Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068735.t1 | RHN75081.1 | 95.8 | 310 | 12 | 1 | 1 | 310 | 51 | 359 | 5.30E-174 | 620.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068735.t1 | Q9FJ45 | 45.1 | 315 | 153 | 7 | 5 | 301 | 58 | 370 | 9.2e-74 | 278.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068735.t1 | A0A396JEK6 | 95.8 | 310 | 12 | 1 | 1 | 310 | 51 | 359 | 3.9e-174 | 620.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene002553 | MS.gene068735 | PPI |
MS.gene068735 | MS.gene002554 | PPI |
MS.gene004227 | MS.gene068735 | PPI |
MS.gene01535 | MS.gene068735 | PPI |
MS.gene54325 | MS.gene068735 | PPI |
MS.gene068735 | MS.gene002555 | PPI |
MS.gene004228 | MS.gene068735 | PPI |
MS.gene068735 | MS.gene004229 | PPI |
MS.gene01536 | MS.gene068735 | PPI |
MS.gene54327 | MS.gene068735 | PPI |
MS.gene01537 | MS.gene068735 | PPI |
MS.gene068735 | MS.gene54326 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068735.t1 | MTR_0029s0050 | 94.516 | 310 | 16 | 1 | 1 | 310 | 51 | 359 | 0.0 | 608 |
MS.gene068735.t1 | MTR_2g079090 | 94.839 | 310 | 15 | 1 | 1 | 310 | 51 | 359 | 0.0 | 605 |
MS.gene068735.t1 | MTR_0029s0100 | 93.871 | 310 | 18 | 1 | 1 | 310 | 51 | 359 | 0.0 | 602 |
MS.gene068735.t1 | MTR_2g079080 | 94.194 | 310 | 17 | 1 | 1 | 310 | 51 | 359 | 0.0 | 602 |
MS.gene068735.t1 | MTR_3g448360 | 69.659 | 323 | 82 | 6 | 1 | 309 | 50 | 370 | 6.27e-158 | 446 |
MS.gene068735.t1 | MTR_3g463960 | 66.049 | 324 | 95 | 4 | 1 | 310 | 66 | 388 | 6.32e-157 | 444 |
MS.gene068735.t1 | MTR_3g463950 | 66.049 | 324 | 95 | 4 | 1 | 310 | 66 | 388 | 6.32e-157 | 444 |
MS.gene068735.t1 | MTR_3g463970 | 66.049 | 324 | 95 | 4 | 1 | 310 | 66 | 388 | 6.32e-157 | 444 |
MS.gene068735.t1 | MTR_3g463940 | 66.049 | 324 | 95 | 4 | 1 | 310 | 66 | 388 | 6.32e-157 | 444 |
MS.gene068735.t1 | MTR_3g069780 | 70.370 | 324 | 78 | 7 | 1 | 310 | 52 | 371 | 1.72e-156 | 442 |
MS.gene068735.t1 | MTR_3g438030 | 70.062 | 324 | 79 | 7 | 1 | 310 | 52 | 371 | 3.65e-155 | 439 |
MS.gene068735.t1 | MTR_3g463930 | 64.350 | 331 | 96 | 5 | 1 | 310 | 66 | 395 | 4.99e-151 | 429 |
MS.gene068735.t1 | MTR_3g069520 | 66.981 | 318 | 90 | 5 | 6 | 310 | 54 | 369 | 1.13e-148 | 422 |
MS.gene068735.t1 | MTR_2g043980 | 61.661 | 313 | 112 | 5 | 1 | 310 | 54 | 361 | 1.13e-133 | 384 |
MS.gene068735.t1 | MTR_2g015650 | 52.366 | 317 | 137 | 4 | 6 | 310 | 60 | 374 | 2.11e-109 | 322 |
