AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067600.t1 MTR_8g071070 94.444 90 5 0 1 90 297 386 4.83e-54 176
MS.gene067600.t1 MTR_0009s0240 87.778 90 11 0 1 90 287 376 3.41e-48 160
MS.gene067600.t1 MTR_8g066610 51.111 90 39 1 1 90 304 388 1.58e-28 108
MS.gene067600.t1 MTR_6g005600 49.485 97 39 2 4 90 287 383 2.54e-27 105
MS.gene067600.t1 MTR_4g485590 51.111 90 39 1 1 90 274 358 9.26e-27 102
MS.gene067600.t1 MTR_6g488280 49.485 97 42 1 1 90 283 379 1.15e-26 103
MS.gene067600.t1 MTR_0428s0010 49.485 97 42 1 1 90 283 379 1.15e-26 103
MS.gene067600.t1 MTR_7g102550 50.000 90 43 1 1 90 302 389 1.57e-26 102
MS.gene067600.t1 MTR_5g045970 49.412 85 41 1 4 88 311 393 2.19e-26 102
MS.gene067600.t1 MTR_6g033675 50.000 90 44 1 1 90 292 380 5.36e-26 101
MS.gene067600.t1 MTR_0184s0030 48.421 95 41 1 4 90 289 383 7.08e-26 100
MS.gene067600.t1 MTR_6g023665 48.454 97 43 1 1 90 290 386 8.49e-26 100
MS.gene067600.t1 MTR_7g102450 50.000 88 41 2 4 90 290 375 8.83e-26 100
MS.gene067600.t1 MTR_6g033625 51.087 92 40 2 1 90 292 380 9.12e-26 100
MS.gene067600.t1 MTR_7g102460 50.000 88 40 2 4 90 306 390 1.20e-25 100
MS.gene067600.t1 MTR_0078s0010 48.454 97 43 2 1 90 285 381 2.38e-25 99.4
MS.gene067600.t1 MTR_7g102490 51.136 88 39 2 4 90 308 392 2.38e-25 99.8
MS.gene067600.t1 MTR_0184s0040 51.064 94 39 2 4 90 303 396 3.82e-25 99.0
MS.gene067600.t1 MTR_0078s0190 51.064 94 39 2 4 90 303 396 3.82e-25 99.0
MS.gene067600.t1 MTR_3g009510 47.000 100 43 2 1 90 292 391 5.45e-25 98.6
MS.gene067600.t1 MTR_8g006710 47.423 97 44 1 1 90 284 380 5.67e-25 98.6
MS.gene067600.t1 MTR_4g024020 48.864 88 41 2 4 90 308 392 6.71e-25 98.6
MS.gene067600.t1 MTR_5g045960 48.276 87 44 1 4 90 304 389 8.48e-25 98.2
MS.gene067600.t1 MTR_7g046490 45.833 96 43 1 4 90 284 379 8.89e-25 97.8
MS.gene067600.t1 MTR_0078s0060 48.936 94 41 2 4 90 287 380 9.20e-25 97.8
MS.gene067600.t1 MTR_7g117170 46.875 96 42 1 4 90 296 391 1.26e-24 97.4
MS.gene067600.t1 MTR_2g059240 54.545 88 32 2 3 90 307 386 1.41e-24 97.4
MS.gene067600.t1 MTR_6g033725 47.778 90 46 1 1 90 289 377 1.55e-24 97.4
MS.gene067600.t1 MTR_6g033660 50.000 90 44 1 1 90 291 379 2.11e-24 97.1
MS.gene067600.t1 MTR_8g006730 47.475 99 41 2 1 90 285 381 3.11e-24 96.3
MS.gene067600.t1 MTR_4g485630 50.000 94 39 3 1 90 294 383 3.17e-24 96.3
MS.gene067600.t1 MTR_8g012635 45.918 98 42 2 4 90 290 387 4.32e-24 95.9
MS.gene067600.t1 MTR_2g040530 46.316 95 45 3 1 90 286 379 5.92e-24 95.5
MS.gene067600.t1 MTR_6g033615 48.913 92 42 2 1 90 278 366 5.99e-24 95.5
MS.gene067600.t1 MTR_3g009490 48.515 101 40 2 1 90 4 103 6.07e-24 91.3
MS.gene067600.t1 MTR_1g062380 44.828 87 46 1 4 90 312 396 8.34e-24 95.5
MS.gene067600.t1 MTR_1g019510 44.898 98 46 1 1 90 282 379 1.40e-23 94.7
MS.gene067600.t1 MTR_4g008630 48.387 93 45 2 1 90 284 376 1.42e-23 94.7
MS.gene067600.t1 MTR_0536s0020 48.913 92 41 3 4 90 295 385 1.78e-23 94.4
MS.gene067600.t1 MTR_7g102520 44.318 88 47 1 1 88 306 391 2.13e-23 94.4
MS.gene067600.t1 MTR_8g009840 46.939 98 41 1 4 90 346 443 2.37e-23 94.4
MS.gene067600.t1 MTR_8g008970 45.361 97 46 1 1 90 284 380 2.37e-23 94.4
MS.gene067600.t1 MTR_8g008970 54.386 57 26 0 34 90 648 704 1.29e-17 77.8
MS.gene067600.t1 MTR_4g117960 51.087 92 39 3 4 90 296 386 2.76e-23 94.0
MS.gene067600.t1 MTR_7g047030 45.745 94 44 1 4 90 288 381 2.92e-23 93.6
MS.gene067600.t1 MTR_7g047270 45.745 94 44 1 4 90 288 381 2.92e-23 93.6
MS.gene067600.t1 MTR_8g068360 55.556 81 28 2 4 81 299 374 3.00e-23 93.6
MS.gene067600.t1 MTR_6g035265 45.652 92 45 2 4 90 289 380 4.06e-23 93.2
MS.gene067600.t1 MTR_8g009055 45.833 96 43 1 4 90 287 382 4.39e-23 93.2
MS.gene067600.t1 MTR_4g485620 44.444 90 45 2 1 90 281 365 6.01e-23 92.8
MS.gene067600.t1 MTR_7g117405 45.455 88 41 2 4 90 304 385 7.10e-23 92.8
MS.gene067600.t1 MTR_1g029540 45.161 93 48 1 1 90 281 373 8.34e-23 92.4
MS.gene067600.t1 MTR_2g046820 45.263 95 46 3 1 90 284 377 8.35e-23 92.4
MS.gene067600.t1 MTR_7g102560 44.828 87 46 1 4 90 303 387 8.47e-23 92.4
MS.gene067600.t1 MTR_4g117950 49.438 89 41 2 4 90 282 368 1.13e-22 92.0
MS.gene067600.t1 MTR_5g087620 50.538 93 43 2 1 90 312 404 1.21e-22 92.0
MS.gene067600.t1 MTR_8g006270 41.414 99 49 1 1 90 281 379 1.47e-22 91.7
MS.gene067600.t1 MTR_8g009050 44.792 96 44 1 4 90 287 382 1.73e-22 91.7
MS.gene067600.t1 MTR_8g009067 44.681 94 45 1 4 90 287 380 1.73e-22 91.7
MS.gene067600.t1 MTR_5g027210 45.545 101 44 3 4 93 305 405 1.81e-22 91.7
MS.gene067600.t1 MTR_5g070040 44.565 92 46 3 1 90 295 383 2.44e-22 91.3
MS.gene067600.t1 MTR_8g090095 45.745 94 43 3 4 90 301 393 2.45e-22 91.3
MS.gene067600.t1 MTR_8g077590 44.086 93 46 1 4 90 290 382 2.90e-22 90.9
MS.gene067600.t1 MTR_8g027885 40.816 98 49 1 2 90 291 388 3.12e-22 90.9
MS.gene067600.t1 MTR_8g465670 42.708 96 46 1 4 90 286 381 3.50e-22 90.9
MS.gene067600.t1 MTR_0536s0010 46.667 90 42 3 4 90 296 382 3.55e-22 90.9
MS.gene067600.t1 MTR_8g009073 44.681 94 45 1 4 90 287 380 3.98e-22 90.5
MS.gene067600.t1 MTR_8g012745 43.750 96 45 1 4 90 290 385 4.05e-22 90.5
MS.gene067600.t1 MTR_4g118000 47.191 89 43 2 4 90 286 372 5.18e-22 90.1
