AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068550.t1 MTR_1g067570 95.166 931 45 0 42 972 19 949 0.0 1747
MS.gene068550.t1 MTR_5g042180 84.158 202 22 3 771 972 92 283 1.06e-105 330
MS.gene068550.t1 MTR_7g022810 33.144 353 182 10 654 972 300 632 4.21e-33 137
MS.gene068550.t1 MTR_7g099410 29.617 574 279 21 62 571 69 581 4.91e-31 132
MS.gene068550.t1 MTR_7g099410 29.982 557 265 21 79 571 5 500 8.38e-31 131
MS.gene068550.t1 MTR_1g069190 26.907 472 249 19 96 520 1 423 9.47e-19 92.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068550.t1 AT3G53540 36.746 928 476 29 85 970 61 919 1.75e-139 441
MS.gene068550.t1 AT3G53540 36.638 928 477 29 85 970 92 950 5.29e-139 440
MS.gene068550.t1 AT4G28760 30.977 481 235 16 79 509 82 515 1.39e-35 146
MS.gene068550.t1 AT4G28760 30.977 481 235 16 79 509 82 515 1.39e-35 146
MS.gene068550.t1 AT5G43880 27.027 518 232 22 85 557 66 482 5.65e-26 115
MS.gene068550.t1 AT5G43880 27.027 518 232 22 85 557 66 482 5.65e-26 115
MS.gene068550.t1 AT5G43880 27.027 518 232 22 85 557 66 482 5.65e-26 115
MS.gene068550.t1 AT5G43880 27.027 518 232 22 85 557 66 482 5.65e-26 115
MS.gene068550.t1 AT2G39435 34.050 279 159 9 714 972 190 463 8.51e-26 112
MS.gene068550.t1 AT2G39435 34.050 279 159 9 714 972 190 463 8.51e-26 112
MS.gene068550.t1 AT2G39435 34.050 279 159 9 714 972 190 463 8.51e-26 112
MS.gene068550.t1 AT2G39435 34.050 279 159 9 714 972 190 463 8.51e-26 112
MS.gene068550.t1 AT2G39435 34.050 279 159 9 714 972 190 463 8.51e-26 112
MS.gene068550.t1 AT2G39435 33.333 267 153 9 714 960 190 451 4.28e-22 101
MS.gene068550.t1 AT2G20240 25.968 439 225 14 80 491 12 377 1.39e-16 85.1

Find 230 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGGTTGTGGGCGGGCTAC+TGG 0.110591 1.2:+50983676 None:intergenic
TTGCAGTTCTCATTTAAATT+TGG 0.111515 1.2:-50982286 MS.gene068550:intron
AATGCTGACATGCACCTTTC+TGG 0.124676 1.2:+50983657 None:intergenic
CTCTTCTCCTCTCCCGTTTA+AGG 0.163515 1.2:+50980757 None:intergenic
TCTTCCTCTCCTAGATTTAA+AGG 0.174348 1.2:-50981281 MS.gene068550:CDS
TGTTGTCCTAAAACCTAATA+TGG 0.174399 1.2:-50981543 MS.gene068550:CDS
TCAGCTAATAACTTCTTAAT+TGG 0.212274 1.2:+50982232 None:intergenic
CTAAGGGGCTCAAAGGTTTC+AGG 0.216196 1.2:+50980549 None:intergenic
CTGATAATAATTTGGAAGTT+TGG 0.219189 1.2:-50978284 MS.gene068550:CDS
CCTGCTTCATCTACTGTCTT+TGG 0.228985 1.2:-50980843 MS.gene068550:CDS
CTTCTCTTGGATTCAGTTGC+TGG 0.236414 1.2:+50982199 None:intergenic
TGCTCAAACTGATAATAATT+TGG 0.237442 1.2:-50978292 MS.gene068550:CDS
AAGGGATCAGGAAGAATTTA+AGG 0.251312 1.2:-50982020 MS.gene068550:CDS
TGCAGTTCTCATTTAAATTT+GGG 0.277047 1.2:-50982285 MS.gene068550:intron
GATAGTTCAAGCAGTGCTTC+TGG 0.278337 1.2:-50981245 MS.gene068550:CDS
TCATCTTGTTCTGAATGTTT+TGG 0.281356 1.2:-50979501 MS.gene068550:CDS
TGGGTTGTGGGCGGGCTACT+GGG 0.285745 1.2:+50983677 None:intergenic
AGAAATGCAGCCAAACCTTT+TGG 0.297212 1.2:-50978096 MS.gene068550:CDS
GGGTTGTGGGCGGGCTACTG+GGG 0.306712 1.2:+50983678 None:intergenic
TCGGCTCGTGTCTTAGTAAA+AGG 0.315444 1.2:-50980429 MS.gene068550:CDS
TCAGCACGCAAGAATGTTCT+AGG 0.325404 1.2:+50980816 None:intergenic
TCCTTGTGCTGCTTGTTATT+AGG 0.326961 1.2:+50982121 None:intergenic
ATTGATAGTAGATGATTTAG+TGG 0.328822 1.2:-50977917 MS.gene068550:CDS
TTCACCCAATCTTGAGGTTC+AGG 0.330620 1.2:-50980574 MS.gene068550:CDS
ATGTTCAAAGTTCTCCATAT+TGG 0.331456 1.2:+50981700 None:intergenic
GAAAGGTGCATGTCAGCATT+TGG 0.331531 1.2:-50983654 MS.gene068550:CDS
TCAGCATGATTTCCATGTTC+TGG 0.336312 1.2:+50981461 None:intergenic
CTCTCCCGTTTAAGGTCCTT+TGG 0.339239 1.2:+50980765 None:intergenic
TCTTCGGATAAGGTTCTTCC+TGG 0.346250 1.2:-50980456 MS.gene068550:CDS
TTCTGAATCTTCTTCGGATA+AGG 0.357900 1.2:-50980466 MS.gene068550:CDS
TACCAGTTTCCTTACCTTGT+AGG 0.359838 1.2:+50979463 None:intergenic
ACTTCGTAATGATCGATATA+TGG 0.362032 1.2:-50980790 MS.gene068550:CDS
ACATGCACCTTTCTGGGTTG+TGG 0.366998 1.2:+50983664 None:intergenic
TACCTACCACTCTCTACCTT+TGG 0.370274 1.2:+50981974 None:intergenic
CTAGAGTATCCTTTAAATCT+AGG 0.370791 1.2:+50981272 None:intergenic
AAAGTTGCTGTTATTTCCTC+TGG 0.371025 1.2:+50981212 None:intergenic
TGTTAGAAGGAAATACATTA+TGG 0.371730 1.2:-50978380 MS.gene068550:CDS
ATTCATTGAACAGAAGTTCA+TGG 0.372969 1.2:-50981912 MS.gene068550:CDS
AGAGATGACATTGATGTAAT+AGG 0.373309 1.2:-50977955 MS.gene068550:CDS
TTCCTTGGTTCCCTAGCATC+TGG 0.374335 1.2:+50978037 None:intergenic
ACAACAATCTTTGACGATCT+TGG 0.374861 1.2:+50981560 None:intergenic
TTGATACGTCGCTAGGCGTT+TGG 0.375451 1.2:+50981886 None:intergenic
TCATGTAGAACCAACCAATA+TGG 0.376303 1.2:-50981714 MS.gene068550:CDS
CACCTTTCTGGGTTGTGGGC+GGG 0.379075 1.2:+50983669 None:intergenic
TGTTTCTGTGTTTGAAGATC+TGG 0.379454 1.2:-50978238 MS.gene068550:CDS
CGCTAGGCAGGCTGTCAAAA+CGG 0.380177 1.2:+50980994 None:intergenic
CATCATCCTCTACCTTTCCT+TGG 0.391677 1.2:+50978022 None:intergenic
ATGCTGACATGCACCTTTCT+GGG 0.392094 1.2:+50983658 None:intergenic
GTGATTTGACTACTTGTTCA+AGG 0.392537 1.2:-50978203 MS.gene068550:CDS
GCATTTCTCACCCATGGCTG+TGG 0.400191 1.2:+50978111 None:intergenic
GTGGAAATCTTCTAAACAAT+CGG 0.401053 1.2:-50982263 MS.gene068550:CDS
GGGTGAATCTTCTTCAAGAT+TGG 0.403956 1.2:+50980590 None:intergenic
CAGATTCCAACTTCAGCAAC+TGG 0.404643 1.2:+50978469 None:intergenic
AACACCTGGGGATCTTCTCT+TGG 0.405633 1.2:+50982186 None:intergenic
AGAGGAAATAACAGCAACTT+TGG 0.406142 1.2:-50981210 MS.gene068550:CDS
AAAGGTGCATGTCAGCATTT+GGG 0.408754 1.2:-50983653 MS.gene068550:CDS
ACCCCTTTCCAATCACATTC+CGG 0.411094 1.2:-50981737 MS.gene068550:CDS
ATTTCAATTTGAGGTCAGAT+AGG 0.413621 1.2:-50981676 MS.gene068550:CDS
AATTCTAGAAGCACAATATC+TGG 0.414534 1.2:-50980702 MS.gene068550:CDS
CATGCACCTTTCTGGGTTGT+GGG 0.419173 1.2:+50983665 None:intergenic
TGGTGCCAAAGGACCTTAAA+CGG 0.420078 1.2:-50980770 MS.gene068550:CDS
TGGGCCTTCTGAATCTTCTT+CGG 0.420630 1.2:-50980472 MS.gene068550:CDS
AGGAGCCTGAACCTCAAGAT+TGG 0.421532 1.2:+50980569 None:intergenic
GAAGGATCAAGAACAGAGAT+TGG 0.424727 1.2:+50979540 None:intergenic
ACCTACCACTCTCTACCTTT+GGG 0.426395 1.2:+50981975 None:intergenic
AGCCAATGTGCTGCTCCTGC+TGG 0.428930 1.2:+50981055 None:intergenic
TTCTGAGTTGGTTGAACCAC+TGG 0.431879 1.2:-50980931 MS.gene068550:CDS
GCTAGGCAGGCTGTCAAAAC+GGG 0.434829 1.2:+50980995 None:intergenic
TAGGAGGAGCTCAAGGGATC+AGG 0.437081 1.2:-50982032 MS.gene068550:CDS
GGTTGTGGGCGGGCTACTGG+GGG 0.437607 1.2:+50983679 None:intergenic
AGAATTTAAGGATGTATTTG+AGG 0.444098 1.2:-50982008 MS.gene068550:CDS
ATAGTTCAAGCAGTGCTTCT+GGG 0.448499 1.2:-50981244 MS.gene068550:CDS
GACGTATCAGCTGGTTCTAC+TGG 0.450301 1.2:-50979639 MS.gene068550:CDS
GTATCTTCTGAAATGTTAGA+AGG 0.450334 1.2:-50978393 MS.gene068550:CDS
TTGAACATGATTTCAATTTG+AGG 0.450676 1.2:-50981685 MS.gene068550:CDS
CAACAGGGGTGAATTACAAC+AGG 0.452060 1.2:-50981649 MS.gene068550:CDS
GTATTCATCTTCAGATTTGA+AGG 0.452350 1.2:-50981954 MS.gene068550:CDS
TATGGAGAACTGAAGATAGC+TGG 0.453058 1.2:-50978362 MS.gene068550:CDS
