Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068625.t1 | AES95929.2 | 95.8 | 617 | 26 | 0 | 3 | 619 | 55 | 671 | 0.00E+00 | 1241.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068625.t1 | Q8RJP2 | 25.7 | 541 | 310 | 22 | 86 | 613 | 116 | 577 | 2.7e-32 | 141.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068625.t1 | G7KGH4 | 95.8 | 617 | 26 | 0 | 3 | 619 | 55 | 671 | 0.0e+00 | 1241.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058848 | MS.gene068625 | 0.803129 | 4.04E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068625.t1 | MTR_5g031170 | 95.786 | 617 | 26 | 0 | 3 | 619 | 55 | 671 | 0.0 | 1223 |
| MS.gene068625.t1 | MTR_8g068160 | 65.645 | 620 | 203 | 4 | 3 | 613 | 64 | 682 | 0.0 | 845 |
| MS.gene068625.t1 | MTR_8g068110 | 66.238 | 622 | 199 | 5 | 3 | 615 | 63 | 682 | 0.0 | 831 |
| MS.gene068625.t1 | MTR_8g068110 | 65.293 | 631 | 199 | 6 | 3 | 615 | 63 | 691 | 0.0 | 823 |
| MS.gene068625.t1 | MTR_8g068120 | 63.317 | 627 | 200 | 7 | 3 | 613 | 72 | 684 | 0.0 | 804 |
| MS.gene068625.t1 | MTR_5g066770 | 53.175 | 630 | 274 | 8 | 4 | 613 | 15 | 643 | 0.0 | 671 |
| MS.gene068625.t1 | MTR_3g111420 | 53.698 | 622 | 275 | 6 | 4 | 615 | 33 | 651 | 0.0 | 670 |
| MS.gene068625.t1 | MTR_3g111410 | 50.794 | 630 | 293 | 7 | 4 | 619 | 15 | 641 | 0.0 | 657 |
| MS.gene068625.t1 | MTR_3g111380 | 51.887 | 636 | 284 | 7 | 1 | 615 | 14 | 648 | 0.0 | 642 |
| MS.gene068625.t1 | MTR_3g111380 | 54.130 | 569 | 253 | 6 | 54 | 615 | 2 | 569 | 0.0 | 605 |
| MS.gene068625.t1 | MTR_3g111380 | 54.562 | 559 | 246 | 6 | 64 | 615 | 3 | 560 | 0.0 | 597 |
| MS.gene068625.t1 | MTR_3g111380 | 55.556 | 522 | 224 | 6 | 101 | 615 | 3 | 523 | 0.0 | 564 |
| MS.gene068625.t1 | MTR_3g111380 | 56.790 | 486 | 202 | 6 | 137 | 615 | 14 | 498 | 0.0 | 533 |
| MS.gene068625.t1 | MTR_3g111380 | 55.759 | 382 | 164 | 4 | 238 | 615 | 1 | 381 | 1.12e-143 | 422 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068625.t1 | AT2G22620 | 55.233 | 621 | 265 | 6 | 4 | 616 | 62 | 677 | 0.0 | 706 |
| MS.gene068625.t1 | AT2G22620 | 55.233 | 621 | 265 | 6 | 4 | 616 | 62 | 677 | 0.0 | 706 |
| MS.gene068625.t1 | AT1G09890 | 53.130 | 623 | 276 | 9 | 4 | 614 | 15 | 633 | 0.0 | 661 |
| MS.gene068625.t1 | AT1G09890 | 52.979 | 621 | 276 | 9 | 6 | 614 | 1 | 617 | 0.0 | 657 |
| MS.gene068625.t1 | AT1G09890 | 52.970 | 623 | 272 | 10 | 4 | 614 | 15 | 628 | 0.0 | 651 |
| MS.gene068625.t1 | AT1G09890 | 51.159 | 647 | 276 | 10 | 4 | 614 | 15 | 657 | 0.0 | 649 |
| MS.gene068625.t1 | AT1G09910 | 50.000 | 622 | 297 | 7 | 4 | 615 | 58 | 675 | 0.0 | 641 |
| MS.gene068625.t1 | AT1G09910 | 50.000 | 622 | 297 | 7 | 4 | 615 | 15 | 632 | 0.0 | 640 |
| MS.gene068625.t1 | AT1G09910 | 50.000 | 622 | 297 | 7 | 4 | 615 | 15 | 632 | 0.0 | 640 |
| MS.gene068625.t1 | AT4G38030 | 49.920 | 625 | 288 | 10 | 3 | 614 | 53 | 665 | 0.0 | 634 |
| MS.gene068625.t1 | AT1G09880 | 49.841 | 630 | 294 | 8 | 4 | 615 | 65 | 690 | 0.0 | 633 |
| MS.gene068625.t1 | AT1G09880 | 49.841 | 630 | 294 | 8 | 4 | 615 | 79 | 704 | 0.0 | 633 |
| MS.gene068625.t1 | AT1G09880 | 49.841 | 630 | 294 | 8 | 4 | 615 | 33 | 658 | 0.0 | 633 |
| MS.gene068625.t1 | AT1G09880 | 49.682 | 628 | 294 | 8 | 6 | 615 | 1 | 624 | 0.0 | 629 |
| MS.gene068625.t1 | AT4G37950 | 51.675 | 627 | 278 | 10 | 3 | 614 | 60 | 676 | 0.0 | 627 |
| MS.gene068625.t1 | AT4G37950 | 51.675 | 627 | 278 | 10 | 3 | 614 | 60 | 676 | 0.0 | 627 |
| MS.gene068625.t1 | AT4G24430 | 51.433 | 628 | 283 | 10 | 4 | 613 | 16 | 639 | 0.0 | 620 |
| MS.gene068625.t1 | AT2G22620 | 56.600 | 500 | 206 | 4 | 4 | 496 | 62 | 557 | 0.0 | 597 |
| MS.gene068625.t1 | AT2G22620 | 57.873 | 489 | 200 | 4 | 131 | 616 | 112 | 597 | 0.0 | 584 |
| MS.gene068625.t1 | AT1G09890 | 51.607 | 529 | 218 | 8 | 4 | 497 | 15 | 540 | 0.0 | 537 |
| MS.gene068625.t1 | AT4G24430 | 51.908 | 524 | 240 | 8 | 99 | 613 | 1 | 521 | 0.0 | 536 |
| MS.gene068625.t1 | AT2G22620 | 53.571 | 420 | 182 | 5 | 4 | 416 | 62 | 475 | 3.29e-156 | 457 |
| MS.gene068625.t1 | AT1G65210 | 54.545 | 187 | 82 | 3 | 429 | 614 | 62 | 246 | 8.96e-61 | 202 |
Find 151 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCAACTGTTTGGGAAAT+TGG | 0.140397 | 5.1:+21334782 | MS.gene068625:CDS |
| ATTCACAGGGCTATCAATTT+TGG | 0.141260 | 5.1:+21334303 | MS.gene068625:intron |
| AATCAAGATTTGACTCATTT+TGG | 0.163949 | 5.1:+21335892 | MS.gene068625:CDS |
| TTACCTGGTTTAATTGTAAT+TGG | 0.186445 | 5.1:-21334434 | None:intergenic |
| CACCTTTGGTCTATGTTTAT+AGG | 0.189602 | 5.1:-21332665 | None:intergenic |
| CCTAGTGTTCATTTGGTAAA+AGG | 0.192340 | 5.1:+21335846 | MS.gene068625:CDS |
| TTTGATTGAATAAAATTATA+AGG | 0.246769 | 5.1:-21333965 | None:intergenic |
| CAAACAGTTGGGCCATTTCT+TGG | 0.250334 | 5.1:-21334773 | None:intergenic |
| CCTTTAAATTGTGGATTAGA+TGG | 0.252359 | 5.1:-21333169 | None:intergenic |
| AACTTGTTTGCATGGGTTCC+TGG | 0.258856 | 5.1:+21334383 | MS.gene068625:CDS |
| ACCTTTGGTCTATGTTTATA+GGG | 0.259445 | 5.1:-21332664 | None:intergenic |
| AACCAATACAATCAAGTTAA+TGG | 0.265535 | 5.1:+21333376 | MS.gene068625:CDS |
| TCCCTTACTTTGGCAAATCC+TGG | 0.281064 | 5.1:+21332201 | MS.gene068625:CDS |
| TTATAACAAAGTTTCCATTT+TGG | 0.284242 | 5.1:-21334337 | None:intergenic |
| AGAAGGAGAGACTTATAAAA+AGG | 0.289826 | 5.1:+21333737 | MS.gene068625:CDS |
| AAGGGCATGGAGTTCTTCTA+TGG | 0.291408 | 5.1:+21332628 | MS.gene068625:CDS |
| CCATCTAATCCACAATTTAA+AGG | 0.292305 | 5.1:+21333169 | MS.gene068625:CDS |
