Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06870.t1 | XP_003602305.1 | 99.3 | 459 | 3 | 0 | 1 | 459 | 1 | 459 | 1.20E-254 | 888.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06870.t1 | Q6N075 | 36.6 | 429 | 249 | 10 | 6 | 426 | 6 | 419 | 1.3e-63 | 245.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06870.t1 | G7J858 | 99.3 | 459 | 3 | 0 | 1 | 459 | 1 | 459 | 8.6e-255 | 888.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050894 | MS.gene06870 | 0.810437 | 1.15E-50 | -1.69E-46 |
| MS.gene052289 | MS.gene06870 | 0.807246 | 5.55E-50 | -1.69E-46 |
| MS.gene057195 | MS.gene06870 | 0.996329 | 3.74E-226 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06870.t1 | MTR_3g092030 | 99.346 | 459 | 3 | 0 | 1 | 459 | 1 | 459 | 0.0 | 930 |
| MS.gene06870.t1 | MTR_3g092030 | 99.263 | 407 | 3 | 0 | 1 | 407 | 1 | 407 | 0.0 | 819 |
| MS.gene06870.t1 | MTR_3g092030 | 99.401 | 334 | 2 | 0 | 1 | 334 | 1 | 334 | 0.0 | 668 |
| MS.gene06870.t1 | MTR_5g016080 | 27.078 | 373 | 240 | 7 | 32 | 397 | 47 | 394 | 2.06e-32 | 128 |
| MS.gene06870.t1 | MTR_5g016080 | 26.629 | 353 | 227 | 7 | 32 | 377 | 47 | 374 | 7.04e-28 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06870.t1 | AT4G27720 | 85.000 | 460 | 68 | 1 | 1 | 459 | 1 | 460 | 0.0 | 818 |
| MS.gene06870.t1 | AT3G49310 | 81.739 | 460 | 83 | 1 | 1 | 459 | 1 | 460 | 0.0 | 793 |
| MS.gene06870.t1 | AT1G64650 | 81.345 | 461 | 83 | 2 | 1 | 458 | 1 | 461 | 0.0 | 790 |
| MS.gene06870.t1 | AT1G64650 | 81.068 | 412 | 75 | 2 | 50 | 458 | 9 | 420 | 0.0 | 704 |
| MS.gene06870.t1 | AT2G23093 | 25.517 | 435 | 273 | 13 | 30 | 446 | 46 | 447 | 4.02e-21 | 95.9 |
| MS.gene06870.t1 | AT2G23093 | 25.250 | 400 | 248 | 13 | 65 | 446 | 14 | 380 | 3.71e-19 | 89.4 |
Find 99 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCGCAGCACCCCTAAAT+TGG | 0.113644 | 3.1:+74060833 | None:intergenic |
| CGCCGGGTGCATTCAGCTTT+TGG | 0.118395 | 3.1:-74060115 | MS.gene06870:CDS |
| CAACTCTTCATTGCTGGATT+TGG | 0.156725 | 3.1:-74062423 | MS.gene06870:CDS |
| TTCTCGAAGGCTATATTTCT+TGG | 0.216269 | 3.1:-74061036 | MS.gene06870:CDS |
| AGAGCTTGCTTGCCCAATTT+AGG | 0.224575 | 3.1:-74060846 | MS.gene06870:CDS |
| AACTCTTCATTGCTGGATTT+GGG | 0.263781 | 3.1:-74062422 | MS.gene06870:CDS |
| CTTGATGTTGGGCCGTATCT+TGG | 0.280247 | 3.1:-74062180 | MS.gene06870:CDS |
| AAAGTTGTGTTGGCATATTC+TGG | 0.280683 | 3.1:-74060077 | MS.gene06870:CDS |
| TCCAAACAGCCCAGAAAATA+TGG | 0.295391 | 3.1:+74060999 | None:intergenic |
| GAGCTTGCTTGCCCAATTTA+GGG | 0.300525 | 3.1:-74060845 | MS.gene06870:CDS |
| TTCCCTATCACTGTTATGTT+TGG | 0.303539 | 3.1:-74059601 | MS.gene06870:CDS |
| GCTGCGGTGGCCATTGCTTC+TGG | 0.308302 | 3.1:-74060820 | MS.gene06870:intron |
| CTATACAGTACGTATGGATA+TGG | 0.330750 | 3.1:-74062462 | MS.gene06870:CDS |
| CCACCACCTGTTGCTTTAGT+AGG | 0.348043 | 3.1:+74060147 | None:intergenic |
| TTTGGGTCTTCGATGTTATT+CGG | 0.354101 | 3.1:-74062405 | MS.gene06870:CDS |
| ATGCCAAACATAACAGTGAT+AGG | 0.360971 | 3.1:+74059598 | None:intergenic |
| CTTGTTGATACATTGGCTCT+TGG | 0.361460 | 3.1:-74060970 | MS.gene06870:CDS |
| ATCGGACAACTCTTCATTGC+TGG | 0.362820 | 3.1:-74062429 | MS.gene06870:CDS |
| AAGGCTATATTTCTTGGAAA+TGG | 0.366820 | 3.1:-74061030 | MS.gene06870:CDS |
| CTCGCTTGCATCTAAGTTGA+TGG | 0.381655 | 3.1:-74060367 | MS.gene06870:CDS |
| TTGAGATCTCATCTTCATAA+TGG | 0.384178 | 3.1:+74060050 | None:intergenic |
| CTCATTTATTCTCTCATGAT+GGG | 0.397970 | 3.1:-74063250 | MS.gene06870:intron |
| TCTCATTTATTCTCTCATGA+TGG | 0.399753 | 3.1:-74063251 | MS.gene06870:CDS |
| AAAGTTCATGATGGTGCTCC+TGG | 0.400456 | 3.1:+74060011 | None:intergenic |
| AAGTCACACAAGCTCTCTTC+CGG | 0.400505 | 3.1:+74062258 | None:intergenic |
| CACCGCAGCACCCCTAAATT+GGG | 0.400707 | 3.1:+74060834 | None:intergenic |
| GCCATACAGTCTCTCTTTGA+AGG | 0.407686 | 3.1:-74060501 | MS.gene06870:CDS |
| ATTCATGTTATCTTCAATGT+TGG | 0.410052 | 3.1:-74060394 | MS.gene06870:CDS |
| TGTATACCTTTGTGTTCCTA+TGG | 0.414069 | 3.1:-74060473 | MS.gene06870:CDS |
| ATGTTATTCGGAACAATTGT+GGG | 0.415436 | 3.1:-74062393 | MS.gene06870:CDS |
| TTGTTCTTCTACCTTGTCTT+CGG | 0.421408 | 3.1:-74063373 | MS.gene06870:CDS |
| TTCATGTTATCTTCAATGTT+GGG | 0.421818 | 3.1:-74060393 | MS.gene06870:CDS |
| GCAGTTCCTACTAAAGCAAC+AGG | 0.424570 | 3.1:-74060153 | MS.gene06870:CDS |
| TTAATCAATTACAGATTCAA+TGG | 0.425661 | 3.1:+74058960 | None:intergenic |
| CATATCCATACGTACTGTAT+AGG | 0.434125 | 3.1:+74062463 | None:intergenic |
| TGAAAACAGAAACAGAAGAT+TGG | 0.434785 | 3.1:-74059013 | MS.gene06870:intron |