CTACATGACCGGAATGTGAT+TGG 0.453884 1.2:+50981729 None:intergenic
TTGGCTGCATTTCTCACCCA+TGG 0.454936 1.2:+50978105 None:intergenic
AGGTCAGATAGGGAGTCAAC+AGG 0.455232 1.2:-50981665 MS.gene068550:CDS
GTCTGTGCATTCACTGAAGC+AGG 0.455725 1.2:-50980664 MS.gene068550:CDS
CAGCATGGAGATTCATGTCC+AGG 0.460685 1.2:+50979585 None:intergenic
CTATGTCTATTTAAGTCAAA+CGG 0.461553 1.2:+50981182 None:intergenic
CTCTCTGAAGCACCTGTACC+TGG 0.463051 1.2:-50979603 MS.gene068550:CDS
TCTCCTGATTCTAGTTTCTC+CGG 0.466591 1.2:-50982514 MS.gene068550:CDS
AAAGGTAGAGGATGATGTCC+TGG 0.466697 1.2:-50978016 MS.gene068550:CDS
GACCGGAATGTGATTGGAAA+GGG 0.468052 1.2:+50981735 None:intergenic
CTAAAAGACCTTGCACTGTC+AGG 0.468134 1.2:+50981386 None:intergenic
TGTTTGAAGATCTGGAAGAT+AGG 0.481147 1.2:-50978230 MS.gene068550:CDS
GACAGCCTGCCTAGCGGGGA+AGG 0.481337 1.2:-50980987 MS.gene068550:CDS
TATCAAATGAAAACACTGTT+GGG 0.482329 1.2:-50980491 MS.gene068550:CDS
GAGGAAATAACAGCAACTTT+GGG 0.485008 1.2:-50981209 MS.gene068550:CDS
GCAACTCCAGTTGCTGAAGT+TGG 0.486560 1.2:-50978475 MS.gene068550:CDS
TCATAAACAGCAACAACATC+CGG 0.487223 1.2:-50982542 MS.gene068550:CDS
GCACCTTTCTGGGTTGTGGG+CGG 0.488125 1.2:+50983668 None:intergenic
GTACCCTTCATTCTCTTACC+AGG 0.488941 1.2:+50981017 None:intergenic
AGGTGTTATAGCTAGATTGA+TGG 0.492264 1.2:-50982170 MS.gene068550:CDS
CAACGGCGAACCTTCTGAGT+TGG 0.495337 1.2:-50980943 MS.gene068550:CDS
TGAAACCTTCCCCGCTAGGC+AGG 0.495785 1.2:+50980982 None:intergenic
CTAGAATCAGGAGAGAAATC+CGG 0.500407 1.2:+50982523 None:intergenic
CCACCGGAGAAACTAGAATC+AGG 0.500712 1.2:+50982511 None:intergenic
GATCGTCTAGGAGGAGCTCA+AGG 0.502385 1.2:-50982039 MS.gene068550:CDS
GACAGATCATCTGTAAAAGA+AGG 0.502791 1.2:+50979522 None:intergenic
ATTGGTTGGTTCTACATGAC+CGG 0.509610 1.2:+50981718 None:intergenic
AAGAGGTGCAAGGCACCAGC+AGG 0.509861 1.2:-50981070 MS.gene068550:CDS
CGAAGAAAATTCAATGCAAG+AGG 0.512210 1.2:-50980388 MS.gene068550:intron
CCTCACACGTGTCACTGCCT+TGG 0.513625 1.2:+50983741 None:intergenic
AAGACACGAGCCGATGATCC+AGG 0.514598 1.2:+50980438 None:intergenic
AAGCATCGCGATGGTTATCA+TGG 0.515516 1.2:-50981617 MS.gene068550:CDS
TTTCTCTGCAACCTTGCCAC+CGG 0.516407 1.2:+50982495 None:intergenic
GGAGCCTGAACCTCAAGATT+GGG 0.516857 1.2:+50980570 None:intergenic
TTCTAGTTTCTCCGGTGGCA+AGG 0.517530 1.2:-50982506 MS.gene068550:CDS
ATTATCAGAGAGGTGGAAGA+TGG 0.517782 1.2:-50981105 MS.gene068550:CDS
ATATTTCAGGACGTATCAGC+TGG 0.518195 1.2:-50979648 MS.gene068550:intron
GCTAGATTGATGGGTCTTGA+CGG 0.518416 1.2:-50982160 MS.gene068550:CDS
TCATTGAAACCTTCCCCGCT+AGG 0.518789 1.2:+50980978 None:intergenic
GCTGATATGCTAGCGTTCCC+TGG 0.518873 1.2:-50981035 MS.gene068550:CDS
GTATCAAATGAAAACACTGT+TGG 0.522003 1.2:-50980492 MS.gene068550:CDS
CTGGGTATCAGCAGCAAGGA+TGG 0.522721 1.2:-50980912 MS.gene068550:CDS
CTACTTGTTCAAGGTCTGAA+AGG 0.522940 1.2:-50978194 MS.gene068550:CDS
CCAACGCCTCAAGTGTATCA+TGG 0.523411 1.2:+50981840 None:intergenic
GTTGTCCTAAAACCTAATAT+GGG 0.523452 1.2:-50981542 MS.gene068550:CDS
CCATGATACACTTGAGGCGT+TGG 0.524158 1.2:-50981840 MS.gene068550:CDS
CATTTCTCACCCATGGCTGT+GGG 0.524711 1.2:+50978112 None:intergenic
ATCAATCTAGCTATAACACC+TGG 0.525093 1.2:+50982172 None:intergenic
AGCCCGCCCACAACCCAGAA+AGG 0.526197 1.2:-50983671 MS.gene068550:CDS
GGTGCCAAAGGACCTTAAAC+GGG 0.527205 1.2:-50980769 MS.gene068550:CDS
GGAGATTCATGTCCAGGTAC+AGG 0.532375 1.2:+50979591 None:intergenic
TGGAAATCTTCTAAACAATC+GGG 0.532665 1.2:-50982262 MS.gene068550:CDS
TTTATCTCTAAGGGGCTCAA+AGG 0.532888 1.2:+50980542 None:intergenic
TTTCAATTTGAGGTCAGATA+GGG 0.533938 1.2:-50981675 MS.gene068550:CDS
TATCTGGTCACAAGAAGTCT+TGG 0.534254 1.2:-50980686 MS.gene068550:CDS
ATCTACTGACCCACAGCCAT+GGG 0.534736 1.2:-50978121 MS.gene068550:CDS
CAAGGTTGCAGAGAAAGATT+CGG 0.535082 1.2:-50982488 MS.gene068550:intron
CCAAAGACAGTAGATGAAGC+AGG 0.535618 1.2:+50980843 None:intergenic
GGTGTTATAGCTAGATTGAT+GGG 0.536964 1.2:-50982169 MS.gene068550:CDS
TTCTGCTAAAATACTTCAAG+CGG 0.538802 1.2:-50981802 MS.gene068550:CDS
ATGATTAACGGGCTTCAAGA+TGG 0.541073 1.2:-50978066 MS.gene068550:CDS
TACCCTTCATTCTCTTACCA+GGG 0.542493 1.2:+50981018 None:intergenic
GGCAGTGACACGTGTGAGGA+AGG 0.544392 1.2:-50983737 MS.gene068550:CDS
TAAGGTTCTTCCTGGATCAT+CGG 0.545547 1.2:-50980448 MS.gene068550:CDS
TCAAAGTTCTCCATATTGGT+TGG 0.546294 1.2:+50981704 None:intergenic
GGTCAGATAGGGAGTCAACA+GGG 0.546327 1.2:-50981664 MS.gene068550:CDS
AGAAAATTATGCGGAGAACA+AGG 0.550019 1.2:+50981485 None:intergenic
CACCAGCAGGAGCAGCACAT+TGG 0.551873 1.2:-50981057 MS.gene068550:CDS
CCTCAATCAGCAACTTGCCC+AGG 0.553535 1.2:+50977998 None:intergenic
TAAATTTGCCTGACAGTGCA+AGG 0.555917 1.2:-50981394 MS.gene068550:CDS
CCTGGGCAAGTTGCTGATTG+AGG 0.558438 1.2:-50977998 MS.gene068550:CDS
AGCAGAGGAACGGCAAATGA+CGG 0.558914 1.2:-50982064 MS.gene068550:CDS
ATGGAGAACTGAAGATAGCT+GGG 0.559618 1.2:-50978361 MS.gene068550:CDS
TCATCTTCAGATTTGAAGGA+CGG 0.560308 1.2:-50981950 MS.gene068550:CDS
GTATCAGCAGCAAGGATGGT+TGG 0.563267 1.2:-50980908 MS.gene068550:CDS
TTGTTATTAGGCTGCTGAGA+TGG 0.565145 1.2:+50982133 None:intergenic
AATGATAAGTTTGCTCGCAA+CGG 0.566185 1.2:-50980960 MS.gene068550:CDS
GTTCCCTGGTAAGAGAATGA+AGG 0.568397 1.2:-50981021 MS.gene068550:CDS
AGAAGAGATTATCAGAGAGG+TGG 0.574106 1.2:-50981112 MS.gene068550:CDS
AATCTACTGACCCACAGCCA+TGG 0.575881 1.2:-50978122 MS.gene068550:CDS
AGTTGCTGATTGAGGAGTCT+CGG 0.577954 1.2:-50977990 MS.gene068550:CDS
ATCAAGAACAGAGATTGGAC+TGG 0.580851 1.2:+50979545 None:intergenic
GCCTAATAACAAGCAGCACA+AGG 0.581754 1.2:-50982122 MS.gene068550:CDS
AGTTCTCATTTAAATTTGGG+TGG 0.584733 1.2:-50982282 MS.gene068550:CDS
TCTGAGTTGGTTGAACCACT+GGG 0.584863 1.2:-50980930 MS.gene068550:CDS
CAAAGGACCTTAAACGGGAG+AGG 0.584910 1.2:-50980764 MS.gene068550:CDS
AGAAGATTCACCCAATCTTG+AGG 0.585560 1.2:-50980580 MS.gene068550:CDS
AGGTGGTGGTATGGTATCCA+AGG 0.585814 1.2:-50983758 None:intergenic
GTATCAGCTGGTTCTACTGG+TGG 0.588755 1.2:-50979636 MS.gene068550:CDS
TCCCAAAGGTAGAGAGTGGT+AGG 0.589898 1.2:-50981976 MS.gene068550:CDS
TTCCCTGGTAAGAGAATGAA+GGG 0.592385 1.2:-50981020 MS.gene068550:CDS
TGACCGGAATGTGATTGGAA+AGG 0.595190 1.2:+50981734 None:intergenic
TCAAGAACAGAGATTGGACT+GGG 0.595338 1.2:+50979546 None:intergenic
CTAGTTTCAAGTGACGAAGA+TGG 0.596738 1.2:-50978423 MS.gene068550:CDS
TGATCGATATATGGTGCCAA+AGG 0.596759 1.2:-50980781 MS.gene068550:CDS
AGGGAACCAAGGAAAGGTAG+AGG 0.597684 1.2:-50978028 MS.gene068550:CDS
TTCCAGATGCTAGGGAACCA+AGG 0.597921 1.2:-50978039 MS.gene068550:CDS
CAAATGACGGCCGATCGTCT+AGG 0.598475 1.2:-50982051 MS.gene068550:CDS
TGATCAGCATCTTTACAGCA+TGG 0.598824 1.2:+50979570 None:intergenic
TCAGCAGCAAGGATGGTTGG+AGG 0.599245 1.2:-50980905 MS.gene068550:CDS
GATTTAGTGGCAGAAATAGT+CGG 0.599671 1.2:-50977904 MS.gene068550:CDS
CAAAGAAGAGATTATCAGAG+AGG 0.605669 1.2:-50981115 MS.gene068550:CDS
TTCAAGTGACGAAGATGGCG+TGG 0.605966 1.2:-50978418 MS.gene068550:CDS
