Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067551.t1 | ABC75363.2 | 75.4 | 459 | 16 | 6 | 1 | 363 | 27 | 484 | 3.10E-165 | 591.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067551.t1 | Q56XV8 | 56.4 | 450 | 98 | 7 | 10 | 362 | 30 | 478 | 5.4e-118 | 425.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067551.t1 | G7JJX9 | 75.4 | 459 | 16 | 6 | 1 | 363 | 27 | 484 | 2.2e-165 | 591.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059128 | MS.gene067551 | 0.817177 | 3.78E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067551.t1 | MTR_4g084130 | 75.055 | 453 | 16 | 6 | 7 | 363 | 33 | 484 | 0.0 | 620 |
| MS.gene067551.t1 | MTR_4g084130 | 81.183 | 372 | 14 | 5 | 47 | 363 | 2 | 372 | 0.0 | 561 |
| MS.gene067551.t1 | MTR_4g057970 | 48.584 | 459 | 139 | 6 | 1 | 363 | 35 | 492 | 3.21e-133 | 393 |
| MS.gene067551.t1 | MTR_1g017390 | 35.652 | 460 | 193 | 8 | 3 | 363 | 37 | 492 | 1.04e-79 | 255 |
| MS.gene067551.t1 | MTR_1g017380 | 35.652 | 460 | 193 | 8 | 3 | 363 | 37 | 492 | 1.32e-79 | 255 |
| MS.gene067551.t1 | MTR_1g090130 | 34.146 | 410 | 196 | 7 | 14 | 351 | 33 | 440 | 5.23e-63 | 211 |
| MS.gene067551.t1 | MTR_1g090140 | 33.007 | 409 | 202 | 5 | 14 | 351 | 33 | 440 | 8.23e-63 | 210 |
| MS.gene067551.t1 | MTR_8g017080 | 30.221 | 407 | 212 | 5 | 16 | 351 | 36 | 441 | 3.96e-53 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067551.t1 | AT5G18820 | 55.748 | 461 | 104 | 8 | 1 | 362 | 19 | 478 | 3.41e-146 | 426 |
| MS.gene067551.t1 | AT5G18820 | 58.228 | 395 | 94 | 5 | 1 | 325 | 19 | 412 | 3.93e-136 | 395 |
| MS.gene067551.t1 | AT5G18820 | 61.828 | 372 | 85 | 6 | 47 | 362 | 2 | 372 | 1.45e-135 | 395 |
| MS.gene067551.t1 | AT2G28000 | 47.391 | 460 | 144 | 7 | 1 | 363 | 33 | 491 | 1.88e-129 | 383 |
| MS.gene067551.t1 | AT1G55490 | 35.870 | 460 | 191 | 10 | 4 | 363 | 46 | 501 | 8.21e-80 | 256 |
| MS.gene067551.t1 | AT1G55490 | 35.870 | 460 | 191 | 10 | 4 | 363 | 46 | 501 | 8.21e-80 | 256 |
| MS.gene067551.t1 | AT1G55490 | 35.870 | 460 | 191 | 10 | 4 | 363 | 46 | 501 | 8.21e-80 | 256 |
| MS.gene067551.t1 | AT1G55490 | 35.870 | 460 | 191 | 10 | 4 | 363 | 46 | 501 | 8.21e-80 | 256 |
| MS.gene067551.t1 | AT1G55490 | 35.870 | 460 | 191 | 10 | 4 | 363 | 46 | 501 | 8.21e-80 | 256 |
| MS.gene067551.t1 | AT3G13470 | 35.043 | 468 | 195 | 9 | 2 | 363 | 33 | 497 | 1.91e-79 | 254 |
| MS.gene067551.t1 | AT5G56500 | 36.069 | 463 | 193 | 9 | 1 | 363 | 38 | 497 | 2.18e-78 | 252 |
| MS.gene067551.t1 | AT5G56500 | 36.069 | 463 | 193 | 9 | 1 | 363 | 38 | 497 | 2.18e-78 | 252 |
| MS.gene067551.t1 | AT1G26230 | 32.391 | 460 | 204 | 11 | 7 | 363 | 30 | 485 | 1.88e-64 | 214 |
| MS.gene067551.t1 | AT1G26230 | 35.279 | 394 | 176 | 10 | 7 | 325 | 30 | 419 | 1.96e-64 | 212 |
| MS.gene067551.t1 | AT1G26230 | 32.391 | 460 | 204 | 11 | 7 | 363 | 30 | 485 | 1.78e-63 | 213 |
| MS.gene067551.t1 | AT3G23990 | 33.902 | 410 | 197 | 7 | 14 | 351 | 32 | 439 | 5.42e-62 | 208 |
| MS.gene067551.t1 | AT1G26230 | 35.200 | 375 | 182 | 8 | 46 | 363 | 55 | 425 | 7.64e-62 | 207 |
| MS.gene067551.t1 | AT1G26230 | 35.200 | 375 | 182 | 8 | 46 | 363 | 63 | 433 | 9.64e-62 | 207 |
| MS.gene067551.t1 | AT2G33210 | 33.007 | 409 | 202 | 8 | 14 | 351 | 33 | 440 | 4.21e-58 | 198 |
| MS.gene067551.t1 | AT3G13860 | 31.540 | 409 | 208 | 5 | 14 | 351 | 32 | 439 | 3.70e-56 | 192 |
| MS.gene067551.t1 | AT2G33210 | 32.518 | 409 | 199 | 9 | 14 | 351 | 33 | 435 | 7.91e-55 | 189 |
Find 86 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACCGAATGATATCTTCTT+AGG | 0.121291 | 4.2:+31146016 | None:intergenic |
| ATCTTCCATGGAGTTCTTTA+TGG | 0.165963 | 4.2:+31141577 | None:intergenic |
| TACCAGCACTGCAATTATTT+TGG | 0.200241 | 4.2:-31144955 | MS.gene067551:CDS |
| GGATTATCAGCAGTTGCTTT+TGG | 0.205560 | 4.2:-31144913 | MS.gene067551:intron |
| CGGATTTCTCTGTGGAGATT+TGG | 0.213828 | 4.2:-31143205 | MS.gene067551:CDS |
| ATTCCCTTCTTCAGAGAAAT+AGG | 0.235778 | 4.2:+31144883 | None:intergenic |
| TGCCACATATGTCCACCTTT+TGG | 0.268341 | 4.2:-31141612 | MS.gene067551:CDS |
| GTTTGACAATGCTAAAGTTT+TGG | 0.318990 | 4.2:-31143973 | MS.gene067551:CDS |
| GGATTTCTCTGTGGAGATTT+GGG | 0.327581 | 4.2:-31143204 | MS.gene067551:CDS |
| CAAAGAAATAGTTCCTTTGC+TGG | 0.343686 | 4.2:-31143925 | MS.gene067551:CDS |
| TTCTTTCCATCTCCGAGTCC+TGG | 0.378180 | 4.2:+31143780 | None:intergenic |
| ATATGATCCCTTCCTTCAAC+AGG | 0.380233 | 4.2:+31144811 | None:intergenic |
| AAACACTAAGGCTGAAATTC+AGG | 0.392021 | 4.2:-31143092 | MS.gene067551:intron |
| TGGAAAAGACAGTAAAAGAT+TGG | 0.397009 | 4.2:-31144861 | MS.gene067551:CDS |
| TCCTGGTTGGTGATGAAGTA+AGG | 0.397913 | 4.2:+31144011 | None:intergenic |
| ATAGAGAAGATTGGATTTGA+TGG | 0.411296 | 4.2:-31144631 | MS.gene067551:CDS |
| TGCAAGTAAAATGAATGATT+TGG | 0.415477 | 4.2:-31144988 | MS.gene067551:CDS |
| GAAGATCTAGATGAGCAAAT+TGG | 0.420249 | 4.2:-31141560 | MS.gene067551:CDS |