| GAGAAGATAATTGTTCTTGA+AGG | 0.443920 | 3.1:+74063270 | None:intergenic |
| TCTACATGGACAGAAAACTA+TGG | 0.449195 | 3.1:-74060886 | MS.gene06870:CDS |
| AAACCTGCAGCAGCGTCAAA+GGG | 0.457365 | 3.1:+74060937 | None:intergenic |
| ATGGTGCTCCTGGCTTCCTC+AGG | 0.461583 | 3.1:+74060021 | None:intergenic |
| AGTACGTATGGATATGGAAA+AGG | 0.464152 | 3.1:-74062456 | MS.gene06870:CDS |
| GTATGGCTATAGCTGGTGAT+TGG | 0.466459 | 3.1:-74062509 | MS.gene06870:intron |
| CTGTATAGGTAGTAAACATA+TGG | 0.466801 | 3.1:+74062477 | None:intergenic |
| TCATCATTTGGGCTTAATGC+AGG | 0.467424 | 3.1:+74060447 | None:intergenic |
| GTACGTATGGATATGGAAAA+GGG | 0.469222 | 3.1:-74062455 | MS.gene06870:CDS |
| GGTGATGCAGCTTGCAATGT+AGG | 0.472241 | 3.1:+74062226 | None:intergenic |
| TTGATGTTGGGCCGTATCTT+GGG | 0.472991 | 3.1:-74062179 | MS.gene06870:CDS |
| TTCTTCTACCTTGTCTTCGG+TGG | 0.475762 | 3.1:-74063370 | MS.gene06870:CDS |
| GCTAGTTGCTGAGCATTTCA+AGG | 0.477810 | 3.1:-74062114 | MS.gene06870:intron |
| AAAACCTGCAGCAGCGTCAA+AGG | 0.480550 | 3.1:+74060936 | None:intergenic |
| CAATACAGAGTCTTGATGTT+GGG | 0.480967 | 3.1:-74062191 | MS.gene06870:CDS |
| GGTGGTGGTCTCTCATTCGC+CGG | 0.485040 | 3.1:-74060132 | MS.gene06870:CDS |
| CCAATTTAGGGGTGCTGCGG+TGG | 0.489380 | 3.1:-74060833 | MS.gene06870:CDS |
| ATAGCATACAGTGGTAAGAA+TGG | 0.492139 | 3.1:+74060272 | None:intergenic |
| AATACATTCCTGAGGAAGCC+AGG | 0.496275 | 3.1:-74060029 | MS.gene06870:CDS |
| TAGCATACAGTGGTAAGAAT+GGG | 0.504293 | 3.1:+74060273 | None:intergenic |
| AAGGCGACTGCTCGTGATTG+CGG | 0.515226 | 3.1:-74059539 | MS.gene06870:CDS |
| ACCTTCAAAGAGAGACTGTA+TGG | 0.515882 | 3.1:+74060500 | None:intergenic |
| GTGGTGGTCTCTCATTCGCC+GGG | 0.524709 | 3.1:-74060131 | MS.gene06870:CDS |
| TCAATACAGAGTCTTGATGT+TGG | 0.527647 | 3.1:-74062192 | MS.gene06870:CDS |
| AAATGTCCTTGTTGATACAT+TGG | 0.532054 | 3.1:-74060977 | MS.gene06870:CDS |
| TACATTGGCTCTTGGACCAG+TGG | 0.533547 | 3.1:-74060962 | MS.gene06870:CDS |
| ATAGCTGGTGATTGGTTACA+AGG | 0.536193 | 3.1:-74062501 | MS.gene06870:intron |
| ACCCAAAAGCTGAATGCACC+CGG | 0.540450 | 3.1:+74060113 | None:intergenic |
| AACAGAAGATTGGCAACTCA+AGG | 0.548096 | 3.1:-74059003 | MS.gene06870:CDS |
| CCTACTAAAGCAACAGGTGG+TGG | 0.548441 | 3.1:-74060147 | MS.gene06870:CDS |
| TGGCAATGCCACCCAAGATA+CGG | 0.550294 | 3.1:+74062168 | None:intergenic |
| TACTACCTATACAGTACGTA+TGG | 0.551044 | 3.1:-74062468 | MS.gene06870:CDS |
| AGATTGGCAACTCAAGGAAA+GGG | 0.555844 | 3.1:-74058997 | MS.gene06870:CDS |
| GGATATGGAAAAGGGGAGAT+CGG | 0.557120 | 3.1:-74062447 | MS.gene06870:CDS |
| GGCTTAATGCAGGAGTCCAT+AGG | 0.558342 | 3.1:+74060457 | None:intergenic |
| AAGATTGGCAACTCAAGGAA+AGG | 0.560058 | 3.1:-74058998 | MS.gene06870:CDS |
| CAGATTCAATGGCTCTGACT+CGG | 0.562995 | 3.1:+74058971 | None:intergenic |
| TGATCGTGATATTATCTACA+TGG | 0.566672 | 3.1:-74060900 | MS.gene06870:CDS |
| GATCTCATCTTCATAATGGA+TGG | 0.570928 | 3.1:+74060054 | None:intergenic |
| TGCCAAACATAACAGTGATA+GGG | 0.571327 | 3.1:+74059599 | None:intergenic |
| GTAAGATACTAGCCATGAAG+AGG | 0.572565 | 3.1:+74059563 | None:intergenic |
| TGCCGAAAATAGAAGTGAAG+TGG | 0.574265 | 3.1:+74062148 | None:intergenic |
| GATGTTATTCGGAACAATTG+TGG | 0.575416 | 3.1:-74062394 | MS.gene06870:CDS |
| CGGCTAATCCACCGAAGACA+AGG | 0.577466 | 3.1:+74063362 | None:intergenic |
| AACATCAAGACTCTGTATTG+AGG | 0.584283 | 3.1:+74062194 | None:intergenic |
| AGCTTGCTTGCCCAATTTAG+GGG | 0.587066 | 3.1:-74060844 | MS.gene06870:CDS |
| ACCTGCAGCAGCGTCAAAGG+GGG | 0.590199 | 3.1:+74060939 | None:intergenic |
| AAGAACTATACCAGAAGCAA+TGG | 0.596618 | 3.1:+74060810 | None:intergenic |
| TCTGTATTGAGGAGAATGCT+TGG | 0.601257 | 3.1:+74062205 | None:intergenic |
| GCTATCATTAACATTCTCGA+AGG | 0.610234 | 3.1:-74061049 | MS.gene06870:CDS |
| AGAGGGGCTTTGATCAGCAA+TGG | 0.613910 | 3.1:-74061071 | MS.gene06870:CDS |
| TGCCCAATTTAGGGGTGCTG+CGG | 0.615185 | 3.1:-74060836 | MS.gene06870:CDS |
| AACCTGCAGCAGCGTCAAAG+GGG | 0.643247 | 3.1:+74060938 | None:intergenic |
| GGCTCGTTCATCATTCCGTG+TGG | 0.650417 | 3.1:-74060346 | MS.gene06870:CDS |
| TACGTATGGATATGGAAAAG+GGG | 0.653213 | 3.1:-74062454 | MS.gene06870:CDS |
| CAAGAGCCAATGTATCAACA+AGG | 0.662983 | 3.1:+74060971 | None:intergenic |
| ATGTTGGGCCGTATCTTGGG+TGG | 0.669526 | 3.1:-74062176 | MS.gene06870:CDS |
| TCATGGCTAGTATCTTACAA+AGG | 0.673331 | 3.1:-74059558 | MS.gene06870:CDS |
| CTCGAGAACAGCAACAACAG+CGG | 0.691907 | 3.1:+74063342 | None:intergenic |
| GAGATCTCAATACATTCCTG+AGG | 0.692563 | 3.1:-74060037 | MS.gene06870:CDS |