GAATCCAAGAGAAGATCCCC+AGG 0.606684 1.2:-50982190 MS.gene068550:CDS
GAAAATCTTGATACGTCGCT+AGG 0.608770 1.2:+50981879 None:intergenic
TCAATCTAGCTATAACACCT+GGG 0.609545 1.2:+50982173 None:intergenic
CAGCAGCAAGGATGGTTGGA+GGG 0.612392 1.2:-50980904 MS.gene068550:CDS
CATGTATTAGTAGTTTGTCA+AGG 0.613209 1.2:-50980878 MS.gene068550:CDS
TCAAACACAGAAACACTCAC+AGG 0.614246 1.2:+50978246 None:intergenic
AAGGTAGAGGATGATGTCCT+GGG 0.615193 1.2:-50978015 MS.gene068550:CDS
AGTGTCAGTGCTGACCTACA+AGG 0.615243 1.2:-50979477 MS.gene068550:intron
CTAGCATAGGTCCCTCCACA+TGG 0.618293 1.2:+50978442 None:intergenic
TGAATCATCTGTGAGTAGAG+AGG 0.619779 1.2:-50981138 MS.gene068550:CDS
TCGTCACTTGAAACTAGCAT+AGG 0.622726 1.2:+50978429 None:intergenic
TTGAGCTCCTCCTAGACGAT+CGG 0.626010 1.2:+50982041 None:intergenic
AAATTGCAAAGGAAGTAACT+AGG 0.628658 1.2:-50981340 MS.gene068550:CDS
GAGATCCCAAAGGTAGAGAG+TGG 0.629561 1.2:-50981980 MS.gene068550:CDS
TGACAATTCCTGAATTGATG+CGG 0.632177 1.2:+50978157 None:intergenic
CCTGATTCTAGTTTCTCCGG+TGG 0.633485 1.2:-50982511 MS.gene068550:CDS
GGAATCTAGAGAAATTGCAA+AGG 0.633666 1.2:-50981351 MS.gene068550:CDS
TGAGGCGTTGGACTCTAACA+AGG 0.635888 1.2:-50981828 MS.gene068550:CDS
TTTCATCAGAAGCATCGCGA+TGG 0.636867 1.2:-50981626 MS.gene068550:CDS
AAATCTTCTAAACAATCGGG+TGG 0.637998 1.2:-50982259 MS.gene068550:CDS
GATGCTAGGGAACCAAGGAA+AGG 0.644912 1.2:-50978034 MS.gene068550:CDS
ACACGTGTGAGGAAGGTGAG+AGG 0.646257 1.2:-50983730 MS.gene068550:CDS
GTATCCTTTAAATCTAGGAG+AGG 0.646624 1.2:+50981277 None:intergenic
GGAATCTGAAGACCATGTGG+AGG 0.646710 1.2:-50978454 MS.gene068550:CDS
AGTGGTTCAACCAACTCAGA+AGG 0.647689 1.2:+50980933 None:intergenic
ATGACGGCCGATCGTCTAGG+AGG 0.649553 1.2:-50982048 MS.gene068550:CDS
ATCGTCTAGGAGGAGCTCAA+GGG 0.651662 1.2:-50982038 MS.gene068550:CDS
ACCACTGGGTATCAGCAGCA+AGG 0.651868 1.2:-50980916 MS.gene068550:CDS
GATGGCACACAAGTCTCAAG+AGG 0.654613 1.2:-50981087 MS.gene068550:CDS
CACAAGTCTCAAGAGGTGCA+AGG 0.655382 1.2:-50981080 MS.gene068550:CDS
TCCTTGCTGCTGATACCCAG+TGG 0.657434 1.2:+50980915 None:intergenic
TTCTGGGAATGAATCTCCAG+AGG 0.661179 1.2:-50981228 MS.gene068550:CDS
CAAACACAGAAACACTCACA+GGG 0.661315 1.2:+50978247 None:intergenic
GAATCTGAAGACCATGTGGA+GGG 0.661775 1.2:-50978453 MS.gene068550:CDS
ACCGGAATGTGATTGGAAAG+GGG 0.664557 1.2:+50981736 None:intergenic
GTCAGATAGGGAGTCAACAG+GGG 0.667063 1.2:-50981663 MS.gene068550:CDS
CCAAGGCAGTGACACGTGTG+AGG 0.671197 1.2:-50983741 MS.gene068550:CDS
AAGAGTCTTGATCATAGACA+TGG 0.675010 1.2:-50980729 MS.gene068550:CDS
ACTTAAATAGACATAGCAGA+CGG 0.675436 1.2:-50981175 MS.gene068550:CDS
CAATCTAGCTATAACACCTG+GGG 0.676866 1.2:+50982174 None:intergenic
CAGGTACAGGTGCTTCAGAG+AGG 0.687176 1.2:+50979604 None:intergenic
TTATCCGAAGAAGATTCAGA+AGG 0.687645 1.2:+50980468 None:intergenic
TGCTGATTGAGGAGTCTCGG+TGG 0.702994 1.2:-50977987 MS.gene068550:CDS
GTTGGAATCTGAAGACCATG+TGG 0.720815 1.2:-50978457 MS.gene068550:CDS
AATATGGGAAAATTTCAGAG+TGG 0.723259 1.2:-50981527 MS.gene068550:CDS
TGTTCTGGCAGAAAATTATG+CGG 0.723663 1.2:+50981476 None:intergenic
TGAGGTCTCAGAGATCCCAA+AGG 0.724251 1.2:-50981990 MS.gene068550:CDS
AGAGTTCCATGATACACTTG+AGG 0.730462 1.2:-50981846 MS.gene068550:CDS
ACAGATGATTCACTAGAACG+CGG 0.780245 1.2:+50981149 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAGAAATGTATAAATAA+GGG + chr1.2:50981583-50981602 None:intergenic 10.0%
!! TAAAAATAACAAAAATAACA+CGG + chr1.2:50979291-50979310 None:intergenic 10.0%
!! TATTAAGAAATGTATAAATA+AGG + chr1.2:50981584-50981603 None:intergenic 10.0%
!!! AAATTTTATGAGAAATTATT+TGG + chr1.2:50981431-50981450 None:intergenic 10.0%
!!! ATTTTAATTTGATTTCATTA+AGG - chr1.2:50978658-50978677 MS.gene068550:intron 10.0%
!! AAAAAAAGCAGAAAAAAATT+TGG + chr1.2:50978789-50978808 None:intergenic 15.0%
!! AAAAAATAATCAAAATCTCA+AGG + chr1.2:50981714-50981733 None:intergenic 15.0%
!! AAATATTAATAGCAACAAAA+TGG + chr1.2:50981803-50981822 None:intergenic 15.0%
!! AATATTAATAGCAACAAAAT+GGG + chr1.2:50981802-50981821 None:intergenic 15.0%
!! ATAAACATATCAAAATAACA+TGG + chr1.2:50981295-50981314 None:intergenic 15.0%
!! ATGGTTAAATAATAAATTTG+TGG + chr1.2:50982613-50982632 None:intergenic 15.0%
!! AAAATGTATGATTAAGTCTA+AGG + chr1.2:50981850-50981869 None:intergenic 20.0%
!! AATATTTCAAAGTTCTGTTA+AGG - chr1.2:50981943-50981962 MS.gene068550:CDS 20.0%
!! ATATTTCAAAGTTCTGTTAA+GGG - chr1.2:50981944-50981963 MS.gene068550:CDS 20.0%
!! ATGTAAAGTTTCAAAAACAT+TGG - chr1.2:50981741-50981760 MS.gene068550:CDS 20.0%
!! CAATTATGAATCCAAATATA+AGG + chr1.2:50982253-50982272 None:intergenic 20.0%
!! GAAAAAGAAAAAGAAAATGT+AGG + chr1.2:50978205-50978224 None:intergenic 20.0%
!! GTAATATTAAACCCTATTTA+TGG - chr1.2:50982355-50982374 MS.gene068550:intron 20.0%
!! TAAAATTACTTCAATTTGCA+TGG - chr1.2:50982498-50982517 MS.gene068550:CDS 20.0%
!! TGAGAAATTATTTGGTTAAT+TGG + chr1.2:50981423-50981442 None:intergenic 20.0%
!! TGATATTGTTGTAATATTTC+AGG - chr1.2:50981984-50982003 MS.gene068550:CDS 20.0%
!! TTATTATTTAACCATAGCAA+GGG - chr1.2:50982618-50982637 MS.gene068550:intron 20.0%
!! TTTATTATTTAACCATAGCA+AGG - chr1.2:50982617-50982636 MS.gene068550:intron 20.0%
!! TTTGGATCAAAAATGATTAA+CGG - chr1.2:50983567-50983586 MS.gene068550:intron 20.0%
!!! ATAGCTAGAATTTAGAATAA+GGG - chr1.2:50979224-50979243 MS.gene068550:intron 20.0%
!!! ATTTTGAACTTCATTTAAGT+CGG + chr1.2:50981025-50981044 None:intergenic 20.0%
!!! TATAGCTAGAATTTAGAATA+AGG - chr1.2:50979223-50979242 MS.gene068550:intron 20.0%
!!! TATTGAATGAATCTAAAACA+TGG + chr1.2:50982763-50982782 None:intergenic 20.0%
!!! TGTTGTTTAATTCATTTTCA+GGG - chr1.2:50979069-50979088 MS.gene068550:intron 20.0%
!!! TTAATCATTTTTGATCCAAA+AGG + chr1.2:50983567-50983586 None:intergenic 20.0%
!!! TTGTTGTTTAATTCATTTTC+AGG - chr1.2:50979068-50979087 MS.gene068550:intron 20.0%
!!! TTTTATTATTGTCAAGAATG+TGG + chr1.2:50982483-50982502 None:intergenic 20.0%
! AACCTTTAACCTTCATATAT+AGG + chr1.2:50982385-50982404 None:intergenic 25.0%
! AATAACAGTTCATTACAACA+AGG + chr1.2:50983132-50983151 None:intergenic 25.0%
! AATGAACTGTTATTGTTGAT+AGG - chr1.2:50983138-50983157 MS.gene068550:intron 25.0%
! AGAATTTAAGGATGTATTTG+AGG - chr1.2:50979637-50979656 MS.gene068550:CDS 25.0%
! AGAGATGATTAAGTAACTAA+AGG + chr1.2:50982279-50982298 None:intergenic 25.0%
! ATATAGGATGTCCATAAATA+GGG + chr1.2:50982369-50982388 None:intergenic 25.0%
! ATATTGGACATCGAAATTAT+AGG + chr1.2:50978279-50978298 None:intergenic 25.0%
! ATCCTATATATGAAGGTTAA+AGG - chr1.2:50982380-50982399 MS.gene068550:intron 25.0%
! ATGAACTGTTATTGTTGATA+GGG - chr1.2:50983139-50983158 MS.gene068550:intron 25.0%
! CAGATAAAAGAACTAAGAAT+AGG + chr1.2:50981673-50981692 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG - chr1.2:50982774-50982793 MS.gene068550:intron 25.0%
! CTATGTCTATTTAAGTCAAA+CGG + chr1.2:50980466-50980485 None:intergenic 25.0%
! CTGATAATAATTTGGAAGTT+TGG - chr1.2:50983361-50983380 MS.gene068550:intron 25.0%
