTGCATAGTGATGGTAG+TGG | 0.613638 | 2.4:+540981 | MS.gene067480:CDS |
| TGTGTCGGGTTTACTATCAG+CGG | 0.619781 | 2.4:+540339 | MS.gene067480:CDS |
| CATTTGAATGCACGAATACG+AGG | 0.622723 | 2.4:-541179 | None:intergenic |
| ATGTTGATTGGACAGACAGA+GGG | 0.624507 | 2.4:+540506 | MS.gene067480:CDS |
| TGAAGCAGTTAGAAGTGGCA+TGG | 0.625016 | 2.4:+541631 | MS.gene067480:CDS |
| AGGGCAGATTCGATCGTCTG+TGG | 0.637559 | 2.4:-541241 | None:intergenic |
| GGTTCGGCAATTGTTCGTTG+GGG | 0.641097 | 2.4:+541707 | MS.gene067480:CDS |
| TCAGCGGCATGTCACATTAG+GGG | 0.641346 | 2.4:+540355 | MS.gene067480:CDS |
| GAATACGAGGACTTCTTGGG+AGG | 0.657174 | 2.4:-541166 | None:intergenic |
| TATGTTGATTGGACAGACAG+AGG | 0.663522 | 2.4:+540505 | MS.gene067480:CDS |
| CTTCAAAATCTCCAAAACCC+AGG | 0.670788 | 2.4:+538388 | MS.gene067480:CDS |
| GAGCTTGACAACCATAGCGG+GGG | 0.680138 | 2.4:+539549 | MS.gene067480:CDS |
| AGAGCTTGACAACCATAGCG+GGG | 0.681161 | 2.4:+539548 | MS.gene067480:CDS |
| GCCGTAAGATCATAACACCA+TGG | 0.699786 | 2.4:-540301 | None:intergenic |
| AGAGAGCTTGACAACCATAG+CGG | 0.710770 | 2.4:+539546 | MS.gene067480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGATTCTAAATACTTA+TGG | - | chr2.4:539460-539479 | None:intergenic | 15.0% |
| !! | AAAAGATTCTAAATACTTAT+GGG | - | chr2.4:539459-539478 | None:intergenic | 15.0% |
| !!! | ATAAGTATTTAGAATCTTTT+TGG | + | chr2.4:539459-539478 | MS.gene067480:intron | 15.0% |
| !!! | TGATTATTTTTTATTCAACA+AGG | + | chr2.4:540861-540880 | MS.gene067480:intron | 15.0% |
| !!! | TTATTTTTAATCACACAAAT+GGG | + | chr2.4:538452-538471 | MS.gene067480:intron | 15.0% |
| !!! | TTCAGCATTTTATTTATTAT+AGG | + | chr2.4:538592-538611 | MS.gene067480:intron | 15.0% |
| !!! | TTTATTTTTAATCACACAAA+TGG | + | chr2.4:538451-538470 | MS.gene067480:intron | 15.0% |
| !! | AATAAGTTCATTACTTCAAA+AGG | - | chr2.4:540186-540205 | None:intergenic | 20.0% |
| !! | AATAATGCATTTGATTCAAA+TGG | + | chr2.4:541127-541146 | MS.gene067480:CDS | 20.0% |
| !! | ATTTATTATAGGTTAGAATC+AGG | + | chr2.4:538603-538622 | MS.gene067480:intron | 20.0% |
| !! | TCATATCTTGTGAAAATATA+AGG | - | chr2.4:540816-540835 | None:intergenic | 20.0% |
| !! | TTTATTATAGGTTAGAATCA+GGG | + | chr2.4:538604-538623 | MS.gene067480:intron | 20.0% |
| !!! | ATTTTTTTTAGCTCTAAAGT+CGG | - | chr2.4:538564-538583 | None:intergenic | 20.0% |
| !!! | GATTATTATTTTTCTGAACA+CGG | + | chr2.4:539753-539772 | MS.gene067480:intron | 20.0% |
| !!! | TTTACAGATTTTTGATTCAA+GGG | + | chr2.4:538767-538786 | MS.gene067480:intron | 20.0% |
| ! | AAAATACTATACAAGTTCTG+AGG | + | chr2.4:540783-540802 | MS.gene067480:intron | 25.0% |
| ! | AAATACTTATGGGATTATCT+TGG | - | chr2.4:539449-539468 | None:intergenic | 25.0% |
| ! | AATACTTATGGGATTATCTT+GGG | - | chr2.4:539448-539467 | None:intergenic | 25.0% |
| ! | AATATAAGGTCAATATCATC+AGG | - | chr2.4:539613-539632 | None:intergenic | 25.0% |
| ! | ACAAATTAATAGTTGCACAT+TGG | - | chr2.4:540643-540662 | None:intergenic | 25.0% |
| ! | ATATCGAATTTGTCTGATTA+TGG | + | chr2.4:541572-541591 | MS.gene067480:CDS | 25.0% |
| ! | ATGAACAAATGTGAACATTT+AGG | - | chr2.4:538662-538681 | None:intergenic | 25.0% |
| ! | GAGATATAAATTGATGTCAT+TGG | + | chr2.4:540903-540922 | MS.gene067480:intron | 25.0% |
| ! | TAATGAACTTATTCCTTTGT+TGG | + | chr2.4:540193-540212 | MS.gene067480:intron | 25.0% |