| GTTCCTACTAAAGCAACAGG+TGG | 0.707303 | 3.1:-74060150 | MS.gene06870:CDS |
| AGGAGTCCATAGGAACACAA+AGG | 0.732126 | 3.1:+74060467 | None:intergenic |
| TCTGCATGTAGCTCTCCACA+CGG | 0.735568 | 3.1:+74060331 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATGATTAACATATTTAA+AGG | + | chr3.1:74060369-74060388 | None:intergenic | 10.0% |
| !!! | TTTTTGTTTTATATGAAAAT+GGG | + | chr3.1:74063278-74063297 | None:intergenic | 10.0% |
| !!! | TTTTTTGTTTTATATGAAAA+TGG | + | chr3.1:74063279-74063298 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTGAAATTGAATT+TGG | - | chr3.1:74059298-74059317 | MS.gene06870:intron | 10.0% |
| !! | AAATTTAGTAACTATTAACT+AGG | - | chr3.1:74060664-74060683 | MS.gene06870:intron | 15.0% |
| !! | AATATGTTAATCATATATGA+AGG | - | chr3.1:74060372-74060391 | MS.gene06870:CDS | 15.0% |
| !! | ACTATTATATAAGACATTTA+CGG | + | chr3.1:74060398-74060417 | None:intergenic | 15.0% |
| !! | ATCAAATCAACTATATTTAA+AGG | + | chr3.1:74059658-74059677 | None:intergenic | 15.0% |
| !! | TAAAAAATGATAACAGAATA+AGG | + | chr3.1:74061727-74061746 | None:intergenic | 15.0% |
| !! | TATTCAAATTTGAATAATGT+TGG | - | chr3.1:74059587-74059606 | MS.gene06870:CDS | 15.0% |
| !!! | TTGTTTATTTTTTTATGTAC+AGG | - | chr3.1:74062715-74062734 | MS.gene06870:intron | 15.0% |
| !! | AAAACAAAAAAGAAAGTTCT+TGG | - | chr3.1:74063288-74063307 | MS.gene06870:CDS | 20.0% |
| !! | AAATTTGAATAATGTTGGAT+GGG | - | chr3.1:74059592-74059611 | MS.gene06870:CDS | 20.0% |
| !! | AAGAAATAATAAACAGAAGA+TGG | + | chr3.1:74059217-74059236 | None:intergenic | 20.0% |
| !! | AAGTACAAAATGTAAAATGA+AGG | + | chr3.1:74061224-74061243 | None:intergenic | 20.0% |
| !! | AATTAGTGCAATATAAAAGT+TGG | + | chr3.1:74062505-74062524 | None:intergenic | 20.0% |
| !! | ATTACTATGAATTTGAACTT+TGG | - | chr3.1:74061597-74061616 | MS.gene06870:intron | 20.0% |
| !! | GTTTGTAAAGAAAATGTATT+TGG | + | chr3.1:74063248-74063267 | None:intergenic | 20.0% |
| !! | TATGATAAATTTATAAACCC+CGG | + | chr3.1:74061068-74061087 | None:intergenic | 20.0% |
| !! | TTATGTAAATATCAACTATG+TGG | - | chr3.1:74060708-74060727 | MS.gene06870:intron | 20.0% |
| !! | TTCATTTAACGAAACAATTA+AGG | - | chr3.1:74060852-74060871 | MS.gene06870:CDS | 20.0% |
| !!! | ACAACTACAAATTTTGAAAA+TGG | - | chr3.1:74060599-74060618 | MS.gene06870:intron | 20.0% |
| !!! | CTTTATTATCAAGTTTTATC+TGG | - | chr3.1:74060290-74060309 | MS.gene06870:CDS | 20.0% |
| !!! | TTAGTTTTAGTGATCTTAAT+AGG | - | chr3.1:74059805-74059824 | MS.gene06870:intron | 20.0% |
| !!! | TTTTATGATTTTCTTAGCTT+TGG | - | chr3.1:74059389-74059408 | MS.gene06870:intron | 20.0% |
| ! | AACAATGACAAAACTATCTA+AGG | + | chr3.1:74061564-74061583 | None:intergenic | 25.0% |
| ! | ACTTCTCAATATGAAAATCA+GGG | - | chr3.1:74060065-74060084 | MS.gene06870:CDS | 25.0% |
| ! | ATGTTGCAAAAATAAAACCA+TGG | + | chr3.1:74061935-74061954 | None:intergenic | 25.0% |
| ! | ATTCATGTTATCTTCAATGT+TGG | - | chr3.1:74061953-74061972 | MS.gene06870:intron | 25.0% |
| ! | CAAATTTGAATAATGTTGGA+TGG | - | chr3.1:74059591-74059610 | MS.gene06870:CDS | 25.0% |
| ! | TAAGGGTAAAAATTGTATTG+TGG | + | chr3.1:74061160-74061179 | None:intergenic | 25.0% |
| ! | TCCCGGAAAAAATAAAATAA+TGG | + | chr3.1:74061666-74061685 | None:intergenic | 25.0% |
| ! | TGAAAACGATGTAATTGAAA+TGG | - | chr3.1:74059323-74059342 | MS.gene06870:intron | 25.0% |
| ! | TGTTGCAAAAATAAAACCAT+GGG | + | chr3.1:74061934-74061953 | None:intergenic | 25.0% |
| ! | TTCATGTTATCTTCAATGTT+GGG | - | chr3.1:74061954-74061973 | MS.gene06870:intron | 25.0% |
| ! | TTGCAAAAAGCAAAAGATAT+AGG | - | chr3.1:74062611-74062630 | MS.gene06870:intron | 25.0% |
| !! | ATAATTTGACTTTGTTACTG+TGG | - | chr3.1:74062160-74062179 | MS.gene06870:CDS | 25.0% |
| !! | ATTTTACAATATCTTCCAAG+TGG | - | chr3.1:74061112-74061131 | MS.gene06870:intron | 25.0% |
| !! | TGGTTTTCATATCCAATTTA+GGG | - | chr3.1:74060930-74060949 | MS.gene06870:CDS | 25.0% |
| !! | TTTTGTCATTGTTTATACAG+TGG | - | chr3.1:74061571-74061590 | MS.gene06870:intron | 25.0% |
| !!! | ATAGTAGTGATGTGTTTTTT+TGG | - | chr3.1:74059421-74059440 | MS.gene06870:intron | 25.0% |
| !!! | ATATCTTCATTGCTTGTTTT+TGG | - | chr3.1:74060910-74060929 | MS.gene06870:CDS | 25.0% |
| !!! | GCCATTATTTTATTTTTTCC+GGG | - | chr3.1:74061662-74061681 | MS.gene06870:intron | 25.0% |
| !!! | GGCCATTATTTTATTTTTTC+CGG | - | chr3.1:74061661-74061680 | MS.gene06870:intron | 25.0% |
| !!! | TAATAGGTTTCGTTTTTGTA+TGG | - | chr3.1:74059821-74059840 | MS.gene06870:intron | 25.0% |
| !!! | TACTCTTTTTCTTTGCTTTT+TGG | - | chr3.1:74059464-74059483 | MS.gene06870:intron | 25.0% |