MS.gene067600.t1 MTR_1g019520 44.330 97 46 1 2 90 32 128 5.92e-22 87.0
MS.gene067600.t1 MTR_2g035040 45.556 90 46 2 4 90 203 292 7.29e-22 89.4
MS.gene067600.t1 MTR_2g046750 44.792 96 45 3 1 90 287 380 7.92e-22 89.7
MS.gene067600.t1 MTR_8g012730 42.857 98 45 1 4 90 127 224 1.10e-21 87.8
MS.gene067600.t1 MTR_8g006260 45.263 95 44 3 4 90 291 385 1.30e-21 89.0
MS.gene067600.t1 MTR_4g485640 45.652 92 46 2 1 90 484 573 1.42e-21 89.4
MS.gene067600.t1 MTR_8g068330 52.564 78 35 1 4 81 296 371 1.59e-21 89.0
MS.gene067600.t1 MTR_8g027870 39.796 98 50 1 2 90 291 388 2.03e-21 88.6
MS.gene067600.t1 MTR_8g012630 41.837 98 46 1 4 90 234 331 2.24e-21 88.2
MS.gene067600.t1 MTR_8g009067 43.299 97 48 1 1 90 166 262 2.37e-21 87.4
MS.gene067600.t1 MTR_8g009073 43.299 97 48 1 1 90 155 251 4.00e-21 86.7
MS.gene067600.t1 MTR_4g117980 44.444 90 47 2 4 90 298 387 5.30e-21 87.4
MS.gene067600.t1 MTR_8g466240 51.087 92 38 2 1 90 286 372 6.53e-21 87.0
MS.gene067600.t1 MTR_2g098430 46.392 97 42 3 1 90 294 387 8.83e-21 86.7
MS.gene067600.t1 MTR_6g035185 46.739 92 44 2 4 90 298 389 9.68e-21 86.7
MS.gene067600.t1 MTR_5g090620 43.434 99 46 3 1 90 288 385 1.60e-20 85.9
MS.gene067600.t1 MTR_8g074550 41.071 112 44 4 1 90 289 400 1.61e-20 86.3
MS.gene067600.t1 MTR_8g068340 53.086 81 30 2 4 81 300 375 1.67e-20 85.9
MS.gene067600.t1 MTR_7g012120 48.889 90 43 2 4 90 300 389 2.55e-20 85.5
MS.gene067600.t1 MTR_4g117890 45.055 91 46 2 4 90 290 380 2.69e-20 85.5
MS.gene067600.t1 MTR_8g012650 38.776 98 49 1 4 90 290 387 2.73e-20 85.5
MS.gene067600.t1 MTR_8g009063 45.833 96 43 1 4 90 294 389 2.96e-20 85.5
MS.gene067600.t1 MTR_8g006220 35.537 121 57 2 4 103 285 405 3.22e-20 85.1
MS.gene067600.t1 MTR_6g014300 35.780 109 63 3 4 112 304 405 3.76e-20 85.1
MS.gene067600.t1 MTR_2g035020 45.556 90 46 2 4 90 298 387 3.87e-20 85.1
MS.gene067600.t1 MTR_5g090580 41.837 98 48 2 1 90 288 384 4.79e-20 84.7
MS.gene067600.t1 MTR_5g098930 38.776 98 51 2 1 90 281 377 6.47e-20 84.3
MS.gene067600.t1 MTR_5g019580 40.594 101 49 1 1 90 316 416 1.06e-19 84.0
MS.gene067600.t1 MTR_8g008990 41.837 98 46 2 4 90 287 384 1.12e-19 83.6
MS.gene067600.t1 MTR_5g090700 41.837 98 48 2 1 90 290 386 1.14e-19 83.6
MS.gene067600.t1 MTR_5g029800 46.667 90 45 2 4 90 294 383 1.61e-19 83.2
MS.gene067600.t1 MTR_5g067170 45.556 90 46 2 4 90 296 385 1.96e-19 83.2
MS.gene067600.t1 MTR_5g019580 40.594 101 49 1 1 90 292 392 2.75e-19 82.4
MS.gene067600.t1 MTR_5g090660 44.211 95 44 3 4 90 289 382 3.25e-19 82.4
MS.gene067600.t1 MTR_7g071040 43.820 89 44 3 4 90 312 396 4.03e-19 82.0
MS.gene067600.t1 MTR_4g082820 37.705 122 60 3 1 109 289 407 8.66e-19 81.3
MS.gene067600.t1 MTR_5g090670 42.857 98 47 3 1 90 290 386 8.80e-19 81.3
MS.gene067600.t1 MTR_5g090610 39.796 98 50 2 1 90 274 370 9.41e-19 80.9
MS.gene067600.t1 MTR_4g082810 40.336 119 64 3 1 113 292 409 1.48e-18 80.5
MS.gene067600.t1 MTR_4g108250 42.697 89 45 3 4 90 309 393 1.60e-18 80.5
MS.gene067600.t1 MTR_2g008225 46.429 84 39 1 1 84 299 376 1.68e-18 80.5
MS.gene067600.t1 MTR_2g034990 42.222 90 49 2 4 90 298 387 2.04e-18 80.1
MS.gene067600.t1 MTR_3g008010 33.929 112 67 3 1 112 313 417 3.02e-18 79.7
MS.gene067600.t1 MTR_6g014050 35.780 109 63 3 4 112 319 420 3.37e-18 79.3
MS.gene067600.t1 MTR_7g070930 42.697 89 45 3 4 90 309 393 3.39e-18 79.3
MS.gene067600.t1 MTR_5g070090 41.304 92 42 4 1 90 295 376 4.77e-18 79.0
MS.gene067600.t1 MTR_7g070910 41.573 89 46 3 4 90 306 390 5.14e-18 79.0
MS.gene067600.t1 MTR_6g013440 34.862 109 64 3 4 112 319 420 7.29e-18 78.6
MS.gene067600.t1 MTR_2g008220 46.429 84 39 1 1 84 298 375 8.39e-18 78.2
MS.gene067600.t1 MTR_6g014310 34.862 109 64 3 4 112 319 420 9.29e-18 78.2
MS.gene067600.t1 MTR_7g070740 42.697 89 45 3 4 90 305 389 9.58e-18 78.2
MS.gene067600.t1 MTR_0536s0030 50.685 73 33 2 20 90 186 257 9.60e-18 77.8
MS.gene067600.t1 MTR_2g008226 44.048 84 41 1 1 84 303 380 1.05e-17 78.2
MS.gene067600.t1 MTR_5g058320 34.545 110 65 3 4 113 303 405 1.06e-17 78.2
MS.gene067600.t1 MTR_5g004940 38.710 93 53 3 1 92 224 313 1.08e-17 77.8
MS.gene067600.t1 MTR_7g470610 40.449 89 47 2 4 90 162 246 1.27e-17 76.6
MS.gene067600.t1 MTR_7g070583 40.449 89 47 2 4 90 162 246 1.27e-17 76.6
MS.gene067600.t1 MTR_7g070780 40.449 89 47 2 4 90 305 389 1.37e-17 77.8
MS.gene067600.t1 MTR_2g008210 37.615 109 63 4 4 112 312 415 1.41e-17 77.8
MS.gene067600.t1 MTR_0288s0020 34.545 110 65 3 4 113 299 401 1.48e-17 77.8
MS.gene067600.t1 MTR_7g011470 40.230 87 47 2 4 90 304 385 1.50e-17 77.8
MS.gene067600.t1 MTR_8g032950 42.857 91 48 2 4 90 296 386 1.50e-17 77.8
MS.gene067600.t1 MTR_5g090630 39.796 98 50 2 1 90 279 375 1.53e-17 77.4
MS.gene067600.t1 MTR_6g013450 33.636 110 66 3 4 113 319 421 1.64e-17 77.4
MS.gene067600.t1 MTR_7g011470 40.230 87 47 2 4 90 300 381 1.80e-17 77.4
MS.gene067600.t1 MTR_4g031800 40.230 87 46 2 1 85 291 373 1.85e-17 77.4
MS.gene067600.t1 MTR_6g014187 35.780 109 63 3 4 112 318 419 2.01e-17 77.4
MS.gene067600.t1 MTR_7g070610 40.449 89 47 2 4 90 307 391 2.17e-17 77.0
MS.gene067600.t1 MTR_3g479520 33.929 112 68 4 1 112 317 422 2.17e-17 77.0
MS.gene067600.t1 MTR_8g059425 33.028 109 66 3 4 112 316 417 2.53e-17 77.0