| ! | TACTCAATTAATCACTTAGA+GGG | - | chr2.4:540137-540156 | None:intergenic | 25.0% |
| ! | TCACATTTGTTCATGTTATT+TGG | + | chr2.4:538668-538687 | MS.gene067480:intron | 25.0% |
| ! | TGAACAAATGTGAACATTTA+GGG | - | chr2.4:538661-538680 | None:intergenic | 25.0% |
| ! | TTTCAAAATGTCCTAGTTAT+TGG | + | chr2.4:540463-540482 | MS.gene067480:CDS | 25.0% |
| !! | AAAAGTTTGTTCAAAGGATT+AGG | - | chr2.4:540752-540771 | None:intergenic | 25.0% |
| !! | AAATGTCATTTGAGTTAACT+TGG | + | chr2.4:541457-541476 | MS.gene067480:intron | 25.0% |
| !! | AACTGATATTTGTTACACAT+TGG | - | chr2.4:540603-540622 | None:intergenic | 25.0% |
| !! | AATGTCATTTGAGTTAACTT+GGG | + | chr2.4:541458-541477 | MS.gene067480:intron | 25.0% |
| !! | CACATTTGTTCATGTTATTT+GGG | + | chr2.4:538669-538688 | MS.gene067480:intron | 25.0% |
| !! | CGTCTTAAATTTTACAAAAG+AGG | - | chr2.4:540714-540733 | None:intergenic | 25.0% |
| !!! | AATTTCAAAGTTTTTTGCTC+TGG | + | chr2.4:538333-538352 | MS.gene067480:CDS | 25.0% |
| !!! | ATGTGCAACTATTAATTTGT+TGG | + | chr2.4:540643-540662 | MS.gene067480:intron | 25.0% |
| !!! | CTTTACAGATTTTTGATTCA+AGG | + | chr2.4:538766-538785 | MS.gene067480:intron | 25.0% |
| AAACAGAGAAAAGACAAACA+TGG | - | chr2.4:540669-540688 | None:intergenic | 30.0% | |
| AACCAATCAATACTAGATAC+AGG | - | chr2.4:541283-541302 | None:intergenic | 30.0% | |
| ATGAATTTCACCACATTTAG+CGG | - | chr2.4:540411-540430 | None:intergenic | 30.0% | |
| ATTGAGGAAGATGGTTTATT+TGG | + | chr2.4:540954-540973 | MS.gene067480:CDS | 30.0% | |
| GCATACATGATAATAAATGC+AGG | + | chr2.4:541490-541509 | MS.gene067480:intron | 30.0% | |
| GGATTATCTTGGGAAAAAAA+GGG | - | chr2.4:539438-539457 | None:intergenic | 30.0% | |
| GTAAGAGTAAAAACTAACCT+GGG | - | chr2.4:538408-538427 | None:intergenic | 30.0% | |
| GTACTCAATTAATCACTTAG+AGG | - | chr2.4:540138-540157 | None:intergenic | 30.0% | |
| GTCATAATAAGAAGAATGCT+AGG | + | chr2.4:538697-538716 | MS.gene067480:intron | 30.0% | |
| GTTCATAATGTGTCATATTG+AGG | + | chr2.4:539685-539704 | MS.gene067480:intron | 30.0% | |
| TAAGATGAAGCTTCCATTTA+TGG | + | chr2.4:539390-539409 | MS.gene067480:intron | 30.0% | |
| TACAAAAGAATATCACATGC+TGG | - | chr2.4:541350-541369 | None:intergenic | 30.0% | |
| TATTCGTGCATTCAAATGAA+TGG | + | chr2.4:541184-541203 | MS.gene067480:CDS | 30.0% | |
| TCGATGTGCACATTAATATA+AGG | - | chr2.4:539627-539646 | None:intergenic | 30.0% | |
| TGAAACAGCAAACCTTATTA+AGG | - | chr2.4:539288-539307 | None:intergenic | 30.0% | |
| TGCTTAATTACATAGCTAAG+AGG | - | chr2.4:541055-541074 | None:intergenic | 30.0% | |
| TTCATTTCTGTTAAACTGTC+TGG | + | chr2.4:540426-540445 | MS.gene067480:intron | 30.0% | |
| TTGATTCAAATGGTTCTTTG+CGG | + | chr2.4:541137-541156 | MS.gene067480:CDS | 30.0% | |
| TTGTTGATACTAGTGATGAA+TGG | + | chr2.4:538857-538876 | MS.gene067480:CDS | 30.0% | |
| ! | CAGTTGAAAAGTTTGTTCAA+AGG | - | chr2.4:540758-540777 | None:intergenic | 30.0% |
| ! | TCACCTACAGGATTTTTATT+GGG | + | chr2.4:539186-539205 | MS.gene067480:intron | 30.0% |
| ! | TGCTTAGTTTCTGATTTTTG+AGG | + | chr2.4:538987-539006 | MS.gene067480:intron | 30.0% |
| ! | TTGTTCATGTTATTTGGGTT+CGG | + | chr2.4:538674-538693 | MS.gene067480:intron | 30.0% |
| ! | TTTAATCACACAAATGGGTT+GGG | + | chr2.4:538457-538476 | MS.gene067480:intron | 30.0% |