| AAGTCTCTCCTTCTTGGAAT+TGG | 0.315514 | 5.1:-21333728 | None:intergenic |
| CAAGAAATGGCCCAACTGTT+TGG | 0.318768 | 5.1:+21334774 | MS.gene068625:CDS |
| ATAGTGAGAAAAGGCGATTC+TGG | 0.321658 | 5.1:+21332800 | MS.gene068625:CDS |
| GGACTTGTAAATGTCCGGTT+AGG | 0.325730 | 5.1:-21334018 | None:intergenic |
| CTATTAAAGTTGATCAAATA+AGG | 0.328562 | 5.1:+21332867 | MS.gene068625:CDS |
| GTGGTTGCTTGAAATTTATT+AGG | 0.329354 | 5.1:-21335302 | None:intergenic |
| TGCATGCAGCTTCAACTATA+TGG | 0.332495 | 5.1:+21333051 | MS.gene068625:intron |
| AGTTAGTTACCTGGCTTCCT+TGG | 0.333504 | 5.1:-21332903 | None:intergenic |
| CCCTTACTTTGGCAAATCCT+GGG | 0.334655 | 5.1:+21332202 | MS.gene068625:CDS |
| ATGGAATCCATGGATTATAT+TGG | 0.336026 | 5.1:+21335805 | MS.gene068625:CDS |
| TTAATAGCAGGGAATCCTTT+TGG | 0.336570 | 5.1:-21332851 | None:intergenic |
| GTCTTAGGAATATCATATTC+TGG | 0.344765 | 5.1:+21332231 | MS.gene068625:CDS |
| AAGATCAATTTAAATCTCTA+TGG | 0.348047 | 5.1:+21333802 | MS.gene068625:CDS |
| ATCCATTAACTTGATTGTAT+TGG | 0.349422 | 5.1:-21333378 | None:intergenic |
| GTTAGGGTTCCACGTTGATT+AGG | 0.350575 | 5.1:-21334001 | None:intergenic |
| TACATTGGTCTAGCTTGGCC+TGG | 0.352021 | 5.1:+21334172 | MS.gene068625:CDS |
| TGGACTAGAGCAGACCAAAA+TGG | 0.352907 | 5.1:+21334323 | MS.gene068625:CDS |
| TACCTGCACTTCAGCATTAG+AGG | 0.353948 | 5.1:-21335396 | None:intergenic |
| ATATGGCAATATCAGATATT+AGG | 0.356406 | 5.1:+21333068 | MS.gene068625:CDS |
| GCATGGGTTCCTGGCTATAT+TGG | 0.358022 | 5.1:+21334392 | MS.gene068625:CDS |
| TATGATAGGTTTAGGCAATA+TGG | 0.358897 | 5.1:+21335087 | MS.gene068625:intron |
| ATGGAAAATGTACTTGAATC+TGG | 0.376558 | 5.1:+21332255 | MS.gene068625:CDS |
| AAGAAATGGCCCAACTGTTT+GGG | 0.377978 | 5.1:+21334775 | MS.gene068625:CDS |
| GGTTTAGGCAATATGGTCTA+TGG | 0.378350 | 5.1:+21335094 | MS.gene068625:intron |
| GGAAATGAAGATGATGATAG+AGG | 0.381623 | 5.1:+21332276 | MS.gene068625:CDS |
| CTAGCTTGGCCTGGGGATGC+AGG | 0.388413 | 5.1:+21334181 | MS.gene068625:CDS |
| CCCCAGGATTTGCCAAAGTA+AGG | 0.394846 | 5.1:-21332203 | None:intergenic |
| TACGAGTGAATTCAAGTTGA+TGG | 0.396239 | 5.1:-21334741 | None:intergenic |
| TATTCTCTTTGTTGTGAAGT+AGG | 0.402262 | 5.1:-21335757 | None:intergenic |
| ATGAACACTAGGTACTTCTA+TGG | 0.404001 | 5.1:-21335835 | None:intergenic |
| ACATTGGTCTAGCTTGGCCT+GGG | 0.407469 | 5.1:+21334173 | MS.gene068625:CDS |
| AGAAGTACCTAGTGTTCATT+TGG | 0.408895 | 5.1:+21335839 | MS.gene068625:CDS |
| GTTAGTTACCTGGCTTCCTT+GGG | 0.409083 | 5.1:-21332902 | None:intergenic |
| ATTCTCTTTGTTGTGAAGTA+GGG | 0.410957 | 5.1:-21335756 | None:intergenic |
| AACTTACAGAGAGGCAAGTT+GGG | 0.416244 | 5.1:-21333507 | None:intergenic |
| AATTCTCCAGCTGAGCGATC+TGG | 0.416473 | 5.1:-21334809 | None:intergenic |
| TGTGTTAAGAGAACAGCTTC+AGG | 0.421768 | 5.1:-21333145 | None:intergenic |
| GGTTTCAACTTGGTAGTTGA+AGG | 0.428631 | 5.1:-21335951 | None:intergenic |
| GTATATAATCCTCCAAGAAA+TGG | 0.429167 | 5.1:+21334761 | MS.gene068625:CDS |
| GTTACCTCTCCTTTAAATTG+TGG | 0.429246 | 5.1:-21333178 | None:intergenic |
| GATGTGAGATCTTGCTTAAC+GGG | 0.429375 | 5.1:-21333475 | None:intergenic |
| GAATTCAAGTAAACAAAGAT+AGG | 0.433996 | 5.1:-21333768 | None:intergenic |
| AATCAACGTGGAACCCTAAC+CGG | 0.443227 | 5.1:+21334004 | MS.gene068625:CDS |
| TGCCATGATCCTGCATCCCC+AGG | 0.444390 | 5.1:-21334190 | None:intergenic |
| ATTTGATCAACTTTAATAGC+AGG | 0.447303 | 5.1:-21332863 | None:intergenic |
| GTCTTGGACTTGTAAATGTC+CGG | 0.451859 | 5.1:-21334023 | None:intergenic |
| ACGAGGTTAGCGTAAGGCTT+TGG | 0.452758 | 5.1:-21334839 | None:intergenic |
| GGCCTGGGGATGCAGGATCA+TGG | 0.454305 | 5.1:+21334188 | MS.gene068625:CDS |
| TATAGGTATATAGTGAGAAA+AGG | 0.454887 | 5.1:+21332791 | MS.gene068625:intron |
| GGTCATACAACTTGTTTGCA+TGG | 0.455272 | 5.1:+21334375 | MS.gene068625:CDS |
| CAGGATCTTGTTTACACAGT+TGG | 0.455563 | 5.1:+21335144 | MS.gene068625:CDS |
| TGGCATCATGTCCCTTACTT+TGG | 0.456230 | 5.1:+21332191 | MS.gene068625:CDS |
| GACTTGTAAATGTCCGGTTA+GGG | 0.463817 | 5.1:-21334017 | None:intergenic |
| TGCCAATTTCCCAAACAGTT+GGG | 0.472457 | 5.1:-21334784 | None:intergenic |
| GGCATTCCAGATCGCTCAGC+TGG | 0.474004 | 5.1:+21334803 | MS.gene068625:CDS |
| TGGAAGATTATATTTGATCA+TGG | 0.475105 | 5.1:+21335326 | MS.gene068625:CDS |
| TGTTGTGAAGTAGGGAGGAT+TGG | 0.476508 | 5.1:-21335748 | None:intergenic |
| GTCATACAACTTGTTTGCAT+GGG | 0.477226 | 5.1:+21334376 | MS.gene068625:CDS |
| GGTTTAGAGACTAACTGGTC+CGG | 0.480809 | 5.1:-21334887 | None:intergenic |
| GAGTTCTATATGATTATATC+CGG | 0.480910 | 5.1:+21335919 | MS.gene068625:CDS |
| TAGTTGAAGGACTTTCTAAC+CGG | 0.482888 | 5.1:-21335938 | None:intergenic |
| CAGCATTAGAGGCACTTGCT+AGG | 0.490093 | 5.1:-21335385 | None:intergenic |
| TCGTTAATGTATACCCGTCT+TGG | 0.490306 | 5.1:-21334039 | None:intergenic |
| ATGCCAATTTCCCAAACAGT+TGG | 0.493759 | 5.1:-21334785 | None:intergenic |
| TGCCTCTAATGCTGAAGTGC+AGG | 0.498076 | 5.1:+21335394 | MS.gene068625:CDS |
| GTGGTATTTGAACGACCAAA+AGG | 0.498149 | 5.1:+21332836 | MS.gene068625:CDS |
| TTAGTAACTATCGAAAGGAT+TGG | 0.501373 | 5.1:+21335169 | MS.gene068625:CDS |
| TACGTCTTTGCCAGCATAGT+GGG | 0.502430 | 5.1:-21333700 | None:intergenic |
| CAAGAATCATGGTTTCAACT+TGG | 0.502857 | 5.1:-21335961 | None:intergenic |
| ATGGACAGATGCTAAACAAA+AGG | 0.504220 | 5.1:+21333821 | MS.gene068625:CDS |
| CCTTACTTTGGCAAATCCTG+GGG | 0.509142 | 5.1:+21332203 | MS.gene068625:CDS |
| TTTGTAAGCACCCACTATGC+TGG | 0.510502 | 5.1:+21333690 | MS.gene068625:CDS |
