Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068669.t1 | XP_013464372.1 | 99.7 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 2.70E-159 | 571.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068669.t1 | Q9LRR6 | 69.7 | 287 | 81 | 1 | 17 | 297 | 39 | 325 | 3.4e-110 | 399.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068669.t1 | A0A072V9E0 | 99.7 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 2.0e-159 | 571.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051248 | MS.gene068669 | 0.813852 | 2.07E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068669.t1 | MTR_2g070540 | 99.664 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 0.0 | 615 |
MS.gene068669.t1 | MTR_3g092510 | 65.169 | 267 | 89 | 3 | 28 | 291 | 105 | 370 | 3.24e-124 | 360 |
MS.gene068669.t1 | MTR_3g092550 | 64.388 | 278 | 87 | 3 | 28 | 294 | 104 | 380 | 1.25e-121 | 353 |
MS.gene068669.t1 | MTR_3g102040 | 29.310 | 174 | 105 | 6 | 114 | 282 | 25 | 185 | 5.85e-13 | 69.3 |
MS.gene068669.t1 | MTR_4g085540 | 28.652 | 178 | 109 | 6 | 111 | 283 | 32 | 196 | 2.02e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068669.t1 | AT3G14450 | 71.080 | 287 | 77 | 1 | 17 | 297 | 39 | 325 | 6.88e-152 | 428 |
MS.gene068669.t1 | AT1G53650 | 69.643 | 280 | 69 | 5 | 17 | 294 | 38 | 303 | 7.49e-142 | 402 |
MS.gene068669.t1 | AT1G53650 | 68.440 | 282 | 75 | 4 | 17 | 294 | 38 | 309 | 1.97e-133 | 381 |
MS.gene068669.t1 | AT1G32790 | 63.971 | 272 | 93 | 1 | 28 | 294 | 83 | 354 | 4.04e-123 | 356 |
MS.gene068669.t1 | AT3G49390 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.69e-120 | 348 |
MS.gene068669.t1 | AT3G49390 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.69e-120 | 348 |
MS.gene068669.t1 | AT3G49390 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.69e-120 | 348 |
MS.gene068669.t1 | AT4G10610 | 63.941 | 269 | 86 | 2 | 28 | 291 | 66 | 328 | 2.60e-119 | 346 |
MS.gene068669.t1 | AT1G32790 | 62.692 | 260 | 92 | 1 | 28 | 282 | 83 | 342 | 2.00e-114 | 336 |
MS.gene068669.t1 | AT1G32790 | 41.975 | 81 | 46 | 1 | 210 | 290 | 173 | 252 | 2.39e-14 | 73.2 |
MS.gene068669.t1 | AT4G10610 | 62.791 | 258 | 85 | 2 | 28 | 280 | 66 | 317 | 2.79e-112 | 328 |
MS.gene068669.t1 | AT4G10610 | 38.824 | 85 | 51 | 1 | 206 | 290 | 146 | 229 | 6.28e-12 | 65.5 |
MS.gene068669.t1 | AT5G24440 | 52.837 | 282 | 120 | 2 | 17 | 289 | 36 | 313 | 2.40e-99 | 295 |
MS.gene068669.t1 | AT5G24440 | 41.860 | 86 | 49 | 1 | 205 | 290 | 132 | 216 | 8.45e-14 | 71.2 |
Find 64 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCATACCCTTCGATTGTT+TGG | 0.222316 | 2.2:+21315658 | None:intergenic |
CTGAATTCAGATTCAGCTTT+TGG | 0.224207 | 2.2:+21315844 | None:intergenic |
GGTTACGCGCTTGAGGCTTT+TGG | 0.235319 | 2.2:-21311623 | MS.gene068669:CDS |
TTGTCCACAATTGGTGAATA+AGG | 0.247931 | 2.2:+21314439 | None:intergenic |
AAACTGTAGCGGCATGCTTT+TGG | 0.294414 | 2.2:-21310793 | MS.gene068669:CDS |
CGTTCAACCTTCTCCTCCCT+TGG | 0.306807 | 2.2:+21314668 | None:intergenic |
GCTTAGTGTTGACCAGAAAA+TGG | 0.311863 | 2.2:+21315701 | None:intergenic |
TTGTACAAATATTGACAAAA+AGG | 0.314486 | 2.2:-21312068 | MS.gene068669:intron |
TTCAGCTGATGCCAACAAAA+TGG | 0.330118 | 2.2:-21315875 | MS.gene068669:CDS |
ATCATACCCTTCGATTGTTT+GGG | 0.345576 | 2.2:+21315659 | None:intergenic |
ATAACTTACTTGTCCACAAT+TGG | 0.377012 | 2.2:+21314430 | None:intergenic |
GGCCTCACTGGAGTCTTTGA+AGG | 0.384362 | 2.2:+21310646 | None:intergenic |
CGAGCAACCCTTGGCCTCAC+TGG | 0.390725 | 2.2:+21310634 | None:intergenic |
AACCTTGGTGGTACTGTGCT+TGG | 0.416008 | 2.2:-21312345 | MS.gene068669:CDS |
AATGCGGATCACCACAAATT+CGG | 0.432023 | 2.2:+21312559 | None:intergenic |
GTTCAACCTTCTCCTCCCTT+GGG | 0.452495 | 2.2:+21314669 | None:intergenic |
TGACGGCCATGATCATGATT+AGG | 0.454312 | 2.2:+21315748 | None:intergenic |
GTTCACAAAGCTGAATCCTT+TGG | 0.463673 | 2.2:-21315800 | MS.gene068669:CDS |
ATAATGGTACCAAACCTGAT+AGG | 0.472253 | 2.2:+21310762 | None:intergenic |
GTCATTGATTGCCGAATTTG+TGG | 0.473392 | 2.2:-21312570 | MS.gene068669:CDS |
CCGATCGGTTAACGCGATAC+AGG | 0.479639 | 2.2:+21310610 | None:intergenic |
TGAATCCTACATTCCTCCCC+AGG | 0.485315 | 2.2:-21312275 | MS.gene068669:CDS |
TTCGAAGGAAGGACCCTCAC+TGG | 0.492340 | 2.2:+21312315 | None:intergenic |
CAAAGACTCCAGTGAGGCCA+AGG | 0.492377 | 2.2:-21310642 | MS.gene068669:CDS |
CATGCAGTCGGATGATGAGC+GGG | 0.512341 | 2.2:-21312113 | MS.gene068669:intron |
GTGTTGACCAGAAAATGGTT+AGG | 0.517283 | 2.2:+21315706 | None:intergenic |
CATACCCTGGGGAGGAATGT+AGG | 0.517978 | 2.2:+21312270 | None:intergenic |
GGGAGGAATGTAGGATTCAC+AGG | 0.522132 | 2.2:+21312279 | None:intergenic |