| ! | TTTTAATCACACAAATGGGT+TGG | + | chr2.4:538456-538475 | MS.gene067480:intron | 30.0% |
| !! | CAAGATGTAGTTCTAAGATT+AGG | + | chr2.4:539346-539365 | MS.gene067480:intron | 30.0% |
| !! | TTCCTGTATCTAGTATTGAT+TGG | + | chr2.4:541278-541297 | MS.gene067480:CDS | 30.0% |
| !! | TTGTGTATCACTTTTCTGAT+TGG | + | chr2.4:541397-541416 | MS.gene067480:intron | 30.0% |
| !! | TTTGTCAGAGTATTCTGTTT+TGG | + | chr2.4:539037-539056 | MS.gene067480:intron | 30.0% |
| !!! | CAGGTTAGTTTTTACTCTTA+CGG | + | chr2.4:538407-538426 | MS.gene067480:intron | 30.0% |
| !!! | GAAATTTTGAAATCGATGAG+TGG | - | chr2.4:538319-538338 | None:intergenic | 30.0% |
| !!! | TTTTGTGTTTGGTTTTGAGT+GGG | - | chr2.4:540065-540084 | None:intergenic | 30.0% |
| !!! | TTTTTGTGTTTGGTTTTGAG+TGG | - | chr2.4:540066-540085 | None:intergenic | 30.0% |
| !!! | TTTTTGTGTTTGTTTTGTGC+AGG | - | chr2.4:539985-540004 | None:intergenic | 30.0% |
| AAGACAGACAATTCCATTAG+CGG | - | chr2.4:538530-538549 | None:intergenic | 35.0% | |
| AATAAATGCAGGCAAACCAA+AGG | + | chr2.4:541501-541520 | MS.gene067480:intron | 35.0% | |
| AGCATCACCAAAAAGAATAC+AGG | - | chr2.4:540533-540552 | None:intergenic | 35.0% | |
| AGCTAAAACCAAAGACTAAC+CGG | - | chr2.4:538923-538942 | None:intergenic | 35.0% | |
| ATAGCTAAAAAGCCACAAAC+AGG | + | chr2.4:539892-539911 | MS.gene067480:intron | 35.0% | |
| ATTACATAGCTAAGAGGAAG+AGG | - | chr2.4:541049-541068 | None:intergenic | 35.0% | |
| CAACAAGGAGAAGTTCTTTA+TGG | + | chr2.4:540876-540895 | MS.gene067480:intron | 35.0% | |
| CCGGCAAAAATAAATACAAC+CGG | - | chr2.4:539234-539253 | None:intergenic | 35.0% | |
| CGGCAAAAATAAATACAACC+GGG | - | chr2.4:539233-539252 | None:intergenic | 35.0% | |
| CGTAAGAGTAAAAACTAACC+TGG | - | chr2.4:538409-538428 | None:intergenic | 35.0% | |
| CTAATGGAATTGTCTGTCTT+TGG | + | chr2.4:538530-538549 | MS.gene067480:intron | 35.0% | |
| GCGTCTCATATTATTGAGAA+GGG | + | chr2.4:541016-541035 | MS.gene067480:intron | 35.0% | |
| GGGATTATCTTGGGAAAAAA+AGG | - | chr2.4:539439-539458 | None:intergenic | 35.0% | |
| GTTGGTATCTTTCAGAGATT+GGG | + | chr2.4:540211-540230 | MS.gene067480:intron | 35.0% | |
| TCATTAGTAATCTGAAGAGC+TGG | - | chr2.4:538823-538842 | None:intergenic | 35.0% | |
| TGAATTTCACCACATTTAGC+GGG | - | chr2.4:540410-540429 | None:intergenic | 35.0% | |
| TGATTCAAATGGTTCTTTGC+GGG | + | chr2.4:541138-541157 | MS.gene067480:CDS | 35.0% | |
| TGCGTCTCATATTATTGAGA+AGG | + | chr2.4:541015-541034 | MS.gene067480:intron | 35.0% | |
| TGTTGGTATCTTTCAGAGAT+TGG | + | chr2.4:540210-540229 | MS.gene067480:intron | 35.0% | |
| TTAGATGAAGCAGTTAGAAG+TGG | + | chr2.4:541626-541645 | MS.gene067480:CDS | 35.0% | |
| TTGCAGATTCAACAACAACT+TGG | + | chr2.4:540265-540284 | MS.gene067480:intron | 35.0% | |
| ! | AACTGCTTCATCTAAAGCTA+AGG | - | chr2.4:541621-541640 | None:intergenic | 35.0% |
| ! | ACTGCTTCATCTAAAGCTAA+GGG | - | chr2.4:541620-541639 | None:intergenic | 35.0% |
| ! | ATTCGATATCACCTTTTCTG+AGG | - | chr2.4:541561-541580 | None:intergenic | 35.0% |
| ! | CACCTACAGGATTTTTATTG+GGG | + | chr2.4:539187-539206 | MS.gene067480:intron | 35.0% |
| ! | GTAAAAACTAACCTGGGTTT+TGG | - | chr2.4:538402-538421 | None:intergenic | 35.0% |
| ! | GTCACCTACAGGATTTTTAT+TGG | + | chr2.4:539185-539204 | MS.gene067480:intron | 35.0% |
| ! | TCTCTGAAAGATACCAACAA+AGG | - | chr2.4:540209-540228 | None:intergenic | 35.0% |