| ATACCAAGGCATGGAATCCA+TGG | 0.511293 | 5.1:+21335795 | MS.gene068625:CDS |
| TTTGATCAACTTTAATAGCA+GGG | 0.515830 | 5.1:-21332862 | None:intergenic |
| CTCTTTGTTGTGAAGTAGGG+AGG | 0.516658 | 5.1:-21335753 | None:intergenic |
| AGATGTGAGATCTTGCTTAA+CGG | 0.517376 | 5.1:-21333476 | None:intergenic |
| GAACTTACAGAGAGGCAAGT+TGG | 0.518644 | 5.1:-21333508 | None:intergenic |
| GACATTTACAAGTCCAAGAC+GGG | 0.518790 | 5.1:+21334026 | MS.gene068625:CDS |
| ATGCATACATTGGTCTAGCT+TGG | 0.520047 | 5.1:+21334167 | MS.gene068625:CDS |
| AATTACCATTGCAGAGTCCA+TGG | 0.520639 | 5.1:+21332551 | MS.gene068625:intron |
| AGATATTAGGCAAAGAAGAA+TGG | 0.520707 | 5.1:+21333081 | MS.gene068625:CDS |
| ATGGATTCCATGCCTTGGTA+TGG | 0.521822 | 5.1:-21335793 | None:intergenic |
| AGCATTAGAGGCACTTGCTA+GGG | 0.522110 | 5.1:-21335384 | None:intergenic |
| CGACTGAGAAACTTGTTCCA+TGG | 0.523830 | 5.1:-21332568 | None:intergenic |
| CTCTCCTTCTTGGAATTGGA+TGG | 0.525171 | 5.1:-21333724 | None:intergenic |
| ACAGTTGGGCCATTTCTTGG+AGG | 0.543249 | 5.1:-21334770 | None:intergenic |
| AGGAATATCATATTCTGGAA+TGG | 0.543447 | 5.1:+21332236 | MS.gene068625:CDS |
| TTTCAGGTGGTGATTAGCAA+TGG | 0.543809 | 5.1:+21332171 | MS.gene068625:intron |
| TACTTCACAACAAAGAGAAT+AGG | 0.544075 | 5.1:+21335759 | MS.gene068625:CDS |
| AATACAATCAAGTTAATGGA+TGG | 0.547110 | 5.1:+21333380 | MS.gene068625:CDS |
| ATTATTCACGAATGACATCC+CGG | 0.549682 | 5.1:+21334868 | MS.gene068625:CDS |
| TAAACAACCAATATAATCCA+TGG | 0.550594 | 5.1:-21335812 | None:intergenic |
| AATCCATGGATTCCATGCCT+TGG | 0.552884 | 5.1:-21335798 | None:intergenic |
| AGGGTTCCACGTTGATTAGG+TGG | 0.553836 | 5.1:-21333998 | None:intergenic |
| AACACAGAACGAGAATATAG+TGG | 0.554593 | 5.1:+21332592 | MS.gene068625:CDS |
| AATTATATATGCAGGAGCAC+AGG | 0.555646 | 5.1:+21335278 | MS.gene068625:intron |
| TTGTAATCTCCAATATAGCC+AGG | 0.558313 | 5.1:-21334401 | None:intergenic |
| TATCGACTGAACTCAAAAGT+TGG | 0.559908 | 5.1:+21333942 | MS.gene068625:CDS |
| CTTACTTTGGCAAATCCTGG+GGG | 0.563800 | 5.1:+21332204 | MS.gene068625:CDS |
| AGGGCATGGAGTTCTTCTAT+GGG | 0.567553 | 5.1:+21332629 | MS.gene068625:CDS |
| CCATTGCGGAACTCATTACT+CGG | 0.568971 | 5.1:-21333448 | None:intergenic |
| GTTTAGAGACTAACTGGTCC+GGG | 0.569683 | 5.1:-21334886 | None:intergenic |
| CAGCGATTTATATCCAACTC+AGG | 0.575588 | 5.1:+21335125 | MS.gene068625:CDS |
| CCCAGGATTTGCCAAAGTAA+GGG | 0.577911 | 5.1:-21332202 | None:intergenic |
| TTGGATATAAATCGCTGTAA+CGG | 0.579754 | 5.1:-21335119 | None:intergenic |
| AGTAATGAGTTCCGCAATGG+TGG | 0.585879 | 5.1:+21333451 | MS.gene068625:CDS |
| AATGCTAAGAATGCATACAT+TGG | 0.588205 | 5.1:+21334157 | MS.gene068625:CDS |
| CTACGTCTTTGCCAGCATAG+TGG | 0.588233 | 5.1:-21333701 | None:intergenic |
| GAAATGAAGATGATGATAGA+GGG | 0.589688 | 5.1:+21332277 | MS.gene068625:CDS |
| ATCATGGCAGCGAGAAAGCA+AGG | 0.594587 | 5.1:+21334204 | MS.gene068625:CDS |
| TGGTGTTAGTAACTATCGAA+AGG | 0.597830 | 5.1:+21335164 | MS.gene068625:CDS |
| TTGATTGTATTGGTTCTCAG+TGG | 0.609971 | 5.1:-21333368 | None:intergenic |
| TAATCCACAATTTAAAGGAG+AGG | 0.612404 | 5.1:+21333174 | MS.gene068625:CDS |
| GATAGTGCCATACCAAGGCA+TGG | 0.612532 | 5.1:+21335786 | MS.gene068625:CDS |
| ATAAATTTCAAGCAACCACA+TGG | 0.612722 | 5.1:+21335306 | MS.gene068625:CDS |
| GATCATGGTGCTGTAATAAG+TGG | 0.615908 | 5.1:+21335341 | MS.gene068625:CDS |
| CTGTTCACGAGGTTAGCGTA+AGG | 0.616934 | 5.1:-21334845 | None:intergenic |
| TTACTTTGGCAAATCCTGGG+GGG | 0.623303 | 5.1:+21332205 | MS.gene068625:CDS |
| CAAGATCTCACATCTCATGT+TGG | 0.624859 | 5.1:+21333484 | MS.gene068625:CDS |
| CATTGGTCTAGCTTGGCCTG+GGG | 0.625777 | 5.1:+21334174 | MS.gene068625:CDS |
| TCCCTATAAACATAGACCAA+AGG | 0.628590 | 5.1:+21332663 | MS.gene068625:CDS |
| GTGTAAACAAGATCCTGAGT+TGG | 0.634528 | 5.1:-21335138 | None:intergenic |
| GGACATTTACAAGTCCAAGA+CGG | 0.637789 | 5.1:+21334025 | MS.gene068625:CDS |
| CCGAGTAATGAGTTCCGCAA+TGG | 0.639316 | 5.1:+21333448 | MS.gene068625:CDS |
| ATCAAATATAATCTTCCATG+TGG | 0.640692 | 5.1:-21335321 | None:intergenic |
| TCTCCAATTACAATTAAACC+AGG | 0.641476 | 5.1:+21334431 | MS.gene068625:CDS |
| TCAATGAAAGATAGAGATGA+CGG | 0.642085 | 5.1:+21333106 | MS.gene068625:CDS |
| GTAGCCATCCAATTCCAAGA+AGG | 0.653857 | 5.1:+21333720 | MS.gene068625:CDS |
| GCTTAACGGGTCCACCATTG+CGG | 0.655063 | 5.1:-21333462 | None:intergenic |
| GCAAACAAGTTGTATGACCC+AGG | 0.663552 | 5.1:-21334371 | None:intergenic |
| GAGATGATAGTGCCATACCA+AGG | 0.696169 | 5.1:+21335781 | MS.gene068625:CDS |
| TCGTGAATAATCTGTTCACG+AGG | 0.698648 | 5.1:-21334856 | None:intergenic |
| ACAGAACGAGAATATAGTGG+AGG | 0.712115 | 5.1:+21332595 | MS.gene068625:CDS |
| TTCATTCCACCTAATCAACG+TGG | 0.715096 | 5.1:+21333992 | MS.gene068625:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAGGTTTATAATT+AGG | - | chr5.1:21334975-21334994 | None:intergenic | 10.0% |
| !! | AAAAAATAGGTTTATAATTA+GGG | - | chr5.1:21334974-21334993 | None:intergenic | 10.0% |
| !! | TAATTATAAACATATTAATG+TGG | + | chr5.1:21331934-21331953 | MS.gene068625:intron | 10.0% |
| !! | TTTGATTGAATAAAATTATA+AGG | - | chr5.1:21333968-21333987 | None:intergenic | 10.0% |
| !! | AGTAATATAAAGATTTACAA+TGG | - | chr5.1:21331962-21331981 | None:intergenic | 15.0% |
| !! | ATAAGAGACTAATTTATAAT+TGG | + | chr5.1:21332528-21332547 | MS.gene068625:intron | 15.0% |
| !! | ATTGTAAATCTTTATATTAC+TGG | + | chr5.1:21331961-21331980 | MS.gene068625:intron | 15.0% |