TATTCTCCTAATCATGATCA+TGG | 0.524419 | 2.2:-21315754 | MS.gene068669:CDS |
GCAAGGGCAGCTTTAAACCT+TGG | 0.527689 | 2.2:-21312360 | MS.gene068669:CDS |
GCAGCCTTATTCACCAATTG+TGG | 0.527712 | 2.2:-21314443 | MS.gene068669:CDS |
TGATGAGATTAAACCCTTGA+CGG | 0.534141 | 2.2:+21315731 | None:intergenic |
ATCATGATCATGGCCGTCAA+GGG | 0.543640 | 2.2:-21315744 | MS.gene068669:CDS |
TTTCACAGGTTACGCGCTTG+AGG | 0.557575 | 2.2:-21311630 | MS.gene068669:intron |
GATACAGGACGAGCAACCCT+TGG | 0.563628 | 2.2:+21310625 | None:intergenic |
AAAGCTGAATCCTTTGGCTA+AGG | 0.568332 | 2.2:-21315794 | MS.gene068669:CDS |
TCATGTCAACAGATGGTGCA+AGG | 0.569752 | 2.2:-21312377 | MS.gene068669:intron |
ATAATAACCCAAACAATCGA+AGG | 0.576301 | 2.2:-21315666 | MS.gene068669:CDS |
TGATTAGGAGAATAAGATGA+AGG | 0.576404 | 2.2:+21315763 | None:intergenic |
GTTGAACGGAAGATCGCTAA+AGG | 0.577137 | 2.2:-21314653 | MS.gene068669:CDS |
GGGTTATTATCATTAGCAGA+AGG | 0.581158 | 2.2:+21315679 | None:intergenic |
CAATTCGAGTTGAATGCACC+TGG | 0.583914 | 2.2:+21311596 | None:intergenic |
AACTTCTTTGAATCATCATG+TGG | 0.584423 | 2.2:-21311745 | MS.gene068669:CDS |
AATCATGATCATGGCCGTCA+AGG | 0.590810 | 2.2:-21315745 | MS.gene068669:CDS |
AGCAGTAACAACAGTTGCCA+TGG | 0.591951 | 2.2:+21315903 | None:intergenic |
ATGAGCGGGAAATGTGTACC+AGG | 0.597275 | 2.2:-21312099 | MS.gene068669:CDS |
GGAATGTAGGATTCACAGGA+AGG | 0.618003 | 2.2:+21312283 | None:intergenic |
ATTTGTACAATAGACAGTCC+TGG | 0.620124 | 2.2:+21312081 | None:intergenic |
AGGGCAGCTTTAAACCTTGG+TGG | 0.621096 | 2.2:-21312357 | MS.gene068669:CDS |
CTTTGAATCATCATGTGGCG+AGG | 0.622886 | 2.2:-21311740 | MS.gene068669:intron |
CATGTCAACAGATGGTGCAA+GGG | 0.627275 | 2.2:-21312376 | MS.gene068669:intron |
GCTTGGATACTATCCAGTGA+GGG | 0.628896 | 2.2:-21312328 | MS.gene068669:CDS |
AAAGACTCCAGTGAGGCCAA+GGG | 0.631851 | 2.2:-21310641 | MS.gene068669:CDS |
ACATGCAGTCGGATGATGAG+CGG | 0.641380 | 2.2:-21312114 | MS.gene068669:intron |
AAAATATTCATACCCTGGGG+AGG | 0.643159 | 2.2:+21312262 | None:intergenic |
TAATAACCCAAACAATCGAA+GGG | 0.646031 | 2.2:-21315665 | MS.gene068669:intron |
GCTACAGTTTAGTGCAACAA+TGG | 0.660726 | 2.2:+21310806 | None:intergenic |
GCAAAGCGAAGAACTGAATG+CGG | 0.663672 | 2.2:+21312543 | None:intergenic |
CAAGGGAGGAGAAGGTTGAA+CGG | 0.663891 | 2.2:-21314667 | MS.gene068669:CDS |
GAATCCTACATTCCTCCCCA+GGG | 0.668990 | 2.2:-21312274 | MS.gene068669:intron |
ATTGTTGCACTAAACTGTAG+CGG | 0.677875 | 2.2:-21310804 | MS.gene068669:CDS |
TGCTTGGATACTATCCAGTG+AGG | 0.696812 | 2.2:-21312329 | MS.gene068669:CDS |
ATCCAAGCACAGTACCACCA+AGG | 0.728153 | 2.2:+21312343 | None:intergenic |
GTCCTTCAAAGACTCCAGTG+AGG | 0.760009 | 2.2:-21310648 | MS.gene068669:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATAATTATTTAAATATGG+CGG | + | chr2.2:21313902-21313921 | None:intergenic | 10.0% |
!!! | AAAAAAAAAAAATTCACTTT+TGG | - | chr2.2:21311221-21311240 | MS.gene068669:intron | 10.0% |
!!! | ACATAAAATCAAAAATATTT+TGG | - | chr2.2:21314315-21314334 | MS.gene068669:intron | 10.0% |
!!! | ATGAAATGATTATTTTATTA+TGG | + | chr2.2:21314810-21314829 | None:intergenic | 10.0% |
!!! | CTTTAAAATATTTACAAAAT+AGG | + | chr2.2:21315575-21315594 | None:intergenic | 10.0% |
!!! | GTTCTTTTAAATTATTTTTT+TGG | - | chr2.2:21312658-21312677 | MS.gene068669:intron | 10.0% |
!!! | TGCTTAATAATTTTTTAATA+TGG | - | chr2.2:21312156-21312175 | MS.gene068669:intron | 10.0% |
!!! | TTTTGATTTTTTTTTTGTTT+TGG | - | chr2.2:21311032-21311051 | MS.gene068669:intron | 10.0% |
!! | AAAAAATAACAATCAAAATG+AGG | + | chr2.2:21310903-21310922 | None:intergenic | 15.0% |
!! | AAAAATAACAATCAAAATGA+GGG | + | chr2.2:21310902-21310921 | None:intergenic | 15.0% |
!! | AAAAATTATTAAGCATGTAA+CGG | + | chr2.2:21312151-21312170 | None:intergenic | 15.0% |
!! | AGTAATGAAATATGATTTAT+CGG | + | chr2.2:21312834-21312853 | None:intergenic | 15.0% |
!! | CAATAAATGCATAAAATATT+AGG | + | chr2.2:21313804-21313823 | None:intergenic | 15.0% |
!! | TAAAAGTTATTTATCTCAAA+AGG | - | chr2.2:21314839-21314858 | MS.gene068669:intron | 15.0% |
!! | TAAATAAATGCAAATTTAAG+TGG | - | chr2.2:21315526-21315545 | MS.gene068669:intron | 15.0% |
!! | TGAGAAAATTAAAGAAATAA+CGG | + | chr2.2:21312428-21312447 | None:intergenic | 15.0% |
!! | TTAAGAGAATCAATATAAAA+AGG | + | chr2.2:21314356-21314375 | None:intergenic | 15.0% |
!! | TTAGTCAATACTTTATTAAT+TGG | - | chr2.2:21314986-21315005 | MS.gene068669:intron | 15.0% |
!!! | CTAATATTTTATGCATTTAT+TGG | - | chr2.2:21313802-21313821 | MS.gene068669:intron | 15.0% |
!!! | TAACATTTTATTACATCATT+TGG | - | chr2.2:21313919-21313938 | MS.gene068669:intron | 15.0% |