| ! | TGATTGGTTACTTCTACATC+AGG | + | chr2.4:541294-541313 | MS.gene067480:CDS | 35.0% |
| ! | TGTTCATGTTATTTGGGTTC+GGG | + | chr2.4:538675-538694 | MS.gene067480:intron | 35.0% |
| ! | TTCATCTAAAGCTAAGGGAA+TGG | - | chr2.4:541615-541634 | None:intergenic | 35.0% |
| ! | TTCGATATCACCTTTTCTGA+GGG | - | chr2.4:541560-541579 | None:intergenic | 35.0% |
| !! | CTTTGGTGTTTGTTGTGTAT+CGG | + | chr2.4:539061-539080 | MS.gene067480:intron | 35.0% |
| !! | GAGTTAACTTGGGAATTTTG+TGG | + | chr2.4:541468-541487 | MS.gene067480:intron | 35.0% |
| !! | GTATCACTTTTCTGATTGGT+AGG | + | chr2.4:541401-541420 | MS.gene067480:intron | 35.0% |
| !! | TCCATGGTGTTATGATCTTA+CGG | + | chr2.4:540300-540319 | MS.gene067480:CDS | 35.0% |
| !!! | CCGGTTGTATTTATTTTTGC+CGG | + | chr2.4:539231-539250 | MS.gene067480:intron | 35.0% |
| !!! | TGGGTTTTGGAGATTTTGAA+GGG | - | chr2.4:538389-538408 | None:intergenic | 35.0% |
| !!! | TGTTTGTGGCTTTTTAGCTA+TGG | - | chr2.4:539893-539912 | None:intergenic | 35.0% |
| !!! | TTTGTGTTTGGTTTTGAGTG+GGG | - | chr2.4:540064-540083 | None:intergenic | 35.0% |
| AACCATCACCGTAATCCAAA+AGG | - | chr2.4:539100-539119 | None:intergenic | 40.0% | |
| AATCCTGTAGGTGACAAAAG+CGG | - | chr2.4:539180-539199 | None:intergenic | 40.0% | |
| ACATTATGAACCCATACCTG+TGG | - | chr2.4:539676-539695 | None:intergenic | 40.0% | |
| ACCAATCTGAACTGCTCAAA+AGG | - | chr2.4:539139-539158 | None:intergenic | 40.0% | |
| AGACAGACAATTCCATTAGC+GGG | - | chr2.4:538529-538548 | None:intergenic | 40.0% | |
| ATTAATAGATGAGTGGCGTG+GGG | - | chr2.4:540095-540114 | None:intergenic | 40.0% | |
| ATTAATGTGCACATCGACAC+CGG | + | chr2.4:539630-539649 | MS.gene067480:CDS | 40.0% | |
| CAGCTGCATCAATAATCCTT+TGG | - | chr2.4:541520-541539 | None:intergenic | 40.0% | |
| CATTTGAATGCACGAATACG+AGG | - | chr2.4:541182-541201 | None:intergenic | 40.0% | |
| CCACTCATCTATTAATCCGT+TGG | + | chr2.4:540099-540118 | MS.gene067480:intron | 40.0% | |
| CGACAAATAGCAAGCAAAGA+AGG | - | chr2.4:539507-539526 | None:intergenic | 40.0% | |
| CGATACACAACAAACACCAA+AGG | - | chr2.4:539063-539082 | None:intergenic | 40.0% | |
| CTACCAATGCTCTCCATAAA+TGG | - | chr2.4:539406-539425 | None:intergenic | 40.0% | |
| CTCCCCAATAAAAATCCTGT+AGG | - | chr2.4:539192-539211 | None:intergenic | 40.0% | |
| CTTCAAAATCTCCAAAACCC+AGG | + | chr2.4:538388-538407 | MS.gene067480:CDS | 40.0% | |
| GAAGCCATGACAGAAATTGT+TGG | - | chr2.4:538499-538518 | None:intergenic | 40.0% | |
| GATTAATAGATGAGTGGCGT+GGG | - | chr2.4:540096-540115 | None:intergenic | 40.0% | |
| GATTCAAATGGTTCTTTGCG+GGG | + | chr2.4:541139-541158 | MS.gene067480:CDS | 40.0% | |
| GTTTCTGTGTTCTGTTCTGT+TGG | - | chr2.4:540012-540031 | None:intergenic | 40.0% | |
| TGGTATTATCATTGCACTGC+AGG | + | chr2.4:540923-540942 | MS.gene067480:intron | 40.0% | |
| TGTTAAACTGTCTGGATGCA+GGG | + | chr2.4:540434-540453 | MS.gene067480:intron | 40.0% | |
| TTGGCTGCACAAAAAATCCA+TGG | + | chr2.4:540284-540303 | MS.gene067480:CDS | 40.0% | |
| ! | AAGAAGCACAACAAACTAGC+CGG | - | chr2.4:539253-539272 | None:intergenic | 40.0% |
| ! | AGAGGGACCTGTATTCTTTT+TGG | + | chr2.4:540523-540542 | MS.gene067480:CDS | 40.0% |
| ! | ATCCTTTTGGATTACGGTGA+TGG | + | chr2.4:539095-539114 | MS.gene067480:intron | 40.0% |
| ! | ATGTTGATTGGACAGACAGA+GGG | + | chr2.4:540506-540525 | MS.gene067480:CDS | 40.0% |