| TCGGAGAAACCCACAATTTG+TGG | 0.428486 | 4.2:-31146050 | MS.gene067551:CDS |
| TGGCGGTATAGCCGTTATAA+AGG | 0.429730 | 4.2:-31142981 | MS.gene067551:CDS |
| TTATTTCTGTACAGATTGAC+AGG | 0.431467 | 4.2:-31144046 | MS.gene067551:intron |
| GATTTGGGTCTTACACTTGA+AGG | 0.439787 | 4.2:-31143189 | MS.gene067551:CDS |
| TACCGAATGATATCTTCTTA+GGG | 0.441126 | 4.2:+31146017 | None:intergenic |
| AAGAGAAGTATTCCTGTTGA+AGG | 0.446858 | 4.2:-31144823 | MS.gene067551:CDS |
| GCTGAAGCTATAGAGAAGAT+TGG | 0.448331 | 4.2:-31144640 | MS.gene067551:CDS |
| CTTGCTCGCACCACAAATTG+TGG | 0.452237 | 4.2:+31146040 | None:intergenic |
| TATCATTCGGTAAAGAATGC+AGG | 0.460046 | 4.2:-31146006 | MS.gene067551:CDS |
| TCCATGGAGTTCTTTATGGC+AGG | 0.461420 | 4.2:+31141581 | None:intergenic |
| ACCTCTGTGGTAATTGAAGA+AGG | 0.463210 | 4.2:-31144574 | MS.gene067551:CDS |
| AAATCCTATTTCTCTGAAGA+AGG | 0.464428 | 4.2:-31144887 | MS.gene067551:CDS |
| TGAATTAGATACCTTTATAA+CGG | 0.468547 | 4.2:+31142970 | None:intergenic |
| GCAGGGATAATTTACAAGTC+GGG | 0.480843 | 4.2:-31145988 | MS.gene067551:CDS |
| AGCCAAAATAATTGCAGTGC+TGG | 0.482530 | 4.2:+31144953 | None:intergenic |
| TAGAGAAGATTGGATTTGAT+GGG | 0.484021 | 4.2:-31144630 | MS.gene067551:CDS |
| CTCTCTTACCGTTGGACCAA+AGG | 0.484253 | 4.2:-31145942 | MS.gene067551:intron |
| GGAAAAGACAGTAAAAGATT+GGG | 0.491178 | 4.2:-31144860 | MS.gene067551:CDS |
| TTGCTCGCACCACAAATTGT+GGG | 0.499235 | 4.2:+31146041 | None:intergenic |
| GAGAGAATTGCGAAACTCAC+TGG | 0.501133 | 4.2:-31143001 | MS.gene067551:CDS |
| GCTGTAGCCTCGATTTCTGC+TGG | 0.501335 | 4.2:-31144691 | MS.gene067551:CDS |
| TCTCTGAGAGCTTTCTCGAA+TGG | 0.502708 | 4.2:+31143020 | None:intergenic |
| TTGCTCATCTAGATCTTCCA+TGG | 0.508453 | 4.2:+31141565 | None:intergenic |
| CTTTCATTGCAGTACCAAGC+TGG | 0.512828 | 4.2:+31143154 | None:intergenic |
| CAAGATATTGCGCTAATGAC+GGG | 0.512997 | 4.2:-31143747 | MS.gene067551:CDS |
| AGCCCTAAGAAGATATCATT+CGG | 0.514048 | 4.2:-31146019 | MS.gene067551:CDS |
| GATGCTGTCTCTCTTACCGT+TGG | 0.529324 | 4.2:-31145950 | MS.gene067551:CDS |
| ACAAGATATTGCGCTAATGA+CGG | 0.542621 | 4.2:-31143748 | MS.gene067551:CDS |
| AAATGTCCAGGACTCGGAGA+TGG | 0.545018 | 4.2:-31143786 | MS.gene067551:CDS |
| GAAGTATTCCTGTTGAAGGA+AGG | 0.546321 | 4.2:-31144819 | MS.gene067551:CDS |
| TGCTCCGCTCTTAATTATTG+CGG | 0.552174 | 4.2:-31143883 | MS.gene067551:CDS |
| GCTGTAAAATGTCCAGGACT+CGG | 0.553014 | 4.2:-31143792 | MS.gene067551:CDS |
| GGACGTCACTGCACAAGTGT+TGG | 0.553988 | 4.2:-31143859 | MS.gene067551:CDS |
| CACAGAGGTTTCAGATGATG+AGG | 0.555060 | 4.2:+31144588 | None:intergenic |
| TGCAGGGATAATTTACAAGT+CGG | 0.555799 | 4.2:-31145989 | MS.gene067551:CDS |
| TGGCAGGTATCAAGTCCAAA+AGG | 0.555888 | 4.2:+31141597 | None:intergenic |
| GTTGCAGCTGTAAAATGTCC+AGG | 0.557223 | 4.2:-31143798 | MS.gene067551:CDS |
| GGTAATTGAAGAAGGGATGA+AGG | 0.557464 | 4.2:-31144566 | MS.gene067551:intron |
| AGTGTTAACCTTTGGTCCAA+CGG | 0.561539 | 4.2:+31145934 | None:intergenic |
| TATTTCTCTGAAGAAGGGAA+TGG | 0.563382 | 4.2:-31144881 | MS.gene067551:CDS |
| GTCCAAAAGGTGGACATATG+TGG | 0.568776 | 4.2:+31141610 | None:intergenic |
| AAGTATTCCTGTTGAAGGAA+GGG | 0.570813 | 4.2:-31144818 | MS.gene067551:CDS |
| ATCATTCGGTAAAGAATGCA+GGG | 0.577354 | 4.2:-31146005 | MS.gene067551:CDS |
| AGTAAAATGAATGATTTGGC+TGG | 0.577859 | 4.2:-31144984 | MS.gene067551:CDS |
| AATCCTATTTCTCTGAAGAA+GGG | 0.583638 | 4.2:-31144886 | MS.gene067551:CDS |
| ATGAATGATTTGGCTGGTGA+TGG | 0.584689 | 4.2:-31144978 | MS.gene067551:CDS |
| ACCTGCCATAAAGAACTCCA+TGG | 0.595150 | 4.2:-31141582 | MS.gene067551:CDS |
| CCTCTGTGGTAATTGAAGAA+GGG | 0.595263 | 4.2:-31144573 | MS.gene067551:CDS |
| GAAGGAAGGGATCATATCAA+AGG | 0.607458 | 4.2:-31144805 | MS.gene067551:intron |
| TCCGCTCTTAATTATTGCGG+AGG | 0.608855 | 4.2:-31143880 | MS.gene067551:CDS |
| TCCTTACTTCATCACCAACC+AGG | 0.611481 | 4.2:-31144012 | MS.gene067551:CDS |
| TGGTGCTGATATTGTGGCGA+AGG | 0.622265 | 4.2:-31141540 | None:intergenic |
| TTAATAGTGAACAAAATGCA+AGG | 0.624427 | 4.2:-31143831 | MS.gene067551:CDS |
| AGAGAAGATTGGATTTGATG+GGG | 0.625525 | 4.2:-31144629 | MS.gene067551:CDS |
| AGCATTGTCAAACTCCACAA+TGG | 0.627191 | 4.2:+31143983 | None:intergenic |
| GCAAATTGGTGCTGATATTG+TGG | 0.629535 | 4.2:-31141546 | MS.gene067551:CDS |
| TATTTCTGTACAGATTGACA+GGG | 0.629984 | 4.2:-31144045 | MS.gene067551:intron |
| GTCATTTCCAGCAGAAATCG+AGG | 0.631622 | 4.2:+31144684 | None:intergenic |
| GCTGGAAATGACGAGTATGT+TGG | 0.642275 | 4.2:-31144673 | MS.gene067551:CDS |
| GGTACAACATCAGACCAGCT+TGG | 0.642489 | 4.2:-31143168 | MS.gene067551:CDS |
| CCCTTCTTCAATTACCACAG+AGG | 0.655595 | 4.2:+31144573 | None:intergenic |
| CTCATCATCTGAAACCTCTG+TGG | 0.670644 | 4.2:-31144587 | MS.gene067551:CDS |
| AGATGATGAGGATGACTCGA+TGG | 0.671433 | 4.2:+31144600 | None:intergenic |