| !! | TAATTGTTTAGTTAATAGTT+TGG | - | chr5.1:21334561-21334580 | None:intergenic | 15.0% |
| !! | TGAAATATATATTCTATGAT+AGG | + | chr5.1:21335073-21335092 | MS.gene068625:intron | 15.0% |
| !! | TTATAAAAAATATTGTACCT+GGG | + | chr5.1:21334354-21334373 | MS.gene068625:CDS | 15.0% |
| !!! | AGATAGTGAAATTATTTTAA+AGG | - | chr5.1:21335504-21335523 | None:intergenic | 15.0% |
| !!! | ATTTTCTTTAAATGATTTTC+AGG | + | chr5.1:21332155-21332174 | MS.gene068625:intron | 15.0% |
| !!! | TAATATATACTTGAATGTTT+TGG | + | chr5.1:21335688-21335707 | MS.gene068625:intron | 15.0% |
| !!! | TGTGATATTATTTTGATTAT+TGG | - | chr5.1:21334477-21334496 | None:intergenic | 15.0% |
| !!! | TTTTATTTTATCAGTGAAAT+TGG | - | chr5.1:21333616-21333635 | None:intergenic | 15.0% |
| !!! | TTTTGAATAATTTTGTTGAA+TGG | - | chr5.1:21332101-21332120 | None:intergenic | 15.0% |
| !! | AAGATCAATTTAAATCTCTA+TGG | + | chr5.1:21333802-21333821 | MS.gene068625:CDS | 20.0% |
| !! | AATTAAGTCCAAAATTGAAT+AGG | - | chr5.1:21332305-21332324 | None:intergenic | 20.0% |
| !! | AGAGTTGTTATATATAAAGA+AGG | + | chr5.1:21335003-21335022 | MS.gene068625:intron | 20.0% |
| !! | AGGTTTATATTATTAGTACA+TGG | + | chr5.1:21333262-21333281 | MS.gene068625:intron | 20.0% |
| !! | ATATATTCTATGATAGGTTT+AGG | + | chr5.1:21335079-21335098 | MS.gene068625:intron | 20.0% |
| !! | CATGCAAATAAATTTATGAA+TGG | + | chr5.1:21333307-21333326 | MS.gene068625:intron | 20.0% |
| !! | GAATTATATACAAATTCACA+GGG | + | chr5.1:21334290-21334309 | MS.gene068625:intron | 20.0% |
| !! | GAGAATATATTATCTTACAT+CGG | - | chr5.1:21335663-21335682 | None:intergenic | 20.0% |
| !! | GAGTTGTTATATATAAAGAA+GGG | + | chr5.1:21335004-21335023 | MS.gene068625:intron | 20.0% |
| !! | GTTATAAAAAATATTGTACC+TGG | + | chr5.1:21334353-21334372 | MS.gene068625:CDS | 20.0% |
| !! | TAAACTTCAATTATATATGC+AGG | + | chr5.1:21335270-21335289 | MS.gene068625:intron | 20.0% |
| !! | TGAATTATATACAAATTCAC+AGG | + | chr5.1:21334289-21334308 | MS.gene068625:intron | 20.0% |
| !! | TTATAACAAGAGCTAATATT+TGG | - | chr5.1:21332980-21332999 | None:intergenic | 20.0% |
| !! | TTTCTTTACCATATTCATTA+GGG | + | chr5.1:21334120-21334139 | MS.gene068625:intron | 20.0% |
| !!! | AATAGGTTTATGCTTTTTTT+TGG | + | chr5.1:21333207-21333226 | MS.gene068625:intron | 20.0% |
| !!! | AGACTTATAAAAAGGTTTTT+GGG | + | chr5.1:21333745-21333764 | MS.gene068625:CDS | 20.0% |
| !!! | ATAGGTTTATGCTTTTTTTT+GGG | + | chr5.1:21333208-21333227 | MS.gene068625:intron | 20.0% |
| !!! | CTATTAAAGTTGATCAAATA+AGG | + | chr5.1:21332867-21332886 | MS.gene068625:CDS | 20.0% |
| !!! | TATGCTTTGTTATTATTACT+AGG | + | chr5.1:21332383-21332402 | MS.gene068625:intron | 20.0% |
| !!! | TTATAACAAAGTTTCCATTT+TGG | - | chr5.1:21334340-21334359 | None:intergenic | 20.0% |
| ! | AACCAATACAATCAAGTTAA+TGG | + | chr5.1:21333376-21333395 | MS.gene068625:CDS | 25.0% |
| ! | AATACAATCAAGTTAATGGA+TGG | + | chr5.1:21333380-21333399 | MS.gene068625:CDS | 25.0% |
| ! | ACAAAGCATAATTATGTCAA+TGG | - | chr5.1:21332373-21332392 | None:intergenic | 25.0% |
| ! | ATATGGCAATATCAGATATT+AGG | + | chr5.1:21333068-21333087 | MS.gene068625:CDS | 25.0% |
| ! | ATATTACTGGAAAAATCCAA+CGG | + | chr5.1:21331974-21331993 | MS.gene068625:intron | 25.0% |
| ! | ATCAAATATAATCTTCCATG+TGG | - | chr5.1:21335324-21335343 | None:intergenic | 25.0% |
| ! | ATTTATTTGCAAACTTTACC+TGG | - | chr5.1:21334452-21334471 | None:intergenic | 25.0% |
| ! | ATTTGATCAACTTTAATAGC+AGG | - | chr5.1:21332866-21332885 | None:intergenic | 25.0% |
| ! | CTGCAATGTAACAAATTTAA+AGG | - | chr5.1:21332038-21332057 | None:intergenic | 25.0% |
| ! | CTTTCTTTACCATATTCATT+AGG | + | chr5.1:21334119-21334138 | MS.gene068625:intron | 25.0% |
| ! | GAACGTCAACTATTTAATAA+TGG | - | chr5.1:21334911-21334930 | None:intergenic | 25.0% |
| ! | GAATTCAAGTAAACAAAGAT+AGG | - | chr5.1:21333771-21333790 | None:intergenic | 25.0% |
| ! | GAGGACTGAAAATATATTTA+GGG | - | chr5.1:21335455-21335474 | None:intergenic | 25.0% |
| ! | GAGTTCTATATGATTATATC+CGG | + | chr5.1:21335919-21335938 | MS.gene068625:CDS | 25.0% |
| ! | GGGAGTAAATAAATAAATCA+TGG | - | chr5.1:21333869-21333888 | None:intergenic | 25.0% |
| ! | GTAACAATGTGTATATATGT+AGG | + | chr5.1:21334713-21334732 | MS.gene068625:intron | 25.0% |
| ! | GTCATTGCATACTAATAAAT+GGG | - | chr5.1:21333889-21333908 | None:intergenic | 25.0% |
| ! | TAAACAACCAATATAATCCA+TGG | - | chr5.1:21335815-21335834 | None:intergenic | 25.0% |
| ! | TATAGGTATATAGTGAGAAA+AGG | + | chr5.1:21332791-21332810 | MS.gene068625:intron | 25.0% |
| ! | TATTGGTAAAACTTTCTTTG+TGG | - | chr5.1:21335631-21335650 | None:intergenic | 25.0% |
| ! | TGGAAGATTATATTTGATCA+TGG | + | chr5.1:21335326-21335345 | MS.gene068625:CDS | 25.0% |
| ! | TGTCATTGCATACTAATAAA+TGG | - | chr5.1:21333890-21333909 | None:intergenic | 25.0% |
| ! | TGTTAATGAATATAAGCTTG+TGG | - | chr5.1:21332329-21332348 | None:intergenic | 25.0% |
| ! | TTACCTGGTTTAATTGTAAT+TGG | - | chr5.1:21334437-21334456 | None:intergenic | 25.0% |
| ! | TTCTTTACCATATTCATTAG+GGG | + | chr5.1:21334121-21334140 | MS.gene068625:intron | 25.0% |
| ! | TTGATTATGAACATGTTTCT+TGG | + | chr5.1:21332726-21332745 | MS.gene068625:intron | 25.0% |
| ! | TTTGATCAACTTTAATAGCA+GGG | - | chr5.1:21332865-21332884 | None:intergenic | 25.0% |
| !! | AATCAAGATTTGACTCATTT+TGG | + | chr5.1:21335892-21335911 | MS.gene068625:CDS | 25.0% |
| !! | ATATATTTCATTCGAGTTAG+TGG | - | chr5.1:21335063-21335082 | None:intergenic | 25.0% |