| ! | CTTCCATTTATGGAGAGCAT+TGG | + | chr2.4:539400-539419 | MS.gene067480:intron | 40.0% |
| ! | GCATGGACTATGCCTTAATA+AGG | + | chr2.4:539273-539292 | MS.gene067480:intron | 40.0% |
| ! | GTCACATTAGGGGTATGAAT+TGG | + | chr2.4:540365-540384 | MS.gene067480:intron | 40.0% |
| ! | TATGTTGATTGGACAGACAG+AGG | + | chr2.4:540505-540524 | MS.gene067480:CDS | 40.0% |
| ! | TCGATATCACCTTTTCTGAG+GGG | - | chr2.4:541559-541578 | None:intergenic | 40.0% |
| ! | TTTGATTCAAGGGTGCAAGT+TGG | + | chr2.4:538777-538796 | MS.gene067480:CDS | 40.0% |
| ! | TTTGGATTACGGTGATGGTT+AGG | + | chr2.4:539100-539119 | MS.gene067480:intron | 40.0% |
| !! | AGTTTGTTGTGCTTCTTGCA+TGG | + | chr2.4:539256-539275 | MS.gene067480:intron | 40.0% |
| !! | ATAGTGATGGTAGTGGTGTA+AGG | + | chr2.4:540988-541007 | MS.gene067480:CDS | 40.0% |
| !! | CCAACGGATTAATAGATGAG+TGG | - | chr2.4:540102-540121 | None:intergenic | 40.0% |
| !! | CTTTGCTTGCTATTTGTCGT+TGG | + | chr2.4:539508-539527 | MS.gene067480:intron | 40.0% |
| !! | GGAAAGCTTACTCTGAAGTT+AGG | - | chr2.4:538285-538304 | None:intergenic | 40.0% |
| !! | GGTTTTGATGTGCATAGTGA+TGG | + | chr2.4:540975-540994 | MS.gene067480:CDS | 40.0% |
| !! | TGCTTGTAGTGGATTTGTGT+CGG | + | chr2.4:540324-540343 | MS.gene067480:CDS | 40.0% |
| !! | TGTTCTTTCCGGTTAGTCTT+TGG | + | chr2.4:538912-538931 | MS.gene067480:intron | 40.0% |
| !!! | ATTCTTTTTGGTGATGCTGC+TGG | + | chr2.4:540535-540554 | MS.gene067480:CDS | 40.0% |
| !!! | CTGGGTTTTGGAGATTTTGA+AGG | - | chr2.4:538390-538409 | None:intergenic | 40.0% |
| !!! | GAGTATTCTGTTTTGGCCTT+TGG | + | chr2.4:539044-539063 | MS.gene067480:intron | 40.0% |
| !!! | GGGTTTTGGAGATTTTGAAG+GGG | - | chr2.4:538388-538407 | None:intergenic | 40.0% |
| !!! | GGTTTTGGAGATTTTGAAGG+GGG | - | chr2.4:538387-538406 | None:intergenic | 40.0% |
| !!! | GTTTTGGAGATTTTGAAGGG+GGG | - | chr2.4:538386-538405 | None:intergenic | 40.0% |
| !!! | TGTGTTTGTTTTGTGCAGGT+TGG | - | chr2.4:539981-540000 | None:intergenic | 40.0% |
| !!! | TTTTGCTCTGGAACTATCGA+AGG | + | chr2.4:538345-538364 | MS.gene067480:CDS | 40.0% |
| AATGGATATATGCTCGCACC+GGG | + | chr2.4:538875-538894 | MS.gene067480:CDS | 45.0% | |
| ACCATCTTCCTCAATATCGC+AGG | - | chr2.4:540949-540968 | None:intergenic | 45.0% | |
| AGAGAGCTTGACAACCATAG+CGG | + | chr2.4:539546-539565 | MS.gene067480:CDS | 45.0% | |
| AGCACTTACTCTCTTCACGT+AGG | + | chr2.4:541071-541090 | MS.gene067480:intron | 45.0% | |
| AGCTAAGAAAGCTCTCGAGA+TGG | + | chr2.4:539576-539595 | MS.gene067480:CDS | 45.0% | |
| ATCAGCGGCATGTCACATTA+GGG | + | chr2.4:540354-540373 | MS.gene067480:CDS | 45.0% | |
| CACGAATACGAGGACTTCTT+GGG | - | chr2.4:541172-541191 | None:intergenic | 45.0% | |
| CGCTTTCACGGTATGTTGAT+TGG | + | chr2.4:540494-540513 | MS.gene067480:CDS | 45.0% | |
| CTGTAAAGACGAGCCGTTAA+AGG | + | chr2.4:539850-539869 | MS.gene067480:intron | 45.0% | |
| CTGTTAAACTGTCTGGATGC+AGG | + | chr2.4:540433-540452 | MS.gene067480:intron | 45.0% | |
| GAATGGATATATGCTCGCAC+CGG | + | chr2.4:538874-538893 | MS.gene067480:CDS | 45.0% | |
| GACAGACAATTCCATTAGCG+GGG | - | chr2.4:538528-538547 | None:intergenic | 45.0% | |
| GATCGAATCTGCCCTTGAAA+AGG | + | chr2.4:541249-541268 | MS.gene067480:CDS | 45.0% | |
| GATGTGCATAGTGATGGTAG+TGG | + | chr2.4:540981-541000 | MS.gene067480:CDS | 45.0% | |