MS.gene067600.t1 MTR_7g070810 40.449 89 47 3 4 90 295 379 3.30e-17 76.6
MS.gene067600.t1 MTR_5g016660 43.820 89 44 3 4 90 306 390 3.51e-17 76.6
MS.gene067600.t1 MTR_6g014200 37.273 110 60 4 4 112 315 416 3.58e-17 76.6
MS.gene067600.t1 MTR_4g128690 43.182 88 41 2 1 88 291 369 3.69e-17 76.6
MS.gene067600.t1 MTR_7g070660 39.326 89 48 2 4 90 300 384 4.03e-17 76.3
MS.gene067600.t1 MTR_6g014270 33.945 109 65 3 4 112 317 418 4.54e-17 76.3
MS.gene067600.t1 MTR_6g036650 44.048 84 41 1 1 84 304 381 4.55e-17 76.3
MS.gene067600.t1 MTR_6g014220 33.929 112 67 3 1 112 313 417 4.71e-17 76.3
MS.gene067600.t1 MTR_6g013990 37.931 87 49 2 4 90 316 397 5.20e-17 76.3
MS.gene067600.t1 MTR_4g079270 46.914 81 40 1 2 82 287 364 5.45e-17 75.9
MS.gene067600.t1 MTR_6g014150 33.945 109 65 3 4 112 315 416 5.84e-17 75.9
MS.gene067600.t1 MTR_7g071050 42.697 89 45 3 4 90 261 345 6.16e-17 75.9
MS.gene067600.t1 MTR_2g046620 44.048 84 41 1 1 84 295 372 6.35e-17 75.9
MS.gene067600.t1 MTR_5g031860 38.614 101 52 4 7 103 313 407 6.71e-17 75.9
MS.gene067600.t1 MTR_4g123553 41.667 84 43 1 1 84 294 371 8.01e-17 75.5
MS.gene067600.t1 MTR_7g070800 41.573 89 46 3 4 90 297 381 8.43e-17 75.5
MS.gene067600.t1 MTR_6g014250 33.028 109 66 3 4 112 316 417 1.05e-16 75.1
MS.gene067600.t1 MTR_1g107315 44.706 85 44 2 4 88 299 380 1.16e-16 75.1
MS.gene067600.t1 MTR_6g013920 33.636 110 66 3 4 113 317 419 1.42e-16 74.7
MS.gene067600.t1 MTR_7g055710 39.326 89 48 2 4 90 305 389 1.72e-16 74.7
MS.gene067600.t1 MTR_4g128720 48.235 85 35 3 1 85 294 369 1.91e-16 74.3
MS.gene067600.t1 MTR_5g090600 40.000 90 44 2 1 90 284 363 2.15e-16 74.3
MS.gene067600.t1 MTR_4g064987 42.045 88 49 2 1 88 278 363 2.45e-16 74.3
MS.gene067600.t1 MTR_4g064987 42.045 88 49 2 1 88 284 369 2.60e-16 73.9
MS.gene067600.t1 MTR_6g013900 32.727 110 67 3 4 113 317 419 2.64e-16 73.9
MS.gene067600.t1 MTR_5g464810 34.513 113 67 3 1 113 313 418 2.96e-16 73.9
MS.gene067600.t1 MTR_5g064240 34.513 113 67 3 1 113 313 418 2.96e-16 73.9
MS.gene067600.t1 MTR_1g107350 43.529 85 45 2 4 88 299 380 3.52e-16 73.6
MS.gene067600.t1 MTR_6g014040 33.028 109 66 3 4 112 319 420 3.94e-16 73.6
MS.gene067600.t1 MTR_8g056740 38.889 90 49 3 1 90 195 278 4.46e-16 73.2
MS.gene067600.t1 MTR_3g069690 43.529 85 45 2 4 88 285 366 4.87e-16 73.2
MS.gene067600.t1 MTR_3g435310 44.444 81 39 1 4 84 256 330 6.75e-16 72.8
MS.gene067600.t1 MTR_7g070940 38.202 89 49 2 4 90 294 378 7.20e-16 72.8
MS.gene067600.t1 MTR_8g044140 40.449 89 48 2 4 90 270 355 7.22e-16 72.8
MS.gene067600.t1 MTR_1g107365 41.176 85 38 2 4 88 333 405 8.15e-16 72.8
MS.gene067600.t1 MTR_5g040030 35.955 89 52 2 4 90 309 394 8.56e-16 72.8
MS.gene067600.t1 MTR_5g016480 39.362 94 54 2 1 94 300 390 8.61e-16 72.8
MS.gene067600.t1 MTR_4g079250 45.679 81 41 1 2 82 287 364 8.76e-16 72.4
MS.gene067600.t1 MTR_4g094220 32.143 112 70 4 1 112 313 418 9.33e-16 72.4
MS.gene067600.t1 MTR_6g014170 33.028 109 66 3 4 112 300 401 1.05e-15 72.4
MS.gene067600.t1 MTR_1g040310 40.449 89 46 3 4 90 307 390 1.05e-15 72.4
MS.gene067600.t1 MTR_6g042310 43.210 81 40 1 4 84 300 374 1.34e-15 72.0
MS.gene067600.t1 MTR_4g077960 42.857 84 42 1 1 84 271 348 1.51e-15 72.0
MS.gene067600.t1 MTR_5g464760 32.727 110 67 3 4 113 318 420 1.53e-15 72.0
MS.gene067600.t1 MTR_7g013220 43.678 87 41 4 4 90 291 369 1.57e-15 72.0
MS.gene067600.t1 MTR_0891s0010 32.743 113 70 4 1 113 124 230 1.83e-15 70.9
MS.gene067600.t1 MTR_2086s0010 32.743 113 70 4 1 113 6 112 1.86e-15 68.9
MS.gene067600.t1 MTR_1996s0010 32.743 113 70 4 1 113 6 112 1.86e-15 68.9
MS.gene067600.t1 MTR_6g014290 32.110 109 67 3 4 112 316 417 1.95e-15 71.6
MS.gene067600.t1 MTR_5g035580 37.634 93 48 3 1 92 289 372 2.23e-15 71.2
MS.gene067600.t1 MTR_4g095008 40.217 92 51 3 1 90 291 380 2.38e-15 71.2
MS.gene067600.t1 MTR_7g070870 38.202 89 49 3 4 90 302 386 3.03e-15 71.2
MS.gene067600.t1 MTR_0036s0220 33.628 113 68 3 1 113 313 418 3.05e-15 71.2
MS.gene067600.t1 MTR_6g014190 37.079 89 51 2 4 92 125 208 3.28e-15 70.1
MS.gene067600.t1 MTR_7g070860 37.931 87 38 1 4 90 298 368 3.35e-15 70.9
MS.gene067600.t1 MTR_5g031830 37.624 101 53 4 7 103 314 408 4.75e-15 70.5
MS.gene067600.t1 MTR_1g032490 41.176 85 47 2 4 88 301 382 5.50e-15 70.5
MS.gene067600.t1 MTR_3g079480 33.036 112 69 4 1 112 323 428 5.71e-15 70.5
MS.gene067600.t1 MTR_7g013260 44.828 87 40 4 4 90 281 359 6.20e-15 70.1
MS.gene067600.t1 MTR_7g013240 44.828 87 40 4 4 90 280 358 6.25e-15 70.1
MS.gene067600.t1 MTR_8g064880 37.931 87 51 2 4 88 302 387 7.11e-15 70.1
MS.gene067600.t1 MTR_5g035560 38.710 93 47 4 1 92 287 370 7.44e-15 70.1
MS.gene067600.t1 MTR_1g107380 37.634 93 52 3 1 92 304 391 7.45e-15 70.1
MS.gene067600.t1 MTR_6g011340 37.647 85 48 2 4 88 318 397 1.02e-14 69.7
MS.gene067600.t1 MTR_8g007585 33.028 109 66 3 4 112 230 331 1.03e-14 69.3
MS.gene067600.t1 MTR_8g064870 39.080 87 50 2 4 88 300 385 1.36e-14 69.3
MS.gene067600.t1 MTR_5g031840 39.785 93 48 4 2 92 298 384 1.51e-14 68.9
MS.gene067600.t1 MTR_4g059370 41.772 79 46 0 4 82 218 296 1.71e-14 68.9
MS.gene067600.t1 MTR_1g107360 38.824 85 41 2 4 88 300 373 1.96e-14 68.9