| !!! | TCAAAAGCATTATATCTAAG+CGG | + | chr3.1:74062424-74062443 | None:intergenic | 25.0% |
| !!! | TTGGTTTTCATATCCAATTT+AGG | - | chr3.1:74060929-74060948 | MS.gene06870:CDS | 25.0% |
| !!! | TTTGAAAATGGTTTTAGATG+TGG | - | chr3.1:74060611-74060630 | MS.gene06870:intron | 25.0% |
| AAAATGCTACGACATATGTA+TGG | + | chr3.1:74060033-74060052 | None:intergenic | 30.0% | |
| AAAGCAGAAGAAACAACTAA+TGG | + | chr3.1:74060957-74060976 | None:intergenic | 30.0% | |
| AAATGTCCTTGTTGATACAT+TGG | - | chr3.1:74061370-74061389 | MS.gene06870:intron | 30.0% | |
| AAGAAAGGGTTTATAATTCC+AGG | + | chr3.1:74062532-74062551 | None:intergenic | 30.0% | |
| AAGGCTATATTTCTTGGAAA+TGG | - | chr3.1:74061317-74061336 | MS.gene06870:intron | 30.0% | |
| AATTCATGAACATCTGTACT+AGG | + | chr3.1:74061778-74061797 | None:intergenic | 30.0% | |
| AGATGTGGATCATTATGTTT+AGG | - | chr3.1:74060626-74060645 | MS.gene06870:intron | 30.0% | |
| ATATTGCACTAATTTGAACC+TGG | - | chr3.1:74062511-74062530 | MS.gene06870:intron | 30.0% | |
| ATGTAAATCACAGTACCAAT+GGG | + | chr3.1:74062124-74062143 | None:intergenic | 30.0% | |
| ATGTTATTCGGAACAATTGT+GGG | - | chr3.1:74059954-74059973 | MS.gene06870:intron | 30.0% | |
| CAGACATCGTATTTAAGAAA+GGG | + | chr3.1:74062546-74062565 | None:intergenic | 30.0% | |
| CTCATTTATTCTCTCATGAT+GGG | - | chr3.1:74059097-74059116 | MS.gene06870:intron | 30.0% | |
| CTGTATAGGTAGTAAACATA+TGG | + | chr3.1:74059873-74059892 | None:intergenic | 30.0% | |
| CTTCTCAATATGAAAATCAG+GGG | - | chr3.1:74060066-74060085 | MS.gene06870:CDS | 30.0% | |
| CTTTCTTAAATACGATGTCT+GGG | - | chr3.1:74062545-74062564 | MS.gene06870:intron | 30.0% | |
| GACTTCTCAATATGAAAATC+AGG | - | chr3.1:74060064-74060083 | MS.gene06870:CDS | 30.0% | |
| GAGAAGATAATTGTTCTTGA+AGG | + | chr3.1:74059080-74059099 | None:intergenic | 30.0% | |
| GAGTAAAAATCACAACTTCA+AGG | + | chr3.1:74059449-74059468 | None:intergenic | 30.0% | |
| GTAGAATTCAACAAGATAAC+TGG | + | chr3.1:74062575-74062594 | None:intergenic | 30.0% | |
| GTTGATATGCCAGATAATAT+AGG | + | chr3.1:74063186-74063205 | None:intergenic | 30.0% | |
| GTTGCAAAAATAAAACCATG+GGG | + | chr3.1:74061933-74061952 | None:intergenic | 30.0% | |
| TACCCTTAAAATCTGACAAA+GGG | - | chr3.1:74061172-74061191 | MS.gene06870:intron | 30.0% | |
| TAGTTATTATAAGTACCACG+AGG | - | chr3.1:74060417-74060436 | MS.gene06870:CDS | 30.0% | |
| TATGATTACTTTATACACGC+AGG | - | chr3.1:74060314-74060333 | MS.gene06870:CDS | 30.0% | |
| TCTCATTTATTCTCTCATGA+TGG | - | chr3.1:74059096-74059115 | MS.gene06870:intron | 30.0% | |
| TGAAAACAGAAACAGAAGAT+TGG | - | chr3.1:74063334-74063353 | MS.gene06870:CDS | 30.0% | |
| TGATCGTGATATTATCTACA+TGG | - | chr3.1:74061447-74061466 | MS.gene06870:intron | 30.0% | |
| TTACCCTTAAAATCTGACAA+AGG | - | chr3.1:74061171-74061190 | MS.gene06870:intron | 30.0% | |
| TTGAGATCTCATCTTCATAA+TGG | + | chr3.1:74062300-74062319 | None:intergenic | 30.0% | |
| TTGCAAAAATAAAACCATGG+GGG | + | chr3.1:74061932-74061951 | None:intergenic | 30.0% | |
| ! | AAACCCTTTGTCAGATTTTA+AGG | + | chr3.1:74061178-74061197 | None:intergenic | 30.0% |
| ! | AACCCTTTGTCAGATTTTAA+GGG | + | chr3.1:74061177-74061196 | None:intergenic | 30.0% |
| ! | GATGAAAAAATAGCTTTGCT+TGG | - | chr3.1:74061822-74061841 | MS.gene06870:intron | 30.0% |
| ! | GCATGTTTATCTTGTTTAGA+GGG | + | chr3.1:74061092-74061111 | None:intergenic | 30.0% |
| ! | TAGATTGTTTAAGATCAAGC+TGG | + | chr3.1:74062481-74062500 | None:intergenic | 30.0% |
| ! | TGCATGTTTATCTTGTTTAG+AGG | + | chr3.1:74061093-74061112 | None:intergenic | 30.0% |
| !! | AATAAGTTTTGATCCCATTG+CGG | + | chr3.1:74062887-74062906 | None:intergenic | 30.0% |
| !! | TGTACTTTTGAAAGTTGTGT+TGG | - | chr3.1:74062260-74062279 | MS.gene06870:CDS | 30.0% |
| !! | TTCCAAAAGATGTTGATTTC+CGG | - | chr3.1:74061046-74061065 | MS.gene06870:CDS | 30.0% |
| !!! | CTTTTGCTTTTTGCAAGAAA+GGG | + | chr3.1:74062607-74062626 | None:intergenic | 30.0% |
| !!! | TCTTTTGCTTTTTGCAAGAA+AGG | + | chr3.1:74062608-74062627 | None:intergenic | 30.0% |
| !!! | TTTTGCTTTTTGCAAGAAAG+GGG | + | chr3.1:74062606-74062625 | None:intergenic | 30.0% |
| AAATGAAGGAATCAAGACGA+AGG | + | chr3.1:74061210-74061229 | None:intergenic | 35.0% | |
| AACATCAAGACTCTGTATTG+AGG | + | chr3.1:74060156-74060175 | None:intergenic | 35.0% | |
| AACTCTTCATTGCTGGATTT+GGG | - | chr3.1:74059925-74059944 | MS.gene06870:intron | 35.0% | |
| AAGAACTATACCAGAAGCAA+TGG | + | chr3.1:74061540-74061559 | None:intergenic | 35.0% | |
| AAGCATTATATCTAAGCGGT+AGG | + | chr3.1:74062420-74062439 | None:intergenic | 35.0% | |