MS.gene068735.t1 | MTR_2g015670 | 48.580 | 317 | 135 | 5 | 6 | 310 | 60 | 360 | 2.04e-98 | 294 |
MS.gene068735.t1 | MTR_2g015630 | 47.962 | 319 | 144 | 6 | 6 | 307 | 60 | 373 | 1.19e-94 | 285 |
MS.gene068735.t1 | MTR_2g015580 | 44.409 | 313 | 154 | 7 | 6 | 303 | 76 | 383 | 7.93e-85 | 261 |
MS.gene068735.t1 | MTR_2g043990 | 53.659 | 246 | 87 | 5 | 1 | 243 | 116 | 337 | 1.69e-80 | 248 |
MS.gene068735.t1 | MTR_2g015590 | 43.087 | 311 | 162 | 5 | 6 | 303 | 60 | 368 | 1.82e-79 | 246 |
MS.gene068735.t1 | MTR_4g104240 | 36.482 | 307 | 175 | 7 | 6 | 300 | 69 | 367 | 1.55e-63 | 205 |
MS.gene068735.t1 | MTR_3g466240 | 52.113 | 213 | 64 | 5 | 52 | 257 | 2 | 183 | 1.08e-60 | 192 |
MS.gene068735.t1 | MTR_2g015590 | 43.154 | 241 | 134 | 3 | 6 | 244 | 60 | 299 | 3.65e-57 | 187 |
MS.gene068735.t1 | MTR_3g466190 | 56.287 | 167 | 50 | 7 | 7 | 172 | 7 | 151 | 5.36e-49 | 163 |
MS.gene068735.t1 | MTR_3g466190 | 57.692 | 78 | 23 | 1 | 243 | 310 | 152 | 229 | 5.08e-21 | 90.1 |
MS.gene068735.t1 | MTR_1g030268 | 34.650 | 329 | 173 | 11 | 4 | 303 | 62 | 377 | 6.51e-48 | 165 |
MS.gene068735.t1 | MTR_8g028160 | 33.232 | 328 | 179 | 11 | 3 | 300 | 57 | 374 | 1.53e-46 | 161 |
MS.gene068735.t1 | MTR_1g030275 | 33.739 | 329 | 176 | 11 | 4 | 303 | 61 | 376 | 2.75e-44 | 155 |
MS.gene068735.t1 | MTR_7g116870 | 33.022 | 321 | 179 | 9 | 6 | 300 | 57 | 367 | 5.29e-44 | 154 |
MS.gene068735.t1 | MTR_1g030220 | 31.722 | 331 | 185 | 11 | 2 | 303 | 61 | 379 | 5.78e-43 | 152 |
MS.gene068735.t1 | MTR_8g089805 | 31.212 | 330 | 186 | 11 | 4 | 302 | 62 | 381 | 6.04e-42 | 149 |
MS.gene068735.t1 | MTR_7g087190 | 30.395 | 329 | 187 | 12 | 6 | 302 | 67 | 385 | 8.25e-42 | 149 |
MS.gene068735.t1 | MTR_1g030340 | 31.250 | 336 | 176 | 12 | 4 | 302 | 64 | 381 | 1.05e-40 | 146 |
MS.gene068735.t1 | MTR_7g033165 | 30.247 | 324 | 199 | 6 | 1 | 301 | 52 | 371 | 2.03e-39 | 142 |
MS.gene068735.t1 | MTR_1g030230 | 31.193 | 327 | 185 | 10 | 5 | 302 | 55 | 370 | 4.21e-39 | 141 |
MS.gene068735.t1 | MTR_7g113860 | 30.247 | 324 | 186 | 9 | 6 | 300 | 54 | 366 | 9.03e-39 | 140 |
MS.gene068735.t1 | MTR_7g113860 | 29.483 | 329 | 182 | 9 | 6 | 300 | 60 | 372 | 9.82e-39 | 140 |
MS.gene068735.t1 | MTR_6g007090 | 30.990 | 313 | 193 | 8 | 6 | 300 | 63 | 370 | 2.46e-37 | 137 |
MS.gene068735.t1 | MTR_7g033150 | 30.838 | 334 | 188 | 11 | 2 | 302 | 55 | 378 | 1.14e-36 | 135 |
MS.gene068735.t1 | MTR_1g082390 | 28.963 | 328 | 197 | 9 | 2 | 303 | 53 | 370 | 2.70e-36 | 134 |