! TATATAGGATGTCCATAAAT+AGG + chr1.2:50982370-50982389 None:intergenic 25.0%
! TATCAAATGAAAACACTGTT+GGG - chr1.2:50981154-50981173 MS.gene068550:CDS 25.0%
! TATTGGACATCGAAATTATA+GGG + chr1.2:50978278-50978297 None:intergenic 25.0%
! TCAGCTAATAACTTCTTAAT+TGG + chr1.2:50979416-50979435 None:intergenic 25.0%
! TGCAGTTCTCATTTAAATTT+GGG - chr1.2:50979360-50979379 MS.gene068550:intron 25.0%
! TGCTCAAACTGATAATAATT+TGG - chr1.2:50983353-50983372 MS.gene068550:intron 25.0%
! TGTTAGAAGGAAATACATTA+TGG - chr1.2:50983265-50983284 MS.gene068550:intron 25.0%
! TTCATAACCAAAAGTGAAAA+AGG + chr1.2:50979196-50979215 None:intergenic 25.0%
! TTGAACATGATTTCAATTTG+AGG - chr1.2:50979960-50979979 MS.gene068550:intron 25.0%
! TTGCAGTTCTCATTTAAATT+TGG - chr1.2:50979359-50979378 MS.gene068550:intron 25.0%
! TTGGATCAAAAATGATTAAC+GGG - chr1.2:50983568-50983587 MS.gene068550:intron 25.0%
!! AAACAACACTTTTATCTCTA+AGG + chr1.2:50981116-50981135 None:intergenic 25.0%
!! AACAACACTTTTATCTCTAA+GGG + chr1.2:50981115-50981134 None:intergenic 25.0%
!! ATTGATAGTAGATGATTTAG+TGG - chr1.2:50983728-50983747 MS.gene068550:CDS 25.0%
!! ATTTTCCCATATTAGGTTTT+AGG + chr1.2:50980111-50980130 None:intergenic 25.0%
!! ATTTTGCACAATTGTTTAGA+TGG - chr1.2:50981819-50981838 MS.gene068550:CDS 25.0%
!! ATTTTGCTTATATTTGTGAC+CGG + chr1.2:50982739-50982758 None:intergenic 25.0%
!! TCAAACCTTTCATCAATTTT+TGG - chr1.2:50983006-50983025 MS.gene068550:intron 25.0%
!! TTTTGAACTTCATTTAAGTC+GGG + chr1.2:50981024-50981043 None:intergenic 25.0%
!! TTTTTGCTTATATTTGTGAC+CGG - chr1.2:50982848-50982867 MS.gene068550:intron 25.0%
!!! AGATTGATGACGTAATTATT+AGG + chr1.2:50982682-50982701 None:intergenic 25.0%
!!! GTTTTTTCCTTTTTCACTTT+TGG - chr1.2:50979186-50979205 MS.gene068550:intron 25.0%
!!! TACAGTTTTTTGATCATAGA+CGG - chr1.2:50982405-50982424 MS.gene068550:intron 25.0%
!!! TGCTTTTTTTAACTTTTCTG+CGG - chr1.2:50978799-50978818 MS.gene068550:intron 25.0%
AAAATTCAATGCAAGAGGTT+AGG - chr1.2:50981262-50981281 MS.gene068550:CDS 30.0%
AAACTACTAGAATCAATGCA+AGG + chr1.2:50978980-50978999 None:intergenic 30.0%
AAATTGCAAAGGAAGTAACT+AGG - chr1.2:50980305-50980324 MS.gene068550:intron 30.0%
AAATTGCCAAATCTATGATC+TGG - chr1.2:50981501-50981520 MS.gene068550:CDS 30.0%
AAGCTCCAAAAATTGATGAA+AGG + chr1.2:50983014-50983033 None:intergenic 30.0%
AATATGGGAAAATTTCAGAG+TGG - chr1.2:50980118-50980137 MS.gene068550:intron 30.0%
ACTTAAATAGACATAGCAGA+CGG - chr1.2:50980470-50980489 MS.gene068550:CDS 30.0%
ACTTCGTAATGATCGATATA+TGG - chr1.2:50980855-50980874 MS.gene068550:CDS 30.0%
AGAGATGACATTGATGTAAT+AGG - chr1.2:50983690-50983709 MS.gene068550:CDS 30.0%
AGATAGAGTAGAAACTAGAA+AGG + chr1.2:50978163-50978182 None:intergenic 30.0%
AGTTCTCATTTAAATTTGGG+TGG - chr1.2:50979363-50979382 MS.gene068550:intron 30.0%
ATGAAAAACAATCTGAGCAA+TGG - chr1.2:50980331-50980350 MS.gene068550:intron 30.0%
ATGAATCCAAATATAAGGTG+AGG + chr1.2:50982248-50982267 None:intergenic 30.0%
ATGGTATGTAATGTAGAAAG+TGG - chr1.2:50982526-50982545 MS.gene068550:CDS 30.0%
ATGTTCAAAGTTCTCCATAT+TGG + chr1.2:50979948-50979967 None:intergenic 30.0%
ATTCATTGAACAGAAGTTCA+TGG - chr1.2:50979733-50979752 MS.gene068550:intron 30.0%
CAACAAGGAAACCAAAAAAA+AGG + chr1.2:50983117-50983136 None:intergenic 30.0%
GAAATTATAGGGAAAAAGTG+TGG + chr1.2:50978267-50978286 None:intergenic 30.0%
GATAGAGTAGAAACTAGAAA+GGG + chr1.2:50978162-50978181 None:intergenic 30.0%
GTATCAAATGAAAACACTGT+TGG - chr1.2:50981153-50981172 MS.gene068550:CDS 30.0%
GTATTCATCTTCAGATTTGA+AGG - chr1.2:50979691-50979710 MS.gene068550:intron 30.0%
GTGGAAATCTTCTAAACAAT+CGG - chr1.2:50979382-50979401 MS.gene068550:intron 30.0%
GTGTTGAACTCAATATCTAA+TGG - chr1.2:50981523-50981542 MS.gene068550:CDS 30.0%
GTTGTCCTAAAACCTAATAT+GGG - chr1.2:50980103-50980122 MS.gene068550:intron 30.0%
TATGGACATCCTATATATGA+AGG - chr1.2:50982373-50982392 MS.gene068550:intron 30.0%
TGGAAATCTTCTAAACAATC+GGG - chr1.2:50979383-50979402 MS.gene068550:intron 30.0%
TGTATATACTAAGACCTCAA+AGG + chr1.2:50982712-50982731 None:intergenic 30.0%
TGTTGTCCTAAAACCTAATA+TGG - chr1.2:50980102-50980121 MS.gene068550:intron 30.0%
TGTTTCGTTTAACAGTTGAT+TGG - chr1.2:50983050-50983069 MS.gene068550:intron 30.0%
TTCTCAACGATCAATTATTC+TGG - chr1.2:50981898-50981917 MS.gene068550:CDS 30.0%
TTCTGCTAAAATACTTCAAG+CGG - chr1.2:50979843-50979862 MS.gene068550:intron 30.0%
TTGTTAAGATATACATCCTC+CGG + chr1.2:50982870-50982889 None:intergenic 30.0%
! AATTCTAGAAGCACAATATC+TGG - chr1.2:50980943-50980962 MS.gene068550:CDS 30.0%
! ACAACACTTTTATCTCTAAG+GGG + chr1.2:50981114-50981133 None:intergenic 30.0%
! ACATTTTGTGAAGTTATCAG+AGG - chr1.2:50981863-50981882 MS.gene068550:CDS 30.0%
! ATTTCAATTTGAGGTCAGAT+AGG - chr1.2:50979969-50979988 MS.gene068550:intron 30.0%
! CATGTATTAGTAGTTTGTCA+AGG - chr1.2:50980767-50980786 MS.gene068550:CDS 30.0%
! CATTTTTGATCCAAAAGGTT+TGG + chr1.2:50983562-50983581 None:intergenic 30.0%
! CTAGAGTATCCTTTAAATCT+AGG + chr1.2:50980376-50980395 None:intergenic 30.0%
! CTTTTATCTGATCATCATAC+AGG - chr1.2:50981683-50981702 MS.gene068550:CDS 30.0%
! TAATTGGCTTATGTGATATG+AGG + chr1.2:50981407-50981426 None:intergenic 30.0%
! TTTCAATTTGAGGTCAGATA+GGG - chr1.2:50979970-50979989 MS.gene068550:intron 30.0%
!! GTATCTTCTGAAATGTTAGA+AGG - chr1.2:50983252-50983271 MS.gene068550:intron 30.0%
!! GTGAGATTTAATTTTGTCCA+TGG + chr1.2:50978399-50978418 None:intergenic 30.0%
!! TCATCTTGTTCTGAATGTTT+TGG - chr1.2:50982144-50982163 MS.gene068550:CDS 30.0%
!! TGCTTTTTAAACAAAGAGTC+TGG + chr1.2:50979869-50979888 None:intergenic 30.0%
!!! CTCTGAAATTTTCCCATATT+AGG + chr1.2:50980118-50980137 None:intergenic 30.0%
!!! TGATGTTTGTGCCTTTTTTT+TGG - chr1.2:50983103-50983122 MS.gene068550:intron 30.0%
!!! TTTTTTTAACTTTTCTGCGG+TGG - chr1.2:50978802-50978821 MS.gene068550:intron 30.0%
AAATCTTCTAAACAATCGGG+TGG - chr1.2:50979386-50979405 MS.gene068550:intron 35.0%
AAGAATGTGGCAAGCTAAAA+AGG + chr1.2:50982470-50982489 None:intergenic 35.0%
AAGAGTCTTGATCATAGACA+TGG - chr1.2:50980916-50980935 MS.gene068550:CDS 35.0%
AAGCAGACAAAAGACAAGAA+AGG + chr1.2:50981635-50981654 None:intergenic 35.0%
AAGGGATCAGGAAGAATTTA+AGG - chr1.2:50979625-50979644 MS.gene068550:CDS 35.0%
ACAACAATCTTTGACGATCT+TGG + chr1.2:50980088-50980107 None:intergenic 35.0%
ACCTATTGATGTCTATGGTA+TGG + chr1.2:50982324-50982343 None:intergenic 35.0%
AGAAAATTATGCGGAGAACA+AGG + chr1.2:50980163-50980182 None:intergenic 35.0%
AGAGGAAATAACAGCAACTT+TGG - chr1.2:50980435-50980454 MS.gene068550:CDS 35.0%
AGCAACAAATTCATTTGTGC+TGG + chr1.2:50982963-50982982 None:intergenic 35.0%
ATCAATCTAGCTATAACACC+TGG + chr1.2:50979476-50979495 None:intergenic 35.0%
CAAAGAAGAGATTATCAGAG+AGG - chr1.2:50980530-50980549 MS.gene068550:CDS 35.0%
CATTAATGGAGAGACGTTAT+TGG + chr1.2:50978096-50978115 None:intergenic 35.0%
CGAAGAAAATTCAATGCAAG+AGG - chr1.2:50981257-50981276 MS.gene068550:CDS 35.0%
GACAGATCATCTGTAAAAGA+AGG + chr1.2:50982126-50982145 None:intergenic 35.0%