| !! | ATCCATTAACTTGATTGTAT+TGG | - | chr5.1:21333381-21333400 | None:intergenic | 25.0% |
| !! | CGTCACTAGTAATAATTTTT+CGG | - | chr5.1:21334506-21334525 | None:intergenic | 25.0% |
| !! | GAGACTTATAAAAAGGTTTT+TGG | + | chr5.1:21333744-21333763 | MS.gene068625:CDS | 25.0% |
| !!! | ATTTTTGATAGTTAGTTACC+TGG | - | chr5.1:21332915-21332934 | None:intergenic | 25.0% |
| !!! | TTCTTTAAATGATTTTCAGG+TGG | + | chr5.1:21332158-21332177 | MS.gene068625:intron | 25.0% |
| !!! | TTTTTGGCAAAACATTTCAA+AGG | + | chr5.1:21332419-21332438 | MS.gene068625:CDS | 25.0% |
| AAATCCTAGTCCCAATTATT+TGG | + | chr5.1:21332688-21332707 | MS.gene068625:intron | 30.0% | |
| AACTGCGATTAAAAAAGGAT+AGG | + | chr5.1:21332075-21332094 | MS.gene068625:intron | 30.0% | |
| AAGTTCAACACATCAAAGAT+GGG | + | chr5.1:21333525-21333544 | MS.gene068625:intron | 30.0% | |
| AATGCTAAGAATGCATACAT+TGG | + | chr5.1:21334157-21334176 | MS.gene068625:CDS | 30.0% | |
| ACAAACTGTGCCAAATAATT+GGG | - | chr5.1:21332701-21332720 | None:intergenic | 30.0% | |
| ACCTTTGGTCTATGTTTATA+GGG | - | chr5.1:21332667-21332686 | None:intergenic | 30.0% | |
| AGAAGGAGAGACTTATAAAA+AGG | + | chr5.1:21333737-21333756 | MS.gene068625:CDS | 30.0% | |
| AGATATTAGGCAAAGAAGAA+TGG | + | chr5.1:21333081-21333100 | MS.gene068625:CDS | 30.0% | |
| ATAAATTTCAAGCAACCACA+TGG | + | chr5.1:21335306-21335325 | MS.gene068625:CDS | 30.0% | |
| ATAATGGTTTAGAGACTAAC+TGG | - | chr5.1:21334895-21334914 | None:intergenic | 30.0% | |
| ATGGAAAATGTACTTGAATC+TGG | + | chr5.1:21332255-21332274 | MS.gene068625:CDS | 30.0% | |
| CATGAAAAACCAGAACTAAA+CGG | - | chr5.1:21333590-21333609 | None:intergenic | 30.0% | |
| CCATCTAATCCACAATTTAA+AGG | + | chr5.1:21333169-21333188 | MS.gene068625:CDS | 30.0% | |
| CGAGGACTGAAAATATATTT+AGG | - | chr5.1:21335456-21335475 | None:intergenic | 30.0% | |
| CTTCAAACTGCGATTAAAAA+AGG | + | chr5.1:21332070-21332089 | MS.gene068625:intron | 30.0% | |
| GAAATGAAGATGATGATAGA+GGG | + | chr5.1:21332277-21332296 | MS.gene068625:CDS | 30.0% | |
| GGAGAGGTAACAAAATAAAT+AGG | + | chr5.1:21333190-21333209 | MS.gene068625:intron | 30.0% | |
| GTATATAATCCTCCAAGAAA+TGG | + | chr5.1:21334761-21334780 | MS.gene068625:CDS | 30.0% | |
| GTCTTAGGAATATCATATTC+TGG | + | chr5.1:21332231-21332250 | MS.gene068625:CDS | 30.0% | |
| GTGGTTGCTTGAAATTTATT+AGG | - | chr5.1:21335305-21335324 | None:intergenic | 30.0% | |
| TAAGTTCAACACATCAAAGA+TGG | + | chr5.1:21333524-21333543 | MS.gene068625:intron | 30.0% | |
| TAATCCACAATTTAAAGGAG+AGG | + | chr5.1:21333174-21333193 | MS.gene068625:CDS | 30.0% | |
| TACATCGGTGTATACTTTAT+TGG | - | chr5.1:21335648-21335667 | None:intergenic | 30.0% | |
| TACTTCACAACAAAGAGAAT+AGG | + | chr5.1:21335759-21335778 | MS.gene068625:CDS | 30.0% | |
| TATATATAAAGAAGGGACAG+AGG | + | chr5.1:21335011-21335030 | MS.gene068625:intron | 30.0% | |
| TATGATAGGTTTAGGCAATA+TGG | + | chr5.1:21335087-21335106 | MS.gene068625:intron | 30.0% | |
| TCAATGAAAGATAGAGATGA+CGG | + | chr5.1:21333106-21333125 | MS.gene068625:CDS | 30.0% | |
| TCTCCAATTACAATTAAACC+AGG | + | chr5.1:21334431-21334450 | MS.gene068625:CDS | 30.0% | |
| TCTTTACCATATTCATTAGG+GGG | + | chr5.1:21334122-21334141 | MS.gene068625:intron | 30.0% | |
| TTAGTAACTATCGAAAGGAT+TGG | + | chr5.1:21335169-21335188 | MS.gene068625:CDS | 30.0% | |
| TTGGATATAAATCGCTGTAA+CGG | - | chr5.1:21335122-21335141 | None:intergenic | 30.0% | |
| ! | AATACGGTAGTTATTGCTTT+TGG | + | chr5.1:21335477-21335496 | MS.gene068625:intron | 30.0% |
| ! | AGGAATATCATATTCTGGAA+TGG | + | chr5.1:21332236-21332255 | MS.gene068625:CDS | 30.0% |
| ! | ATGGAATCCATGGATTATAT+TGG | + | chr5.1:21335805-21335824 | MS.gene068625:CDS | 30.0% |
| ! | ATTCTCTTTGTTGTGAAGTA+GGG | - | chr5.1:21335759-21335778 | None:intergenic | 30.0% |
| ! | CTCTTTTGCGCTAAAAAAAT+AGG | - | chr5.1:21334987-21335006 | None:intergenic | 30.0% |
| ! | CTTGTTTAAGTGTCATGTTT+TGG | + | chr5.1:21335245-21335264 | MS.gene068625:intron | 30.0% |
| ! | TATTCTCTTTGTTGTGAAGT+AGG | - | chr5.1:21335760-21335779 | None:intergenic | 30.0% |
| ! | TATTTTCAGTCCTCGAAATA+CGG | + | chr5.1:21335461-21335480 | MS.gene068625:intron | 30.0% |
| ! | TTTTATAAGTCTCTCCTTCT+TGG | - | chr5.1:21333737-21333756 | None:intergenic | 30.0% |
| !! | AGTGGAGGTTTCATTTTTAA+GGG | + | chr5.1:21332610-21332629 | MS.gene068625:CDS | 30.0% |
| !! | CCTTTAAATTGTGGATTAGA+TGG | - | chr5.1:21333172-21333191 | None:intergenic | 30.0% |
| !! | CTCAATTTGGTGCTATTAAT+AGG | + | chr5.1:21333242-21333261 | MS.gene068625:intron | 30.0% |
| !! | TAGTGGAGGTTTCATTTTTA+AGG | + | chr5.1:21332609-21332628 | MS.gene068625:CDS | 30.0% |
| AACACAGAACGAGAATATAG+TGG | + | chr5.1:21332592-21332611 | MS.gene068625:CDS | 35.0% | |
| AGATGTGAGATCTTGCTTAA+CGG | - | chr5.1:21333479-21333498 | None:intergenic | 35.0% | |
| ATGAACACTAGGTACTTCTA+TGG | - | chr5.1:21335838-21335857 | None:intergenic | 35.0% | |
| ATGGACAGATGCTAAACAAA+AGG | + | chr5.1:21333821-21333840 | MS.gene068625:CDS | 35.0% | |
| ATTATTCACGAATGACATCC+CGG | + | chr5.1:21334868-21334887 | MS.gene068625:CDS | 35.0% | |
| CAACAGAAAGCTAATTACCT+TGG | - | chr5.1:21335210-21335229 | None:intergenic | 35.0% | |
| CACAAACTGTGCCAAATAAT+TGG | - | chr5.1:21332702-21332721 | None:intergenic | 35.0% | |
| CACCTTTGGTCTATGTTTAT+AGG | - | chr5.1:21332668-21332687 | None:intergenic | 35.0% | |
| CCTAGTGTTCATTTGGTAAA+AGG | + | chr5.1:21335846-21335865 | MS.gene068625:CDS | 35.0% | |