| CAGGTATCAAGTCCAAAAGG+TGG | 0.673351 | 4.2:+31141600 | None:intergenic |
| CACAGGTGCGGATTTCTCTG+TGG | 0.681100 | 4.2:-31143213 | MS.gene067551:intron |
| ATTTCTGTACAGATTGACAG+GGG | 0.693379 | 4.2:-31144044 | MS.gene067551:intron |
| TCCTCCGCAATAATTAAGAG+CGG | 0.695220 | 4.2:+31143879 | None:intergenic |
| AGAATTGCGAAACTCACTGG+CGG | 0.733428 | 4.2:-31142998 | MS.gene067551:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTGCTATATTTATA+GGG | + | chr4.2:31143100-31143119 | None:intergenic | 10.0% |
| !! | AACATAATATGAATATATAA+AGG | - | chr4.2:31143228-31143247 | MS.gene067551:intron | 10.0% |
| !! | ATTTATGATGATAATAATTA+GGG | - | chr4.2:31143057-31143076 | MS.gene067551:CDS | 10.0% |
| !! | GAACTATTATTAAAATTATT+AGG | + | chr4.2:31143455-31143474 | None:intergenic | 10.0% |
| !! | TAAAAAATTGCTATATTTAT+AGG | + | chr4.2:31143101-31143120 | None:intergenic | 10.0% |
| !! | TATTTATGATGATAATAATT+AGG | - | chr4.2:31143056-31143075 | MS.gene067551:CDS | 10.0% |
| !!! | AACATTCAATTTTATTTTTT+AGG | - | chr4.2:31143379-31143398 | MS.gene067551:intron | 10.0% |
| !!! | AACATTTCATTTTATTTTTT+AGG | + | chr4.2:31143132-31143151 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTGTTTTAGTTT+TGG | - | chr4.2:31143163-31143182 | MS.gene067551:CDS | 10.0% |
| !!! | ACAAAATAATTTTTTTTGTA+AGG | - | chr4.2:31143351-31143370 | MS.gene067551:intron | 10.0% |
| !!! | ACATTCAATTTTATTTTTTA+GGG | - | chr4.2:31143380-31143399 | MS.gene067551:intron | 10.0% |
| !!! | ACATTTCATTTTATTTTTTA+GGG | + | chr4.2:31143131-31143150 | None:intergenic | 10.0% |
| !! | AAACTTAAAGTAATAAATGA+CGG | - | chr4.2:31142413-31142432 | MS.gene067551:intron | 15.0% |
| !! | AAATGTTAAATGAAAACAAA+AGG | + | chr4.2:31144036-31144055 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTACTTAACTGT+TGG | - | chr4.2:31145175-31145194 | MS.gene067551:intron | 15.0% |
| !!! | TTTAGTAATTTATTTGCTTT+TGG | + | chr4.2:31145661-31145680 | None:intergenic | 15.0% |
| !!! | TTTCATTTAACATTTTTAGT+TGG | - | chr4.2:31144041-31144060 | MS.gene067551:intron | 15.0% |
| !! | AAAAAAGTTGTTTATCAAGA+GGG | + | chr4.2:31141821-31141840 | None:intergenic | 20.0% |
| !! | AATTGAATAGAAGAAGAATT+AGG | + | chr4.2:31141692-31141711 | None:intergenic | 20.0% |
| !! | AGTATTTCTTACTCTATTTA+AGG | - | chr4.2:31144725-31144744 | MS.gene067551:intron | 20.0% |
| !! | ATAAGTTATGATATAACAGT+AGG | - | chr4.2:31145482-31145501 | MS.gene067551:intron | 20.0% |
| !! | ATGTCAAAATTATATCCATT+AGG | + | chr4.2:31143191-31143210 | None:intergenic | 20.0% |
| !! | CCAAATTTGGTATATTTATA+AGG | - | chr4.2:31143411-31143430 | MS.gene067551:intron | 20.0% |
| !! | CCTTATAAATATACCAAATT+TGG | + | chr4.2:31143414-31143433 | None:intergenic | 20.0% |
| !! | CTTTCTTATCTATTATTGTA+GGG | - | chr4.2:31144844-31144863 | MS.gene067551:CDS | 20.0% |
| !! | TAAAGGTTGAACATAATAAA+CGG | - | chr4.2:31143245-31143264 | MS.gene067551:intron | 20.0% |
| !! | TCTTTCTTATCTATTATTGT+AGG | - | chr4.2:31144843-31144862 | MS.gene067551:CDS | 20.0% |
| !! | TGAATTAGATACCTTTATAA+CGG | + | chr4.2:31144632-31144651 | None:intergenic | 20.0% |
| !! | TGTCAAAATTATATCCATTA+GGG | + | chr4.2:31143190-31143209 | None:intergenic | 20.0% |
| !! | TTGTGAATGTGAAAAATAAA+TGG | + | chr4.2:31145369-31145388 | None:intergenic | 20.0% |
| !!! | AAAATCTAAAACTCAACTAT+AGG | - | chr4.2:31145012-31145031 | MS.gene067551:intron | 20.0% |
| !!! | ATCCTAAGATTCAATTTTTA+CGG | - | chr4.2:31145589-31145608 | MS.gene067551:intron | 20.0% |
| !!! | ATTTTCATCCATTTAATCTA+AGG | + | chr4.2:31142533-31142552 | None:intergenic | 20.0% |
| !!! | GTTGAATTTTGTTGTTTATA+TGG | - | chr4.2:31144206-31144225 | MS.gene067551:intron | 20.0% |
| !!! | TAGAATTTTACAGATAAAGA+AGG | - | chr4.2:31144531-31144550 | MS.gene067551:intron | 20.0% |
| !!! | TCAAACATATAATTGTTGTT+TGG | + | chr4.2:31142255-31142274 | None:intergenic | 20.0% |
| !!! | TTTATTTTTCACATTCACAA+TGG | - | chr4.2:31145369-31145388 | MS.gene067551:intron | 20.0% |
| ! | AAAAAAAACAATGAGCTACT+TGG | + | chr4.2:31145286-31145305 | None:intergenic | 25.0% |
| ! | AAAAAATATGTTGAGAATGC+AGG | - | chr4.2:31145616-31145635 | MS.gene067551:intron | 25.0% |
| ! | AAAATTGAATCTTAGGATGA+TGG | + | chr4.2:31145587-31145606 | None:intergenic | 25.0% |
| ! | AAAGGTTGAACATAATAAAC+GGG | - | chr4.2:31143246-31143265 | MS.gene067551:intron | 25.0% |
| ! | AAATTGAATCTTAGGATGAT+GGG | + | chr4.2:31145586-31145605 | None:intergenic | 25.0% |
| ! | AAATTGTTGTGAAGAAACAA+TGG | - | chr4.2:31145765-31145784 | MS.gene067551:intron | 25.0% |
| ! | AATGTTATTCTTTCTGAATC+TGG | - | chr4.2:31142389-31142408 | MS.gene067551:intron | 25.0% |
| ! | ACAGTTGAAAAATGAGATAA+TGG | + | chr4.2:31144099-31144118 | None:intergenic | 25.0% |
| ! | ACATTCAGATGAACATAAAT+TGG | - | chr4.2:31143312-31143331 | MS.gene067551:intron | 25.0% |