GAGGAAATAACAGCAACTTT+GGG - chr1.2:50980436-50980455 MS.gene068550:CDS 35.0%
GATTTAGTGGCAGAAATAGT+CGG - chr1.2:50983741-50983760 MS.gene068550:CDS 35.0%
GGAAATTATGAGAAAACACG+TGG + chr1.2:50982303-50982322 None:intergenic 35.0%
GGAATCTAGAGAAATTGCAA+AGG - chr1.2:50980294-50980313 MS.gene068550:intron 35.0%
GGAGAATAGTGAGGTAATAT+TGG + chr1.2:50978295-50978314 None:intergenic 35.0%
GTATCCTTTAAATCTAGGAG+AGG + chr1.2:50980371-50980390 None:intergenic 35.0%
GTGATTTGACTACTTGTTCA+AGG - chr1.2:50983442-50983461 MS.gene068550:intron 35.0%
TAGTCACCTATTGATGTCTA+TGG + chr1.2:50982329-50982348 None:intergenic 35.0%
TCAAAGTTCTCCATATTGGT+TGG + chr1.2:50979944-50979963 None:intergenic 35.0%
TCAACACCAGATCATAGATT+TGG + chr1.2:50981510-50981529 None:intergenic 35.0%
TCAATCTAGCTATAACACCT+GGG + chr1.2:50979475-50979494 None:intergenic 35.0%
TCAATCTCTTAATGCCTTTG+AGG - chr1.2:50982695-50982714 MS.gene068550:intron 35.0%
TCATAAACAGCAACAACATC+CGG - chr1.2:50979103-50979122 MS.gene068550:intron 35.0%
TCATCTTCAGATTTGAAGGA+CGG - chr1.2:50979695-50979714 MS.gene068550:intron 35.0%
TCATGTAGAACCAACCAATA+TGG - chr1.2:50979931-50979950 MS.gene068550:intron 35.0%
TCCATACCATAGACATCAAT+AGG - chr1.2:50982320-50982339 MS.gene068550:intron 35.0%
TCTTCCTCTCCTAGATTTAA+AGG - chr1.2:50980364-50980383 MS.gene068550:intron 35.0%
TGACAATTCCTGAATTGATG+CGG + chr1.2:50983491-50983510 None:intergenic 35.0%
TGTAGACCTCACCTTATATT+TGG - chr1.2:50982239-50982258 MS.gene068550:CDS 35.0%
TGTTCTGGCAGAAAATTATG+CGG + chr1.2:50980172-50980191 None:intergenic 35.0%
TGTTTGAAGATCTGGAAGAT+AGG - chr1.2:50983415-50983434 MS.gene068550:intron 35.0%
TTAGAGAAAAATCGAAGCAG+AGG - chr1.2:50979566-50979585 MS.gene068550:CDS 35.0%
TTATCCGAAGAAGATTCAGA+AGG + chr1.2:50981180-50981199 None:intergenic 35.0%
TTCAATTTGCATGGTAGTCA+TGG - chr1.2:50982507-50982526 MS.gene068550:CDS 35.0%
TTCTGAATCTTCTTCGGATA+AGG - chr1.2:50981179-50981198 MS.gene068550:CDS 35.0%
TTGAGAATTGAAGCTGAAAC+TGG + chr1.2:50978491-50978510 None:intergenic 35.0%
TTTGGCAATTTCATAGCTAG+AGG + chr1.2:50981492-50981511 None:intergenic 35.0%
! AATGATAAGTTTGCTCGCAA+CGG - chr1.2:50980685-50980704 MS.gene068550:CDS 35.0%
! AGGTGTTATAGCTAGATTGA+TGG - chr1.2:50979475-50979494 MS.gene068550:intron 35.0%
! CATAATTTTCTGCCAGAACA+TGG - chr1.2:50980172-50980191 MS.gene068550:intron 35.0%
! CTGCTTCGATTTTTCTCTAA+AGG + chr1.2:50979566-50979585 None:intergenic 35.0%
! GGTGTTATAGCTAGATTGAT+GGG - chr1.2:50979476-50979495 MS.gene068550:intron 35.0%
! GTCTTTTAGGCACAATTCTT+TGG - chr1.2:50980273-50980292 MS.gene068550:intron 35.0%
! TGTTTCTGTGTTTGAAGATC+TGG - chr1.2:50983407-50983426 MS.gene068550:intron 35.0%
!! AAAGTTGCTGTTATTTCCTC+TGG + chr1.2:50980436-50980455 None:intergenic 35.0%
!! AGTAGTGGGTAAGAATAATG+TGG + chr1.2:50978128-50978147 None:intergenic 35.0%
!! ATTTAATTTTGTCCATGGCG+AGG + chr1.2:50978394-50978413 None:intergenic 35.0%
ACAGATGATTCACTAGAACG+CGG + chr1.2:50980499-50980518 None:intergenic 40.0%
AGAAGAAAAACCCTAAGAGG+AGG + chr1.2:50978325-50978344 None:intergenic 40.0%
AGAAGAGATTATCAGAGAGG+TGG - chr1.2:50980533-50980552 MS.gene068550:CDS 40.0%
AGAAGATTCACCCAATCTTG+AGG - chr1.2:50981065-50981084 MS.gene068550:CDS 40.0%
AGAGACGTTATTGGAAGAGT+GGG + chr1.2:50978087-50978106 None:intergenic 40.0%
AGAGTTCCATGATACACTTG+AGG - chr1.2:50979799-50979818 MS.gene068550:intron 40.0%
ATAGTTCAAGCAGTGCTTCT+GGG - chr1.2:50980401-50980420 MS.gene068550:CDS 40.0%
ATATTTCAGGACGTATCAGC+TGG - chr1.2:50981997-50982016 MS.gene068550:CDS 40.0%
ATCAAGAACAGAGATTGGAC+TGG + chr1.2:50982103-50982122 None:intergenic 40.0%
ATGGAGAACTGAAGATAGCT+GGG - chr1.2:50983284-50983303 MS.gene068550:intron 40.0%
ATTATCAGAGAGGTGGAAGA+TGG - chr1.2:50980540-50980559 MS.gene068550:CDS 40.0%
CAAACACAGAAACACTCACA+GGG + chr1.2:50983401-50983420 None:intergenic 40.0%
CAAGGTTGCAGAGAAAGATT+CGG - chr1.2:50979157-50979176 MS.gene068550:intron 40.0%
CAATCTAGCTATAACACCTG+GGG + chr1.2:50979474-50979493 None:intergenic 40.0%
CTACTTGTTCAAGGTCTGAA+AGG - chr1.2:50983451-50983470 MS.gene068550:intron 40.0%
CTAGAATCAGGAGAGAAATC+CGG + chr1.2:50979125-50979144 None:intergenic 40.0%
GAAAAATCGAAGCAGAGGAA+CGG - chr1.2:50979571-50979590 MS.gene068550:CDS 40.0%
GAAAATCTTGATACGTCGCT+AGG + chr1.2:50979769-50979788 None:intergenic 40.0%
GAAGGATCAAGAACAGAGAT+TGG + chr1.2:50982108-50982127 None:intergenic 40.0%
GAGAGAAGAAAAACCCTAAG+AGG + chr1.2:50978328-50978347 None:intergenic 40.0%
GGGTGAATCTTCTTCAAGAT+TGG + chr1.2:50981058-50981077 None:intergenic 40.0%
GTCTTAGTATATACACCCTC+CGG - chr1.2:50982717-50982736 MS.gene068550:intron 40.0%
TAAATTTGCCTGACAGTGCA+AGG - chr1.2:50980251-50980270 MS.gene068550:intron 40.0%
TAAGGTTCTTCCTGGATCAT+CGG - chr1.2:50981197-50981216 MS.gene068550:CDS 40.0%
TACCCTTCATTCTCTTACCA+GGG + chr1.2:50980630-50980649 None:intergenic 40.0%
TATCTGGTCACAAGAAGTCT+TGG - chr1.2:50980959-50980978 MS.gene068550:CDS 40.0%
TATGGAGAACTGAAGATAGC+TGG - chr1.2:50983283-50983302 MS.gene068550:intron 40.0%
TCAAACACAGAAACACTCAC+AGG + chr1.2:50983402-50983421 None:intergenic 40.0%
TCAAGAACAGAGATTGGACT+GGG + chr1.2:50982102-50982121 None:intergenic 40.0%
TCAGCATGATTTCCATGTTC+TGG + chr1.2:50980187-50980206 None:intergenic 40.0%
TCGTCACTTGAAACTAGCAT+AGG + chr1.2:50983219-50983238 None:intergenic 40.0%
TGAATCATCTGTGAGTAGAG+AGG - chr1.2:50980507-50980526 MS.gene068550:CDS 40.0%
TGATCAGCATCTTTACAGCA+TGG + chr1.2:50982078-50982097 None:intergenic 40.0%
TGCTTATATTTGTGACCGGA+GGG + chr1.2:50982871-50982852 None:intergenic 40.0%
TTCCCTGGTAAGAGAATGAA+GGG - chr1.2:50980625-50980644 MS.gene068550:CDS 40.0%
TTGCTTATATTTGTGACCGG+AGG - chr1.2:50982851-50982870 MS.gene068550:intron 40.0%
TTGCTTATATTTGTGACCGG+AGG + chr1.2:50982870-50982851 None:intergenic 40.0%
! AAAGGTGCATGTCAGCATTT+GGG - chr1.2:50977992-50978011 MS.gene068550:CDS 40.0%
! AGAAATGCAGCCAAACCTTT+TGG - chr1.2:50983549-50983568 MS.gene068550:intron 40.0%
! ATAGCAAGGGTGTGTTTCAT+GGG - chr1.2:50982631-50982650 MS.gene068550:intron 40.0%
! ATGGTCTTTTCCAGATGCTA+GGG - chr1.2:50983598-50983617 MS.gene068550:intron 40.0%
! CTAGTTTCAAGTGACGAAGA+TGG - chr1.2:50983222-50983241 MS.gene068550:intron 40.0%
! GAAAGGTTTGAAGCAGAAGA+TGG + chr1.2:50982997-50983016 None:intergenic 40.0%
! TAACTTTTCTGCGGTGGTAT+CGG - chr1.2:50978808-50978827 MS.gene068550:intron 40.0%
! TGATCGATATATGGTGCCAA+AGG - chr1.2:50980864-50980883 MS.gene068550:CDS 40.0%
! TTGTTATTAGGCTGCTGAGA+TGG + chr1.2:50979515-50979534 None:intergenic 40.0%
! TTTATCTCTAAGGGGCTCAA+AGG + chr1.2:50981106-50981125 None:intergenic 40.0%
!! ATGATTAACGGGCTTCAAGA+TGG - chr1.2:50983579-50983598 MS.gene068550:intron 40.0%
!! ATTGGTTGGTTCTACATGAC+CGG + chr1.2:50979930-50979949 None:intergenic 40.0%
!! TCCTTGTGCTGCTTGTTATT+AGG + chr1.2:50979527-50979546 None:intergenic 40.0%
!! TCTCCTGATTCTAGTTTCTC+CGG - chr1.2:50979131-50979150 MS.gene068550:intron 40.0%