!!! | TATATTGTAACAGATATTTT+TGG | - | chr2.2:21314512-21314531 | MS.gene068669:intron | 15.0% |
!! | AAATACAACCAATTATAGAA+AGG | + | chr2.2:21314288-21314307 | None:intergenic | 20.0% |
!! | AACAAAGTTGAAGTTATTTA+TGG | + | chr2.2:21315049-21315068 | None:intergenic | 20.0% |
!! | AGACAATATATAGAAGATAA+AGG | + | chr2.2:21313726-21313745 | None:intergenic | 20.0% |
!! | CATGATCAAAATAATGAAAT+AGG | + | chr2.2:21314118-21314137 | None:intergenic | 20.0% |
!! | CTGTCATTATTATATTAACT+TGG | - | chr2.2:21315627-21315646 | MS.gene068669:intron | 20.0% |
!! | GGTTTAAAAGATTCAAAAAT+TGG | - | chr2.2:21314578-21314597 | MS.gene068669:intron | 20.0% |
!! | TAAATTACAAACAAATCACA+CGG | + | chr2.2:21311375-21311394 | None:intergenic | 20.0% |
!! | TCAATTTAGTGAAATAAAGT+AGG | - | chr2.2:21311159-21311178 | MS.gene068669:intron | 20.0% |
!! | TTGTACAAATATTGACAAAA+AGG | - | chr2.2:21314451-21314470 | MS.gene068669:CDS | 20.0% |
!! | TTTCTATAATTGGTTGTATT+TGG | - | chr2.2:21314287-21314306 | MS.gene068669:intron | 20.0% |
!! | TTTGCATTTATTTAAATGAC+TGG | + | chr2.2:21315520-21315539 | None:intergenic | 20.0% |
!!! | AACTATGATCTCTTTAATTT+TGG | - | chr2.2:21313649-21313668 | MS.gene068669:intron | 20.0% |
!!! | CTATTTCATTATTTTGATCA+TGG | - | chr2.2:21314116-21314135 | MS.gene068669:intron | 20.0% |
!!! | CTGTTTTCTATTATCAAAAT+CGG | + | chr2.2:21312006-21312025 | None:intergenic | 20.0% |
!!! | GATCATATTTTATTATCCTT+CGG | - | chr2.2:21315834-21315853 | MS.gene068669:CDS | 20.0% |
!!! | TTATCTCAAAAGGTAAATTT+TGG | - | chr2.2:21314849-21314868 | MS.gene068669:intron | 20.0% |
! | ATAATGCATCCATGAATTAT+CGG | - | chr2.2:21314658-21314677 | MS.gene068669:CDS | 25.0% |
! | ATACAAAACACTGCATTTAA+GGG | + | chr2.2:21313307-21313326 | None:intergenic | 25.0% |
! | ATTTATGTTTACTACATTCG+TGG | - | chr2.2:21311390-21311409 | MS.gene068669:intron | 25.0% |
! | GACTTGTAGAAGAAATTAAT+GGG | + | chr2.2:21312481-21312500 | None:intergenic | 25.0% |
! | TAAATAAGAGAAAAGACAAC+AGG | + | chr2.2:21311621-21311640 | None:intergenic | 25.0% |
! | TAACCTAAAACAAGAAAAGA+TGG | + | chr2.2:21312042-21312061 | None:intergenic | 25.0% |
! | TAATTAGTGTTGTCAAATTG+TGG | - | chr2.2:21315203-21315222 | MS.gene068669:intron | 25.0% |
! | TAATTATTTAAATATGGCGG+TGG | + | chr2.2:21313899-21313918 | None:intergenic | 25.0% |
! | TATAATTGGTTGTATTTGGA+TGG | - | chr2.2:21314291-21314310 | MS.gene068669:intron | 25.0% |
! | TATTACATCATTTGGATTGA+AGG | - | chr2.2:21313927-21313946 | MS.gene068669:intron | 25.0% |
! | TTGGTTCAGAAGAAATTAAT+GGG | + | chr2.2:21312457-21312476 | None:intergenic | 25.0% |
! | TTTCCAATCAACAAGATATA+GGG | + | chr2.2:21311097-21311116 | None:intergenic | 25.0% |
! | TTTCTGTTCCTTTCTATAAT+TGG | - | chr2.2:21314277-21314296 | MS.gene068669:intron | 25.0% |
!! | AATCTTTTAAACCATTTGAG+CGG | + | chr2.2:21314571-21314590 | None:intergenic | 25.0% |
!! | ACATAACAAAGTATCAGAAT+AGG | + | chr2.2:21312265-21312284 | None:intergenic | 25.0% |
!! | AGGGCATAATTTTCAAATTA+AGG | + | chr2.2:21312868-21312887 | None:intergenic | 25.0% |
!! | CATTTTATGACACCTTAAAA+TGG | - | chr2.2:21313053-21313072 | MS.gene068669:intron | 25.0% |
!! | TAACAGATCTGCATTTTATT+CGG | + | chr2.2:21312808-21312827 | None:intergenic | 25.0% |
!! | TATTCTGATACTTTGTTATG+TGG | - | chr2.2:21312264-21312283 | MS.gene068669:intron | 25.0% |
!! | TTTGGTTCAGAAGAAATTAA+TGG | + | chr2.2:21312458-21312477 | None:intergenic | 25.0% |
!! | TTTGTGATGATTTTTGTGAT+GGG | - | chr2.2:21310947-21310966 | MS.gene068669:intron | 25.0% |
!! | TTTTCACATAACATATTCGT+AGG | + | chr2.2:21311691-21311710 | None:intergenic | 25.0% |
!! | TTTTCCAATCAACAAGATAT+AGG | + | chr2.2:21311098-21311117 | None:intergenic | 25.0% |
!! | TTTTGTGATGATTTTTGTGA+TGG | - | chr2.2:21310946-21310965 | MS.gene068669:intron | 25.0% |
!!! | AGCTTTTTATTGTTGTTACA+GGG | - | chr2.2:21313169-21313188 | MS.gene068669:intron | 25.0% |
!!! | GAATGAAAAGTTGATAGTAA+CGG | + | chr2.2:21312327-21312346 | None:intergenic | 25.0% |
!!! | GGTAAAACTACTTTTAGTTT+AGG | - | chr2.2:21314533-21314552 | MS.gene068669:intron | 25.0% |
!!! | TATACAGACTCTTTGTTTTA+AGG | + | chr2.2:21311265-21311284 | None:intergenic | 25.0% |
!!! | TTTTCTGCAGTTTTTTTGTA+TGG | - | chr2.2:21311118-21311137 | MS.gene068669:intron | 25.0% |
AAACCCTATATCTTGTTGAT+TGG | - | chr2.2:21311091-21311110 | MS.gene068669:intron | 30.0% | |
AACAGAAAATATTCATACCC+TGG | + | chr2.2:21314265-21314284 | None:intergenic | 30.0% | |
AACTTCTTTGAATCATCATG+TGG | - | chr2.2:21314774-21314793 | MS.gene068669:intron | 30.0% | |
ACACGTAACAACAAATCAAA+AGG | + | chr2.2:21313540-21313559 | None:intergenic | 30.0% | |