MS.gene067600.t1 MTR_6g014240 33.028 109 66 3 4 112 285 386 2.11e-14 68.6
MS.gene067600.t1 MTR_6g014160 36.782 87 36 1 4 90 284 351 2.39e-14 68.6
MS.gene067600.t1 MTR_6g014020 35.632 87 51 2 4 90 318 399 2.41e-14 68.6
MS.gene067600.t1 MTR_4g094920 39.130 92 52 3 1 90 306 395 3.19e-14 68.2
MS.gene067600.t1 MTR_3g049970 41.176 85 47 2 4 88 300 381 3.52e-14 68.2
MS.gene067600.t1 MTR_6g013960 35.632 87 51 2 4 90 318 399 4.00e-14 67.8
MS.gene067600.t1 MTR_2g014900 41.772 79 43 1 4 82 286 361 4.06e-14 67.8
MS.gene067600.t1 MTR_3g479490 31.250 112 71 4 1 112 308 413 4.75e-14 67.8
MS.gene067600.t1 MTR_7g080900 40.449 89 43 4 1 89 291 369 5.93e-14 67.4
MS.gene067600.t1 MTR_1g107285 35.484 93 49 2 1 93 298 379 5.98e-14 67.4
MS.gene067600.t1 MTR_7g067120 37.647 85 43 3 4 88 271 345 6.29e-14 67.4
MS.gene067600.t1 MTR_3g479610 33.036 112 69 4 1 112 147 252 6.44e-14 67.0
MS.gene067600.t1 MTR_7g013200 34.545 110 62 5 4 113 280 379 7.18e-14 67.0
MS.gene067600.t1 MTR_3g084520 37.624 101 47 4 1 92 297 390 8.57e-14 67.0
MS.gene067600.t1 MTR_3g069710 41.176 85 47 3 4 88 288 369 9.55e-14 66.6
MS.gene067600.t1 MTR_8g043470 31.818 110 68 3 4 113 216 318 1.31e-13 66.2
MS.gene067600.t1 MTR_3g084540 37.624 101 47 4 1 92 297 390 1.45e-13 66.2
MS.gene067600.t1 MTR_3g084530 37.624 101 47 4 1 92 297 390 1.46e-13 66.2
MS.gene067600.t1 MTR_6g038230 40.449 89 43 4 1 89 291 369 1.62e-13 66.2
MS.gene067600.t1 MTR_1g090270 44.304 79 44 0 4 82 291 369 2.08e-13 65.9
MS.gene067600.t1 MTR_3g479470 34.211 114 58 4 4 112 318 419 2.40e-13 65.5
MS.gene067600.t1 MTR_1g107375 41.176 85 39 3 4 88 294 367 2.52e-13 65.5
MS.gene067600.t1 MTR_5g066390 32.000 100 61 3 14 113 63 155 2.60e-13 64.3
MS.gene067600.t1 MTR_8g007650 41.026 78 43 1 4 81 299 373 3.19e-13 65.5
MS.gene067600.t1 MTR_8g088560 35.455 110 54 5 1 103 291 390 3.61e-13 65.1
MS.gene067600.t1 MTR_6g038240 35.227 88 47 3 2 89 292 369 3.79e-13 65.1
MS.gene067600.t1 MTR_6g078320 33.051 118 70 2 1 109 306 423 6.28e-13 64.3
MS.gene067600.t1 MTR_0477s0010 41.935 62 35 1 31 92 178 238 7.40e-13 63.9
MS.gene067600.t1 MTR_7g080940 37.634 93 47 4 1 92 289 371 8.21e-13 63.9
MS.gene067600.t1 MTR_7g080935 37.634 93 47 4 1 92 289 371 1.06e-12 63.9
MS.gene067600.t1 MTR_8g007565 39.744 78 44 1 4 81 299 373 1.08e-12 63.9
MS.gene067600.t1 MTR_2g083430 43.478 69 36 1 14 82 297 362 1.22e-12 63.5
MS.gene067600.t1 MTR_5g098960 37.500 120 52 7 1 113 288 391 1.25e-12 63.5
MS.gene067600.t1 MTR_2g083480 40.278 72 40 1 11 82 294 362 1.54e-12 63.2
MS.gene067600.t1 MTR_7g067330 35.294 85 45 3 4 88 271 345 1.55e-12 63.2
MS.gene067600.t1 MTR_1g090280 41.463 82 48 0 1 82 138 219 1.57e-12 63.2
MS.gene067600.t1 MTR_5g090690 42.697 89 42 3 1 81 218 305 1.82e-12 63.2
MS.gene067600.t1 MTR_5g066410 39.506 81 46 1 4 84 275 352 2.17e-12 62.8
MS.gene067600.t1 MTR_7g039550 32.184 87 56 1 4 90 85 168 2.93e-12 62.0
MS.gene067600.t1 MTR_6g035295 33.333 87 55 1 4 90 307 390 3.00e-12 62.4
MS.gene067600.t1 MTR_5g039900 33.333 87 55 1 4 90 307 390 3.15e-12 62.4
MS.gene067600.t1 MTR_2g083380 38.667 75 43 1 14 88 314 385 3.94e-12 62.0
MS.gene067600.t1 MTR_5g072810 35.227 88 43 2 1 88 288 361 4.06e-12 62.0
MS.gene067600.t1 MTR_8g083280 34.783 92 47 4 2 92 298 377 4.29e-12 62.0
MS.gene067600.t1 MTR_6g038200 37.500 88 45 4 2 89 292 369 5.13e-12 62.0
MS.gene067600.t1 MTR_5g072820 52.000 50 23 1 39 88 308 356 7.10e-12 61.2
MS.gene067600.t1 MTR_6g038220 37.500 88 45 3 2 89 291 368 7.48e-12 61.2
MS.gene067600.t1 MTR_7g080950 34.579 107 56 5 1 103 284 380 1.37e-11 60.5
MS.gene067600.t1 MTR_8g083290 33.333 108 62 4 2 106 295 395 1.66e-11 60.5
MS.gene067600.t1 MTR_6g038300 34.884 86 47 2 4 89 294 370 2.85e-11 59.7
MS.gene067600.t1 MTR_2g086283 40.000 70 39 1 7 76 187 253 3.38e-11 59.3
MS.gene067600.t1 MTR_7g013180 34.545 110 64 4 4 113 288 389 7.54e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067600.t1 AT1G73880 59.341 91 34 1 3 93 300 387 1.03e-29 111
MS.gene067600.t1 AT3G16520 51.136 88 42 1 4 90 291 378 1.58e-28 108
MS.gene067600.t1 AT3G16520 51.136 88 42 1 4 90 291 378 1.65e-28 108
MS.gene067600.t1 AT3G16520 51.136 88 42 1 4 90 291 378 1.80e-28 108
MS.gene067600.t1 AT5G03490 60.674 89 24 1 2 90 301 378 1.03e-27 105
MS.gene067600.t1 AT1G51210 58.427 89 26 1 2 90 297 374 1.66e-27 105
MS.gene067600.t1 AT4G34135 54.023 87 35 2 4 90 310 391 2.01e-27 105
MS.gene067600.t1 AT2G36800 48.889 90 44 1 1 90 305 392 6.26e-27 103
MS.gene067600.t1 AT2G15490 48.276 87 45 0 4 90 306 392 4.64e-26 101
MS.gene067600.t1 AT3G53150 50.575 87 42 1 4 90 319 404 6.35e-26 101
MS.gene067600.t1 AT4G34138 49.425 87 41 1 4 90 309 392 6.85e-26 101
MS.gene067600.t1 AT2G15490 49.425 87 41 1 4 90 306 389 7.92e-26 100
MS.gene067600.t1 AT2G15480 47.126 87 43 1 4 90 309 392 1.13e-25 100
MS.gene067600.t1 AT4G34131 49.425 87 40 1 4 90 309 391 1.28e-25 100
MS.gene067600.t1 AT2G15480 47.126 87 43 1 4 90 309 392 1.73e-25 100
MS.gene067600.t1 AT1G01420 45.263 95 44 1 4 90 289 383 1.06e-24 97.8
MS.gene067600.t1 AT1G01420 45.263 95 44 1 4 90 292 386 1.06e-24 97.8
MS.gene067600.t1 AT2G36780 44.444 90 48 1 1 90 306 393 2.14e-24 97.1