| GCCGTAAGATCATAACACCA+TGG | - | chr2.4:540304-540323 | None:intergenic | 45.0% | |
| GCGCTACCAAAAAGATCATC+CGG | - | chr2.4:539652-539671 | None:intergenic | 45.0% | |
| GCTAGAAATCCCCTCAGAAA+AGG | + | chr2.4:541547-541566 | MS.gene067480:CDS | 45.0% | |
| GGATTAATAGATGAGTGGCG+TGG | - | chr2.4:540097-540116 | None:intergenic | 45.0% | |
| GGTGCCAACAATTTCTGTCA+TGG | + | chr2.4:538492-538511 | MS.gene067480:intron | 45.0% | |
| GTTAAACTGTCTGGATGCAG+GGG | + | chr2.4:540435-540454 | MS.gene067480:intron | 45.0% | |
| TATCAGCGGCATGTCACATT+AGG | + | chr2.4:540353-540372 | MS.gene067480:CDS | 45.0% | |
| TCACGTAGGCATTTGAATGC+TGG | + | chr2.4:541085-541104 | MS.gene067480:intron | 45.0% | |
| TGAAGCAGTTAGAAGTGGCA+TGG | + | chr2.4:541631-541650 | MS.gene067480:CDS | 45.0% | |
| TGTGTCGGGTTTACTATCAG+CGG | + | chr2.4:540339-540358 | MS.gene067480:CDS | 45.0% | |
| TTAAACTGTCTGGATGCAGG+GGG | + | chr2.4:540436-540455 | MS.gene067480:intron | 45.0% | |
| TTATTGATGCAGCTGCGACT+CGG | + | chr2.4:541525-541544 | MS.gene067480:CDS | 45.0% | |
| TTCTCAATGCCCGCTAAATG+TGG | + | chr2.4:540398-540417 | MS.gene067480:intron | 45.0% | |
| TTTGCTTCTCTGCTCGTCTT+GGG | - | chr2.4:539808-539827 | None:intergenic | 45.0% | |
| TTTGTCGTTGGTGTGCTTAC+AGG | + | chr2.4:539520-539539 | MS.gene067480:intron | 45.0% | |
| ! | AGGAAGACCAGCCTTTTCAA+GGG | - | chr2.4:541263-541282 | None:intergenic | 45.0% |
| ! | GCCTTTTGAGCAGTTCAGAT+TGG | + | chr2.4:539135-539154 | MS.gene067480:intron | 45.0% |
| ! | GGCAGCATCCTTTTGGATTA+CGG | + | chr2.4:539089-539108 | MS.gene067480:intron | 45.0% |
| ! | TCGACACCGGATGATCTTTT+TGG | + | chr2.4:539643-539662 | MS.gene067480:CDS | 45.0% |
| ! | TTTTGCTTCTCTGCTCGTCT+TGG | - | chr2.4:539809-539828 | None:intergenic | 45.0% |
| !! | AGGGTGTTGAAGCAAACCAA+CGG | - | chr2.4:540118-540137 | None:intergenic | 45.0% |
| !! | ATTCAAGGGTGCAAGTTGGT+TGG | + | chr2.4:538781-538800 | MS.gene067480:CDS | 45.0% |
| !! | CTATGGTTTTGCTGCTGTTC+TGG | - | chr2.4:539876-539895 | None:intergenic | 45.0% |
| !! | CTTTGGTGCTGGTCTTACTT+GGG | + | chr2.4:541685-541704 | MS.gene067480:CDS | 45.0% |
| !! | GCTTGTAGTGGATTTGTGTC+GGG | + | chr2.4:540325-540344 | MS.gene067480:CDS | 45.0% |
| !! | GTTTGTTGTGTATCGGTCCT+GGG | + | chr2.4:539068-539087 | MS.gene067480:intron | 45.0% |
| !! | TGTTTGTTGTGTATCGGTCC+TGG | + | chr2.4:539067-539086 | MS.gene067480:intron | 45.0% |
| !! | TTTGGTGCTGGTCTTACTTG+GGG | + | chr2.4:541686-541705 | MS.gene067480:CDS | 45.0% |
| AAGCGGCTGCTAGACACTAA+AGG | - | chr2.4:539163-539182 | None:intergenic | 50.0% | |
| AATCCAAAAGGATGCTGCCC+AGG | - | chr2.4:539088-539107 | None:intergenic | 50.0% | |
| AGAAGTGGCATGGTTAAGCC+AGG | + | chr2.4:541641-541660 | MS.gene067480:CDS | 50.0% | |
| AGAGCTTGACAACCATAGCG+GGG | + | chr2.4:539548-539567 | MS.gene067480:CDS | 50.0% | |
| ATTGTTGGCACCTGAGACCT+CGG | - | chr2.4:538484-538503 | None:intergenic | 50.0% | |
| CGATGAGTGGTAGAGAGAGA+AGG | - | chr2.4:538306-538325 | None:intergenic | 50.0% | |
| GAAAGCTCTCGAGATGGCAA+AGG | + | chr2.4:539582-539601 | MS.gene067480:CDS | 50.0% | |
| GAATACGAGGACTTCTTGGG+AGG | - | chr2.4:541169-541188 | None:intergenic | 50.0% | |
| GAATCTGCCCTTGAAAAGGC+TGG | + | chr2.4:541253-541272 | MS.gene067480:CDS | 50.0% | |
| GAGAGCTTGACAACCATAGC+GGG | + | chr2.4:539547-539566 | MS.gene067480:CDS | 50.0% | |