| ! | AGAGATAAAATAAATGAGCA+CGG | + | chr4.2:31142354-31142373 | None:intergenic | 25.0% |
| ! | CAAAAAAGTTGTTTATCAAG+AGG | + | chr4.2:31141822-31141841 | None:intergenic | 25.0% |
| ! | CTAAAACAAAAAAAATTGCG+AGG | + | chr4.2:31143160-31143179 | None:intergenic | 25.0% |
| ! | GAGATTTATTAATTCAACCA+AGG | - | chr4.2:31144758-31144777 | MS.gene067551:intron | 25.0% |
| ! | GTGAAAAATAAATGGAATTG+AGG | + | chr4.2:31145361-31145380 | None:intergenic | 25.0% |
| ! | TAAAATAAGTCAATCCAAAC+CGG | - | chr4.2:31141998-31142017 | MS.gene067551:intron | 25.0% |
| ! | TATAAGTTCTTTCAGATTGT+TGG | - | chr4.2:31141966-31141985 | MS.gene067551:intron | 25.0% |
| ! | TGAACATAAATTGGTCATTA+AGG | - | chr4.2:31143321-31143340 | MS.gene067551:intron | 25.0% |
| ! | TGCAAGTAAAATGAATGATT+TGG | - | chr4.2:31142611-31142630 | MS.gene067551:intron | 25.0% |
| ! | TTAATAGTGAACAAAATGCA+AGG | - | chr4.2:31143768-31143787 | MS.gene067551:CDS | 25.0% |
| ! | TTACTAAATTTAAGTGCTTG+TGG | - | chr4.2:31145673-31145692 | MS.gene067551:intron | 25.0% |
| ! | TTGAACGAAAATTGATCAAA+GGG | + | chr4.2:31142316-31142335 | None:intergenic | 25.0% |
| ! | TTTGAACGAAAATTGATCAA+AGG | + | chr4.2:31142317-31142336 | None:intergenic | 25.0% |
| !! | AATTTCTTGCATTTTTGCTA+TGG | - | chr4.2:31141708-31141727 | MS.gene067551:intron | 25.0% |
| !! | GAAGTGTTTATTAGCTTATT+TGG | - | chr4.2:31145401-31145420 | MS.gene067551:intron | 25.0% |
| !! | TATTTTATCTCTTATTACGC+AGG | - | chr4.2:31142362-31142381 | MS.gene067551:intron | 25.0% |
| !!! | ATGCAAACATTTGCTTTTTT+TGG | - | chr4.2:31144934-31144953 | MS.gene067551:intron | 25.0% |
| !!! | TTCATAAGTTATTTTCAGCT+TGG | + | chr4.2:31141929-31141948 | None:intergenic | 25.0% |
| !!! | TTTTTATTTTTCCTGCTTGT+AGG | - | chr4.2:31142587-31142606 | MS.gene067551:intron | 25.0% |
| AAAAAGCAAATGTTTGCATG+TGG | + | chr4.2:31144933-31144952 | None:intergenic | 30.0% | |
| AAAATGTAAGCCTAGTATGA+AGG | + | chr4.2:31143926-31143945 | None:intergenic | 30.0% | |
| AACAGACAACAGCTATAATA+GGG | + | chr4.2:31143535-31143554 | None:intergenic | 30.0% | |
| AATTGAATCCCTATACTGTA+TGG | - | chr4.2:31142290-31142309 | MS.gene067551:intron | 30.0% | |
| AGCAAAGTCATTGTGTTAAA+TGG | - | chr4.2:31145320-31145339 | MS.gene067551:intron | 30.0% | |
| AGGTTCTACCTTAGATTAAA+TGG | - | chr4.2:31142522-31142541 | MS.gene067551:intron | 30.0% | |
| ATAGAGAAGATTGGATTTGA+TGG | - | chr4.2:31142968-31142987 | MS.gene067551:CDS | 30.0% | |
| ATAGCCTATACAAGAATCAA+GGG | + | chr4.2:31145255-31145274 | None:intergenic | 30.0% | |
| ATAGGGTGAAAAACAGTTTA+TGG | + | chr4.2:31142131-31142150 | None:intergenic | 30.0% | |
| ATCCAACAAAACCAATAACA+AGG | + | chr4.2:31145201-31145220 | None:intergenic | 30.0% | |
| CAATATAGTTGTTGCATTAC+TGG | + | chr4.2:31144480-31144499 | None:intergenic | 30.0% | |
| CACCGTAAAAATTGAATCTT+AGG | + | chr4.2:31145594-31145613 | None:intergenic | 30.0% | |
| CTATAATAGGGAAAAACACA+GGG | + | chr4.2:31143523-31143542 | None:intergenic | 30.0% | |
| CTGCAAAATAAGCAACTATT+TGG | + | chr4.2:31143988-31144007 | None:intergenic | 30.0% | |
| GCATATAGCACTTATATGAT+AGG | - | chr4.2:31142195-31142214 | MS.gene067551:intron | 30.0% | |
| GGAAAAGACAGTAAAAGATT+GGG | - | chr4.2:31142739-31142758 | MS.gene067551:intron | 30.0% | |
| TAACAGACAACAGCTATAAT+AGG | + | chr4.2:31143536-31143555 | None:intergenic | 30.0% | |
| TACCGAATGATATCTTCTTA+GGG | + | chr4.2:31141585-31141604 | None:intergenic | 30.0% | |
| TAGAGAAGATTGGATTTGAT+GGG | - | chr4.2:31142969-31142988 | MS.gene067551:CDS | 30.0% | |
| TAGCTTATAGAAACAGCTTA+TGG | + | chr4.2:31141887-31141906 | None:intergenic | 30.0% | |
| TAGGGACTAAAATCCAAATT+TGG | - | chr4.2:31143398-31143417 | MS.gene067551:intron | 30.0% | |
| TGCAATCAAGACATTTGAAA+AGG | + | chr4.2:31145746-31145765 | None:intergenic | 30.0% | |
| TGGAAAAGACAGTAAAAGAT+TGG | - | chr4.2:31142738-31142757 | MS.gene067551:intron | 30.0% | |
| TTACCGAATGATATCTTCTT+AGG | + | chr4.2:31141586-31141605 | None:intergenic | 30.0% | |
| TTTAGTCATTTGACTAGCAA+TGG | + | chr4.2:31144799-31144818 | None:intergenic | 30.0% | |
| TTTATATGGTGTAACTGTGT+GGG | - | chr4.2:31144220-31144239 | MS.gene067551:intron | 30.0% | |
| ! | AAAAGTTCTTTTGCACTAGA+TGG | + | chr4.2:31145117-31145136 | None:intergenic | 30.0% |
| ! | AAATCCTATTTCTCTGAAGA+AGG | - | chr4.2:31142712-31142731 | MS.gene067551:intron | 30.0% |
| ! | AATCCTATTTCTCTGAAGAA+GGG | - | chr4.2:31142713-31142732 | MS.gene067551:intron | 30.0% |
| ! | AGTAAAATGAATGATTTGGC+TGG | - | chr4.2:31142615-31142634 | MS.gene067551:intron | 30.0% |
| ! | ATTTTTCACATTCACAATGG+AGG | - | chr4.2:31145372-31145391 | MS.gene067551:intron | 30.0% |
| ! | GGCTTACATTTTTCTATCTT+TGG | - | chr4.2:31143934-31143953 | MS.gene067551:CDS | 30.0% |
| ! | GTTTGACAATGCTAAAGTTT+TGG | - | chr4.2:31143626-31143645 | MS.gene067551:intron | 30.0% |
| ! | TATTTCTGTACAGATTGACA+GGG | - | chr4.2:31143554-31143573 | MS.gene067551:intron | 30.0% |