| CTTTACCATATTCATTAGGG+GGG | + | chr5.1:21334123-21334142 | MS.gene068625:intron | 35.0% | |
| GAATGGTTTATGTTGCACTT+AGG | + | chr5.1:21333324-21333343 | MS.gene068625:intron | 35.0% | |
| GGAAATGAAGATGATGATAG+AGG | + | chr5.1:21332276-21332295 | MS.gene068625:CDS | 35.0% | |
| GTTACCTCTCCTTTAAATTG+TGG | - | chr5.1:21333181-21333200 | None:intergenic | 35.0% | |
| TACAAACTAATTGCGTCTCT+AGG | + | chr5.1:21334616-21334635 | MS.gene068625:intron | 35.0% | |
| TAGTTGAAGGACTTTCTAAC+CGG | - | chr5.1:21335941-21335960 | None:intergenic | 35.0% | |
| TCCCTATAAACATAGACCAA+AGG | + | chr5.1:21332663-21332682 | MS.gene068625:CDS | 35.0% | |
| TGTTATGATCCAAAAACCCA+CGG | - | chr5.1:21333428-21333447 | None:intergenic | 35.0% | |
| TTGTAATCTCCAATATAGCC+AGG | - | chr5.1:21334404-21334423 | None:intergenic | 35.0% | |
| TTTACCATATTCATTAGGGG+GGG | + | chr5.1:21334124-21334143 | MS.gene068625:intron | 35.0% | |
| ! | AATTATATATGCAGGAGCAC+AGG | + | chr5.1:21335278-21335297 | MS.gene068625:intron | 35.0% |
| ! | ATTCACAGGGCTATCAATTT+TGG | + | chr5.1:21334303-21334322 | MS.gene068625:intron | 35.0% |
| ! | CCTTTTACCAAATGAACACT+AGG | - | chr5.1:21335849-21335868 | None:intergenic | 35.0% |
| ! | GTCATACAACTTGTTTGCAT+GGG | + | chr5.1:21334376-21334395 | MS.gene068625:CDS | 35.0% |
| ! | TAGAGATGACGGTCAAAAAT+TGG | + | chr5.1:21333117-21333136 | MS.gene068625:CDS | 35.0% |
| ! | TATCGACTGAACTCAAAAGT+TGG | + | chr5.1:21333942-21333961 | MS.gene068625:CDS | 35.0% |
| ! | TGGTGTTAGTAACTATCGAA+AGG | + | chr5.1:21335164-21335183 | MS.gene068625:CDS | 35.0% |
| ! | TTAATAGCAGGGAATCCTTT+TGG | - | chr5.1:21332854-21332873 | None:intergenic | 35.0% |
| ! | TTCTGGATTTTACACTTACG+TGG | + | chr5.1:21332817-21332836 | MS.gene068625:CDS | 35.0% |
| !! | AGAAGTACCTAGTGTTCATT+TGG | + | chr5.1:21335839-21335858 | MS.gene068625:CDS | 35.0% |
| !! | AGATTTGACTCATTTTGGCA+AGG | + | chr5.1:21335897-21335916 | MS.gene068625:CDS | 35.0% |
| !! | AGGTACTTTGACGTTGTTTT+TGG | + | chr5.1:21332403-21332422 | MS.gene068625:intron | 35.0% |
| !! | AGGTTTCATTTTTAAGGGCA+TGG | + | chr5.1:21332615-21332634 | MS.gene068625:CDS | 35.0% |
| !! | GGTGTCATTTCTACTCAATT+TGG | + | chr5.1:21333229-21333248 | MS.gene068625:intron | 35.0% |
| !! | TACGAGTGAATTCAAGTTGA+TGG | - | chr5.1:21334744-21334763 | None:intergenic | 35.0% |
| !! | TTGATTGTATTGGTTCTCAG+TGG | - | chr5.1:21333371-21333390 | None:intergenic | 35.0% |
| !!! | AAGGACTGTTTTTAAACCCA+AGG | + | chr5.1:21332886-21332905 | MS.gene068625:CDS | 35.0% |
| !!! | AGAGGGTACCTATTCAATTT+TGG | + | chr5.1:21332294-21332313 | MS.gene068625:intron | 35.0% |
| AACTTACAGAGAGGCAAGTT+GGG | - | chr5.1:21333510-21333529 | None:intergenic | 40.0% | |
| AAGAAATGGCCCAACTGTTT+GGG | + | chr5.1:21334775-21334794 | MS.gene068625:CDS | 40.0% | |
| AAGTCTCTCCTTCTTGGAAT+TGG | - | chr5.1:21333731-21333750 | None:intergenic | 40.0% | |
| AATTACCATTGCAGAGTCCA+TGG | + | chr5.1:21332551-21332570 | MS.gene068625:intron | 40.0% | |
| ACAGAACGAGAATATAGTGG+AGG | + | chr5.1:21332595-21332614 | MS.gene068625:CDS | 40.0% | |
| ACTGACAAGCATCATAGAGA+GGG | - | chr5.1:21335566-21335585 | None:intergenic | 40.0% | |
| ATAGTGAGAAAAGGCGATTC+TGG | + | chr5.1:21332800-21332819 | MS.gene068625:CDS | 40.0% | |
| ATATAAAGAAGGGACAGAGG+AGG | + | chr5.1:21335014-21335033 | MS.gene068625:intron | 40.0% | |
| ATGCCAATTTCCCAAACAGT+TGG | - | chr5.1:21334788-21334807 | None:intergenic | 40.0% | |
| CAAGATCTCACATCTCATGT+TGG | + | chr5.1:21333484-21333503 | MS.gene068625:CDS | 40.0% | |
| CAGCGATTTATATCCAACTC+AGG | + | chr5.1:21335125-21335144 | MS.gene068625:CDS | 40.0% | |
| GACATTTACAAGTCCAAGAC+GGG | + | chr5.1:21334026-21334045 | MS.gene068625:CDS | 40.0% | |
| GACTTGTAAATGTCCGGTTA+GGG | - | chr5.1:21334020-21334039 | None:intergenic | 40.0% | |
| GATGTGAGATCTTGCTTAAC+GGG | - | chr5.1:21333478-21333497 | None:intergenic | 40.0% | |
| GATGTGTTGAACTTACAGAG+AGG | - | chr5.1:21333519-21333538 | None:intergenic | 40.0% | |
| GCAATAACTACCGTATTTCG+AGG | - | chr5.1:21335474-21335493 | None:intergenic | 40.0% | |
| GGACAGAGATAGTAGAAACT+GGG | - | chr5.1:21334953-21334972 | None:intergenic | 40.0% | |
| GGACATTTACAAGTCCAAGA+CGG | + | chr5.1:21334025-21334044 | MS.gene068625:CDS | 40.0% | |
| GGTTTAGGCAATATGGTCTA+TGG | + | chr5.1:21335094-21335113 | MS.gene068625:intron | 40.0% | |
| GTCAGTCATGTATCTCTATG+TGG | + | chr5.1:21335580-21335599 | MS.gene068625:intron | 40.0% | |
| GTCTTGGACTTGTAAATGTC+CGG | - | chr5.1:21334026-21334045 | None:intergenic | 40.0% | |
| GTGGTATTTGAACGACCAAA+AGG | + | chr5.1:21332836-21332855 | MS.gene068625:CDS | 40.0% | |
| GTGTAAACAAGATCCTGAGT+TGG | - | chr5.1:21335141-21335160 | None:intergenic | 40.0% | |
| GTTATGATCCAAAAACCCAC+GGG | - | chr5.1:21333427-21333446 | None:intergenic | 40.0% | |
| TCGTGAATAATCTGTTCACG+AGG | - | chr5.1:21334859-21334878 | None:intergenic | 40.0% | |
| TCGTTAATGTATACCCGTCT+TGG | - | chr5.1:21334042-21334061 | None:intergenic | 40.0% | |
| TGCATGCAGCTTCAACTATA+TGG | + | chr5.1:21333051-21333070 | MS.gene068625:intron | 40.0% | |
| TGCCAATTTCCCAAACAGTT+GGG | - | chr5.1:21334787-21334806 | None:intergenic | 40.0% | |
| TGGTTTATGTTGCACTTAGG+TGG | + | chr5.1:21333327-21333346 | MS.gene068625:intron | 40.0% | |
| TGTGCCAAATAATTGGGACT+AGG | - | chr5.1:21332695-21332714 | None:intergenic | 40.0% | |
| TGTGTTAAGAGAACAGCTTC+AGG | - | chr5.1:21333148-21333167 | None:intergenic | 40.0% | |
| TTCATTCCACCTAATCAACG+TGG | + | chr5.1:21333992-21334011 | MS.gene068625:CDS | 40.0% | |