| GATCTTACGGCTGCTTGTAG+TGG | + | chr2.4:540313-540332 | MS.gene067480:CDS | 50.0% | |
| GCACGAATACGAGGACTTCT+TGG | - | chr2.4:541173-541192 | None:intergenic | 50.0% | |
| GCCTGCGATATTGAGGAAGA+TGG | + | chr2.4:540945-540964 | MS.gene067480:CDS | 50.0% | |
| GCGCATCAGCTCCAATAACT+AGG | - | chr2.4:540477-540496 | None:intergenic | 50.0% | |
| GCTTCAATTAGCCCCGCTAA+TGG | + | chr2.4:538514-538533 | MS.gene067480:intron | 50.0% | |
| GGACAAACTATTGCAGCTGC+TGG | + | chr2.4:541662-541681 | MS.gene067480:CDS | 50.0% | |
| GGGTTCGGCAATTGTTCGTT+GGG | + | chr2.4:541706-541725 | MS.gene067480:CDS | 50.0% | |
| GGTTCGGCAATTGTTCGTTG+GGG | + | chr2.4:541707-541726 | MS.gene067480:CDS | 50.0% | |
| GTGTGTGTTGTGCCTGTTTG+TGG | - | chr2.4:539907-539926 | None:intergenic | 50.0% | |
| TCAGCGGCATGTCACATTAG+GGG | + | chr2.4:540355-540374 | MS.gene067480:CDS | 50.0% | |
| TGGGGAGTTCCGCCTATATA+CGG | + | chr2.4:539205-539224 | MS.gene067480:intron | 50.0% | |
| TTGGAGCTGATGCGCTTTCA+CGG | + | chr2.4:540482-540501 | MS.gene067480:CDS | 50.0% | |
| ! | CAGGAAGACCAGCCTTTTCA+AGG | - | chr2.4:541264-541283 | None:intergenic | 50.0% |
| ! | GCAGCTGCAATAGTTTGTCC+TGG | - | chr2.4:541662-541681 | None:intergenic | 50.0% |
| ! | GCTGCTGTTCTGGCCTTTAA+CGG | - | chr2.4:539866-539885 | None:intergenic | 50.0% |
| ! | GGGGCTTGCGTTTTTGTGTT+TGG | - | chr2.4:540076-540095 | None:intergenic | 50.0% |
| !! | ACTATTGCAGCTGCTGGCTT+TGG | + | chr2.4:541668-541687 | MS.gene067480:CDS | 50.0% |
| !! | AGATTTTGAAGGGGGGAGAG+TGG | - | chr2.4:538379-538398 | None:intergenic | 50.0% |
| !! | GCTTTGGTGCTGGTCTTACT+TGG | + | chr2.4:541684-541703 | MS.gene067480:CDS | 50.0% |
| !! | TGCTGGTCTTACTTGGGGTT+CGG | + | chr2.4:541691-541710 | MS.gene067480:CDS | 50.0% |
| !! | TGCTGGTGCTGTAGTAGTAC+AGG | + | chr2.4:540552-540571 | MS.gene067480:CDS | 50.0% |
| !! | TTTGTGCAGGTTGGTTCGTG+TGG | - | chr2.4:539972-539991 | None:intergenic | 50.0% |
| !!! | TCTTTTTGGTAGCGCTCCAC+AGG | + | chr2.4:539657-539676 | MS.gene067480:CDS | 50.0% |
| !!! | TGTTTGGTTTTGAGTGGGGC+TGG | - | chr2.4:540060-540079 | None:intergenic | 50.0% |
| ACTGCAGGCCTGCGATATTG+AGG | + | chr2.4:540938-540957 | MS.gene067480:intron | 55.0% | |
| AGGGCAGATTCGATCGTCTG+TGG | - | chr2.4:541244-541263 | None:intergenic | 55.0% | |
| GAGCTTGACAACCATAGCGG+GGG | + | chr2.4:539549-539568 | MS.gene067480:CDS | 55.0% | |
| GGGGTTCGGCAATTGTTCGT+TGG | + | chr2.4:541705-541724 | MS.gene067480:CDS | 55.0% | |
| ! | TACAACCGGGCGCCGTATAT+AGG | - | chr2.4:539220-539239 | None:intergenic | 55.0% |
| ! | TGGTAGCGCTCCACAGGTAT+GGG | + | chr2.4:539663-539682 | MS.gene067480:intron | 55.0% |
| ! | TTGGTTCGTGTGGACAGTGG+GGG | - | chr2.4:539962-539981 | None:intergenic | 55.0% |
| !! | ACACAAATGGGTTGGGACCG+AGG | + | chr2.4:538464-538483 | MS.gene067480:intron | 55.0% |
| !! | AGGTTGGTTCGTGTGGACAG+TGG | - | chr2.4:539965-539984 | None:intergenic | 55.0% |
| !! | GGGTGCAAGTTGGTTGGATG+TGG | + | chr2.4:538787-538806 | MS.gene067480:CDS | 55.0% |
| !! | GGTTGGTTCGTGTGGACAGT+GGG | - | chr2.4:539964-539983 | None:intergenic | 55.0% |
| !! | GTTGGTTCGTGTGGACAGTG+GGG | - | chr2.4:539963-539982 | None:intergenic | 55.0% |
| !! | TTGGTAGCGCTCCACAGGTA+TGG | + | chr2.4:539662-539681 | MS.gene067480:intron | 55.0% |