MS.gene067600.t1 AT2G18570 51.087 92 40 1 4 90 288 379 5.71e-24 95.9
MS.gene067600.t1 AT2G36790 50.000 80 38 1 11 90 315 392 7.87e-24 95.5
MS.gene067600.t1 AT4G36770 46.392 97 42 1 4 90 284 380 6.57e-23 92.8
MS.gene067600.t1 AT1G01390 43.158 95 46 1 4 90 289 383 1.07e-22 92.0
MS.gene067600.t1 AT1G01390 43.158 95 46 1 4 90 306 400 1.13e-22 92.0
MS.gene067600.t1 AT2G18560 48.913 92 42 1 4 90 198 289 2.05e-22 90.9
MS.gene067600.t1 AT5G12890 48.936 94 44 2 1 90 301 394 4.04e-22 90.5
MS.gene067600.t1 AT2G29710 45.556 90 43 2 1 90 292 375 4.91e-22 90.5
MS.gene067600.t1 AT2G36760 44.444 90 48 1 1 90 306 393 6.86e-22 90.1
MS.gene067600.t1 AT3G53160 45.745 94 41 2 1 90 300 387 1.53e-21 89.0
MS.gene067600.t1 AT2G36770 43.333 90 49 1 1 90 306 393 3.24e-21 88.2
MS.gene067600.t1 AT2G36750 45.556 90 47 1 1 90 301 388 3.37e-21 88.2
MS.gene067600.t1 AT5G49690 50.617 81 30 1 4 84 295 365 4.40e-21 87.8
MS.gene067600.t1 AT5G66690 48.039 102 41 2 1 90 281 382 4.93e-21 87.4
MS.gene067600.t1 AT1G06000 46.512 86 39 2 10 90 268 351 7.45e-21 87.0
MS.gene067600.t1 AT1G07260 45.556 90 46 2 1 90 299 385 8.13e-21 87.0
MS.gene067600.t1 AT4G01070 39.796 98 51 1 1 90 286 383 9.14e-21 86.7
MS.gene067600.t1 AT3G50740 46.465 99 41 2 4 90 289 387 1.31e-20 86.3
MS.gene067600.t1 AT2G29730 43.333 90 44 2 1 90 293 375 1.99e-20 85.9
MS.gene067600.t1 AT1G07250 43.956 91 46 3 1 90 300 386 4.61e-20 84.7
MS.gene067600.t1 AT3G21800 43.750 96 41 3 4 90 293 384 7.03e-20 84.3
MS.gene067600.t1 AT2G16890 48.276 87 37 2 4 90 301 379 1.35e-19 83.6
MS.gene067600.t1 AT2G16890 48.276 87 37 2 4 90 301 379 1.47e-19 83.2
MS.gene067600.t1 AT2G29740 42.222 90 49 2 1 90 302 388 1.68e-19 83.2
MS.gene067600.t1 AT5G14860 47.778 90 40 2 1 90 305 387 2.00e-19 83.2
MS.gene067600.t1 AT2G29750 44.828 87 45 2 4 90 305 388 2.94e-19 82.4
MS.gene067600.t1 AT5G26310 40.196 102 49 1 1 90 281 382 5.24e-19 81.6
MS.gene067600.t1 AT3G21760 44.792 96 40 3 4 90 299 390 7.20e-19 81.3
MS.gene067600.t1 AT4G15280 42.105 95 42 3 5 90 293 383 9.94e-19 80.9
MS.gene067600.t1 AT4G15280 42.105 95 42 3 5 90 325 415 1.02e-18 80.9
MS.gene067600.t1 AT1G07240 45.055 91 39 3 4 90 302 385 1.11e-18 80.9
MS.gene067600.t1 AT3G11340 43.529 85 45 3 4 88 281 362 1.14e-18 80.9
MS.gene067600.t1 AT1G78270 40.230 87 48 1 4 90 317 399 1.17e-18 80.9
MS.gene067600.t1 AT3G21790 42.708 96 42 3 4 90 296 387 2.07e-18 80.1
MS.gene067600.t1 AT1G30530 47.126 87 37 2 3 89 291 368 4.71e-18 79.0
MS.gene067600.t1 AT3G46690 41.121 107 56 3 1 103 283 386 4.84e-18 79.0
MS.gene067600.t1 AT5G17050 46.591 88 38 2 1 88 295 373 2.06e-17 77.4
MS.gene067600.t1 AT1G10400 45.055 91 38 2 1 90 298 377 2.82e-17 77.0
MS.gene067600.t1 AT5G05880 39.048 105 55 4 4 103 285 385 4.63e-17 76.3
MS.gene067600.t1 AT2G22930 43.210 81 43 1 2 82 270 347 1.76e-16 74.7
MS.gene067600.t1 AT4G09500 42.683 82 44 1 2 83 270 348 1.83e-16 74.7
MS.gene067600.t1 AT3G21780 43.158 95 41 3 5 90 288 378 1.98e-16 74.3
MS.gene067600.t1 AT2G31750 35.955 89 48 2 1 89 288 367 2.35e-16 74.3
MS.gene067600.t1 AT2G31750 35.955 89 48 2 1 89 288 367 3.68e-16 73.6
MS.gene067600.t1 AT2G22590 42.857 84 40 2 1 81 299 377 4.12e-16 73.6
MS.gene067600.t1 AT3G29630 39.080 87 50 1 2 88 272 355 4.27e-16 73.6
MS.gene067600.t1 AT5G54060 43.678 87 46 1 2 88 295 378 4.32e-16 73.6
MS.gene067600.t1 AT3G29630 39.080 87 50 1 2 88 246 329 4.90e-16 73.2
MS.gene067600.t1 AT2G26480 37.500 120 67 4 4 118 281 397 5.47e-16 73.2
MS.gene067600.t1 AT5G05870 41.176 85 47 2 4 88 291 372 5.59e-16 73.2
MS.gene067600.t1 AT3G46720 44.706 85 37 3 4 88 284 358 6.30e-16 73.2
MS.gene067600.t1 AT2G36970 40.000 85 47 2 4 88 306 386 8.01e-16 72.8
MS.gene067600.t1 AT3G46680 40.000 120 58 5 4 118 286 396 8.63e-16 72.8
MS.gene067600.t1 AT2G23260 38.889 90 47 2 1 90 287 368 9.21e-16 72.4
MS.gene067600.t1 AT1G22380 33.945 109 65 3 4 112 318 419 9.71e-16 72.4
MS.gene067600.t1 AT3G46700 41.935 93 51 2 1 93 278 367 1.03e-15 72.4
MS.gene067600.t1 AT5G17030 47.674 86 36 3 3 88 296 372 1.08e-15 72.4
MS.gene067600.t1 AT1G05680 36.449 107 55 4 1 103 288 385 1.19e-15 72.4
MS.gene067600.t1 AT5G53990 41.379 87 48 1 2 88 270 353 1.41e-15 72.0
MS.gene067600.t1 AT3G46660 38.679 106 59 3 4 106 292 394 1.99e-15 71.6
MS.gene067600.t1 AT2G28080 44.706 85 43 3 4 88 309 389 2.02e-15 71.6
MS.gene067600.t1 AT3G21750 36.735 98 47 3 4 90 285 378 3.09e-15 71.2
MS.gene067600.t1 AT4G15260 40.625 96 44 3 4 90 172 263 3.30e-15 70.9
MS.gene067600.t1 AT1G22400 33.945 109 65 3 4 112 319 420 3.67e-15 70.9
MS.gene067600.t1 AT3G46670 40.000 105 57 4 5 106 286 387 4.23e-15 70.9
MS.gene067600.t1 AT4G27570 42.529 87 47 1 2 88 276 359 4.44e-15 70.5
MS.gene067600.t1 AT5G59590 46.591 88 44 2 1 88 283 367 4.88e-15 70.5
MS.gene067600.t1 AT5G65550 39.362 94 51 1 1 94 295 382 6.56e-15 70.1
MS.gene067600.t1 AT1G22360 33.945 109 65 4 4 112 315 416 7.95e-15 70.1
MS.gene067600.t1 AT3G46650 39.252 107 57 4 4 106 269 371 8.39e-15 69.7
MS.gene067600.t1 AT1G22360 33.945 109 65 4 4 112 315 416 8.88e-15 69.7
MS.gene067600.t1 AT5G59580 45.455 88 45 2 1 88 281 365 9.77e-15 69.7
MS.gene067600.t1 AT5G54010 42.529 87 47 1 2 88 276 359 1.09e-14 69.7