ACAGAAAATATTCATACCCT+GGG | + | chr2.2:21314264-21314283 | None:intergenic | 30.0% | |
ACTGCATGTTACAAAAGAAA+CGG | + | chr2.2:21314394-21314413 | None:intergenic | 30.0% | |
AGAAAGGAAGAAAATCATGA+TGG | + | chr2.2:21315093-21315112 | None:intergenic | 30.0% | |
AGGAATTGTTAACTGTGATA+TGG | - | chr2.2:21311198-21311217 | MS.gene068669:intron | 30.0% | |
AGTTGAAGTTATTTATGGTG+CGG | + | chr2.2:21315044-21315063 | None:intergenic | 30.0% | |
ATAACTTACTTGTCCACAAT+TGG | + | chr2.2:21312092-21312111 | None:intergenic | 30.0% | |
ATAATAACCCAAACAATCGA+AGG | - | chr2.2:21310853-21310872 | MS.gene068669:intron | 30.0% | |
CAAAAACTATCCTCCAATAA+TGG | + | chr2.2:21315776-21315795 | None:intergenic | 30.0% | |
CACAATCAAAACGAATCAAA+AGG | + | chr2.2:21313605-21313624 | None:intergenic | 30.0% | |
CACCTTAAAATGGAGAAATT+TGG | - | chr2.2:21313063-21313082 | MS.gene068669:intron | 30.0% | |
CATACAAAACACTGCATTTA+AGG | + | chr2.2:21313308-21313327 | None:intergenic | 30.0% | |
CATATATGTAAACGACAGAA+AGG | + | chr2.2:21312366-21312385 | None:intergenic | 30.0% | |
CATCATGAATGTTCAACATA+TGG | + | chr2.2:21312238-21312257 | None:intergenic | 30.0% | |
CGAATATGTTATGTGAAAAC+TGG | - | chr2.2:21311692-21311711 | MS.gene068669:intron | 30.0% | |
CGACTTGTAGAAGAAATTAA+TGG | + | chr2.2:21312482-21312501 | None:intergenic | 30.0% | |
CGTAGTTGTTAATTAAGTAG+GGG | - | chr2.2:21315443-21315462 | MS.gene068669:intron | 30.0% | |
CTCAAGAAGGAAGAAATAAA+CGG | + | chr2.2:21315680-21315699 | None:intergenic | 30.0% | |
GCGTAGTTGTTAATTAAGTA+GGG | - | chr2.2:21315442-21315461 | MS.gene068669:intron | 30.0% | |
GTGAAATACACTGTTGTAAA+TGG | - | chr2.2:21312712-21312731 | MS.gene068669:intron | 30.0% | |
TAATAACCCAAACAATCGAA+GGG | - | chr2.2:21310854-21310873 | MS.gene068669:intron | 30.0% | |
TATTCTCCTAATCATGATCA+TGG | - | chr2.2:21310765-21310784 | MS.gene068669:intron | 30.0% | |
TGATTAGGAGAATAAGATGA+AGG | + | chr2.2:21310759-21310778 | None:intergenic | 30.0% | |
TTGTCGTTATTCGATTTCAT+TGG | - | chr2.2:21311516-21311535 | MS.gene068669:intron | 30.0% | |
TTTGTAAAGCTTAACTCAAC+TGG | - | chr2.2:21312515-21312534 | MS.gene068669:intron | 30.0% | |
! | AAGCAGTGTTGTTAAATATC+GGG | - | chr2.2:21312954-21312973 | MS.gene068669:intron | 30.0% |
! | AATACTAGTGTTGTTAGTCA+TGG | + | chr2.2:21315360-21315379 | None:intergenic | 30.0% |
! | AGCCAAATTTCTCCATTTTA+AGG | + | chr2.2:21313068-21313087 | None:intergenic | 30.0% |
! | ATCTGCATTTTATTCGGTTA+AGG | + | chr2.2:21312802-21312821 | None:intergenic | 30.0% |
! | ATGAGTCTTCATTGATTGAT+TGG | - | chr2.2:21312110-21312129 | MS.gene068669:intron | 30.0% |
! | GAAGCAGTGTTGTTAAATAT+CGG | - | chr2.2:21312953-21312972 | MS.gene068669:intron | 30.0% |
! | TTTCTTTTGTAACATGCAGT+CGG | - | chr2.2:21314394-21314413 | MS.gene068669:intron | 30.0% |
!! | CAAGCATAACAATTTTGGTA+TGG | + | chr2.2:21312541-21312560 | None:intergenic | 30.0% |
!! | CAGCTTTTTATTGTTGTTAC+AGG | - | chr2.2:21313168-21313187 | MS.gene068669:intron | 30.0% |
!! | GTAGAAGAAATTAATGGGTT+TGG | + | chr2.2:21312476-21312495 | None:intergenic | 30.0% |
!! | GTCATTTTAACATGTTTACC+AGG | - | chr2.2:21314630-21314649 | MS.gene068669:CDS | 30.0% |
!! | TACAAAGTGTTGTCAAATAG+CGG | - | chr2.2:21315283-21315302 | MS.gene068669:intron | 30.0% |
!! | TGATTTGTTGTTACGTGTTA+AGG | - | chr2.2:21313542-21313561 | MS.gene068669:intron | 30.0% |
!! | TTTTTATTGTTGTTACAGGG+AGG | - | chr2.2:21313172-21313191 | MS.gene068669:intron | 30.0% |
!!! | ACACCATCTTTTCTTGTTTT+AGG | - | chr2.2:21312036-21312055 | MS.gene068669:intron | 30.0% |
!!! | GCAGTTTTTTTGTATGGTAA+AGG | - | chr2.2:21311124-21311143 | MS.gene068669:intron | 30.0% |
!!! | TTTCTTGTTTTAGGTTACTG+AGG | - | chr2.2:21312045-21312064 | MS.gene068669:intron | 30.0% |
AAAACTCACAAAGCGATAGA+GGG | - | chr2.2:21313222-21313241 | MS.gene068669:intron | 35.0% | |
AAACACTGCATTTAAGGGTT+TGG | + | chr2.2:21313302-21313321 | None:intergenic | 35.0% | |
AAATGCAAATTTAAGTGGCG+TGG | - | chr2.2:21315531-21315550 | MS.gene068669:intron | 35.0% | |
AACACTGCATTTAAGGGTTT+GGG | + | chr2.2:21313301-21313320 | None:intergenic | 35.0% | |
AATAAAAAGCTGTCTACCTC+TGG | + | chr2.2:21313160-21313179 | None:intergenic | 35.0% | |
AATCATACCCTTCGATTGTT+TGG | + | chr2.2:21310864-21310883 | None:intergenic | 35.0% | |
ACACAGAGAATGACAATATC+AGG | + | chr2.2:21311784-21311803 | None:intergenic | 35.0% | |
ACTGAAATTGTCAACGATTG+CGG | + | chr2.2:21311453-21311472 | None:intergenic | 35.0% | |
AGTTAACAATTCCTGATGCA+TGG | + | chr2.2:21311192-21311211 | None:intergenic | 35.0% | |
AGTTGAATTGTCGAAGAGAA+AGG | + | chr2.2:21313750-21313769 | None:intergenic | 35.0% | |