| !!! | CAGCCGCTTTTGTCACCTAC+AGG | + | chr2.4:539174-539193 | MS.gene067480:intron | 55.0% |
| AACACGCCGCTTGCGAATCC+CGG | - | chr2.4:538896-538915 | None:intergenic | 60.0% | |
| AACTGTCTGGATGCAGGGGG+TGG | + | chr2.4:540439-540458 | MS.gene067480:intron | 60.0% | |
| ACAAAGCCTAGCAGCCTGCC+AGG | + | chr2.4:540030-540049 | MS.gene067480:intron | 60.0% | |
| CGCAAGCGGCGTGTTCTTTC+CGG | + | chr2.4:538901-538920 | MS.gene067480:CDS | 60.0% | |
| TTCCGCCTATATACGGCGCC+CGG | + | chr2.4:539212-539231 | MS.gene067480:intron | 60.0% | |
| ! | AACCGGGCGCCGTATATAGG+CGG | - | chr2.4:539217-539236 | None:intergenic | 60.0% |
| ! | CTTGACAACCATAGCGGGGG+AGG | + | chr2.4:539552-539571 | MS.gene067480:CDS | 60.0% |
| ! | GGTCCTGGGCAGCATCCTTT+TGG | + | chr2.4:539082-539101 | MS.gene067480:intron | 60.0% |
| CTCGCACCGGGATTCGCAAG+CGG | + | chr2.4:538887-538906 | MS.gene067480:CDS | 65.0% | |
| CTTAGCTGCCTCCCCCGCTA+TGG | - | chr2.4:539563-539582 | None:intergenic | 65.0% | |
| TCGTGTGGACAGTGGGGGTG+TGG | - | chr2.4:539957-539976 | None:intergenic | 65.0% | |
| ! | CGTGTGGACAGTGGGGGTGT+GGG | - | chr2.4:539956-539975 | None:intergenic | 65.0% |
| ! | TGGGTTGGGACCGAGGTCTC+AGG | + | chr2.4:538471-538490 | MS.gene067480:intron | 65.0% |
| !! | GCAGCTGCTGGCTTTGGTGC+TGG | + | chr2.4:541674-541693 | MS.gene067480:CDS | 65.0% |
| !! | TTGAGTGGGGCTGGTTCGCC+TGG | - | chr2.4:540051-540070 | None:intergenic | 65.0% |
| GGTTCGCCTGGCAGGCTGCT+AGG | - | chr2.4:540039-540058 | None:intergenic | 70.0% | |
| !! | GTGGGGCTGGTTCGCCTGGC+AGG | - | chr2.4:540047-540066 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 538252 | 541733 | 538252 | ID=MS.gene067480 |
| chr2.4 | mRNA | 538252 | 541733 | 538252 | ID=MS.gene067480.t1;Parent=MS.gene067480 |
| chr2.4 | exon | 538252 | 538409 | 538252 | ID=MS.gene067480.t1.exon1;Parent=MS.gene067480.t1 |
| chr2.4 | CDS | 538252 | 538409 | 538252 | ID=cds.MS.gene067480.t1;Parent=MS.gene067480.t1 |
| chr2.4 | exon | 538774 | 538922 | 538774 | ID=MS.gene067480.t1.exon2;Parent=MS.gene067480.t1 |
| chr2.4 | CDS | 538774 | 538922 | 538774 | ID=cds.MS.gene067480.t1;Parent=MS.gene067480.t1 |
| chr2.4 | exon | 539542 | 539678 | 539542 | ID=MS.gene067480.t1.exon3;Parent=MS.gene067480.t1 |
| chr2.4 | CDS | 539542 | 539678 | 539542 | ID=cds.MS.gene067480.t1;Parent=MS.gene067480.t1 |
| chr2.4 | exon | 540271 | 540376 | 540271 | ID=MS.gene067480.t1.exon4;Parent=MS.gene067480.t1 |
| chr2.4 | CDS | 540271 | 540376 | 540271 | ID=cds.MS.gene067480.t1;Parent=MS.gene067480.t1 |
| chr2.4 | exon | 540455 | 540573 | 540455 | ID=MS.gene067480.t1.exon5;Parent=MS.gene067480.t1 |
| chr2.4 | CDS | 540455 | 540573 | 540455 | ID=cds.MS.gene067480.t1;Parent=MS.gene067480.t1 |
| chr2.4 | exon | 540945 | 541009 | 540945 | ID=MS.gene067480.t1.exon6;Parent=MS.gene067480.t1 |
| chr2.4 | CDS | 540945 | 541009 | 540945 | ID=cds.MS.gene067480.t1;Parent=MS.gene067480.t1 |
| chr2.4 | exon | 541093 | 541315 | 541093 | ID=MS.gene067480.t1.exon7;Parent=MS.gene067480.t1 |
| chr2.4 | CDS | 541093 | 541315 | 541093 | ID=cds.MS.gene067480.t1;Parent=MS.gene067480.t1 |
| chr2.4 | exon | 541512 | 541733 | 541512 | ID=MS.gene067480.t1.exon8;Parent=MS.gene067480.t1 |
| chr2.4 | CDS | 541512 | 541733 | 541512 | ID=cds.MS.gene067480.t1;Parent=MS.gene067480.t1 |
| Gene Sequence |
| Protein sequence |