!! TGTGGAGAGAGAAGCATTAA+TGG + chr1.2:50978110-50978129 None:intergenic 40.0%
AAAGGTAGAGGATGATGTCC+TGG - chr1.2:50983629-50983648 MS.gene068550:intron 45.0%
AAGGTAGAGGATGATGTCCT+GGG - chr1.2:50983630-50983649 MS.gene068550:intron 45.0%
AATGCTGACATGCACCTTTC+TGG + chr1.2:50977991-50978010 None:intergenic 45.0%
ACCCCTTTCCAATCACATTC+CGG - chr1.2:50979908-50979927 MS.gene068550:intron 45.0%
ACCGGAATGTGATTGGAAAG+GGG + chr1.2:50979912-50979931 None:intergenic 45.0%
ACCTACCACTCTCTACCTTT+GGG + chr1.2:50979673-50979692 None:intergenic 45.0%
ACCTTGAGGAAGATGAAGCT+TGG + chr1.2:50978432-50978451 None:intergenic 45.0%
AGAAAAACCCTAAGAGGAGG+AGG + chr1.2:50978322-50978341 None:intergenic 45.0%
AGAAATGACGCAGATCGAGA+AGG + chr1.2:50978356-50978375 None:intergenic 45.0%
AGGGTGTGTAGTAGTAGTAG+TGG + chr1.2:50978143-50978162 None:intergenic 45.0%
AGTGGTTCAACCAACTCAGA+AGG + chr1.2:50980715-50980734 None:intergenic 45.0%
ATGCTGACATGCACCTTTCT+GGG + chr1.2:50977990-50978009 None:intergenic 45.0%
CAACAGGGGTGAATTACAAC+AGG - chr1.2:50979996-50980015 MS.gene068550:intron 45.0%
CAGATTCCAACTTCAGCAAC+TGG + chr1.2:50983179-50983198 None:intergenic 45.0%
CATCATCCTCTACCTTTCCT+TGG + chr1.2:50983626-50983645 None:intergenic 45.0%
CATGAAACACACCCTTGCTA+TGG + chr1.2:50982632-50982651 None:intergenic 45.0%
CCAAAGACAGTAGATGAAGC+AGG + chr1.2:50980805-50980824 None:intergenic 45.0%
CCTGCTTCATCTACTGTCTT+TGG - chr1.2:50980802-50980821 MS.gene068550:CDS 45.0%
CTAAAAGACCTTGCACTGTC+AGG + chr1.2:50980262-50980281 None:intergenic 45.0%
CTACATGACCGGAATGTGAT+TGG + chr1.2:50979919-50979938 None:intergenic 45.0%
CTTCTCTTGGATTCAGTTGC+TGG + chr1.2:50979449-50979468 None:intergenic 45.0%
GAATCTGAAGACCATGTGGA+GGG - chr1.2:50983192-50983211 MS.gene068550:intron 45.0%
GACCGGAATGTGATTGGAAA+GGG + chr1.2:50979913-50979932 None:intergenic 45.0%
GAGAGACGTTATTGGAAGAG+TGG + chr1.2:50978088-50978107 None:intergenic 45.0%
GATAGTTCAAGCAGTGCTTC+TGG - chr1.2:50980400-50980419 MS.gene068550:CDS 45.0%
GATGAAGCTTGGAGTTGTTG+CGG + chr1.2:50978421-50978440 None:intergenic 45.0%
GCCTAATAACAAGCAGCACA+AGG - chr1.2:50979523-50979542 MS.gene068550:CDS 45.0%
GGGTGTGTAGTAGTAGTAGT+GGG + chr1.2:50978142-50978161 None:intergenic 45.0%
GTACCCTTCATTCTCTTACC+AGG + chr1.2:50980631-50980650 None:intergenic 45.0%
GTTCCCTGGTAAGAGAATGA+AGG - chr1.2:50980624-50980643 MS.gene068550:CDS 45.0%
GTTGGAATCTGAAGACCATG+TGG - chr1.2:50983188-50983207 MS.gene068550:intron 45.0%
TACCTACCACTCTCTACCTT+TGG + chr1.2:50979674-50979693 None:intergenic 45.0%
TCAGCACGCAAGAATGTTCT+AGG + chr1.2:50980832-50980851 None:intergenic 45.0%
TCCAAGCTTCATCTTCCTCA+AGG - chr1.2:50978428-50978447 MS.gene068550:CDS 45.0%
TCTTCGGATAAGGTTCTTCC+TGG - chr1.2:50981189-50981208 MS.gene068550:CDS 45.0%
TCTTTCATGATTCCTCGCCA+TGG - chr1.2:50978379-50978398 MS.gene068550:CDS 45.0%
TGACCGGAATGTGATTGGAA+AGG + chr1.2:50979914-50979933 None:intergenic 45.0%
TGGGCCTTCTGAATCTTCTT+CGG - chr1.2:50981173-50981192 MS.gene068550:CDS 45.0%
TTCACCCAATCTTGAGGTTC+AGG - chr1.2:50981071-50981090 MS.gene068550:CDS 45.0%
TTGCGCAAAACGTGTAGTGA+AGG + chr1.2:50981608-50981627 None:intergenic 45.0%
! AAGCATCGCGATGGTTATCA+TGG - chr1.2:50980028-50980047 MS.gene068550:intron 45.0%
! AGTTGCTGATTGAGGAGTCT+CGG - chr1.2:50983655-50983674 MS.gene068550:CDS 45.0%
! CATAGCAAGGGTGTGTTTCA+TGG - chr1.2:50982630-50982649 MS.gene068550:intron 45.0%
! CTGACAGTGCAAGGTCTTTT+AGG - chr1.2:50980260-50980279 MS.gene068550:intron 45.0%
! CTTTTCGACCGCATCAATTC+AGG - chr1.2:50983480-50983499 MS.gene068550:intron 45.0%
! GAAAAAGTGTGGAGCGTGAT+AGG + chr1.2:50978256-50978275 None:intergenic 45.0%
! GAAAGGTGCATGTCAGCATT+TGG - chr1.2:50977991-50978010 MS.gene068550:CDS 45.0%
! GATGGTCTTTTCCAGATGCT+AGG - chr1.2:50983597-50983616 MS.gene068550:intron 45.0%
! GCTAGATTGATGGGTCTTGA+CGG - chr1.2:50979485-50979504 MS.gene068550:CDS 45.0%
! TCGCACGTCTTTTGTCGAAT+TGG + chr1.2:50980054-50980073 None:intergenic 45.0%
! TCGGCTCGTGTCTTAGTAAA+AGG - chr1.2:50981216-50981235 MS.gene068550:CDS 45.0%
! TGGTGCCAAAGGACCTTAAA+CGG - chr1.2:50980875-50980894 MS.gene068550:CDS 45.0%
! TTCTGGGAATGAATCTCCAG+AGG - chr1.2:50980417-50980436 MS.gene068550:CDS 45.0%
!! TCTGAGTTGGTTGAACCACT+GGG - chr1.2:50980715-50980734 MS.gene068550:CDS 45.0%
!! TTCTGAGTTGGTTGAACCAC+TGG - chr1.2:50980714-50980733 MS.gene068550:CDS 45.0%
!! TTTCATCAGAAGCATCGCGA+TGG - chr1.2:50980019-50980038 MS.gene068550:intron 45.0%
AAAACCCTAAGAGGAGGAGG+AGG + chr1.2:50978319-50978338 None:intergenic 50.0%
AACACCTGGGGATCTTCTCT+TGG + chr1.2:50979462-50979481 None:intergenic 50.0%
AATCTACTGACCCACAGCCA+TGG - chr1.2:50983523-50983542 MS.gene068550:intron 50.0%
ACATGCACCTTTCTGGGTTG+TGG + chr1.2:50977984-50978003 None:intergenic 50.0%
AGAGAGAGAGAGTGACCTTG+AGG + chr1.2:50978446-50978465 None:intergenic 50.0%
AGAGAGAGGTGAGAGAGTGA+GGG + chr1.2:50978058-50978077 None:intergenic 50.0%
AGCAGAGGAACGGCAAATGA+CGG - chr1.2:50979581-50979600 MS.gene068550:CDS 50.0%
AGGAGCCTGAACCTCAAGAT+TGG + chr1.2:50981079-50981098 None:intergenic 50.0%
AGGGAACCAAGGAAAGGTAG+AGG - chr1.2:50983617-50983636 MS.gene068550:intron 50.0%
AGGTCAGATAGGGAGTCAAC+AGG - chr1.2:50979980-50979999 MS.gene068550:intron 50.0%
ATCGTCTAGGAGGAGCTCAA+GGG - chr1.2:50979607-50979626 MS.gene068550:CDS 50.0%
ATCTACTGACCCACAGCCAT+GGG - chr1.2:50983524-50983543 MS.gene068550:intron 50.0%
CAAAGGACCTTAAACGGGAG+AGG - chr1.2:50980881-50980900 MS.gene068550:CDS 50.0%
CAGCATGGAGATTCATGTCC+AGG + chr1.2:50982063-50982082 None:intergenic 50.0%
CATGCACCTTTCTGGGTTGT+GGG + chr1.2:50977983-50978002 None:intergenic 50.0%
CATTTCTCACCCATGGCTGT+GGG + chr1.2:50983536-50983555 None:intergenic 50.0%
CCAACGCCTCAAGTGTATCA+TGG + chr1.2:50979808-50979827 None:intergenic 50.0%
CCACCGGAGAAACTAGAATC+AGG + chr1.2:50979137-50979156 None:intergenic 50.0%
CCATGATACACTTGAGGCGT+TGG - chr1.2:50979805-50979824 MS.gene068550:intron 50.0%
CTAAGGGGCTCAAAGGTTTC+AGG + chr1.2:50981099-50981118 None:intergenic 50.0%
CTCTTCTCCTCTCCCGTTTA+AGG + chr1.2:50980891-50980910 None:intergenic 50.0%
GAATCCAAGAGAAGATCCCC+AGG - chr1.2:50979455-50979474 MS.gene068550:intron 50.0%
GAGATCCCAAAGGTAGAGAG+TGG - chr1.2:50979665-50979684 MS.gene068550:intron 50.0%
GATGCTAGGGAACCAAGGAA+AGG - chr1.2:50983611-50983630 MS.gene068550:intron 50.0%
GATGGCACACAAGTCTCAAG+AGG - chr1.2:50980558-50980577 MS.gene068550:CDS 50.0%
GCAACTCCAGTTGCTGAAGT+TGG - chr1.2:50983170-50983189 MS.gene068550:intron 50.0%
GGAATCTGAAGACCATGTGG+AGG - chr1.2:50983191-50983210 MS.gene068550:intron 50.0%
GGAGATTCATGTCCAGGTAC+AGG + chr1.2:50982057-50982076 None:intergenic 50.0%
GGAGCCTGAACCTCAAGATT+GGG + chr1.2:50981078-50981097 None:intergenic 50.0%
GGTCAGATAGGGAGTCAACA+GGG - chr1.2:50979981-50980000 MS.gene068550:intron 50.0%
GGTGCCAAAGGACCTTAAAC+GGG - chr1.2:50980876-50980895 MS.gene068550:CDS 50.0%
GTATCAGCAGCAAGGATGGT+TGG - chr1.2:50980737-50980756 MS.gene068550:CDS 50.0%