ATAATGGTACCAAACCTGAT+AGG | + | chr2.2:21315760-21315779 | None:intergenic | 35.0% | |
ATAATTGTTGACCGCTCAAA+TGG | - | chr2.2:21314557-21314576 | MS.gene068669:intron | 35.0% | |
ATATGACACGTATCATGCTA+TGG | - | chr2.2:21311661-21311680 | MS.gene068669:intron | 35.0% | |
ATCATACCCTTCGATTGTTT+GGG | + | chr2.2:21310863-21310882 | None:intergenic | 35.0% | |
ATGGAATTCATGTCAACAGA+TGG | - | chr2.2:21314135-21314154 | MS.gene068669:intron | 35.0% | |
ATTATCCTTCGGATTCTGTA+GGG | - | chr2.2:21315845-21315864 | MS.gene068669:CDS | 35.0% | |
ATTGTGCCTTAACACATAGT+AGG | + | chr2.2:21313486-21313505 | None:intergenic | 35.0% | |
ATTGTTGCACTAAACTGTAG+CGG | - | chr2.2:21315715-21315734 | MS.gene068669:CDS | 35.0% | |
ATTTGTACAATAGACAGTCC+TGG | + | chr2.2:21314441-21314460 | None:intergenic | 35.0% | |
CAGAAAATATTCATACCCTG+GGG | + | chr2.2:21314263-21314282 | None:intergenic | 35.0% | |
CATGTAACTCCGATAATTCA+TGG | + | chr2.2:21314670-21314689 | None:intergenic | 35.0% | |
CCAATTTGTGAAAGATTGCA+GGG | - | chr2.2:21313016-21313035 | MS.gene068669:intron | 35.0% | |
CGCGTAGTTGTTAATTAAGT+AGG | - | chr2.2:21315441-21315460 | MS.gene068669:intron | 35.0% | |
CGCGTCAATAAGGAAAATAA+CGG | + | chr2.2:21315425-21315444 | None:intergenic | 35.0% | |
CTTGGTTAAAAGATCGTCAT+AGG | + | chr2.2:21313422-21313441 | None:intergenic | 35.0% | |
CTTTACAAGAACAATGCACT+GGG | + | chr2.2:21315164-21315183 | None:intergenic | 35.0% | |
GCGAGACAGATAATTAAGAA+AGG | + | chr2.2:21315109-21315128 | None:intergenic | 35.0% | |
GCGTCAATAAGGAAAATAAC+GGG | + | chr2.2:21315424-21315443 | None:intergenic | 35.0% | |
GGGTTATTATCATTAGCAGA+AGG | + | chr2.2:21310843-21310862 | None:intergenic | 35.0% | |
GGTTAATAAGTAGCACTTCT+TGG | - | chr2.2:21314599-21314618 | MS.gene068669:CDS | 35.0% | |
GTTTGAATTTCACTACACTG+CGG | + | chr2.2:21315317-21315336 | None:intergenic | 35.0% | |
TAACACATAGTAGGATCACA+TGG | + | chr2.2:21313477-21313496 | None:intergenic | 35.0% | |
TACATCACCAAAAAACACGT+GGG | - | chr2.2:21314062-21314081 | MS.gene068669:intron | 35.0% | |
TATATGCTTTCTCTTGAGTG+TGG | - | chr2.2:21312380-21312399 | MS.gene068669:intron | 35.0% | |
TATTATCCTTCGGATTCTGT+AGG | - | chr2.2:21315844-21315863 | MS.gene068669:CDS | 35.0% | |
TCTTCTACAAGTCGTATAGA+AGG | - | chr2.2:21312488-21312507 | MS.gene068669:intron | 35.0% | |
TGATGAGATTAAACCCTTGA+CGG | + | chr2.2:21310791-21310810 | None:intergenic | 35.0% | |
TGTGATCCTACTATGTGTTA+AGG | - | chr2.2:21313477-21313496 | MS.gene068669:intron | 35.0% | |
TGTTCAACATATGGCACAAT+TGG | + | chr2.2:21312229-21312248 | None:intergenic | 35.0% | |
TTAACAACTACGCGTCAATA+AGG | + | chr2.2:21315435-21315454 | None:intergenic | 35.0% | |
TTACATCACCAAAAAACACG+TGG | - | chr2.2:21314061-21314080 | MS.gene068669:intron | 35.0% | |
TTGTCCACAATTGGTGAATA+AGG | + | chr2.2:21312083-21312102 | None:intergenic | 35.0% | |
! | AGCAGTGTTGTTAAATATCG+GGG | - | chr2.2:21312955-21312974 | MS.gene068669:intron | 35.0% |
! | AGGAGAAACAATTTTACCCA+AGG | - | chr2.2:21311834-21311853 | MS.gene068669:intron | 35.0% |
! | ATCAGGTTTGGTACCATTAT+TGG | - | chr2.2:21315760-21315779 | MS.gene068669:CDS | 35.0% |
! | CAACTTTTCATTCAACTACG+TGG | - | chr2.2:21312334-21312353 | MS.gene068669:CDS | 35.0% |
! | CTGAATTCAGATTCAGCTTT+TGG | + | chr2.2:21310678-21310697 | None:intergenic | 35.0% |
! | GGAGAAACAATTTTACCCAA+GGG | - | chr2.2:21311835-21311854 | MS.gene068669:intron | 35.0% |
! | GGTGTCAAGCATAACAATTT+TGG | + | chr2.2:21312546-21312565 | None:intergenic | 35.0% |
! | TGCTTTTGTGGAATTTGCAA+TGG | - | chr2.2:21314944-21314963 | MS.gene068669:intron | 35.0% |
! | TTATTTCTTCCTTCTTGAGC+AGG | - | chr2.2:21315681-21315700 | MS.gene068669:CDS | 35.0% |
!! | AGAAATTTGGCTTTCTGACA+TGG | - | chr2.2:21313076-21313095 | MS.gene068669:intron | 35.0% |
!! | TTCAACTCGAATTGCTTTTG+TGG | - | chr2.2:21314932-21314951 | MS.gene068669:intron | 35.0% |
!!! | GATTTTTTTCTCAACAGCGA+TGG | - | chr2.2:21312993-21313012 | MS.gene068669:intron | 35.0% |
!!! | TGATTCGTTTTGATTGTGTC+TGG | - | chr2.2:21313607-21313626 | MS.gene068669:intron | 35.0% |
!!! | TGGTTTTGAGTCCATTTTGT+TGG | + | chr2.2:21310658-21310677 | None:intergenic | 35.0% |
AAAATATTCATACCCTGGGG+AGG | + | chr2.2:21314260-21314279 | None:intergenic | 40.0% | |
AAAGCGTGTTTGCAATGCAA+TGG | - | chr2.2:21315392-21315411 | MS.gene068669:intron | 40.0% | |
AAAGCTGAATCCTTTGGCTA+AGG | - | chr2.2:21310725-21310744 | MS.gene068669:intron | 40.0% | |
AACATATGGCACAATTGGAG+GGG | + | chr2.2:21312224-21312243 | None:intergenic | 40.0% | |
AATGATTCATGCACGTGATG+AGG | + | chr2.2:21315491-21315510 | None:intergenic | 40.0% | |