| ! | ACATATCGTCCGTTTAGTTC+TGG | + | chr5.1:21333578-21333597 | MS.gene068625:intron | 40.0% |
| ! | ATGCATACATTGGTCTAGCT+TGG | + | chr5.1:21334167-21334186 | MS.gene068625:CDS | 40.0% |
| ! | CAGGATCTTGTTTACACAGT+TGG | + | chr5.1:21335144-21335163 | MS.gene068625:CDS | 40.0% |
| ! | GGTCATACAACTTGTTTGCA+TGG | + | chr5.1:21334375-21334394 | MS.gene068625:CDS | 40.0% |
| ! | GGTTTCAACTTGGTAGTTGA+AGG | - | chr5.1:21335954-21335973 | None:intergenic | 40.0% |
| ! | TTTCAGGTGGTGATTAGCAA+TGG | + | chr5.1:21332171-21332190 | MS.gene068625:intron | 40.0% |
| ! | TTTTTAAACCCAAGGAAGCC+AGG | + | chr5.1:21332894-21332913 | MS.gene068625:CDS | 40.0% |
| !! | GATCATGGTGCTGTAATAAG+TGG | + | chr5.1:21335341-21335360 | MS.gene068625:CDS | 40.0% |
| !! | GGTTTTATGCTCATGTTCCA+AGG | + | chr5.1:21335190-21335209 | MS.gene068625:CDS | 40.0% |
| !! | GTTTTGGATGATGTGTGATC+AGG | + | chr5.1:21335704-21335723 | MS.gene068625:intron | 40.0% |
| AATCAACGTGGAACCCTAAC+CGG | + | chr5.1:21334004-21334023 | MS.gene068625:CDS | 45.0% | |
| AATCCATGGATTCCATGCCT+TGG | - | chr5.1:21335801-21335820 | None:intergenic | 45.0% | |
| AGGGCATGGAGTTCTTCTAT+GGG | + | chr5.1:21332629-21332648 | MS.gene068625:CDS | 45.0% | |
| AGTAATGAGTTCCGCAATGG+TGG | + | chr5.1:21333451-21333470 | MS.gene068625:CDS | 45.0% | |
| AGTTAGTTACCTGGCTTCCT+TGG | - | chr5.1:21332906-21332925 | None:intergenic | 45.0% | |
| ATACCAAGGCATGGAATCCA+TGG | + | chr5.1:21335795-21335814 | MS.gene068625:CDS | 45.0% | |
| ATGGATTCCATGCCTTGGTA+TGG | - | chr5.1:21335796-21335815 | None:intergenic | 45.0% | |
| CAAACAGTTGGGCCATTTCT+TGG | - | chr5.1:21334776-21334795 | None:intergenic | 45.0% | |
| CAAGAAATGGCCCAACTGTT+TGG | + | chr5.1:21334774-21334793 | MS.gene068625:CDS | 45.0% | |
| CCATTGCGGAACTCATTACT+CGG | - | chr5.1:21333451-21333470 | None:intergenic | 45.0% | |
| CCCAGGATTTGCCAAAGTAA+GGG | - | chr5.1:21332205-21332224 | None:intergenic | 45.0% | |
| CCCTTACTTTGGCAAATCCT+GGG | + | chr5.1:21332202-21332221 | MS.gene068625:CDS | 45.0% | |
| CCTTACTTTGGCAAATCCTG+GGG | + | chr5.1:21332203-21332222 | MS.gene068625:CDS | 45.0% | |
| CTCTCCTTCTTGGAATTGGA+TGG | - | chr5.1:21333727-21333746 | None:intergenic | 45.0% | |
| CTTACTTTGGCAAATCCTGG+GGG | + | chr5.1:21332204-21332223 | MS.gene068625:CDS | 45.0% | |
| GAACTTACAGAGAGGCAAGT+TGG | - | chr5.1:21333511-21333530 | None:intergenic | 45.0% | |
| GACTGACAAGCATCATAGAG+AGG | - | chr5.1:21335567-21335586 | None:intergenic | 45.0% | |
| GCAAACAAGTTGTATGACCC+AGG | - | chr5.1:21334374-21334393 | None:intergenic | 45.0% | |
| GGACTTGTAAATGTCCGGTT+AGG | - | chr5.1:21334021-21334040 | None:intergenic | 45.0% | |
| GGATGATGTGTGATCAGGTT+TGG | + | chr5.1:21335709-21335728 | MS.gene068625:intron | 45.0% | |
| GGGACAGAGATAGTAGAAAC+TGG | - | chr5.1:21334954-21334973 | None:intergenic | 45.0% | |
| GGTTTAGAGACTAACTGGTC+CGG | - | chr5.1:21334890-21334909 | None:intergenic | 45.0% | |
| GTAGCCATCCAATTCCAAGA+AGG | + | chr5.1:21333720-21333739 | MS.gene068625:CDS | 45.0% | |
| GTTAGTTACCTGGCTTCCTT+GGG | - | chr5.1:21332905-21332924 | None:intergenic | 45.0% | |
| GTTGAAGCTGCATGCATCAT+TGG | - | chr5.1:21333047-21333066 | None:intergenic | 45.0% | |
| GTTTAGAGACTAACTGGTCC+GGG | - | chr5.1:21334889-21334908 | None:intergenic | 45.0% | |
| TACCTGCACTTCAGCATTAG+AGG | - | chr5.1:21335399-21335418 | None:intergenic | 45.0% | |
| TACGTCTTTGCCAGCATAGT+GGG | - | chr5.1:21333703-21333722 | None:intergenic | 45.0% | |
| TCCCTTACTTTGGCAAATCC+TGG | + | chr5.1:21332201-21332220 | MS.gene068625:CDS | 45.0% | |
| TGGCATCATGTCCCTTACTT+TGG | + | chr5.1:21332191-21332210 | MS.gene068625:CDS | 45.0% | |
| TGGGACTAGGATTTCACCTT+TGG | - | chr5.1:21332682-21332701 | None:intergenic | 45.0% | |
| TGTTGTGAAGTAGGGAGGAT+TGG | - | chr5.1:21335751-21335770 | None:intergenic | 45.0% | |
| TTACTTTGGCAAATCCTGGG+GGG | + | chr5.1:21332205-21332224 | MS.gene068625:CDS | 45.0% | |
| TTGTTCCATGGACTCTGCAA+TGG | - | chr5.1:21332559-21332578 | None:intergenic | 45.0% | |
| TTTGCCCCCCCTAATGAATA+TGG | - | chr5.1:21334131-21334150 | None:intergenic | 45.0% | |
| TTTGTAAGCACCCACTATGC+TGG | + | chr5.1:21333690-21333709 | MS.gene068625:CDS | 45.0% | |
| ! | AACTTGTTTGCATGGGTTCC+TGG | + | chr5.1:21334383-21334402 | MS.gene068625:CDS | 45.0% |
| ! | AAGGGCATGGAGTTCTTCTA+TGG | + | chr5.1:21332628-21332647 | MS.gene068625:CDS | 45.0% |
| ! | CGACTGAGAAACTTGTTCCA+TGG | - | chr5.1:21332571-21332590 | None:intergenic | 45.0% |
| ! | CTCTTTGTTGTGAAGTAGGG+AGG | - | chr5.1:21335756-21335775 | None:intergenic | 45.0% |
| ! | CTGAAAAACCCGTGGGTTTT+TGG | + | chr5.1:21333416-21333435 | MS.gene068625:CDS | 45.0% |
| ! | GAGATGATAGTGCCATACCA+AGG | + | chr5.1:21335781-21335800 | MS.gene068625:CDS | 45.0% |
| ! | GCAGATTCTGAAAAACCCGT+GGG | + | chr5.1:21333409-21333428 | MS.gene068625:CDS | 45.0% |
| ! | GTTAGGGTTCCACGTTGATT+AGG | - | chr5.1:21334004-21334023 | None:intergenic | 45.0% |
| ! | TGGACTAGAGCAGACCAAAA+TGG | + | chr5.1:21334323-21334342 | MS.gene068625:CDS | 45.0% |
| !! | AGCATTAGAGGCACTTGCTA+GGG | - | chr5.1:21335387-21335406 | None:intergenic | 45.0% |
| !! | CACGGGTTTTTCAGAATCTG+CGG | - | chr5.1:21333410-21333429 | None:intergenic | 45.0% |
| !!! | TTGAATAAATATATTTTTAT+AGG | + | chr5.1:21332774-21332793 | MS.gene068625:intron | 5.0% |
| AATTCTCCAGCTGAGCGATC+TGG | - | chr5.1:21334812-21334831 | None:intergenic | 50.0% | |
| ACAGTTGGGCCATTTCTTGG+AGG | - | chr5.1:21334773-21334792 | None:intergenic | 50.0% | |