GTCAGATAGGGAGTCAACAG+GGG - chr1.2:50979982-50980001 MS.gene068550:intron 50.0%
GTCTGTGCATTCACTGAAGC+AGG - chr1.2:50980981-50981000 MS.gene068550:CDS 50.0%
TCATTGAAACCTTCCCCGCT+AGG + chr1.2:50980670-50980689 None:intergenic 50.0%
TCCCAAAGGTAGAGAGTGGT+AGG - chr1.2:50979669-50979688 MS.gene068550:intron 50.0%
TGAGGTCTCAGAGATCCCAA+AGG - chr1.2:50979655-50979674 MS.gene068550:intron 50.0%
TTCAAGTGACGAAGATGGCG+TGG - chr1.2:50983227-50983246 MS.gene068550:intron 50.0%
TTCCAGATGCTAGGGAACCA+AGG - chr1.2:50983606-50983625 MS.gene068550:intron 50.0%
TTCCTTGGTTCCCTAGCATC+TGG + chr1.2:50983611-50983630 None:intergenic 50.0%
TTGAGCTCCTCCTAGACGAT+CGG + chr1.2:50979607-50979626 None:intergenic 50.0%
TTGATACGTCGCTAGGCGTT+TGG + chr1.2:50979762-50979781 None:intergenic 50.0%
TTGGCTGCATTTCTCACCCA+TGG + chr1.2:50983543-50983562 None:intergenic 50.0%
TTTCTCTGCAACCTTGCCAC+CGG + chr1.2:50979153-50979172 None:intergenic 50.0%
! CACAAGTCTCAAGAGGTGCA+AGG - chr1.2:50980565-50980584 MS.gene068550:CDS 50.0%
! CTCTCCCGTTTAAGGTCCTT+TGG + chr1.2:50980883-50980902 None:intergenic 50.0%
!! AGTGTCAGTGCTGACCTACA+AGG - chr1.2:50982168-50982187 MS.gene068550:CDS 50.0%
!! CAGTGCTGACCTACAAGGTA+AGG - chr1.2:50982173-50982192 MS.gene068550:CDS 50.0%
!! CCTGATTCTAGTTTCTCCGG+TGG - chr1.2:50979134-50979153 MS.gene068550:intron 50.0%
!! GACGTATCAGCTGGTTCTAC+TGG - chr1.2:50982006-50982025 MS.gene068550:CDS 50.0%
!! GTATCAGCTGGTTCTACTGG+TGG - chr1.2:50982009-50982028 MS.gene068550:CDS 50.0%
!! TGAGGCGTTGGACTCTAACA+AGG - chr1.2:50979817-50979836 MS.gene068550:intron 50.0%
!! TTCTAGTTTCTCCGGTGGCA+AGG - chr1.2:50979139-50979158 MS.gene068550:intron 50.0%
AAGACACGAGCCGATGATCC+AGG + chr1.2:50981210-50981229 None:intergenic 55.0%
ACACGTGTGAGGAAGGTGAG+AGG - chr1.2:50977915-50977934 MS.gene068550:CDS 55.0%
ACCACTGGGTATCAGCAGCA+AGG - chr1.2:50980729-50980748 MS.gene068550:CDS 55.0%
AGAGTGGGTGTGAGAGAGAG+AGG + chr1.2:50978072-50978091 None:intergenic 55.0%
CAAATGACGGCCGATCGTCT+AGG - chr1.2:50979594-50979613 MS.gene068550:CDS 55.0%
CAACGGCGAACCTTCTGAGT+TGG - chr1.2:50980702-50980721 MS.gene068550:CDS 55.0%
CAGCAGCAAGGATGGTTGGA+GGG - chr1.2:50980741-50980760 MS.gene068550:CDS 55.0%
CAGGTACAGGTGCTTCAGAG+AGG + chr1.2:50982044-50982063 None:intergenic 55.0%
CCTCAATCAGCAACTTGCCC+AGG + chr1.2:50983650-50983669 None:intergenic 55.0%
CGCTAGGCAGGCTGTCAAAA+CGG + chr1.2:50980654-50980673 None:intergenic 55.0%
CTAGCATAGGTCCCTCCACA+TGG + chr1.2:50983206-50983225 None:intergenic 55.0%
CTGGGTATCAGCAGCAAGGA+TGG - chr1.2:50980733-50980752 MS.gene068550:CDS 55.0%
GAGAGAGAGGTGAGAGAGTG+AGG + chr1.2:50978059-50978078 None:intergenic 55.0%
GATCGTCTAGGAGGAGCTCA+AGG - chr1.2:50979606-50979625 MS.gene068550:CDS 55.0%
GCATTTCTCACCCATGGCTG+TGG + chr1.2:50983537-50983556 None:intergenic 55.0%
GCTAGGCAGGCTGTCAAAAC+GGG + chr1.2:50980653-50980672 None:intergenic 55.0%
GCTGATATGCTAGCGTTCCC+TGG - chr1.2:50980610-50980629 MS.gene068550:CDS 55.0%
GGAGGAGGAGGAGAATAGTG+AGG + chr1.2:50978304-50978323 None:intergenic 55.0%
GTGAGAGAGTGAGGGAGAGT+GGG + chr1.2:50978050-50978069 None:intergenic 55.0%
TAGGAGGAGCTCAAGGGATC+AGG - chr1.2:50979613-50979632 MS.gene068550:CDS 55.0%
TCAGCAGCAAGGATGGTTGG+AGG - chr1.2:50980740-50980759 MS.gene068550:CDS 55.0%
TCCTCCTCCTCCTCCTCTTA+GGG - chr1.2:50978312-50978331 MS.gene068550:CDS 55.0%
TCCTTGCTGCTGATACCCAG+TGG + chr1.2:50980733-50980752 None:intergenic 55.0%
TGAGAGAGTGAGGGAGAGTG+GGG + chr1.2:50978049-50978068 None:intergenic 55.0%
! CCTGGGCAAGTTGCTGATTG+AGG - chr1.2:50983647-50983666 MS.gene068550:intron 55.0%
! TGCTGATTGAGGAGTCTCGG+TGG - chr1.2:50983658-50983677 MS.gene068550:CDS 55.0%
! TTTTGACAGCCTGCCTAGCG+GGG - chr1.2:50980654-50980673 MS.gene068550:CDS 55.0%
!! CGTTTTGACAGCCTGCCTAG+CGG - chr1.2:50980652-50980671 MS.gene068550:CDS 55.0%
!! CTCTCTGAAGCACCTGTACC+TGG - chr1.2:50982042-50982061 MS.gene068550:CDS 55.0%
!! GTTTTGACAGCCTGCCTAGC+GGG - chr1.2:50980653-50980672 MS.gene068550:CDS 55.0%
ACCCTAAGAGGAGGAGGAGG+AGG + chr1.2:50978316-50978335 None:intergenic 60.0%
ATGACGGCCGATCGTCTAGG+AGG - chr1.2:50979597-50979616 MS.gene068550:CDS 60.0%
CACCAGCAGGAGCAGCACAT+TGG - chr1.2:50980588-50980607 MS.gene068550:CDS 60.0%
CACCTTTCTGGGTTGTGGGC+GGG + chr1.2:50977979-50977998 None:intergenic 60.0%
CCAAGGCAGTGACACGTGTG+AGG - chr1.2:50977904-50977923 MS.gene068550:CDS 60.0%
CTCCTCCTCCTCCTCCTCTT+AGG - chr1.2:50978311-50978330 MS.gene068550:CDS 60.0%
GCACCTTTCTGGGTTGTGGG+CGG + chr1.2:50977980-50977999 None:intergenic 60.0%
GGCAGTGACACGTGTGAGGA+AGG - chr1.2:50977908-50977927 MS.gene068550:CDS 60.0%
GGTGAGAGAGTGAGGGAGAG+TGG + chr1.2:50978051-50978070 None:intergenic 60.0%
TGAAACCTTCCCCGCTAGGC+AGG + chr1.2:50980666-50980685 None:intergenic 60.0%
! AAGAGGTGCAAGGCACCAGC+AGG - chr1.2:50980575-50980594 MS.gene068550:CDS 60.0%
! AGCCAATGTGCTGCTCCTGC+TGG + chr1.2:50980593-50980612 None:intergenic 60.0%
! CCTCACACGTGTCACTGCCT+TGG + chr1.2:50977907-50977926 None:intergenic 60.0%
AGCCCGCCCACAACCCAGAA+AGG - chr1.2:50977974-50977993 MS.gene068550:CDS 65.0%
!! TGGGTTGTGGGCGGGCTACT+GGG + chr1.2:50977971-50977990 None:intergenic 65.0%
GACAGCCTGCCTAGCGGGGA+AGG - chr1.2:50980658-50980677 MS.gene068550:CDS 70.0%
! GCGGGCTACTGGGGGAAGGA+TGG + chr1.2:50977961-50977980 None:intergenic 70.0%
!! CTGGGTTGTGGGCGGGCTAC+TGG + chr1.2:50977972-50977991 None:intergenic 70.0%
!! GGGTTGTGGGCGGGCTACTG+GGG + chr1.2:50977970-50977989 None:intergenic 70.0%
!! GGTTGTGGGCGGGCTACTGG+GGG + chr1.2:50977969-50977988 None:intergenic 70.0%
!! GTGGGCGGGCTACTGGGGGA+AGG + chr1.2:50977965-50977984 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 50977897 50983770 50977897 ID=MS.gene068550
chr1.2 mRNA 50977897 50983770 50977897 ID=MS.gene068550.t1;Parent=MS.gene068550
chr1.2 exon 50983650 50983770 50983650 ID=MS.gene068550.t1.exon1;Parent=MS.gene068550.t1
chr1.2 CDS 50983650 50983770 50983650 ID=cds.MS.gene068550.t1;Parent=MS.gene068550.t1
chr1.2 exon 50982489 50982577 50982489 ID=MS.gene068550.t1.exon2;Parent=MS.gene068550.t1
chr1.2 CDS 50982489 50982577 50982489 ID=cds.MS.gene068550.t1;Parent=MS.gene068550.t1
chr1.2 exon 50980389 50982302 50980389 ID=MS.gene068550.t1.exon3;Parent=MS.gene068550.t1
chr1.2 CDS 50980389 50982302 50980389 ID=cds.MS.gene068550.t1;Parent=MS.gene068550.t1
chr1.2 exon 50979478 50979661 50979478 ID=MS.gene068550.t1.exon4;Parent=MS.gene068550.t1
chr1.2 CDS 50979478 50979661 50979478 ID=cds.MS.gene068550.t1;Parent=MS.gene068550.t1
chr1.2 exon 50977897 50978507 50977897 ID=MS.gene068550.t1.exon5;Parent=MS.gene068550.t1
chr1.2 CDS 50977897 50978507 50977897 ID=cds.MS.gene068550.t1;Parent=MS.gene068550.t1
Gene Sequence

>MS.gene068550