| !! | AAGAAGCAGTTGATAAGTAA+AGG | + | chr4.2:31144704-31144723 | None:intergenic | 30.0% |
| !! | AATTAGGAAGTGTTAACCTT+TGG | + | chr4.2:31141676-31141695 | None:intergenic | 30.0% |
| !! | AGAAGCAGTTGATAAGTAAA+GGG | + | chr4.2:31144703-31144722 | None:intergenic | 30.0% |
| !! | CAATGCTAAAGTTTTGGTAA+CGG | - | chr4.2:31143632-31143651 | MS.gene067551:intron | 30.0% |
| !! | TTATTTCTGTACAGATTGAC+AGG | - | chr4.2:31143553-31143572 | MS.gene067551:intron | 30.0% |
| !! | TTTGCTATGGTTTCTTTTAC+TGG | - | chr4.2:31141721-31141740 | MS.gene067551:intron | 30.0% |
| !!! | ACATTTTTAGTTGGACAGTA+TGG | - | chr4.2:31144050-31144069 | MS.gene067551:intron | 30.0% |
| !!! | TTGTTATTGGTTTTGTTGGA+TGG | - | chr4.2:31145200-31145219 | MS.gene067551:intron | 30.0% |
| AAACACTAAGGCTGAAATTC+AGG | - | chr4.2:31144507-31144526 | MS.gene067551:intron | 35.0% | |
| AAGTATTCCTGTTGAAGGAA+GGG | - | chr4.2:31142781-31142800 | MS.gene067551:intron | 35.0% | |
| ACAAGATATTGCGCTAATGA+CGG | - | chr4.2:31143851-31143870 | MS.gene067551:CDS | 35.0% | |
| ACATTCACAATGGAGGAATT+TGG | - | chr4.2:31145379-31145398 | MS.gene067551:intron | 35.0% | |
| AGAGAAGATTGGATTTGATG+GGG | - | chr4.2:31142970-31142989 | MS.gene067551:CDS | 35.0% | |
| AGCCCTAAGAAGATATCATT+CGG | - | chr4.2:31141580-31141599 | MS.gene067551:CDS | 35.0% | |
| AGTTCTCAATGACAACTGTT+TGG | - | chr4.2:31143470-31143489 | MS.gene067551:intron | 35.0% | |
| ATCATTCGGTAAAGAATGCA+GGG | - | chr4.2:31141594-31141613 | MS.gene067551:CDS | 35.0% | |
| ATCTTCCATGGAGTTCTTTA+TGG | + | chr4.2:31146025-31146044 | None:intergenic | 35.0% | |
| ATTCCCTTCTTCAGAGAAAT+AGG | + | chr4.2:31142719-31142738 | None:intergenic | 35.0% | |
| ATTTCTGTACAGATTGACAG+GGG | - | chr4.2:31143555-31143574 | MS.gene067551:intron | 35.0% | |
| CAAACATGTTGTATGAGTCT+GGG | + | chr4.2:31142024-31142043 | None:intergenic | 35.0% | |
| CAAAGAAATAGTTCCTTTGC+TGG | - | chr4.2:31143674-31143693 | MS.gene067551:intron | 35.0% | |
| CATAATAAACGGGCATAACA+TGG | - | chr4.2:31143256-31143275 | MS.gene067551:intron | 35.0% | |
| CATAGCCTATACAAGAATCA+AGG | + | chr4.2:31145256-31145275 | None:intergenic | 35.0% | |
| CATTTACCAATTGTGTAGGT+AGG | - | chr4.2:31145864-31145883 | MS.gene067551:intron | 35.0% | |
| CCTACTGCATTTGATAAACT+CGG | - | chr4.2:31143881-31143900 | MS.gene067551:CDS | 35.0% | |
| CCTGTGATATTAAAGTCAAC+AGG | + | chr4.2:31144372-31144391 | None:intergenic | 35.0% | |
| GAAGATCTAGATGAGCAAAT+TGG | - | chr4.2:31146039-31146058 | MS.gene067551:CDS | 35.0% | |
| GATGCATTTACCAATTGTGT+AGG | - | chr4.2:31145860-31145879 | MS.gene067551:intron | 35.0% | |
| GCTATAATAGGGAAAAACAC+AGG | + | chr4.2:31143524-31143543 | None:intergenic | 35.0% | |
| GTATCCCTTGATTCTTGTAT+AGG | - | chr4.2:31145248-31145267 | MS.gene067551:intron | 35.0% | |
| GTCATTGTGTTAAATGGAAC+TGG | - | chr4.2:31145326-31145345 | MS.gene067551:intron | 35.0% | |
| GTGATATTAAAGTCAACAGG+AGG | + | chr4.2:31144369-31144388 | None:intergenic | 35.0% | |
| GTTTATATGGTGTAACTGTG+TGG | - | chr4.2:31144219-31144238 | MS.gene067551:intron | 35.0% | |
| TATCATTCGGTAAAGAATGC+AGG | - | chr4.2:31141593-31141612 | MS.gene067551:CDS | 35.0% | |
| TATTGCTGATCCAAACACTA+AGG | - | chr4.2:31144495-31144514 | MS.gene067551:intron | 35.0% | |
| TGAAAAACTCAGACAAGCAT+TGG | + | chr4.2:31142833-31142852 | None:intergenic | 35.0% | |
| TGAATTTCAGCCTTAGTGTT+TGG | + | chr4.2:31144508-31144527 | None:intergenic | 35.0% | |
| TGACTTTAATATCACAGGTG+CGG | - | chr4.2:31144374-31144393 | MS.gene067551:intron | 35.0% | |
| TGCAGGGATAATTTACAAGT+CGG | - | chr4.2:31141610-31141629 | MS.gene067551:CDS | 35.0% | |
| TTATATGGTGTAACTGTGTG+GGG | - | chr4.2:31144221-31144240 | MS.gene067551:intron | 35.0% | |
| TTATCTCTTATTACGCAGGA+CGG | - | chr4.2:31142366-31142385 | MS.gene067551:intron | 35.0% | |
| TTGTGTTAAATGGAACTGGA+TGG | - | chr4.2:31145330-31145349 | MS.gene067551:intron | 35.0% | |
| ! | GTGCAAAAGAACTTTTGTTG+TGG | - | chr4.2:31145121-31145140 | MS.gene067551:intron | 35.0% |
| ! | GTTCTGAGTTCAATGACATT+GGG | - | chr4.2:31144866-31144885 | MS.gene067551:CDS | 35.0% |
| ! | TACCAGCACTGCAATTATTT+TGG | - | chr4.2:31142644-31142663 | MS.gene067551:intron | 35.0% |
| ! | TACTTTTGCTGCCATAATGA+GGG | - | chr4.2:31145947-31145966 | MS.gene067551:CDS | 35.0% |
| ! | TATTTCTCTGAAGAAGGGAA+TGG | - | chr4.2:31142718-31142737 | MS.gene067551:intron | 35.0% |
| !! | AAGAGAAGTATTCCTGTTGA+AGG | - | chr4.2:31142776-31142795 | MS.gene067551:intron | 35.0% |
| !! | AGTTGATAAGTAAAGGGTCA+AGG | + | chr4.2:31144697-31144716 | None:intergenic | 35.0% |
| !! | CCTGTTGACTTTAATATCAC+AGG | - | chr4.2:31144369-31144388 | MS.gene067551:intron | 35.0% |
| !! | GCTGTTTCTATAAGCTATCT+TGG | - | chr4.2:31141890-31141909 | MS.gene067551:intron | 35.0% |
| !! | TTAACTGTTGGCCTTGTTAT+TGG | - | chr4.2:31145187-31145206 | MS.gene067551:intron | 35.0% |