AATGCGGATCACCACAAATT+CGG | + | chr2.2:21313963-21313982 | None:intergenic | 40.0% | |
ACATTGCCTTTCCATTTCAC+AGG | - | chr2.2:21314875-21314894 | MS.gene068669:intron | 40.0% | |
ACTGCTCACAAGCATAAAGA+TGG | - | chr2.2:21313121-21313140 | MS.gene068669:intron | 40.0% | |
AGACAGTATTCCAATGTTGC+TGG | - | chr2.2:21312191-21312210 | MS.gene068669:intron | 40.0% | |
AGAGAAACCGATATGTTGAC+TGG | - | chr2.2:21315654-21315673 | MS.gene068669:intron | 40.0% | |
ATGGATGCATTATGCTATCC+TGG | + | chr2.2:21314651-21314670 | None:intergenic | 40.0% | |
CAAAACTCACAAAGCGATAG+AGG | - | chr2.2:21313221-21313240 | MS.gene068669:intron | 40.0% | |
CAACATATGGCACAATTGGA+GGG | + | chr2.2:21312225-21312244 | None:intergenic | 40.0% | |
CATAAAATGTCATCGCGTTG+CGG | + | chr2.2:21313042-21313061 | None:intergenic | 40.0% | |
CCAGTGCATTGTTCTTGTAA+AGG | - | chr2.2:21315162-21315181 | MS.gene068669:intron | 40.0% | |
CCCTGCAATCTTTCACAAAT+TGG | + | chr2.2:21313019-21313038 | None:intergenic | 40.0% | |
CCTTTACAAGAACAATGCAC+TGG | + | chr2.2:21315165-21315184 | None:intergenic | 40.0% | |
GCCAATTTGTGAAAGATTGC+AGG | - | chr2.2:21313015-21313034 | MS.gene068669:intron | 40.0% | |
GCTACAGTTTAGTGCAACAA+TGG | + | chr2.2:21315716-21315735 | None:intergenic | 40.0% | |
GGAAAAAACTCCTTAGCCAA+AGG | + | chr2.2:21310738-21310757 | None:intergenic | 40.0% | |
GTTCACAAAGCTGAATCCTT+TGG | - | chr2.2:21310719-21310738 | MS.gene068669:intron | 40.0% | |
TAAACGGCCAGTCAACATAT+CGG | + | chr2.2:21315664-21315683 | None:intergenic | 40.0% | |
TAACCAAGTCCACACTAGAA+GGG | - | chr2.2:21313434-21313453 | MS.gene068669:intron | 40.0% | |
TCAACATATGGCACAATTGG+AGG | + | chr2.2:21312226-21312245 | None:intergenic | 40.0% | |
TTAACCAAGTCCACACTAGA+AGG | - | chr2.2:21313433-21313452 | MS.gene068669:intron | 40.0% | |
TTCAGCTGATGCCAACAAAA+TGG | - | chr2.2:21310644-21310663 | MS.gene068669:CDS | 40.0% | |
TTGTGTCTGGACTGTGAATT+TGG | - | chr2.2:21313620-21313639 | MS.gene068669:intron | 40.0% | |
! | AATCCAGGTCAGATTTTCGA+TGG | + | chr2.2:21313272-21313291 | None:intergenic | 40.0% |
! | AGGTTTGGTACCATTATTGG+AGG | - | chr2.2:21315763-21315782 | MS.gene068669:CDS | 40.0% |
! | AGTGTTGTTAAATATCGGGG+CGG | - | chr2.2:21312958-21312977 | MS.gene068669:intron | 40.0% |
! | ATCCAGGTCAGATTTTCGAT+GGG | + | chr2.2:21313271-21313290 | None:intergenic | 40.0% |
! | ATTGTTTCTCCTCTGCAAGA+AGG | + | chr2.2:21311826-21311845 | None:intergenic | 40.0% |
! | CATCACTCCTAACCATTTTC+TGG | - | chr2.2:21310806-21310825 | MS.gene068669:CDS | 40.0% |
! | GAAACAATTTTACCCAAGGG+AGG | - | chr2.2:21311838-21311857 | MS.gene068669:intron | 40.0% |
! | GTCATTGATTGCCGAATTTG+TGG | - | chr2.2:21313949-21313968 | MS.gene068669:intron | 40.0% |
! | GTGTTGACCAGAAAATGGTT+AGG | + | chr2.2:21310816-21310835 | None:intergenic | 40.0% |
! | TGAATTGTGTTTGTGCTGCT+TGG | - | chr2.2:21310997-21311016 | MS.gene068669:intron | 40.0% |
!! | GCTTAGTGTTGACCAGAAAA+TGG | + | chr2.2:21310821-21310840 | None:intergenic | 40.0% |
!!! | GTATTTTGGGATAGTCCGTT+GGG | + | chr2.2:21312900-21312919 | None:intergenic | 40.0% |
!!! | TGTTTTAGGTTACTGAGGAG+CGG | - | chr2.2:21312050-21312069 | MS.gene068669:intron | 40.0% |
AACCAAGTCCACACTAGAAG+GGG | - | chr2.2:21313435-21313454 | MS.gene068669:intron | 45.0% | |
AAGTGTGCCTCGAAATGCAT+AGG | + | chr2.2:21315136-21315155 | None:intergenic | 45.0% | |
AATCATGATCATGGCCGTCA+AGG | - | chr2.2:21310774-21310793 | MS.gene068669:intron | 45.0% | |
ACTTACCCTACAGAATCCGA+AGG | + | chr2.2:21315853-21315872 | None:intergenic | 45.0% | |
AGAAGGGGAGGAATACTCAT+AGG | - | chr2.2:21313450-21313469 | MS.gene068669:intron | 45.0% | |
ATCATGATCATGGCCGTCAA+GGG | - | chr2.2:21310775-21310794 | MS.gene068669:intron | 45.0% | |
CATGTCAACAGATGGTGCAA+GGG | - | chr2.2:21314143-21314162 | MS.gene068669:intron | 45.0% | |
CGTAGTAATGCTTCGTTCTC+AGG | - | chr2.2:21313348-21313367 | MS.gene068669:intron | 45.0% | |
CTTCGTTCTCAGGATCGAAA+TGG | - | chr2.2:21313358-21313377 | MS.gene068669:intron | 45.0% | |
CTTTGAATCATCATGTGGCG+AGG | - | chr2.2:21314779-21314798 | MS.gene068669:intron | 45.0% | |
GCAAAGCGAAGAACTGAATG+CGG | + | chr2.2:21313979-21313998 | None:intergenic | 45.0% | |
GCATGTAAGTGACGTGAGAA+TGG | - | chr2.2:21311941-21311960 | MS.gene068669:intron | 45.0% | |
GCGTAACCTGTGAAATGGAA+AGG | + | chr2.2:21314884-21314903 | None:intergenic | 45.0% | |
GCTTGGATACTATCCAGTGA+GGG | - | chr2.2:21314191-21314210 | MS.gene068669:intron | 45.0% | |
GGAATGTAGGATTCACAGGA+AGG | + | chr2.2:21314239-21314258 | None:intergenic | 45.0% | |
GGGAGAAATTCCAGCAACAT+TGG | + | chr2.2:21312204-21312223 | None:intergenic | 45.0% | |