| AATGCGGAAAAAGTTCATGA+TGG | + | chr3.1:74062348-74062367 | None:intergenic | 35.0% | |
| ACAAACACACTAGTTGCTAT+CGG | - | chr3.1:74060795-74060814 | MS.gene06870:intron | 35.0% | |
| ACACACACAAAAATGTTCAG+AGG | + | chr3.1:74062371-74062390 | None:intergenic | 35.0% | |
| ACTAAATTTATGCAACACGC+AGG | + | chr3.1:74060653-74060672 | None:intergenic | 35.0% | |
| AGGCAGGATATATAACACAA+GGG | + | chr3.1:74063015-74063034 | None:intergenic | 35.0% | |
| AGTACGTATGGATATGGAAA+AGG | - | chr3.1:74059891-74059910 | MS.gene06870:intron | 35.0% | |
| ATAGCATACAGTGGTAAGAA+TGG | + | chr3.1:74062078-74062097 | None:intergenic | 35.0% | |
| ATATCAACTATGTGGTGTAG+TGG | - | chr3.1:74060716-74060735 | MS.gene06870:intron | 35.0% | |
| ATATGCCAGATAATATAGGC+AGG | + | chr3.1:74063182-74063201 | None:intergenic | 35.0% | |
| ATGCCAAACATAACAGTGAT+AGG | + | chr3.1:74062752-74062771 | None:intergenic | 35.0% | |
| ATGTTGAATTTGTACCGCAA+TGG | - | chr3.1:74062870-74062889 | MS.gene06870:intron | 35.0% | |
| ATTGCCCACTTTGGTTAATT+GGG | - | chr3.1:74063096-74063115 | MS.gene06870:intron | 35.0% | |
| ATTGGAAGAATAGCATACAG+TGG | + | chr3.1:74062087-74062106 | None:intergenic | 35.0% | |
| ATTTCAACATACATCACTCC+CGG | + | chr3.1:74061683-74061702 | None:intergenic | 35.0% | |
| CAAAAATGTTCAGAGGAATG+CGG | + | chr3.1:74062364-74062383 | None:intergenic | 35.0% | |
| CAATACAGAGTCTTGATGTT+GGG | - | chr3.1:74060156-74060175 | MS.gene06870:CDS | 35.0% | |
| CATATCCATACGTACTGTAT+AGG | + | chr3.1:74059887-74059906 | None:intergenic | 35.0% | |
| CATTAATCTACCTAACGAGT+GGG | - | chr3.1:74061636-74061655 | MS.gene06870:intron | 35.0% | |
| CCAGACATCGTATTTAAGAA+AGG | + | chr3.1:74062547-74062566 | None:intergenic | 35.0% | |
| CCTTTCTTAAATACGATGTC+TGG | - | chr3.1:74062544-74062563 | MS.gene06870:intron | 35.0% | |
| CTATACAGTACGTATGGATA+TGG | - | chr3.1:74059885-74059904 | MS.gene06870:intron | 35.0% | |
| GATCTACCAAAAATAGCTTG+AGG | + | chr3.1:74063035-74063054 | None:intergenic | 35.0% | |
| GATGTAAATCACAGTACCAA+TGG | + | chr3.1:74062125-74062144 | None:intergenic | 35.0% | |
| GATGTTATTCGGAACAATTG+TGG | - | chr3.1:74059953-74059972 | MS.gene06870:intron | 35.0% | |
| GCCTTTAAGTAAAAGTCCAT+GGG | - | chr3.1:74063131-74063150 | MS.gene06870:intron | 35.0% | |
| GCTATCATTAACATTCTCGA+AGG | - | chr3.1:74061298-74061317 | MS.gene06870:intron | 35.0% | |
| GTACGTATGGATATGGAAAA+GGG | - | chr3.1:74059892-74059911 | MS.gene06870:intron | 35.0% | |
| GTGAGCAAAAATCACTTTGT+TGG | + | chr3.1:74061138-74061157 | None:intergenic | 35.0% | |
| TAACGAAACAATTAAGGCAG+AGG | - | chr3.1:74060858-74060877 | MS.gene06870:CDS | 35.0% | |
| TACGTATGGATATGGAAAAG+GGG | - | chr3.1:74059893-74059912 | MS.gene06870:intron | 35.0% | |
| TACTACCTATACAGTACGTA+TGG | - | chr3.1:74059879-74059898 | MS.gene06870:intron | 35.0% | |
| TAGCATACAGTGGTAAGAAT+GGG | + | chr3.1:74062077-74062096 | None:intergenic | 35.0% | |
| TATACACTACACAAAGCCAA+AGG | + | chr3.1:74062990-74063009 | None:intergenic | 35.0% | |
| TATGCCAGATAATATAGGCA+GGG | + | chr3.1:74063181-74063200 | None:intergenic | 35.0% | |
| TCAATACAGAGTCTTGATGT+TGG | - | chr3.1:74060155-74060174 | MS.gene06870:CDS | 35.0% | |
| TCATGGCTAGTATCTTACAA+AGG | - | chr3.1:74062789-74062808 | MS.gene06870:intron | 35.0% | |
| TCTACATGGACAGAAAACTA+TGG | - | chr3.1:74061461-74061480 | MS.gene06870:intron | 35.0% | |
| TGCCAAACATAACAGTGATA+GGG | + | chr3.1:74062751-74062770 | None:intergenic | 35.0% | |
| TGCCTTTAAGTAAAAGTCCA+TGG | - | chr3.1:74063130-74063149 | MS.gene06870:intron | 35.0% | |
| TGTATACCTTTGTGTTCCTA+TGG | - | chr3.1:74061874-74061893 | MS.gene06870:intron | 35.0% | |
| TGTTGAATTTGTACCGCAAT+GGG | - | chr3.1:74062871-74062890 | MS.gene06870:intron | 35.0% | |
| TTATCTGGCATATCAACACA+TGG | - | chr3.1:74063189-74063208 | MS.gene06870:intron | 35.0% | |
| TTCCACATGAATCTATCAGA+GGG | - | chr3.1:74061259-74061278 | MS.gene06870:intron | 35.0% | |
| TTCCCTATCACTGTTATGTT+TGG | - | chr3.1:74062746-74062765 | MS.gene06870:intron | 35.0% | |
| TTCTCGAAGGCTATATTTCT+TGG | - | chr3.1:74061311-74061330 | MS.gene06870:intron | 35.0% | |
| TTGTTCTTCTACCTTGTCTT+CGG | - | chr3.1:74058974-74058993 | MS.gene06870:CDS | 35.0% | |
| TTTCCACATGAATCTATCAG+AGG | - | chr3.1:74061258-74061277 | MS.gene06870:intron | 35.0% | |
| TTTGGGTCTTCGATGTTATT+CGG | - | chr3.1:74059942-74059961 | MS.gene06870:intron | 35.0% | |
| ! | AAAGTTGTGTTGGCATATTC+TGG | - | chr3.1:74062270-74062289 | MS.gene06870:intron | 35.0% |