| !!! | ATTATCAGCAGTTGCTTTTG+GGG | - | chr4.2:31142688-31142707 | MS.gene067551:intron | 35.0% |
| !!! | GATTATCAGCAGTTGCTTTT+GGG | - | chr4.2:31142687-31142706 | MS.gene067551:intron | 35.0% |
| !!! | GTTTTAGTTTTGGTCCCTAA+TGG | - | chr4.2:31143173-31143192 | MS.gene067551:CDS | 35.0% |
| AACAAAGAGGGAACAGCTTA+TGG | + | chr4.2:31145562-31145581 | None:intergenic | 40.0% | |
| AACACATTTCCAGCTTTGCT+TGG | - | chr4.2:31144339-31144358 | MS.gene067551:intron | 40.0% | |
| AACTTGAGGATAGAAAGCTG+AGG | - | chr4.2:31145904-31145923 | MS.gene067551:intron | 40.0% | |
| AAGGTAGAACCTAACAACCA+TGG | + | chr4.2:31142514-31142533 | None:intergenic | 40.0% | |
| AATTGCATCGGAAAGCTCTA+TGG | + | chr4.2:31142456-31142475 | None:intergenic | 40.0% | |
| ACAAAGAGGGAACAGCTTAT+GGG | + | chr4.2:31145561-31145580 | None:intergenic | 40.0% | |
| ACATACATGTCCTGTCATCA+TGG | - | chr4.2:31144652-31144671 | MS.gene067551:CDS | 40.0% | |
| ACCAGCATTCTCAATTGCAT+CGG | + | chr4.2:31142468-31142487 | None:intergenic | 40.0% | |
| ACCTCTGTGGTAATTGAAGA+AGG | - | chr4.2:31143025-31143044 | MS.gene067551:CDS | 40.0% | |
| AGCATTGTCAAACTCCACAA+TGG | + | chr4.2:31143619-31143638 | None:intergenic | 40.0% | |
| AGCCAAAATAATTGCAGTGC+TGG | + | chr4.2:31142649-31142668 | None:intergenic | 40.0% | |
| AGTGTTAACCTTTGGTCCAA+CGG | + | chr4.2:31141668-31141687 | None:intergenic | 40.0% | |
| ATACGATTCGTTGCAAGACA+TGG | + | chr4.2:31144292-31144311 | None:intergenic | 40.0% | |
| ATATGATCCCTTCCTTCAAC+AGG | + | chr4.2:31142791-31142810 | None:intergenic | 40.0% | |
| ATCAAAGGGCCATACAGTAT+AGG | + | chr4.2:31142302-31142321 | None:intergenic | 40.0% | |
| ATGTCTTGCAACGAATCGTA+TGG | - | chr4.2:31144291-31144310 | MS.gene067551:intron | 40.0% | |
| CAACCAGGAAAAATCCATTG+TGG | - | chr4.2:31143602-31143621 | MS.gene067551:intron | 40.0% | |
| CAAGATATTGCGCTAATGAC+GGG | - | chr4.2:31143852-31143871 | MS.gene067551:CDS | 40.0% | |
| CAAGATTACAATCCACCTAG+CGG | - | chr4.2:31144132-31144151 | MS.gene067551:intron | 40.0% | |
| CATACATGTCCTGTCATCAT+GGG | - | chr4.2:31144653-31144672 | MS.gene067551:CDS | 40.0% | |
| CATGGGAACAAAGACATTTG+AGG | + | chr4.2:31144274-31144293 | None:intergenic | 40.0% | |
| CCAAACATGTTGTATGAGTC+TGG | + | chr4.2:31142025-31142044 | None:intergenic | 40.0% | |
| CCAGACTCATACAACATGTT+TGG | - | chr4.2:31142022-31142041 | MS.gene067551:intron | 40.0% | |
| CCGAGTTTATCAAATGCAGT+AGG | + | chr4.2:31143884-31143903 | None:intergenic | 40.0% | |
| CCTCTGTGGTAATTGAAGAA+GGG | - | chr4.2:31143026-31143045 | MS.gene067551:CDS | 40.0% | |
| CGTCAGTTGACTGTTAATAG+AGG | - | chr4.2:31144167-31144186 | MS.gene067551:intron | 40.0% | |
| CTCTTAAACACTCTCACAAG+TGG | + | chr4.2:31142080-31142099 | None:intergenic | 40.0% | |
| GAAGGAAGGGATCATATCAA+AGG | - | chr4.2:31142794-31142813 | MS.gene067551:intron | 40.0% | |
| GATTTGGGTCTTACACTTGA+AGG | - | chr4.2:31144410-31144429 | MS.gene067551:intron | 40.0% | |
| GCAGGGATAATTTACAAGTC+GGG | - | chr4.2:31141611-31141630 | MS.gene067551:CDS | 40.0% | |
| GCTGAAGCTATAGAGAAGAT+TGG | - | chr4.2:31142959-31142978 | MS.gene067551:intron | 40.0% | |
| GGACATGATCATTCAGATCT+GGG | + | chr4.2:31143502-31143521 | None:intergenic | 40.0% | |
| GGATTTCTCTGTGGAGATTT+GGG | - | chr4.2:31144395-31144414 | MS.gene067551:intron | 40.0% | |
| GGGTAGTGTTTGTTTGGATT+AGG | + | chr4.2:31141801-31141820 | None:intergenic | 40.0% | |
| GGTAATTGAAGAAGGGATGA+AGG | - | chr4.2:31143033-31143052 | MS.gene067551:CDS | 40.0% | |
| TACGATTCGTTGCAAGACAT+GGG | + | chr4.2:31144291-31144310 | None:intergenic | 40.0% | |
| TAGCAATGGACATCCTTCTT+CGG | + | chr4.2:31144785-31144804 | None:intergenic | 40.0% | |
| TATATGGTGTAACTGTGTGG+GGG | - | chr4.2:31144222-31144241 | MS.gene067551:intron | 40.0% | |
| TCAAAGGGCCATACAGTATA+GGG | + | chr4.2:31142301-31142320 | None:intergenic | 40.0% | |
| TCAAGAGGGTAGTGTTTGTT+TGG | + | chr4.2:31141807-31141826 | None:intergenic | 40.0% | |
| TCCTCCGCAATAATTAAGAG+CGG | + | chr4.2:31143723-31143742 | None:intergenic | 40.0% | |
| TGCTCCGCTCTTAATTATTG+CGG | - | chr4.2:31143716-31143735 | MS.gene067551:intron | 40.0% | |
| TTGCTCATCTAGATCTTCCA+TGG | + | chr4.2:31146037-31146056 | None:intergenic | 40.0% | |
| TTTACTTGCAACCTACAAGC+AGG | + | chr4.2:31142601-31142620 | None:intergenic | 40.0% | |
| TTTCATAAGCTATCCCAGAG+AGG | + | chr4.2:31142165-31142184 | None:intergenic | 40.0% | |
| ! | ATGAATGATTTGGCTGGTGA+TGG | - | chr4.2:31142621-31142640 | MS.gene067551:intron | 40.0% |
| ! | GAAGTATTCCTGTTGAAGGA+AGG | - | chr4.2:31142780-31142799 | MS.gene067551:intron | 40.0% |
| ! | TCTTTTGCACTAGATGGAGT+TGG | + | chr4.2:31145111-31145130 | None:intergenic | 40.0% |
| !! | ACTCCACAATGGATTTTTCC+TGG | + | chr4.2:31143608-31143627 | None:intergenic | 40.0% |
| !! | AGGATGATGGGAAACAAAGA+GGG | + | chr4.2:31145574-31145593 | None:intergenic | 40.0% |