MS.gene067600.t1 AT3G55700 40.000 85 48 3 4 88 287 368 1.35e-14 69.3
MS.gene067600.t1 AT1G64910 40.230 87 49 1 2 88 270 353 1.51e-14 68.9
MS.gene067600.t1 AT1G22340 33.333 117 72 4 1 117 315 425 2.30e-14 68.6
MS.gene067600.t1 AT4G27560 41.379 87 48 1 2 88 276 359 3.33e-14 68.2
MS.gene067600.t1 AT4G14090 37.778 90 50 2 1 90 287 370 3.71e-14 68.2
MS.gene067600.t1 AT1G24100 34.211 114 62 4 1 113 293 394 4.26e-14 67.8
MS.gene067600.t1 AT5G05860 39.623 106 53 4 4 103 284 384 4.27e-14 67.8
MS.gene067600.t1 AT4G09500 42.169 83 45 1 2 84 245 324 5.03e-14 67.4
MS.gene067600.t1 AT1G05675 33.962 106 58 3 4 106 291 387 5.67e-14 67.4
MS.gene067600.t1 AT2G31790 38.710 93 49 4 1 92 290 375 5.97e-14 67.4
MS.gene067600.t1 AT4G15490 38.710 93 49 3 1 92 298 383 6.98e-14 67.4
MS.gene067600.t1 AT5G17040 44.706 85 38 2 4 88 281 356 1.15e-13 66.6
MS.gene067600.t1 AT5G05900 34.615 104 54 3 4 103 291 384 1.76e-13 66.2
MS.gene067600.t1 AT2G43820 33.645 107 57 4 1 103 282 378 1.94e-13 65.9
MS.gene067600.t1 AT5G17040 44.706 85 38 2 4 88 179 254 2.26e-13 65.5
MS.gene067600.t1 AT2G23250 34.444 90 51 2 1 90 269 350 2.38e-13 65.9
MS.gene067600.t1 AT5G05890 34.615 104 61 3 4 103 289 389 2.84e-13 65.5
MS.gene067600.t1 AT4G15480 36.364 88 54 2 1 88 305 390 3.34e-13 65.5
MS.gene067600.t1 AT1G64920 40.659 91 47 2 2 88 270 357 5.82e-13 64.7
MS.gene067600.t1 AT1G50580 36.782 87 52 1 2 88 271 354 9.43e-13 63.9
MS.gene067600.t1 AT4G15550 33.962 106 63 4 4 103 299 403 1.58e-12 63.5
MS.gene067600.t1 AT1G22370 30.973 113 71 3 4 116 313 418 2.65e-12 62.8
MS.gene067600.t1 AT2G43840 29.907 107 61 4 1 103 282 378 4.86e-12 62.0
MS.gene067600.t1 AT2G43840 29.907 107 61 4 1 103 282 378 4.86e-12 62.0
MS.gene067600.t1 AT5G38040 38.202 89 49 3 1 88 284 367 6.75e-12 61.6
MS.gene067600.t1 AT2G30140 38.889 90 42 3 1 90 286 362 1.23e-11 60.8
MS.gene067600.t1 AT2G30140 38.889 90 42 3 1 90 287 363 1.23e-11 60.8
MS.gene067600.t1 AT3G22250 33.043 115 63 5 1 112 302 405 1.74e-11 60.5
MS.gene067600.t1 AT1G22370 30.973 113 71 3 4 116 143 248 2.14e-11 59.7
MS.gene067600.t1 AT4G15500 34.409 93 53 3 1 92 294 379 2.55e-11 60.1
MS.gene067600.t1 AT3G21560 33.333 93 54 3 1 92 304 389 3.97e-11 59.3
MS.gene067600.t1 AT5G38010 33.028 109 60 5 4 106 291 392 4.56e-11 59.3
MS.gene067600.t1 AT1G05560 35.106 94 56 2 1 90 326 418 4.58e-11 59.3
MS.gene067600.t1 AT1G05530 35.106 94 56 2 1 90 279 371 5.93e-11 58.9

Find 80 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGCTGGGGTTGGGATACT+TGG 0.203466 8.3:-31629551 MS.gene067600:CDS
GGGTTTGAGGACCGGGTTTC+GGG 0.226025 8.3:-31629683 MS.gene067600:CDS
GGGGTTTGAGGACCGGGTTT+CGG 0.290924 8.3:-31629684 MS.gene067600:CDS
GGCACCACAGATGGCGATAT+TGG 0.308277 8.3:-31629636 MS.gene067600:CDS
GCATTCGGGTTGGAGAGGTC+TGG 0.318498 8.3:-31629782 MS.gene067600:CDS
TGCCGGAGGGGTTTGAGGAC+CGG 0.320782 8.3:-31629691 MS.gene067600:CDS
CAGCAGTTGGAGGAAGGTTA+TGG 0.330214 8.3:-31629719 MS.gene067600:CDS
GTATTAGAAGCGGTGGTGGC+TGG 0.331841 8.3:-31629566 MS.gene067600:CDS
GAGGACCGGGTTTCGGGTAG+GGG 0.334060 8.3:-31629677 MS.gene067600:CDS
AGGACCGGGTTTCGGGTAGG+GGG 0.350680 8.3:-31629676 MS.gene067600:CDS
GGTCTGGGACACCATTTGTT+TGG 0.358153 8.3:-31629766 MS.gene067600:CDS
CAGATGGAGGCGTTGGCATT+CGG 0.359696 8.3:-31629797 MS.gene067600:CDS
TGAGGACCGGGTTTCGGGTA+GGG 0.369473 8.3:-31629678 MS.gene067600:CDS
AAGATATGGGAGTGGCAGTT+AGG 0.375275 8.3:-31629482 MS.gene067600:CDS
AAGCGGTGGTGGCTGGGGTT+GGG 0.376593 8.3:-31629559 MS.gene067600:CDS
AAGACTGTTGGTGGAAGATA+TGG 0.383509 8.3:-31629496 MS.gene067600:CDS
GTCTGGGACACCATTTGTTT+GGG 0.386910 8.3:-31629765 MS.gene067600:CDS
GAAGCGGTGGTGGCTGGGGT+TGG 0.389163 8.3:-31629560 MS.gene067600:CDS
GCCGGAGGGGTTTGAGGACC+GGG 0.395529 8.3:-31629690 MS.gene067600:CDS
ACTACCCGACCCAACACGTC+TGG 0.403606 8.3:+31629429 None:intergenic
GCGGGTTCTTGAGTCATTGC+GGG 0.407860 8.3:-31629598 MS.gene067600:CDS
TGGGTCATCGGGTTGTTGGC+GGG 0.408151 8.3:-31629616 MS.gene067600:CDS
CATTCGGGTTGGAGAGGTCT+GGG 0.416884 8.3:-31629781 MS.gene067600:CDS
AGATGGAGGCGTTGGCATTC+GGG 0.419134 8.3:-31629796 MS.gene067600:CDS
TATTAGAAGCGGTGGTGGCT+GGG 0.420185 8.3:-31629565 MS.gene067600:CDS
TTGGGATACTTGGGTGGCAA+TGG 0.423886 8.3:-31629541 MS.gene067600:CDS
GCACCACAGATGGCGATATT+GGG 0.425654 8.3:-31629635 MS.gene067600:CDS
AGTGGCAGTTAGGGTTTGTG+AGG 0.427724 8.3:-31629472 MS.gene067600:CDS
ATATTGGGTCATCGGGTTGT+TGG 0.434290 8.3:-31629620 MS.gene067600:CDS
AGATATGGGAGTGGCAGTTA+GGG 0.442216 8.3:-31629481 MS.gene067600:CDS
ATTGGTGCCGGAGGGGTTTG+AGG 0.446495 8.3:-31629696 MS.gene067600:CDS
TTGGGTCATCGGGTTGTTGG+CGG 0.452473 8.3:-31629617 MS.gene067600:CDS
TTGAGGACCGGGTTTCGGGT+AGG 0.454640 8.3:-31629679 MS.gene067600:CDS
GGACCGGGTTTCGGGTAGGG+GGG 0.461169 8.3:-31629675 MS.gene067600:CDS
GCCTTCCACGGCACAGCAGT+TGG 0.471908 8.3:-31629732 MS.gene067600:CDS
CGACCCAACACGTCTGGGTC+GGG 0.472855 8.3:+31629435 None:intergenic
GGCAGTTAGGGTTTGTGAGG+GGG 0.473311 8.3:-31629469 MS.gene067600:CDS
TCCAACTGCTGTGCCGTGGA+AGG 0.474048 8.3:+31629731 None:intergenic
GATGGCGATATTGGGTCATC+GGG 0.480123 8.3:-31629627 MS.gene067600:CDS