ATGGTATCCAAGGCAGTGACACGTGTGAGGAAGGTGAGAGGCAAGTTTCACACGAATCACACCATCCTTCCCCCAGTAGCCCGCCCACAACCCAGAAAGGTGCATGTCAGCATTTGGGTTAGTAAGTATTTTGAACTTTCAAAATACAACCCCACTCTCCCTCACTCTCTCACCTCTCTCTCTCACACCCACTCTTCCAATAACGTCTCTCCATTAATGCTTCTCTCTCCACATTATTCTTACCCACTACTACTACTACACACCCTTTCTAGTTTCTACTCTATCTTCTCTAGCTAAAATCACTTCCTACATTTTCTTTTTCTTTTTCTTTTCATTTTGACTCTTGTCTTCTCGCGCCTATCACGCTCCACACTTTTTCCCTATAATTTCGATGTCCAATATTACCTCACTATTCTCCTCCTCCTCCTCCTCTTAGGGTTTTTCTTCTCTCTTCTTCCTTCTCGATCTGCGTCATTTCTTCATCTTTCATGATTCCTCGCCATGGACAAAATTAAATCTCACCGCAACAACTCCAAGCTTCATCTTCCTCAAGGTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTATAACTCCAGTTTCAGCTTCAATTCTCAACTACACTACTTCATCATCGTTTCATCTTCTCACTTTTTTCTTACTCGTTTTCAGCTTTTACTTTTTTAATTTAATTTTATTCTAAATATTTTTGTGTTTTTTGTTTTTATTTTTACAATTCAATCGCAGTTTCTTTGTTCATTAGTTATTTTAATTTGATTTCATTAAGGATCAGTGATTTTGTACGATAATTTAACTTCAATTCATTATAGTTCGAATTTTGAACAGTATGAAAAAGTTAATTGCGAAAGTCAAATTAATAATGATTATGACGACCAAATTTTTTTCTGCTTTTTTTAACTTTTCTGCGGTGGTATCGGCGTGATTTTGTTAATTTTCATCATGATTTTTCTTCTGTTATCATTTACTTTGATTAAACTTTACTTCATGTCTCAATTCAAGTATAATGTCGTGTTTATTGTAAATTTTGATGAAATTCTATTCTATATCAAGTTGATGATTGTTTCCTTGCATTGATTCTAGTAGTTTAGAACAGTATTTACTAATCAATGTTTAATTAATTGTTCTAAGTATCTGTTTGTGATTATTATTCTTTGTTGTTGTTTAATTCATTTTCAGGGAAAGAGCAGATTCATAAACAGCAACAACATCCGGATTTCTCTCCTGATTCTAGTTTCTCCGGTGGCAAGGTTGCAGAGAAAGATTCGGTGAGCTGTTTTTTCCTTTTTCACTTTTGGTTATGAATTTATGTTATAGCTAGAATTTAGAATAAGGGAAGTTAGTTTCTTAAATCATTGAGCTGTTTTATTTATGTCACCGTGTTATTTTTGTTATTTTTAGAAAACAAAAAAGAAGTAGCAACACTTATAGAAAATTTGTGTTGAATTTTGCAGTTCTCATTTAAATTTGGGTGGAAATCTTCTAAACAATCGGGTGGAACTCCAATTAAGAAGTTATTAGCTGAAGAGATGTCACCAGCAACTGAATCCAAGAGAAGATCCCCAGGTGTTATAGCTAGATTGATGGGTCTTGACGGTCTTCCATCTCAGCAGCCTAATAACAAGCAGCACAAGGATCTACAGAAATCAACACCTTTAGAGAAAAATCGAAGCAGAGGAACGGCAAATGACGGCCGATCGTCTAGGAGGAGCTCAAGGGATCAGGAAGAATTTAAGGATGTATTTGAGGTCTCAGAGATCCCAAAGGTAGAGAGTGGTAGGTATTCATCTTCAGATTTGAAGGACGGTGAAGATGAAATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTAGCGACGTATCAAGATTTTCAGTCTTCACAAGAGTTCCATGATACACTTGAGGCGTTGGACTCTAACAAGGATCTTCTGCTAAAATACTTCAAGCGGCCAGACTCTTTGTTTAAAAAGCATTTGAATGATCTGCAAGCTACCCCTTTCCAATCACATTCCGGTCATGTAGAACCAACCAATATGGAGAACTTTGAACATGATTTCAATTTGAGGTCAGATAGGGAGTCAACAGGGGTGAATTACAACAGGTTTCATCAGAAGCATCGCGATGGTTATCATGGCCAATTCGACAAAAGACGTGCGATGCATAATTCACCAAGATCGTCAAAGATTGTTGTCCTAAAACCTAATATGGGAAAATTTCAGAGTGGTACTAGAATTGAATCATCACCTTGTTCTCCGCATAATTTTCTGCCAGAACATGGAAATCATGCTGAATTTTCAGATGTCAGATTTAGAGATACTGAACTGTATCAAAAAATAAATTTGCCTGACAGTGCAAGGTCTTTTAGGCACAATTCTTTGGAATCTAGAGAAATTGCAAAGGAAGTAACTAGGCAAATGAAAAACAATCTGAGCAATGGTTGCATGATGTCTTCCTCTCCTAGATTTAAAGGATACTCTAGACATGATAGTTCAAGCAGTGCTTCTGGGAATGAATCTCCAGAGGAAATAACAGCAACTTTGGGTAAGCCGTTTGACTTAAATAGACATAGCAGACGGTCACCGCGTTCTAGTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAGATGGCACACAAGTCTCAAGAGGTGCAAGGCACCAGCAGGAGCAGCACATTGGCTGATATGCTAGCGTTCCCTGGTAAGAGAATGAAGGGTACCCGTTTTGACAGCCTGCCTAGCGGGGAAGGTTTCAATGATAAGTTTGCTCGCAACGGCGAACCTTCTGAGTTGGTTGAACCACTGGGTATCAGCAGCAAGGATGGTTGGAGGGATGCATGTATTAGTAGTTTGTCAAGGTCAAGATCTCTTCCTGCTTCATCTACTGTCTTTGGAAGTCCTAGAACATTCTTGCGTGCTGAAGCACTTCGTAATGATCGATATATGGTGCCAAAGGACCTTAAACGGGAGAGGAGAAGAGCGACAAAGAGTCTTGATCATAGACATGGTATGAATTCTAGAAGCACAATATCTGGTCACAAGAAGTCTTGGTCTGTGCATTCACTGAAGCAGGAAGTTAATGAGTTCTCTCCCGACTTAAATGAAGTTCAAAATAACATGAAGACCAATCTTGAAGAAGATTCACCCAATCTTGAGGTTCAGGCTCCTGAAACCTTTGAGCCCCTTAGAGATAAAAGTGTTGTTTGTGATGATGTTGCAGATGTATCAAATGAAAACACTGTTGGGCCTTCTGAATCTTCTTCGGATAAGGTTCTTCCTGGATCATCGGCTCGTGTCTTAGTAAAAGGCGACAGTAGTGTTGTTGACGAAGAAAATTCAATGCAAGAGGTTAGGTTTCTAGCCATGTTATTTTGATATGTTTATTGATACTTTACAAGAGCTATGATCGTCTTAATTTTTTGAAACAACTCAACTCACAGTCTGTGTTGATTTGACTCTTAACTTTATATTCACCTCATATCACATAAGCCAATTAACCAAATAATTTCTCATAAAATTTTTGAAATTATGAAATTGACTAGTCTAATTAGCTAAAAACCTCTAGCTATGAAATTGCCAAATCTATGATCTGGTGTTGAACTCAATATCTAATGGTTTTGTGCTAGCTATTTCTATTTGAATATGTGAACCCTTATTTATACATTTCTTAATAGCCTTCACTACACGTTTTGCGCAAAATTCCTTTCTTGTCTTTTGTCTGCTTCAGTCTTACTATTTTCCTATTCTTAGTTCTTTTATCTGATCATCATACAGGTCTTTCCTTGAGATTTTGATTATTTTTTGTAAATCATGTAAAGTTTCAAAAACATTGGAGTGTTTCAGAAATTATTAATATTAATACAGAACACCCATTTTGTTGCTATTAATATTTTGCACAATTGTTTAGATGGTGCTACCTTAGACTTAATCATACATTTTGTGAAGTTATCAGAGGATAGTTCTTTTTTTCTCAACGATCAATTATTCTGGATAGTAATTACTAGCTAGTTTAAATATTTCAAAGTTCTGTTAAGGGTCTTGTTTGTGCTGATTTGATATTGTTGTAATATTTCAGGACGTATCAGCTGGTTCTACTGGTGGATTTTCAGTCCTCTCTGAAGCACCTGTACCTGGACATGAATCTCCATGCTGTAAAGATGCTGATCAACCCAGTCCAATCTCTGTTCTTGATCCTTCTTTTACAGATGATCTGTCATCTTGTTCTGAATGTTTTGGAAGTGTCAGTGCTGACCTACAAGGTAAGGAAACTGGTATTGATTTTGATTATTCTAAAATGCTACTATTGTGTGTAGACCTCACCTTATATTTGGATTCATAATTGTTTCCTTTAGTTACTTAATCATCTCTGCCACGTGTTTTCTCATAATTTCCATACCATAGACATCAATAGGTGACTATTTTATGTAATATTAAACCCTATTTATGGACATCCTATATATGAAGGTTAAAGGTTTACAGTTTTTTGATCATAGACGGATTTAGCAATTGACTGAAAATCAATTTTCACATGTTTTGCCTTTTTAGCTTGCCACATTCTTGACAATAATAAAATTACTTCAATTTGCATGGTAGTCATGGTATGTAATGTAGAAAGTGGAGACAAATTGCTATATTCTATCTTCTTTTTTTTTATAGATGCTATATTCAATCTTGCATTACCACAAATTTATTATTTAACCATAGCAAGGGTGTGTTTCATGGGCAAAAACAAACTGCAGTGTCAATGACCTAATAATTACGTCATCAATCTCTTAATGCCTTTGAGGTCTTAGTATATACACCCTCCGGTCACAAATATAAGCAAAATTCCATGTTTTAGATTCATTCAATAAATGATGTATGTGGTCTTTATTGTAGACAACATACATCATTTATTGAATGAATCTAAAATATGAATTTTTGCTTATATTTGTGACCGGAGGATGTATATCTTAACAATCTCATGTTATATGCGACAGTTGTGATTCGATTTAAGTAGCTGTTAGTATTTGATAGACATGATAAATCACCAGCACAAATGAATTTGTTGCTCAAACTTTCAACCATCTTCTGCTTCAAACCTTTCATCAATTTTTGGAGCTTTATAACTGAAGAATGTTGTTTCGTTTAACAGTTGATTGGCTTTCTACTAAGCATATATAAGTCTGTCTCTGATGTTTGTGCCTTTTTTTTGGTTTCCTTGTTGTAATGAACTGTTATTGTTGATAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGACCATGTGGAGGGACCTATGCTAGTTTCAAGTGACGAAGATGGCGTGGAAGTATCTTCTGAAATGTTAGAAGGAAATACATTATGGAGAACTGAAGATAGCTGGGAGTCTTCTTACATTATTGATGTTTTGTCTGAATCTGCTATTGCTGATGCTCAAACTGATAATAATTTGGAAGTTTGGCAATCTCTAGAATGCCCTGTGAGTGTTTCTGTGTTTGAAGATCTGGAAGATAGGTACAGTGATTTGACTACTTGTTCAAGGTCTGAAAGGAGATTGCTTTTCGACCGCATCAATTCAGGAATTGTCAAGATTCACGAGCAATCTACTGACCCACAGCCATGGGTGAGAAATGCAGCCAAACCTTTTGGATCAAAAATGATTAACGGGCTTCAAGATGGTCTTTTCCAGATGCTAGGGAACCAAGGAAAGGTAGAGGATGATGTCCTGGGCAAGTTGCTGATTGAGGAGTCTCGGTGGTTGAAGTTGAGAGATGACATTGATGTAATAGGTAGAGAAGTTGAGAGATTGATAGTAGATGATTTAGTGGCAGAAATAGTCGGTATCTAG
Protein sequence

>MS.gene068550.t1

MVSKAVTRVRKVRGKFHTNHTILPPVARPQPRKVHVSIWVRKEQIHKQQQHPDFSPDSSFSGGKVAEKDSFSFKFGWKSSKQSGGTPIKKLLAEEMSPATESKRRSPGVIARLMGLDGLPSQQPNNKQHKDLQKSTPLEKNRSRGTANDGRSSRRSSRDQEEFKDVFEVSEIPKVESGRYSSSDLKDGEDEMSFIEQKFMDAKRLATYQDFQSSQEFHDTLEALDSNKDLLLKYFKRPDSLFKKHLNDLQATPFQSHSGHVEPTNMENFEHDFNLRSDRESTGVNYNRFHQKHRDGYHGQFDKRRAMHNSPRSSKIVVLKPNMGKFQSGTRIESSPCSPHNFLPEHGNHAEFSDVRFRDTELYQKINLPDSARSFRHNSLESREIAKEVTRQMKNNLSNGCMMSSSPRFKGYSRHDSSSSASGNESPEEITATLGKPFDLNRHSRRSPRSSESSVSREAKKRLSERWKMAHKSQEVQGTSRSSTLADMLAFPGKRMKGTRFDSLPSGEGFNDKFARNGEPSELVEPLGISSKDGWRDACISSLSRSRSLPASSTVFGSPRTFLRAEALRNDRYMVPKDLKRERRRATKSLDHRHGMNSRSTISGHKKSWSVHSLKQEVNEFSPDLNEVQNNMKTNLEEDSPNLEVQAPETFEPLRDKSVVCDDVADVSNENTVGPSESSSDKVLPGSSARVLVKGDSSVVDEENSMQEDVSAGSTGGFSVLSEAPVPGHESPCCKDADQPSPISVLDPSFTDDLSSCSECFGSVSADLQGLRMQLQLLKLESEDHVEGPMLVSSDEDGVEVSSEMLEGNTLWRTEDSWESSYIIDVLSESAIADAQTDNNLEVWQSLECPVSVSVFEDLEDRYSDLTTCSRSERRLLFDRINSGIVKIHEQSTDPQPWVRNAAKPFGSKMINGLQDGLFQMLGNQGKVEDDVLGKLLIEESRWLKLRDDIDVIGREVERLIVDDLVAEIVGI