| ! | ACAACTAATGGACCCTAAAT+TGG | + | chr3.1:74060945-74060964 | None:intergenic | 35.0% |
| ! | ACCCATGGACTTTTACTTAA+AGG | + | chr3.1:74063135-74063154 | None:intergenic | 35.0% |
| ! | CATCTAGCTTGAAACATGTT+TGG | + | chr3.1:74063076-74063095 | None:intergenic | 35.0% |
| ! | GAAGTGCTATAATTTGAAGG+TGG | - | chr3.1:74060336-74060355 | MS.gene06870:CDS | 35.0% |
| ! | GATCTCATCTTCATAATGGA+TGG | + | chr3.1:74062296-74062315 | None:intergenic | 35.0% |
| ! | TTCATCTGAAACGCAATGAA+TGG | + | chr3.1:74061808-74061827 | None:intergenic | 35.0% |
| !! | ACTTTGGAACTCTTAATGTG+TGG | - | chr3.1:74061613-74061632 | MS.gene06870:intron | 35.0% |
| !! | CAGGAAGTGCTATAATTTGA+AGG | - | chr3.1:74060333-74060352 | MS.gene06870:CDS | 35.0% |
| !! | GTCTTGTTGCCATATTTTCT+GGG | - | chr3.1:74061339-74061358 | MS.gene06870:intron | 35.0% |
| !! | TCCAAAAGATGTTGATTTCC+GGG | - | chr3.1:74061047-74061066 | MS.gene06870:CDS | 35.0% |
| !! | TGCCACTTCACTTCTATTTT+CGG | - | chr3.1:74060197-74060216 | MS.gene06870:intron | 35.0% |
| !!! | GCGTGATTTTGAAATCTGAA+TGG | - | chr3.1:74059352-74059371 | MS.gene06870:intron | 35.0% |
| AAATCACTTTGTTGGCCACT+TGG | + | chr3.1:74061130-74061149 | None:intergenic | 40.0% | |
| AACAGAAGATTGGCAACTCA+AGG | - | chr3.1:74063344-74063363 | MS.gene06870:CDS | 40.0% | |
| AAGATTGGCAACTCAAGGAA+AGG | - | chr3.1:74063349-74063368 | MS.gene06870:CDS | 40.0% | |
| AAGCAACAGATCATAGTGTG+AGG | + | chr3.1:74062850-74062869 | None:intergenic | 40.0% | |
| ACAGTTAGAGATAGAGAGAG+AGG | + | chr3.1:74062650-74062669 | None:intergenic | 40.0% | |
| ACCTTCAAAGAGAGACTGTA+TGG | + | chr3.1:74061850-74061869 | None:intergenic | 40.0% | |
| AGAAATTGCTCCTACACCTT+TGG | - | chr3.1:74062971-74062990 | MS.gene06870:intron | 40.0% | |
| AGATTGGCAACTCAAGGAAA+GGG | - | chr3.1:74063350-74063369 | MS.gene06870:CDS | 40.0% | |
| AGCAACAGATCATAGTGTGA+GGG | + | chr3.1:74062849-74062868 | None:intergenic | 40.0% | |
| AGCAGCAAAGAAAAAACCCA+TGG | + | chr3.1:74063150-74063169 | None:intergenic | 40.0% | |
| CAACTCTTCATTGCTGGATT+TGG | - | chr3.1:74059924-74059943 | MS.gene06870:intron | 40.0% | |
| CAAGAGCCAATGTATCAACA+AGG | + | chr3.1:74061379-74061398 | None:intergenic | 40.0% | |
| CATGCCCAATTAACCAAAGT+GGG | + | chr3.1:74063103-74063122 | None:intergenic | 40.0% | |
| GAGATCTCAATACATTCCTG+AGG | - | chr3.1:74062310-74062329 | MS.gene06870:intron | 40.0% | |
| GAGGCAGGATATATAACACA+AGG | + | chr3.1:74063016-74063035 | None:intergenic | 40.0% | |
| GATTGCCCACTTTGGTTAAT+TGG | - | chr3.1:74063095-74063114 | MS.gene06870:intron | 40.0% | |
| GCATTAATCTACCTAACGAG+TGG | - | chr3.1:74061635-74061654 | MS.gene06870:intron | 40.0% | |
| GCTTTCGATGACATTGTTGT+TGG | - | chr3.1:74059738-74059757 | MS.gene06870:intron | 40.0% | |
| GTAAGATACTAGCCATGAAG+AGG | + | chr3.1:74062787-74062806 | None:intergenic | 40.0% | |
| TAAATCACAGTACCAATGGG+TGG | + | chr3.1:74062121-74062140 | None:intergenic | 40.0% | |
| TACCAAAAATAGCTTGAGGC+AGG | + | chr3.1:74063031-74063050 | None:intergenic | 40.0% | |
| TATCTTTGTCACACAGTGAC+AGG | + | chr3.1:74062921-74062940 | None:intergenic | 40.0% | |
| TCAATATGAAAATCAGGGGC+CGG | - | chr3.1:74060070-74060089 | MS.gene06870:CDS | 40.0% | |
| TCATCATTTGGGCTTAATGC+AGG | + | chr3.1:74061903-74061922 | None:intergenic | 40.0% | |
| TCCAAACAGCCCAGAAAATA+TGG | + | chr3.1:74061351-74061370 | None:intergenic | 40.0% | |
| TCCACATGAATCTATCAGAG+GGG | - | chr3.1:74061260-74061279 | MS.gene06870:intron | 40.0% | |
| TCTGTATTGAGGAGAATGCT+TGG | + | chr3.1:74060145-74060164 | None:intergenic | 40.0% | |
| TCTTAAATACGATGTCTGGG+TGG | - | chr3.1:74062548-74062567 | MS.gene06870:intron | 40.0% | |
| TGCCGAAAATAGAAGTGAAG+TGG | + | chr3.1:74060202-74060221 | None:intergenic | 40.0% | |
| ! | ATAGCTGGTGATTGGTTACA+AGG | - | chr3.1:74059846-74059865 | MS.gene06870:intron | 40.0% |
| ! | ATGTATTTGGTTCGTGTAGC+TGG | + | chr3.1:74063235-74063254 | None:intergenic | 40.0% |
| ! | CAATACAGTTTGATGGCATC+TGG | - | chr3.1:74060881-74060900 | MS.gene06870:CDS | 40.0% |
| ! | CGTTTTTGTATGGCTATAGC+TGG | - | chr3.1:74059831-74059850 | MS.gene06870:intron | 40.0% |
| ! | GCTGCAGGTTTTCTTACAAT+TGG | - | chr3.1:74061422-74061441 | MS.gene06870:intron | 40.0% |
| ! | GTGCTCAATTTTCCTCTTCA+TGG | - | chr3.1:74062772-74062791 | MS.gene06870:intron | 40.0% |
| ! | TATTTTCGGCATTTGAGTCG+TGG | - | chr3.1:74060211-74060230 | MS.gene06870:intron | 40.0% |
| ! | TTGGAATCAACCTAGTTTGC+AGG | + | chr3.1:74061032-74061051 | None:intergenic | 40.0% |
| ! | TTTTGCAAGAAAGGGGTTGT+AGG | + | chr3.1:74062599-74062618 | None:intergenic | 40.0% |