CGACCCAGACGTGTTGGGTC+GGG 0.482547 8.3:-31629433 MS.gene067600:CDS
GAGGGGTTGGGCACCACAGA+TGG 0.483162 8.3:-31629645 MS.gene067600:CDS
GGATACTTGGGTGGCAATGG+AGG 0.484035 8.3:-31629538 MS.gene067600:CDS
GTTCCCGACCCAGACGTGTT+GGG 0.485695 8.3:-31629438 MS.gene067600:CDS
TGGCTGGGGTTGGGATACTT+GGG 0.489767 8.3:-31629550 MS.gene067600:CDS
CCCTTCACTACCCAAACAAA+TGG 0.492010 8.3:+31629755 None:intergenic
ACCATTTGTTTGGGTAGTGA+AGG 0.495404 8.3:-31629756 MS.gene067600:CDS
GGTTATGGATTGGTGCCGGA+GGG 0.501682 8.3:-31629704 MS.gene067600:CDS
ATTAGAAGCGGTGGTGGCTG+GGG 0.506477 8.3:-31629564 MS.gene067600:CDS
AGATGGCGATATTGGGTCAT+CGG 0.506812 8.3:-31629628 MS.gene067600:CDS
GTGGCAGTTAGGGTTTGTGA+GGG 0.509797 8.3:-31629471 MS.gene067600:CDS
TTCAGTATTAGAAGCGGTGG+TGG 0.511410 8.3:-31629570 MS.gene067600:CDS
TGTTCCCGACCCAGACGTGT+TGG 0.515205 8.3:-31629439 MS.gene067600:CDS
AAGGGAACAGATGGAGGCGT+TGG 0.528926 8.3:-31629804 None:intergenic
CTGGGGTTGGGATACTTGGG+TGG 0.531016 8.3:-31629547 MS.gene067600:CDS
GGTAGTGAAGGGGCCTTCCA+CGG 0.533221 8.3:-31629744 MS.gene067600:CDS
TGGCAGTTAGGGTTTGTGAG+GGG 0.534907 8.3:-31629470 MS.gene067600:CDS
CCATTTGTTTGGGTAGTGAA+GGG 0.537801 8.3:-31629755 MS.gene067600:CDS
GGAGGCGTTGGCATTCGGGT+TGG 0.551264 8.3:-31629792 MS.gene067600:CDS
CTACCCGACCCAACACGTCT+GGG 0.558796 8.3:+31629430 None:intergenic
GTTGGAGGAAGGTTATGGAT+TGG 0.561761 8.3:-31629714 MS.gene067600:CDS
CCGACCCAGACGTGTTGGGT+CGG 0.563043 8.3:-31629434 MS.gene067600:CDS
TTCCTCCAACTGCTGTGCCG+TGG 0.566116 8.3:+31629727 None:intergenic
GTTATGGATTGGTGCCGGAG+GGG 0.566479 8.3:-31629703 MS.gene067600:CDS
CGTTGGCATTCGGGTTGGAG+AGG 0.576200 8.3:-31629787 MS.gene067600:CDS
TTCCACGGCACAGCAGTTGG+AGG 0.576671 8.3:-31629729 MS.gene067600:CDS
ACCCGGTCCTCAAACCCCTC+CGG 0.577787 8.3:+31629689 None:intergenic
CATTTGTTTGGGTAGTGAAG+GGG 0.580925 8.3:-31629754 MS.gene067600:CDS
CCGACCCAACACGTCTGGGT+CGG 0.587380 8.3:+31629434 None:intergenic
GGTTCTTGAGTCATTGCGGG+TGG 0.588211 8.3:-31629595 MS.gene067600:CDS
ACGGCACAGCAGTTGGAGGA+AGG 0.588556 8.3:-31629725 MS.gene067600:CDS
GGAAGGTTATGGATTGGTGC+CGG 0.590141 8.3:-31629708 MS.gene067600:CDS
TGTCAATGCAAGACTGTTGG+TGG 0.593641 8.3:-31629505 MS.gene067600:CDS
GGCGGGTTCTTGAGTCATTG+CGG 0.595804 8.3:-31629599 MS.gene067600:CDS
AGGTTATGGATTGGTGCCGG+AGG 0.597009 8.3:-31629705 MS.gene067600:CDS
GTTTGTCAATGCAAGACTGT+TGG 0.620281 8.3:-31629508 MS.gene067600:CDS
AGACTGTTGGTGGAAGATAT+GGG 0.622094 8.3:-31629495 MS.gene067600:CDS
TGACCCAATATCGCCATCTG+TGG 0.635430 8.3:+31629632 None:intergenic
GAATTCAGTATTAGAAGCGG+TGG 0.645473 8.3:-31629573 MS.gene067600:CDS
GTGGAATTCAGTATTAGAAG+CGG 0.679939 8.3:-31629576 MS.gene067600:CDS
GTTGGTGGAAGATATGGGAG+TGG 0.680319 8.3:-31629490 MS.gene067600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
GTGGAATTCAGTATTAGAAG+CGG - chr8.3:31629648-31629667 MS.gene067600:CDS 35.0%
ACCATTTGTTTGGGTAGTGA+AGG - chr8.3:31629468-31629487 MS.gene067600:CDS 40.0%
CATTTGTTTGGGTAGTGAAG+GGG - chr8.3:31629470-31629489 MS.gene067600:CDS 40.0%
CCATTTGTTTGGGTAGTGAA+GGG - chr8.3:31629469-31629488 MS.gene067600:CDS 40.0%
GAATTCAGTATTAGAAGCGG+TGG - chr8.3:31629651-31629670 MS.gene067600:CDS 40.0%
GTTTGTCAATGCAAGACTGT+TGG - chr8.3:31629716-31629735 MS.gene067600:CDS 40.0%
! AAGACTGTTGGTGGAAGATA+TGG - chr8.3:31629728-31629747 MS.gene067600:CDS 40.0%
! AGACTGTTGGTGGAAGATAT+GGG - chr8.3:31629729-31629748 MS.gene067600:CDS 40.0%
AAGATATGGGAGTGGCAGTT+AGG - chr8.3:31629742-31629761 MS.gene067600:CDS 45.0%
AGATATGGGAGTGGCAGTTA+GGG - chr8.3:31629743-31629762 MS.gene067600:CDS 45.0%
AGATGGCGATATTGGGTCAT+CGG - chr8.3:31629596-31629615 MS.gene067600:CDS 45.0%
CCCTTCACTACCCAAACAAA+TGG + chr8.3:31629472-31629491 None:intergenic 45.0%
GTTGGAGGAAGGTTATGGAT+TGG - chr8.3:31629510-31629529 MS.gene067600:CDS 45.0%
TGTCAATGCAAGACTGTTGG+TGG - chr8.3:31629719-31629738 MS.gene067600:CDS 45.0%
TTCAGTATTAGAAGCGGTGG+TGG - chr8.3:31629654-31629673 MS.gene067600:CDS 45.0%
! ATATTGGGTCATCGGGTTGT+TGG - chr8.3:31629604-31629623 MS.gene067600:CDS 45.0%
! GTCTGGGACACCATTTGTTT+GGG - chr8.3:31629459-31629478 MS.gene067600:CDS 45.0%
AGTGGCAGTTAGGGTTTGTG+AGG - chr8.3:31629752-31629771 MS.gene067600:CDS 50.0%
CAGCAGTTGGAGGAAGGTTA+TGG - chr8.3:31629505-31629524 MS.gene067600:CDS 50.0%
GATGGCGATATTGGGTCATC+GGG - chr8.3:31629597-31629616 MS.gene067600:CDS 50.0%
GCACCACAGATGGCGATATT+GGG - chr8.3:31629589-31629608 MS.gene067600:CDS 50.0%
GTGGCAGTTAGGGTTTGTGA+GGG - chr8.3:31629753-31629772 MS.gene067600:CDS 50.0%
TGACCCAATATCGCCATCTG+TGG + chr8.3:31629595-31629614 None:intergenic 50.0%
TGGCAGTTAGGGTTTGTGAG+GGG - chr8.3:31629754-31629773 MS.gene067600:CDS 50.0%
TTGGGATACTTGGGTGGCAA+TGG - chr8.3:31629683-31629702 MS.gene067600:CDS 50.0%
! GGTCTGGGACACCATTTGTT+TGG - chr8.3:31629458-31629477 MS.gene067600:CDS 50.0%
! GTTGGTGGAAGATATGGGAG+TGG - chr8.3:31629734-31629753 MS.gene067600:CDS 50.0%
! TATTAGAAGCGGTGGTGGCT+GGG - chr8.3:31629659-31629678 MS.gene067600:CDS 50.0%
!! GGAAGGTTATGGATTGGTGC+CGG - chr8.3:31629516-31629535 MS.gene067600:CDS 50.0%
AGTTAGGGTTTGTGAGGGGG+CGG - chr8.3:31629758-31629777 MS.gene067600:CDS 55.0%