| ACGAGGTTAGCGTAAGGCTT+TGG | - | chr5.1:21334842-21334861 | None:intergenic | 50.0% | |
| ATCATGGCAGCGAGAAAGCA+AGG | + | chr5.1:21334204-21334223 | MS.gene068625:CDS | 50.0% | |
| ATTCCTAAGACATACCCCCC+AGG | - | chr5.1:21332222-21332241 | None:intergenic | 50.0% | |
| CCCCAGGATTTGCCAAAGTA+AGG | - | chr5.1:21332206-21332225 | None:intergenic | 50.0% | |
| CCGAGTAATGAGTTCCGCAA+TGG | + | chr5.1:21333448-21333467 | MS.gene068625:CDS | 50.0% | |
| CTACGTCTTTGCCAGCATAG+TGG | - | chr5.1:21333704-21333723 | None:intergenic | 50.0% | |
| CTGTTCACGAGGTTAGCGTA+AGG | - | chr5.1:21334848-21334867 | None:intergenic | 50.0% | |
| GATAGTGCCATACCAAGGCA+TGG | + | chr5.1:21335786-21335805 | MS.gene068625:CDS | 50.0% | |
| GCATGGGTTCCTGGCTATAT+TGG | + | chr5.1:21334392-21334411 | MS.gene068625:CDS | 50.0% | |
| GGCCCAACTGTTTGGGAAAT+TGG | + | chr5.1:21334782-21334801 | MS.gene068625:CDS | 50.0% | |
| TGCCTCTAATGCTGAAGTGC+AGG | + | chr5.1:21335394-21335413 | MS.gene068625:CDS | 50.0% | |
| ! | AATCCTGGGGGGTATGTCTT+AGG | + | chr5.1:21332216-21332235 | MS.gene068625:CDS | 50.0% |
| ! | ACATTGGTCTAGCTTGGCCT+GGG | + | chr5.1:21334173-21334192 | MS.gene068625:CDS | 50.0% |
| ! | AGGGTTCCACGTTGATTAGG+TGG | - | chr5.1:21334001-21334020 | None:intergenic | 50.0% |
| ! | CGCAGATTCTGAAAAACCCG+TGG | + | chr5.1:21333408-21333427 | MS.gene068625:CDS | 50.0% |
| ! | TACATTGGTCTAGCTTGGCC+TGG | + | chr5.1:21334172-21334191 | MS.gene068625:CDS | 50.0% |
| !! | CAGCATTAGAGGCACTTGCT+AGG | - | chr5.1:21335388-21335407 | None:intergenic | 50.0% |
| GCGATTGCGATCATGTCCGT+TGG | - | chr5.1:21331993-21332012 | None:intergenic | 55.0% | |
| ! | CATTGGTCTAGCTTGGCCTG+GGG | + | chr5.1:21334174-21334193 | MS.gene068625:CDS | 55.0% |
| ! | GCTTAACGGGTCCACCATTG+CGG | - | chr5.1:21333465-21333484 | None:intergenic | 55.0% |
| GGCATTCCAGATCGCTCAGC+TGG | + | chr5.1:21334803-21334822 | MS.gene068625:CDS | 60.0% | |
| TGCCATGATCCTGCATCCCC+AGG | - | chr5.1:21334193-21334212 | None:intergenic | 60.0% | |
| CTAGCTTGGCCTGGGGATGC+AGG | + | chr5.1:21334181-21334200 | MS.gene068625:CDS | 65.0% | |
| GGCCTGGGGATGCAGGATCA+TGG | + | chr5.1:21334188-21334207 | MS.gene068625:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 21331871 | 21335977 | 21331871 | ID=MS.gene068625 |
| chr5.1 | mRNA | 21331871 | 21335977 | 21331871 | ID=MS.gene068625.t1;Parent=MS.gene068625 |
| chr5.1 | exon | 21331871 | 21331879 | 21331871 | ID=MS.gene068625.t1.exon1;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21331871 | 21331879 | 21331871 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21332177 | 21332298 | 21332177 | ID=MS.gene068625.t1.exon2;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21332177 | 21332298 | 21332177 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21332405 | 21332440 | 21332405 | ID=MS.gene068625.t1.exon3;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21332405 | 21332440 | 21332405 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21332565 | 21332684 | 21332565 | ID=MS.gene068625.t1.exon4;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21332565 | 21332684 | 21332565 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21332796 | 21332915 | 21332796 | ID=MS.gene068625.t1.exon5;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21332796 | 21332915 | 21332796 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21333060 | 21333195 | 21333060 | ID=MS.gene068625.t1.exon6;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21333060 | 21333195 | 21333060 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21333346 | 21333522 | 21333346 | ID=MS.gene068625.t1.exon7;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21333346 | 21333522 | 21333346 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21333687 | 21333842 | 21333687 | ID=MS.gene068625.t1.exon8;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21333687 | 21333842 | 21333687 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21333941 | 21334047 | 21333941 | ID=MS.gene068625.t1.exon9;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21333941 | 21334047 | 21333941 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21334141 | 21334225 | 21334141 | ID=MS.gene068625.t1.exon10;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21334141 | 21334225 | 21334141 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21334311 | 21334452 | 21334311 | ID=MS.gene068625.t1.exon11;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21334311 | 21334452 | 21334311 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21334735 | 21334894 | 21334735 | ID=MS.gene068625.t1.exon12;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21334735 | 21334894 | 21334735 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21335095 | 21335211 | 21335095 | ID=MS.gene068625.t1.exon13;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21335095 | 21335211 | 21335095 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21335292 | 21335415 | 21335292 | ID=MS.gene068625.t1.exon14;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21335292 | 21335415 | 21335292 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| chr5.1 | exon | 21335726 | 21335977 | 21335726 | ID=MS.gene068625.t1.exon15;Parent=MS.gene068625.t1 |
| chr5.1 | CDS | 21335726 | 21335977 | 21335726 | ID=cds.MS.gene068625.t1;Parent=MS.gene068625.t1 |
| Gene Sequence |
| Protein sequence |