| !! | ATCCTGCCTCAAGCTATTTT+TGG | - | chr3.1:74063026-74063045 | MS.gene06870:intron | 40.0% |
| !! | CCAAAAGATGTTGATTTCCG+GGG | - | chr3.1:74061048-74061067 | MS.gene06870:CDS | 40.0% |
| !! | CTTGTTGATACATTGGCTCT+TGG | - | chr3.1:74061377-74061396 | MS.gene06870:intron | 40.0% |
| !!! | GGGTTTTTTCTTTGCTGCTA+AGG | - | chr3.1:74063151-74063170 | MS.gene06870:intron | 40.0% |
| !!! | GGTCTTGTTGCCATATTTTC+TGG | - | chr3.1:74061338-74061357 | MS.gene06870:intron | 40.0% |
| AAGTCACACAAGCTCTCTTC+CGG | + | chr3.1:74060092-74060111 | None:intergenic | 45.0% | |
| AATACATTCCTGAGGAAGCC+AGG | - | chr3.1:74062318-74062337 | MS.gene06870:intron | 45.0% | |
| AATGATGAAGAGATCCCCCA+TGG | - | chr3.1:74061915-74061934 | MS.gene06870:intron | 45.0% | |
| AGATCTCTGATACTGCAGCA+AGG | - | chr3.1:74063050-74063069 | MS.gene06870:intron | 45.0% | |
| AGCTAGATGATTGCCCACTT+TGG | - | chr3.1:74063087-74063106 | MS.gene06870:intron | 45.0% | |
| AGGAGTCCATAGGAACACAA+AGG | + | chr3.1:74061883-74061902 | None:intergenic | 45.0% | |
| AGTACCACGAGGAGAAAAGT+AGG | - | chr3.1:74060428-74060447 | MS.gene06870:CDS | 45.0% | |
| ATCGGACAACTCTTCATTGC+TGG | - | chr3.1:74059918-74059937 | MS.gene06870:intron | 45.0% | |
| CATAGTGTGAGGGTCTTACT+TGG | + | chr3.1:74062839-74062858 | None:intergenic | 45.0% | |
| CTTGCCCTGCCTATATTATC+TGG | - | chr3.1:74063174-74063193 | MS.gene06870:intron | 45.0% | |
| GCAGAGGCAATACAGTTTGA+TGG | - | chr3.1:74060874-74060893 | MS.gene06870:CDS | 45.0% | |
| GCAGTTCCTACTAAAGCAAC+AGG | - | chr3.1:74062194-74062213 | MS.gene06870:CDS | 45.0% | |
| GCATGCCCAATTAACCAAAG+TGG | + | chr3.1:74063104-74063123 | None:intergenic | 45.0% | |
| GCCATACAGTCTCTCTTTGA+AGG | - | chr3.1:74061846-74061865 | MS.gene06870:intron | 45.0% | |
| GCTAGTTGCTGAGCATTTCA+AGG | - | chr3.1:74060233-74060252 | MS.gene06870:intron | 45.0% | |
| GGATATGGAAAAGGGGAGAT+CGG | - | chr3.1:74059900-74059919 | MS.gene06870:intron | 45.0% | |
| GGGGGATCTCTTCATCATTT+GGG | + | chr3.1:74061914-74061933 | None:intergenic | 45.0% | |
| GTATGGCTATAGCTGGTGAT+TGG | - | chr3.1:74059838-74059857 | MS.gene06870:intron | 45.0% | |
| GTTCCTACTAAAGCAACAGG+TGG | - | chr3.1:74062197-74062216 | MS.gene06870:CDS | 45.0% | |
| TCAACGTGTTCCTGCAAACT+AGG | - | chr3.1:74061019-74061038 | MS.gene06870:CDS | 45.0% | |
| TGGGGGATCTCTTCATCATT+TGG | + | chr3.1:74061915-74061934 | None:intergenic | 45.0% | |
| TTCTTCTACCTTGTCTTCGG+TGG | - | chr3.1:74058977-74058996 | MS.gene06870:CDS | 45.0% | |
| TTGATGTTGGGCCGTATCTT+GGG | - | chr3.1:74060168-74060187 | MS.gene06870:intron | 45.0% | |
| ! | AAAGTTCATGATGGTGCTCC+TGG | + | chr3.1:74062339-74062358 | None:intergenic | 45.0% |
| ! | AGAGCTTGCTTGCCCAATTT+AGG | - | chr3.1:74061501-74061520 | MS.gene06870:intron | 45.0% |
| ! | AGCTTGCTTGCCCAATTTAG+GGG | - | chr3.1:74061503-74061522 | MS.gene06870:intron | 45.0% |
| ! | AGTCACTGAGGCATGGTTTT+TGG | - | chr3.1:74060739-74060758 | MS.gene06870:intron | 45.0% |
| ! | CCCCGGAAATCAACATCTTT+TGG | + | chr3.1:74061051-74061070 | None:intergenic | 45.0% |
| ! | CTACACAAAGCCAAAGGTGT+AGG | + | chr3.1:74062984-74063003 | None:intergenic | 45.0% |
| ! | CTCGCTTGCATCTAAGTTGA+TGG | - | chr3.1:74061980-74061999 | MS.gene06870:intron | 45.0% |
| ! | GAGCTTGCTTGCCCAATTTA+GGG | - | chr3.1:74061502-74061521 | MS.gene06870:intron | 45.0% |
| ! | GCCATATTTTCTGGGCTGTT+TGG | - | chr3.1:74061347-74061366 | MS.gene06870:intron | 45.0% |
| !! | ACAACCTACTTTTCTCCTCG+TGG | + | chr3.1:74060435-74060454 | None:intergenic | 45.0% |
| !! | CAGATTCAATGGCTCTGACT+CGG | + | chr3.1:74063379-74063398 | None:intergenic | 45.0% |
| AAAACCTGCAGCAGCGTCAA+AGG | + | chr3.1:74061414-74061433 | None:intergenic | 50.0% | |
| AAACCTGCAGCAGCGTCAAA+GGG | + | chr3.1:74061413-74061432 | None:intergenic | 50.0% | |
| AATCTACCTAACGAGTGGGC+TGG | - | chr3.1:74061640-74061659 | MS.gene06870:intron | 50.0% | |
| ACCCAAAAGCTGAATGCACC+CGG | + | chr3.1:74062237-74062256 | None:intergenic | 50.0% | |
| ATCACAGTACCAATGGGTGG+AGG | + | chr3.1:74062118-74062137 | None:intergenic | 50.0% | |
| CCTACTAAAGCAACAGGTGG+TGG | - | chr3.1:74062200-74062219 | MS.gene06870:CDS | 50.0% | |
| CTCGAGAACAGCAACAACAG+CGG | + | chr3.1:74059008-74059027 | None:intergenic | 50.0% | |
| CTTGATGTTGGGCCGTATCT+TGG | - | chr3.1:74060167-74060186 | MS.gene06870:intron | 50.0% | |
| GCCCCTCTGATAGATTCATG+TGG | + | chr3.1:74061264-74061283 | None:intergenic | 50.0% | |
| GGCTTAATGCAGGAGTCCAT+AGG | + | chr3.1:74061893-74061912 | None:intergenic | 50.0% | |