| !! | CACAATGGATTTTTCCTGGT+TGG | + | chr4.2:31143604-31143623 | None:intergenic | 40.0% |
| !! | CACTTGTGAGAGTGTTTAAG+AGG | - | chr4.2:31142078-31142097 | MS.gene067551:intron | 40.0% |
| !! | CTACTTTTGCTGCCATAATG+AGG | - | chr4.2:31145946-31145965 | MS.gene067551:CDS | 40.0% |
| !! | GCAAATTGGTGCTGATATTG+TGG | - | chr4.2:31146053-31146072 | MS.gene067551:CDS | 40.0% |
| !! | GGATTATCAGCAGTTGCTTT+TGG | - | chr4.2:31142686-31142705 | MS.gene067551:intron | 40.0% |
| !! | GGTTCTGAGTTCAATGACAT+TGG | - | chr4.2:31144865-31144884 | MS.gene067551:CDS | 40.0% |
| !! | TAGGATGATGGGAAACAAAG+AGG | + | chr4.2:31145575-31145594 | None:intergenic | 40.0% |
| !! | TGCATAGCTTTTTCCAGCAA+AGG | + | chr4.2:31143690-31143709 | None:intergenic | 40.0% |
| !!! | GGCCTTGTTATTGGTTTTGT+TGG | - | chr4.2:31145196-31145215 | MS.gene067551:intron | 40.0% |
| AACATTCTTGCGTGAGGGTT+TGG | - | chr4.2:31144969-31144988 | MS.gene067551:CDS | 45.0% | |
| AAGCCTAGTATGAAGGAAGC+TGG | + | chr4.2:31143919-31143938 | None:intergenic | 45.0% | |
| ACACACTGAGCTAGAACTTG+AGG | - | chr4.2:31145890-31145909 | MS.gene067551:intron | 45.0% | |
| ACCTGCCATAAAGAACTCCA+TGG | - | chr4.2:31146017-31146036 | MS.gene067551:CDS | 45.0% | |
| ACGTACTGAAACAATCCGCT+AGG | + | chr4.2:31144150-31144169 | None:intergenic | 45.0% | |
| ACTAGCAACATTCTTGCGTG+AGG | - | chr4.2:31144963-31144982 | MS.gene067551:CDS | 45.0% | |
| AGAATTGCGAAACTCACTGG+CGG | - | chr4.2:31144601-31144620 | MS.gene067551:CDS | 45.0% | |
| AGAGAGGAGCTTGTCGAAAT+AGG | + | chr4.2:31142149-31142168 | None:intergenic | 45.0% | |
| AGATGATGAGGATGACTCGA+TGG | + | chr4.2:31143002-31143021 | None:intergenic | 45.0% | |
| ATTCAACCAAGGACCGAAGA+AGG | - | chr4.2:31144769-31144788 | MS.gene067551:intron | 45.0% | |
| ATTTCGACAAGCTCCTCTCT+GGG | - | chr4.2:31142149-31142168 | MS.gene067551:intron | 45.0% | |
| CACAGAGGTTTCAGATGATG+AGG | + | chr4.2:31143014-31143033 | None:intergenic | 45.0% | |
| CAGGAACAAGTCCCTCATTA+TGG | + | chr4.2:31145961-31145980 | None:intergenic | 45.0% | |
| CAGGTATCAAGTCCAAAAGG+TGG | + | chr4.2:31146002-31146021 | None:intergenic | 45.0% | |
| CCCTTCTTCAATTACCACAG+AGG | + | chr4.2:31143029-31143048 | None:intergenic | 45.0% | |
| CGGATTTCTCTGTGGAGATT+TGG | - | chr4.2:31144394-31144413 | MS.gene067551:intron | 45.0% | |
| CTAATTCAAGAGGTCGACCA+TGG | - | chr4.2:31142494-31142513 | MS.gene067551:intron | 45.0% | |
| CTAGCAACATTCTTGCGTGA+GGG | - | chr4.2:31144964-31144983 | MS.gene067551:CDS | 45.0% | |
| CTTTCATTGCAGTACCAAGC+TGG | + | chr4.2:31144448-31144467 | None:intergenic | 45.0% | |
| GAGAGAATTGCGAAACTCAC+TGG | - | chr4.2:31144598-31144617 | MS.gene067551:CDS | 45.0% | |
| GAGAGGAGCTTGTCGAAATA+GGG | + | chr4.2:31142148-31142167 | None:intergenic | 45.0% | |
| GCTGGAAATGACGAGTATGT+TGG | - | chr4.2:31142926-31142945 | MS.gene067551:intron | 45.0% | |
| GCTGTAAAATGTCCAGGACT+CGG | - | chr4.2:31143807-31143826 | MS.gene067551:CDS | 45.0% | |
| GGATAGAAAGCTGAGGATTG+AGG | - | chr4.2:31145911-31145930 | MS.gene067551:intron | 45.0% | |
| GGGACATGATCATTCAGATC+TGG | + | chr4.2:31143503-31143522 | None:intergenic | 45.0% | |
| GGGTCAAGGTGATCAGAATA+AGG | + | chr4.2:31144683-31144702 | None:intergenic | 45.0% | |
| GTCATTTCCAGCAGAAATCG+AGG | + | chr4.2:31142918-31142937 | None:intergenic | 45.0% | |
| GTCCAAAAGGTGGACATATG+TGG | + | chr4.2:31145992-31146011 | None:intergenic | 45.0% | |
| GTCGACCTCTTGAATTAGCA+TGG | + | chr4.2:31142492-31142511 | None:intergenic | 45.0% | |
| GTTGCAGCTGTAAAATGTCC+AGG | - | chr4.2:31143801-31143820 | MS.gene067551:CDS | 45.0% | |
| TACTGAAACAATCCGCTAGG+TGG | + | chr4.2:31144147-31144166 | None:intergenic | 45.0% | |
| TATTTCGACAAGCTCCTCTC+TGG | - | chr4.2:31142148-31142167 | MS.gene067551:intron | 45.0% | |
| TCCATGGAGTTCTTTATGGC+AGG | + | chr4.2:31146021-31146040 | None:intergenic | 45.0% | |
| TCCGATGCAATTGAGAATGC+TGG | - | chr4.2:31142464-31142483 | MS.gene067551:intron | 45.0% | |
| TCCGCTCTTAATTATTGCGG+AGG | - | chr4.2:31143719-31143738 | MS.gene067551:intron | 45.0% | |
| TCCTTACTTCATCACCAACC+AGG | - | chr4.2:31143587-31143606 | MS.gene067551:intron | 45.0% | |
| TCGGAGAAACCCACAATTTG+TGG | - | chr4.2:31141549-31141568 | MS.gene067551:CDS | 45.0% | |
| TGGCAGGTATCAAGTCCAAA+AGG | + | chr4.2:31146005-31146024 | None:intergenic | 45.0% | |
| TGGCGGTATAGCCGTTATAA+AGG | - | chr4.2:31144618-31144637 | MS.gene067551:CDS | 45.0% | |
| TGTGCACCTACCTACACAAT+TGG | + | chr4.2:31145873-31145892 | None:intergenic | 45.0% | |
| TTGCTCGCACCACAAATTGT+GGG | + | chr4.2:31141561-31141580 | None:intergenic | 45.0% | |
| TTGGACAGTATGGCTGTCTT+GGG | - | chr4.2:31144060-31144079 | MS.gene067551:intron | 45.0% | |
| ! | CATAATGAGGGACTTGTTCC+TGG | - | chr4.2:31145959-31145978 | MS.gene067551:CDS | 45.0% |