GTGTGGTCATCTGAGTTATG+AGG | - | chr2.2:21312397-21312416 | MS.gene068669:intron | 45.0% | |
GTTGAACGGAAGATCGCTAA+AGG | - | chr2.2:21311866-21311885 | MS.gene068669:intron | 45.0% | |
TAGGAGAGAAACCATGCATC+AGG | - | chr2.2:21311178-21311197 | MS.gene068669:intron | 45.0% | |
TCATGTCAACAGATGGTGCA+AGG | - | chr2.2:21314142-21314161 | MS.gene068669:intron | 45.0% | |
TGACGGCCATGATCATGATT+AGG | + | chr2.2:21310774-21310793 | None:intergenic | 45.0% | |
TGCTTGGATACTATCCAGTG+AGG | - | chr2.2:21314190-21314209 | MS.gene068669:intron | 45.0% | |
TTGTTACAGGGAGGTCATGA+AGG | - | chr2.2:21313181-21313200 | MS.gene068669:intron | 45.0% | |
! | AAACTGTAGCGGCATGCTTT+TGG | - | chr2.2:21315726-21315745 | MS.gene068669:CDS | 45.0% |
! | AACTGTAGCGGCATGCTTTT+GGG | - | chr2.2:21315727-21315746 | MS.gene068669:CDS | 45.0% |
! | ATTTTACCCAAGGGAGGAGA+AGG | - | chr2.2:21311844-21311863 | MS.gene068669:intron | 45.0% |
! | CTACAATGTGTTTTCCGCAG+TGG | - | chr2.2:21313245-21313264 | MS.gene068669:intron | 45.0% |
! | GCAGTGTTATCGATTGCAGA+TGG | + | chr2.2:21313106-21313125 | None:intergenic | 45.0% |
! | GGAAGGATAGCAGTTTTCGA+AGG | + | chr2.2:21314222-21314241 | None:intergenic | 45.0% |
! | GGATAGCAGTTTTCGAAGGA+AGG | + | chr2.2:21314218-21314237 | None:intergenic | 45.0% |
! | TGACTGTGTGCGCGTATTTT+GGG | + | chr2.2:21312913-21312932 | None:intergenic | 45.0% |
! | TGGAAGTTTTGCATCACCAG+AGG | - | chr2.2:21313141-21313160 | MS.gene068669:intron | 45.0% |
!! | CAATTCGAGTTGAATGCACC+TGG | + | chr2.2:21314926-21314945 | None:intergenic | 45.0% |
!! | GCAGCCTTATTCACCAATTG+TGG | - | chr2.2:21312076-21312095 | MS.gene068669:CDS | 45.0% |
!! | TTTTGGGAACTCAGCCTATC+AGG | - | chr2.2:21315743-21315762 | MS.gene068669:CDS | 45.0% |
!!! | CGTATTTTGGGATAGTCCGT+TGG | + | chr2.2:21312901-21312920 | None:intergenic | 45.0% |
!! | ATGTTATAATTATTTAAATA+TGG | + | chr2.2:21313905-21313924 | None:intergenic | 5.0% |
AAAGACTCCAGTGAGGCCAA+GGG | - | chr2.2:21315878-21315897 | MS.gene068669:CDS | 50.0% | |
ACATGCAGTCGGATGATGAG+CGG | - | chr2.2:21314405-21314424 | MS.gene068669:intron | 50.0% | |
AGGATCGCCATTACAGCTCA+TGG | + | chr2.2:21313402-21313421 | None:intergenic | 50.0% | |
ATCCAAGCACAGTACCACCA+AGG | + | chr2.2:21314179-21314198 | None:intergenic | 50.0% | |
ATGAGCGGGAAATGTGTACC+AGG | - | chr2.2:21314420-21314439 | MS.gene068669:intron | 50.0% | |
CAAGCGCGTAACCTGTGAAA+TGG | + | chr2.2:21314889-21314908 | None:intergenic | 50.0% | |
CAAGGGAGGAGAAGGTTGAA+CGG | - | chr2.2:21311852-21311871 | MS.gene068669:intron | 50.0% | |
CACGCTTCCATGAGCTGTAA+TGG | - | chr2.2:21313392-21313411 | MS.gene068669:intron | 50.0% | |
CACTTTCTGCCTGCTCAAGA+AGG | + | chr2.2:21315693-21315712 | None:intergenic | 50.0% | |
CGCAAGACCTATGCATTTCG+AGG | - | chr2.2:21315126-21315145 | MS.gene068669:intron | 50.0% | |
CTCGTCCTGTATCGCGTTAA+GGG | - | chr2.2:21315904-21315923 | MS.gene068669:CDS | 50.0% | |
GAAACTCACACACAACTGCG+AGG | + | chr2.2:21312592-21312611 | None:intergenic | 50.0% | |
GAATCCTACATTCCTCCCCA+GGG | - | chr2.2:21314245-21314264 | MS.gene068669:intron | 50.0% | |
GGAACTCAGCCTATCAGGTT+TGG | - | chr2.2:21315748-21315767 | MS.gene068669:CDS | 50.0% | |
GGGAGGAATGTAGGATTCAC+AGG | + | chr2.2:21314243-21314262 | None:intergenic | 50.0% | |
GTATTCCTCCCCTTCTAGTG+TGG | + | chr2.2:21313446-21313465 | None:intergenic | 50.0% | |
GTCCTTCAAAGACTCCAGTG+AGG | - | chr2.2:21315871-21315890 | MS.gene068669:CDS | 50.0% | |
GTTCAACCTTCTCCTCCCTT+GGG | + | chr2.2:21311853-21311872 | None:intergenic | 50.0% | |
TATGCTTGACACCGTCTCCA+GGG | - | chr2.2:21312553-21312572 | MS.gene068669:CDS | 50.0% | |
TGAATCCTACATTCCTCCCC+AGG | - | chr2.2:21314244-21314263 | MS.gene068669:intron | 50.0% | |
TTATGCTTGACACCGTCTCC+AGG | - | chr2.2:21312552-21312571 | MS.gene068669:CDS | 50.0% | |
TTTCACAGGTTACGCGCTTG+AGG | - | chr2.2:21314889-21314908 | MS.gene068669:intron | 50.0% | |
TTTGCACTGCCTTCTTGCAG+AGG | - | chr2.2:21311814-21311833 | MS.gene068669:intron | 50.0% | |
! | AACCTTGGTGGTACTGTGCT+TGG | - | chr2.2:21314174-21314193 | MS.gene068669:intron | 50.0% |
! | AGATTTTCGATGGGCCACTG+CGG | + | chr2.2:21313262-21313281 | None:intergenic | 50.0% |
! | GGGTTTGGGACAACAAATCC+AGG | + | chr2.2:21313287-21313306 | None:intergenic | 50.0% |
! | GTGACTGTGTGCGCGTATTT+TGG | + | chr2.2:21312914-21312933 | None:intergenic | 50.0% |
!! | AGGGCAGCTTTAAACCTTGG+TGG | - | chr2.2:21314162-21314181 | MS.gene068669:intron | 50.0% |
!! | GCAAGGGCAGCTTTAAACCT+TGG | - | chr2.2:21314159-21314178 | MS.gene068669:intron | 50.0% |
AATATCGGGGCGGAATGCGA+TGG | - | chr2.2:21312968-21312987 | MS.gene068669:intron | 55.0% | |