| GGTGATGCAGCTTGCAATGT+AGG | + | chr3.1:74060124-74060143 | None:intergenic | 50.0% | |
| TATACTCTCCCTCCACCCAT+TGG | - | chr3.1:74062106-74062125 | MS.gene06870:intron | 50.0% | |
| TCACAGTACCAATGGGTGGA+GGG | + | chr3.1:74062117-74062136 | None:intergenic | 50.0% | |
| TCTGCATGTAGCTCTCCACA+CGG | + | chr3.1:74062019-74062038 | None:intergenic | 50.0% | |
| TGGCAATGCCACCCAAGATA+CGG | + | chr3.1:74060182-74060201 | None:intergenic | 50.0% | |
| ! | AGAGGGGCTTTGATCAGCAA+TGG | - | chr3.1:74061276-74061295 | MS.gene06870:intron | 50.0% |
| ! | TGGGTGGAGGGAGAGTATAT+TGG | + | chr3.1:74062105-74062124 | None:intergenic | 50.0% |
| !! | CCACCACCTGTTGCTTTAGT+AGG | + | chr3.1:74062203-74062222 | None:intergenic | 50.0% |
| !! | TACATTGGCTCTTGGACCAG+TGG | - | chr3.1:74061385-74061404 | MS.gene06870:intron | 50.0% |
| AACCTGCAGCAGCGTCAAAG+GGG | + | chr3.1:74061412-74061431 | None:intergenic | 55.0% | |
| AAGGCGACTGCTCGTGATTG+CGG | - | chr3.1:74062808-74062827 | MS.gene06870:intron | 55.0% | |
| ATGTTGGGCCGTATCTTGGG+TGG | - | chr3.1:74060171-74060190 | MS.gene06870:intron | 55.0% | |
| CACCGCAGCACCCCTAAATT+GGG | + | chr3.1:74061516-74061535 | None:intergenic | 55.0% | |
| CGGCTAATCCACCGAAGACA+AGG | + | chr3.1:74058988-74059007 | None:intergenic | 55.0% | |
| GGCTCGTTCATCATTCCGTG+TGG | - | chr3.1:74062001-74062020 | MS.gene06870:intron | 55.0% | |
| TAATGGCCAGCCCACTCGTT+AGG | + | chr3.1:74061649-74061668 | None:intergenic | 55.0% | |
| ! | GCCGGGTGCATTCAGCTTTT+GGG | - | chr3.1:74062233-74062252 | MS.gene06870:CDS | 55.0% |
| ! | GTAGTGGAGTCACTGAGGCA+TGG | - | chr3.1:74060732-74060751 | MS.gene06870:intron | 55.0% |
| ! | GTGGTGTAGTGGAGTCACTG+AGG | - | chr3.1:74060727-74060746 | MS.gene06870:intron | 55.0% |
| !! | TGCCCAATTTAGGGGTGCTG+CGG | - | chr3.1:74061511-74061530 | MS.gene06870:intron | 55.0% |
| ACCTGCAGCAGCGTCAAAGG+GGG | + | chr3.1:74061411-74061430 | None:intergenic | 60.0% | |
| ATGGTGCTCCTGGCTTCCTC+AGG | + | chr3.1:74062329-74062348 | None:intergenic | 60.0% | |
| CCACCGCAGCACCCCTAAAT+TGG | + | chr3.1:74061517-74061536 | None:intergenic | 60.0% | |
| GTGGTGGTCTCTCATTCGCC+GGG | - | chr3.1:74062216-74062235 | MS.gene06870:CDS | 60.0% | |
| ! | CGCCGGGTGCATTCAGCTTT+TGG | - | chr3.1:74062232-74062251 | MS.gene06870:CDS | 60.0% |
| ! | GGTGGTGGTCTCTCATTCGC+CGG | - | chr3.1:74062215-74062234 | MS.gene06870:CDS | 60.0% |
| !! | CCAATTTAGGGGTGCTGCGG+TGG | - | chr3.1:74061514-74061533 | MS.gene06870:intron | 60.0% |
| GCTGCGGTGGCCATTGCTTC+TGG | - | chr3.1:74061527-74061546 | MS.gene06870:intron | 65.0% | |
| GCAGCGTCAAAGGGGGCCAC+TGG | + | chr3.1:74061404-74061423 | None:intergenic | 70.0% | |
| GCCCCCTTTGACGCTGCTGC+AGG | - | chr3.1:74061407-74061426 | MS.gene06870:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 74058968 | 74063401 | 74058968 | ID=MS.gene06870 |
| chr3.1 | mRNA | 74058968 | 74063401 | 74058968 | ID=MS.gene06870.t1;Parent=MS.gene06870 |
| chr3.1 | exon | 74063251 | 74063401 | 74063251 | ID=MS.gene06870.t1.exon1;Parent=MS.gene06870.t1 |
| chr3.1 | CDS | 74063251 | 74063401 | 74063251 | ID=cds.MS.gene06870.t1;Parent=MS.gene06870.t1 |
| chr3.1 | exon | 74062375 | 74062519 | 74062375 | ID=MS.gene06870.t1.exon2;Parent=MS.gene06870.t1 |
| chr3.1 | CDS | 74062375 | 74062519 | 74062375 | ID=cds.MS.gene06870.t1;Parent=MS.gene06870.t1 |
| chr3.1 | exon | 74062115 | 74062283 | 74062115 | ID=MS.gene06870.t1.exon3;Parent=MS.gene06870.t1 |
| chr3.1 | CDS | 74062115 | 74062283 | 74062115 | ID=cds.MS.gene06870.t1;Parent=MS.gene06870.t1 |
| chr3.1 | exon | 74060821 | 74061091 | 74060821 | ID=MS.gene06870.t1.exon4;Parent=MS.gene06870.t1 |
| chr3.1 | CDS | 74060821 | 74061091 | 74060821 | ID=cds.MS.gene06870.t1;Parent=MS.gene06870.t1 |
| chr3.1 | exon | 74060281 | 74060546 | 74060281 | ID=MS.gene06870.t1.exon5;Parent=MS.gene06870.t1 |
| chr3.1 | CDS | 74060281 | 74060546 | 74060281 | ID=cds.MS.gene06870.t1;Parent=MS.gene06870.t1 |
| chr3.1 | exon | 74059966 | 74060181 | 74059966 | ID=MS.gene06870.t1.exon6;Parent=MS.gene06870.t1 |
| chr3.1 | CDS | 74059966 | 74060181 | 74059966 | ID=cds.MS.gene06870.t1;Parent=MS.gene06870.t1 |
| chr3.1 | exon | 74059530 | 74059632 | 74059530 | ID=MS.gene06870.t1.exon7;Parent=MS.gene06870.t1 |
| chr3.1 | CDS | 74059530 | 74059632 | 74059530 | ID=cds.MS.gene06870.t1;Parent=MS.gene06870.t1 |
| chr3.1 | exon | 74058968 | 74059026 | 74058968 | ID=MS.gene06870.t1.exon8;Parent=MS.gene06870.t1 |
| chr3.1 | CDS | 74058968 | 74059026 | 74058968 | ID=cds.MS.gene06870.t1;Parent=MS.gene06870.t1 |
| Gene Sequence |
| Protein sequence |