| ! | CTCATCATCTGAAACCTCTG+TGG | - | chr4.2:31143012-31143031 | MS.gene067551:CDS | 45.0% |
| ! | TCTCTGAGAGCTTTCTCGAA+TGG | + | chr4.2:31144582-31144601 | None:intergenic | 45.0% |
| ! | TGCCACATATGTCCACCTTT+TGG | - | chr4.2:31145987-31146006 | MS.gene067551:CDS | 45.0% |
| !! | TCCTGGTTGGTGATGAAGTA+AGG | + | chr4.2:31143591-31143610 | None:intergenic | 45.0% |
| !! | TGGTGCCATGCTAATTCAAG+AGG | - | chr4.2:31142484-31142503 | MS.gene067551:intron | 45.0% |
| !! | AACTATTATTAAAATTATTA+GGG | + | chr4.2:31143454-31143473 | None:intergenic | 5.0% |
| !!! | AAAAAAAATTATTTTGTTTT+TGG | + | chr4.2:31143348-31143367 | None:intergenic | 5.0% |
| AAATGTCCAGGACTCGGAGA+TGG | - | chr4.2:31143813-31143832 | MS.gene067551:CDS | 50.0% | |
| AGAGGTCGACCATGGTTGTT+AGG | - | chr4.2:31142502-31142521 | MS.gene067551:intron | 50.0% | |
| CATGTTGTATGAGTCTGGGC+CGG | + | chr4.2:31142020-31142039 | None:intergenic | 50.0% | |
| CTCTCTTACCGTTGGACCAA+AGG | - | chr4.2:31141657-31141676 | MS.gene067551:intron | 50.0% | |
| CTGCCAGCTTCCTTCATACT+AGG | - | chr4.2:31143913-31143932 | MS.gene067551:CDS | 50.0% | |
| CTTGCTCGCACCACAAATTG+TGG | + | chr4.2:31141562-31141581 | None:intergenic | 50.0% | |
| GATGCTGTCTCTCTTACCGT+TGG | - | chr4.2:31141649-31141668 | MS.gene067551:intron | 50.0% | |
| GGCTCGCGCTATGATAAATC+TGG | - | chr4.2:31142665-31142684 | MS.gene067551:intron | 50.0% | |
| GGTACAACATCAGACCAGCT+TGG | - | chr4.2:31144431-31144450 | MS.gene067551:intron | 50.0% | |
| GTTGGACAGTATGGCTGTCT+TGG | - | chr4.2:31144059-31144078 | MS.gene067551:intron | 50.0% | |
| TAAGGACAGCCCATGATGAC+AGG | + | chr4.2:31144665-31144684 | None:intergenic | 50.0% | |
| TTCTTTCCATCTCCGAGTCC+TGG | + | chr4.2:31143822-31143841 | None:intergenic | 50.0% | |
| ! | AATGAGGGACTTGTTCCTGG+AGG | - | chr4.2:31145962-31145981 | MS.gene067551:CDS | 50.0% |
| ! | ATGAGGGACTTGTTCCTGGA+GGG | - | chr4.2:31145963-31145982 | MS.gene067551:CDS | 50.0% |
| AGGCTACAGCTGCACAAGGT+GGG | + | chr4.2:31142898-31142917 | None:intergenic | 55.0% | |
| ATCGAGGCTACAGCTGCACA+AGG | + | chr4.2:31142902-31142921 | None:intergenic | 55.0% | |
| CACAGGTGCGGATTTCTCTG+TGG | - | chr4.2:31144386-31144405 | MS.gene067551:intron | 55.0% | |
| GCTGTAGCCTCGATTTCTGC+TGG | - | chr4.2:31142908-31142927 | MS.gene067551:intron | 55.0% | |
| GGACATCCTTCTTCGGTCCT+TGG | + | chr4.2:31144778-31144797 | None:intergenic | 55.0% | |
| GGACGTCACTGCACAAGTGT+TGG | - | chr4.2:31143740-31143759 | MS.gene067551:intron | 55.0% | |
| GGAGGTCAACCAAGCAAAGC+TGG | + | chr4.2:31144351-31144370 | None:intergenic | 55.0% | |
| TGTATGAGTCTGGGCCGGTT+TGG | + | chr4.2:31142015-31142034 | None:intergenic | 55.0% | |
| ! | TGAGGGACTTGTTCCTGGAG+GGG | - | chr4.2:31145964-31145983 | MS.gene067551:CDS | 55.0% |
| GACATATGTGGCACCCCTCC+AGG | + | chr4.2:31145980-31145999 | None:intergenic | 60.0% | |
| GAGGCTACAGCTGCACAAGG+TGG | + | chr4.2:31142899-31142918 | None:intergenic | 60.0% | |
| GGCTACAGCTGCACAAGGTG+GGG | + | chr4.2:31142897-31142916 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 31141541 | 31146080 | 31141541 | ID=MS.gene067551 |
| chr4.2 | mRNA | 31141541 | 31146080 | 31141541 | ID=MS.gene067551.t1;Parent=MS.gene067551 |
| chr4.2 | exon | 31145943 | 31146080 | 31145943 | ID=MS.gene067551.t1.exon1;Parent=MS.gene067551.t1 |
| chr4.2 | CDS | 31145943 | 31146080 | 31145943 | ID=cds.MS.gene067551.t1;Parent=MS.gene067551.t1 |
| chr4.2 | exon | 31144952 | 31145012 | 31144952 | ID=MS.gene067551.t1.exon2;Parent=MS.gene067551.t1 |
| chr4.2 | CDS | 31144952 | 31145012 | 31144952 | ID=cds.MS.gene067551.t1;Parent=MS.gene067551.t1 |
| chr4.2 | exon | 31144806 | 31144922 | 31144806 | ID=MS.gene067551.t1.exon3;Parent=MS.gene067551.t1 |
| chr4.2 | CDS | 31144806 | 31144922 | 31144806 | ID=cds.MS.gene067551.t1;Parent=MS.gene067551.t1 |
| chr4.2 | exon | 31144567 | 31144712 | 31144567 | ID=MS.gene067551.t1.exon4;Parent=MS.gene067551.t1 |
| chr4.2 | CDS | 31144567 | 31144712 | 31144567 | ID=cds.MS.gene067551.t1;Parent=MS.gene067551.t1 |
| chr4.2 | exon | 31143744 | 31144054 | 31143744 | ID=MS.gene067551.t1.exon5;Parent=MS.gene067551.t1 |
| chr4.2 | CDS | 31143744 | 31144054 | 31143744 | ID=cds.MS.gene067551.t1;Parent=MS.gene067551.t1 |
| chr4.2 | exon | 31143155 | 31143230 | 31143155 | ID=MS.gene067551.t1.exon6;Parent=MS.gene067551.t1 |
| chr4.2 | CDS | 31143155 | 31143230 | 31143155 | ID=cds.MS.gene067551.t1;Parent=MS.gene067551.t1 |
| chr4.2 | exon | 31142962 | 31143104 | 31142962 | ID=MS.gene067551.t1.exon7;Parent=MS.gene067551.t1 |
| chr4.2 | CDS | 31142962 | 31143104 | 31142962 | ID=cds.MS.gene067551.t1;Parent=MS.gene067551.t1 |
| chr4.2 | exon | 31141541 | 31141637 | 31141541 | ID=MS.gene067551.t1.exon8;Parent=MS.gene067551.t1 |
| chr4.2 | CDS | 31141541 | 31141637 | 31141541 | ID=cds.MS.gene067551.t1;Parent=MS.gene067551.t1 |
| Gene Sequence |
| Protein sequence |