CAAAGACTCCAGTGAGGCCA+AGG | - | chr2.2:21315877-21315896 | MS.gene068669:CDS | 55.0% | |
CAAGTCCACACTAGAAGGGG+AGG | - | chr2.2:21313438-21313457 | MS.gene068669:intron | 55.0% | |
CATACCCTGGGGAGGAATGT+AGG | + | chr2.2:21314252-21314271 | None:intergenic | 55.0% | |
CATGCAGTCGGATGATGAGC+GGG | - | chr2.2:21314406-21314425 | MS.gene068669:intron | 55.0% | |
CGTTCAACCTTCTCCTCCCT+TGG | + | chr2.2:21311854-21311873 | None:intergenic | 55.0% | |
CTCCCCTTCTAGTGTGGACT+TGG | + | chr2.2:21313440-21313459 | None:intergenic | 55.0% | |
GATACAGGACGAGCAACCCT+TGG | + | chr2.2:21315897-21315916 | None:intergenic | 55.0% | |
GCTCGTCCTGTATCGCGTTA+AGG | - | chr2.2:21315903-21315922 | MS.gene068669:CDS | 55.0% | |
GGCCCATCGAAAATCTGACC+TGG | - | chr2.2:21313266-21313285 | MS.gene068669:intron | 55.0% | |
GGCCTCACTGGAGTCTTTGA+AGG | + | chr2.2:21315876-21315895 | None:intergenic | 55.0% | |
TTCGAAGGAAGGACCCTCAC+TGG | + | chr2.2:21314207-21314226 | None:intergenic | 55.0% | |
TTGGGATAGTCCGTTGGGTG+CGG | + | chr2.2:21312895-21312914 | None:intergenic | 55.0% | |
! | CAGCTCATGGAAGCGTGAGA+TGG | + | chr2.2:21313389-21313408 | None:intergenic | 55.0% |
!!! | GTGTGCGCCCACGTGTTTTT+TGG | + | chr2.2:21314072-21314091 | None:intergenic | 55.0% |
ACACACAACTGCGAGGTCCC+GGG | + | chr2.2:21312585-21312604 | None:intergenic | 60.0% | |
CACACACAACTGCGAGGTCC+CGG | + | chr2.2:21312586-21312605 | None:intergenic | 60.0% | |
TGGGATAGTCCGTTGGGTGC+GGG | + | chr2.2:21312894-21312913 | None:intergenic | 60.0% | |
ATCGGGGCGGAATGCGATGG+AGG | - | chr2.2:21312971-21312990 | MS.gene068669:intron | 65.0% | |
CCGGGTTCGAACCCTGGAGA+CGG | + | chr2.2:21312567-21312586 | None:intergenic | 65.0% | |
CCGTCTCCAGGGTTCGAACC+CGG | - | chr2.2:21312564-21312583 | MS.gene068669:CDS | 65.0% | |
CGAGCAACCCTTGGCCTCAC+TGG | + | chr2.2:21315888-21315907 | None:intergenic | 65.0% | |
CGTCTCCAGGGTTCGAACCC+GGG | - | chr2.2:21312565-21312584 | MS.gene068669:CDS | 65.0% | |
GATAGTCCGTTGGGTGCGGG+AGG | + | chr2.2:21312891-21312910 | None:intergenic | 65.0% | |
AGTCCGTTGGGTGCGGGAGG+AGG | + | chr2.2:21312888-21312907 | None:intergenic | 70.0% | |
GAGGTCCCGGGTTCGAACCC+TGG | + | chr2.2:21312573-21312592 | None:intergenic | 70.0% | |
GTCCGTTGGGTGCGGGAGGA+GGG | + | chr2.2:21312887-21312906 | None:intergenic | 70.0% | |
TGCCCTCCTCCCGCACCCAA+CGG | - | chr2.2:21312882-21312901 | MS.gene068669:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 21310618 | 21315923 | 21310618 | ID=MS.gene068669 |
chr2.2 | mRNA | 21310618 | 21315923 | 21310618 | ID=MS.gene068669.t1;Parent=MS.gene068669 |
chr2.2 | exon | 21315666 | 21315923 | 21315666 | ID=MS.gene068669.t1.exon1;Parent=MS.gene068669.t1 |
chr2.2 | CDS | 21315666 | 21315923 | 21315666 | ID=cds.MS.gene068669.t1;Parent=MS.gene068669.t1 |
chr2.2 | exon | 21314597 | 21314707 | 21314597 | ID=MS.gene068669.t1.exon2;Parent=MS.gene068669.t1 |
chr2.2 | CDS | 21314597 | 21314707 | 21314597 | ID=cds.MS.gene068669.t1;Parent=MS.gene068669.t1 |
chr2.2 | exon | 21314439 | 21314483 | 21314439 | ID=MS.gene068669.t1.exon3;Parent=MS.gene068669.t1 |
chr2.2 | CDS | 21314439 | 21314483 | 21314439 | ID=cds.MS.gene068669.t1;Parent=MS.gene068669.t1 |
chr2.2 | exon | 21312520 | 21312592 | 21312520 | ID=MS.gene068669.t1.exon4;Parent=MS.gene068669.t1 |
chr2.2 | CDS | 21312520 | 21312592 | 21312520 | ID=cds.MS.gene068669.t1;Parent=MS.gene068669.t1 |
chr2.2 | exon | 21312275 | 21312387 | 21312275 | ID=MS.gene068669.t1.exon5;Parent=MS.gene068669.t1 |
chr2.2 | CDS | 21312275 | 21312387 | 21312275 | ID=cds.MS.gene068669.t1;Parent=MS.gene068669.t1 |
chr2.2 | exon | 21312069 | 21312128 | 21312069 | ID=MS.gene068669.t1.exon6;Parent=MS.gene068669.t1 |
chr2.2 | CDS | 21312069 | 21312128 | 21312069 | ID=cds.MS.gene068669.t1;Parent=MS.gene068669.t1 |
chr2.2 | exon | 21311741 | 21311788 | 21311741 | ID=MS.gene068669.t1.exon7;Parent=MS.gene068669.t1 |
chr2.2 | CDS | 21311741 | 21311788 | 21311741 | ID=cds.MS.gene068669.t1;Parent=MS.gene068669.t1 |
chr2.2 | exon | 21311576 | 21311644 | 21311576 | ID=MS.gene068669.t1.exon8;Parent=MS.gene068669.t1 |
chr2.2 | CDS | 21311576 | 21311644 | 21311576 | ID=cds.MS.gene068669.t1;Parent=MS.gene068669.t1 |
chr2.2 | exon | 21310777 | 21310838 | 21310777 | ID=MS.gene068669.t1.exon9;Parent=MS.gene068669.t1 |
chr2.2 | CDS | 21310777 | 21310838 | 21310777 | ID=cds.MS.gene068669.t1;Parent=MS.gene068669.t1 |
chr2.2 | exon | 21310618 | 21310675 | 21310618 | ID=MS.gene068669.t1.exon10;Parent=MS.gene068669.t1 |
chr2.2 | CDS | 21310618 | 21310675 | 21310618 | ID=cds.MS.gene068669.t1;Parent=MS.gene068669.t1 |
Gene Sequence |
Protein sequence |