GCGGGTTCTTGAGTCATTGC+GGG - chr8.3:31629626-31629645 MS.gene067600:CDS 55.0%
GGATACTTGGGTGGCAATGG+AGG - chr8.3:31629686-31629705 MS.gene067600:CDS 55.0%
GGCACCACAGATGGCGATAT+TGG - chr8.3:31629588-31629607 MS.gene067600:CDS 55.0%
GGCAGTTAGGGTTTGTGAGG+GGG - chr8.3:31629755-31629774 MS.gene067600:CDS 55.0%
GGTTCTTGAGTCATTGCGGG+TGG - chr8.3:31629629-31629648 MS.gene067600:CDS 55.0%
TGGCTGGGGTTGGGATACTT+GGG - chr8.3:31629674-31629693 MS.gene067600:CDS 55.0%
! ATTAGAAGCGGTGGTGGCTG+GGG - chr8.3:31629660-31629679 MS.gene067600:CDS 55.0%
! GGCGGGTTCTTGAGTCATTG+CGG - chr8.3:31629625-31629644 MS.gene067600:CDS 55.0%
! GTATTAGAAGCGGTGGTGGC+TGG - chr8.3:31629658-31629677 MS.gene067600:CDS 55.0%
! TTGGGTCATCGGGTTGTTGG+CGG - chr8.3:31629607-31629626 MS.gene067600:CDS 55.0%
!! AGGTTATGGATTGGTGCCGG+AGG - chr8.3:31629519-31629538 MS.gene067600:CDS 55.0%
!! CATTCGGGTTGGAGAGGTCT+GGG - chr8.3:31629443-31629462 MS.gene067600:CDS 55.0%
!! GGTTATGGATTGGTGCCGGA+GGG - chr8.3:31629520-31629539 MS.gene067600:CDS 55.0%
!! GTTATGGATTGGTGCCGGAG+GGG - chr8.3:31629521-31629540 MS.gene067600:CDS 55.0%
ACGGCACAGCAGTTGGAGGA+AGG - chr8.3:31629499-31629518 MS.gene067600:CDS 60.0%
CTACCCGACCCAACACGTCT+GGG + chr8.3:31629797-31629816 None:intergenic 60.0%
CTGGGGTTGGGATACTTGGG+TGG - chr8.3:31629677-31629696 MS.gene067600:CDS 60.0%
GGGGTTTGAGGACCGGGTTT+CGG - chr8.3:31629540-31629559 MS.gene067600:CDS 60.0%
GGGTTTGAGGACCGGGTTTC+GGG - chr8.3:31629541-31629560 MS.gene067600:CDS 60.0%
GGTAGTGAAGGGGCCTTCCA+CGG - chr8.3:31629480-31629499 MS.gene067600:CDS 60.0%
GTGGCTGGGGTTGGGATACT+TGG - chr8.3:31629673-31629692 MS.gene067600:CDS 60.0%
GTTCCCGACCCAGACGTGTT+GGG - chr8.3:31629786-31629805 MS.gene067600:CDS 60.0%
TCCAACTGCTGTGCCGTGGA+AGG + chr8.3:31629496-31629515 None:intergenic 60.0%
TGTTCCCGACCCAGACGTGT+TGG - chr8.3:31629785-31629804 MS.gene067600:CDS 60.0%
TTCCACGGCACAGCAGTTGG+AGG - chr8.3:31629495-31629514 MS.gene067600:CDS 60.0%
TTCCTCCAACTGCTGTGCCG+TGG + chr8.3:31629500-31629519 None:intergenic 60.0%
! TGAGGACCGGGTTTCGGGTA+GGG - chr8.3:31629546-31629565 MS.gene067600:CDS 60.0%
! TGGGTCATCGGGTTGTTGGC+GGG - chr8.3:31629608-31629627 MS.gene067600:CDS 60.0%
! TTGAGGACCGGGTTTCGGGT+AGG - chr8.3:31629545-31629564 MS.gene067600:CDS 60.0%
!! ATTGGTGCCGGAGGGGTTTG+AGG - chr8.3:31629528-31629547 MS.gene067600:CDS 60.0%
!! CGTTGGCATTCGGGTTGGAG+AGG - chr8.3:31629437-31629456 MS.gene067600:CDS 60.0%
!! GCATTCGGGTTGGAGAGGTC+TGG - chr8.3:31629442-31629461 MS.gene067600:CDS 60.0%
ACCCGGTCCTCAAACCCCTC+CGG + chr8.3:31629538-31629557 None:intergenic 65.0%
CAACCCCCCTACCCGAAACC+CGG + chr8.3:31629555-31629574 None:intergenic 65.0%
CCGACCCAACACGTCTGGGT+CGG + chr8.3:31629793-31629812 None:intergenic 65.0%
CCGACCCAGACGTGTTGGGT+CGG - chr8.3:31629790-31629809 MS.gene067600:CDS 65.0%
CGACCCAACACGTCTGGGTC+GGG + chr8.3:31629792-31629811 None:intergenic 65.0%
CGACCCAGACGTGTTGGGTC+GGG - chr8.3:31629791-31629810 MS.gene067600:CDS 65.0%
GAGGGGTTGGGCACCACAGA+TGG - chr8.3:31629579-31629598 MS.gene067600:CDS 65.0%
GCCTTCCACGGCACAGCAGT+TGG - chr8.3:31629492-31629511 MS.gene067600:CDS 65.0%
GGGGGTTGTGGTGAGGGGTT+GGG - chr8.3:31629567-31629586 MS.gene067600:CDS 65.0%
GGGTAGGGGGGTTGTGGTGA+GGG - chr8.3:31629561-31629580 MS.gene067600:CDS 65.0%
GGTAGGGGGGTTGTGGTGAG+GGG - chr8.3:31629562-31629581 MS.gene067600:CDS 65.0%
TGCCGGAGGGGTTTGAGGAC+CGG - chr8.3:31629533-31629552 MS.gene067600:CDS 65.0%
! AAGCGGTGGTGGCTGGGGTT+GGG - chr8.3:31629665-31629684 MS.gene067600:CDS 65.0%
! AGGACCGGGTTTCGGGTAGG+GGG - chr8.3:31629548-31629567 MS.gene067600:CDS 65.0%
! GAGGACCGGGTTTCGGGTAG+GGG - chr8.3:31629547-31629566 MS.gene067600:CDS 65.0%
! GGTTTCGGGTAGGGGGGTTG+TGG - chr8.3:31629555-31629574 MS.gene067600:CDS 65.0%
!! GGAGGCGTTGGCATTCGGGT+TGG - chr8.3:31629432-31629451 MS.gene067600:CDS 65.0%
CGGGTAGGGGGGTTGTGGTG+AGG - chr8.3:31629560-31629579 MS.gene067600:CDS 70.0%
GCCGGAGGGGTTTGAGGACC+GGG - chr8.3:31629534-31629553 MS.gene067600:CDS 70.0%
GGGGGGTTGTGGTGAGGGGT+TGG - chr8.3:31629566-31629585 MS.gene067600:CDS 70.0%
! GAAGCGGTGGTGGCTGGGGT+TGG - chr8.3:31629664-31629683 MS.gene067600:CDS 70.0%
! GGACCGGGTTTCGGGTAGGG+GGG - chr8.3:31629549-31629568 MS.gene067600:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 31629430 31629816 31629430 ID=MS.gene067600
chr8.3 mRNA 31629430 31629816 31629430 ID=MS.gene067600.t1;Parent=MS.gene067600
chr8.3 exon 31629430 31629816 31629430 ID=MS.gene067600.t1.exon1;Parent=MS.gene067600.t1
chr8.3 CDS 31629430 31629816 31629430 ID=cds.MS.gene067600.t1;Parent=MS.gene067600.t1
Gene Sequence

>MS.gene067600

ATGGAGGCGTTGGCATTCGGGTTGGAGAGGTCTGGGACACCATTTGTTTGGGTAGTGAAGGGGCCTTCCACGGCACAGCAGTTGGAGGAAGGTTATGGATTGGTGCCGGAGGGGTTTGAGGACCGGGTTTCGGGTAGGGGGGTTGTGGTGAGGGGTTGGGCACCACAGATGGCGATATTGGGTCATCGGGTTGTTGGCGGGTTCTTGAGTCATTGCGGGTGGAATTCAGTATTAGAAGCGGTGGTGGCTGGGGTTGGGATACTTGGGTGGCAATGGAGGCTGATCAGTTTGTCAATGCAAGACTGTTGGTGGAAGATATGGGAGTGGCAGTTAGGGTTTGTGAGGGGGCGGATTCTGTTCCCGACCCAGACGTGTTGGGTCGGGTAG
Protein sequence

>MS.gene067600.t1

MEALAFGLERSGTPFVWVVKGPSTAQQLEEGYGLVPEGFEDRVSGRGVVVRGWAPQMAILGHRVVGGFLSHCGWNSVLEAVVAGVGILGWQWRLISLSMQDCWWKIWEWQLGFVRGRILFPTQTCWVG