MS.gene068735.t1 | MTR_7g111780 | 28.261 | 322 | 202 | 8 | 1 | 307 | 56 | 363 | 4.10e-36 | 133 |
MS.gene068735.t1 | MTR_7g033155 | 28.779 | 344 | 193 | 11 | 2 | 302 | 58 | 392 | 5.29e-34 | 128 |
MS.gene068735.t1 | MTR_6g007095 | 30.696 | 316 | 190 | 10 | 6 | 300 | 65 | 372 | 5.32e-34 | 131 |
MS.gene068735.t1 | MTR_6g007095 | 28.808 | 302 | 205 | 6 | 6 | 302 | 394 | 690 | 3.78e-31 | 123 |
MS.gene068735.t1 | MTR_1g030265 | 30.565 | 301 | 171 | 9 | 30 | 302 | 53 | 343 | 1.92e-33 | 126 |
MS.gene068735.t1 | MTR_1g030268 | 34.470 | 264 | 148 | 9 | 4 | 253 | 62 | 314 | 3.14e-33 | 125 |
MS.gene068735.t1 | MTR_8g038680 | 29.483 | 329 | 182 | 12 | 6 | 300 | 52 | 364 | 1.02e-30 | 119 |
MS.gene068735.t1 | MTR_6g007100 | 29.773 | 309 | 195 | 9 | 2 | 300 | 57 | 353 | 3.13e-29 | 115 |
MS.gene068735.t1 | MTR_8g089805 | 28.763 | 299 | 172 | 11 | 35 | 302 | 25 | 313 | 6.13e-29 | 113 |
MS.gene068735.t1 | MTR_8g022810 | 27.778 | 306 | 182 | 9 | 3 | 289 | 67 | 352 | 8.00e-28 | 111 |
MS.gene068735.t1 | MTR_7g113860 | 27.036 | 307 | 174 | 9 | 28 | 300 | 8 | 298 | 6.37e-27 | 107 |
MS.gene068735.t1 | MTR_7g033165 | 30.380 | 237 | 156 | 3 | 1 | 230 | 52 | 286 | 6.77e-27 | 107 |
MS.gene068735.t1 | MTR_1g025780 | 28.525 | 305 | 184 | 11 | 6 | 294 | 68 | 354 | 7.54e-27 | 108 |
MS.gene068735.t1 | MTR_2g033930 | 28.852 | 305 | 186 | 10 | 6 | 295 | 59 | 347 | 2.46e-25 | 104 |
MS.gene068735.t1 | MTR_2g015080 | 29.373 | 303 | 177 | 13 | 6 | 285 | 65 | 353 | 4.03e-25 | 103 |
MS.gene068735.t1 | MTR_8g031420 | 26.814 | 317 | 189 | 11 | 6 | 305 | 64 | 354 | 4.11e-25 | 103 |
MS.gene068735.t1 | MTR_7g111780 | 27.839 | 273 | 162 | 9 | 53 | 307 | 9 | 264 | 2.17e-24 | 100 |
MS.gene068735.t1 | MTR_4g056160 | 26.948 | 308 | 194 | 9 | 3 | 293 | 51 | 344 | 2.44e-24 | 101 |
MS.gene068735.t1 | MTR_5g009100 | 27.184 | 309 | 189 | 11 | 5 | 295 | 72 | 362 | 3.35e-24 | 101 |
MS.gene068735.t1 | MTR_4g056280 | 28.105 | 306 | 184 | 11 | 6 | 293 | 57 | 344 | 1.05e-23 | 99.8 |
MS.gene068735.t1 | MTR_8g031390 | 26.837 | 313 | 193 | 12 | 6 | 305 | 66 | 355 | 1.10e-23 | 100 |
MS.gene068735.t1 | MTR_8g031430 | 28.302 | 318 | 193 | 12 | 1 | 305 | 61 | 356 | 1.70e-23 | 99.4 |
MS.gene068735.t1 | MTR_5g022630 | 28.428 | 299 | 183 | 10 | 6 | 288 | 71 | 354 | 2.67e-23 | 99.0 |
MS.gene068735.t1 | MTR_1g025680 | 29.180 | 305 | 183 | 11 | 6 | 294 | 62 | 349 | 5.12e-23 | 99.0 |
MS.gene068735.t1 | MTR_8g014910 | 26.230 | 305 | 192 | 10 | 6 | 293 | 59 | 347 | 7.21e-22 | 94.7 |
MS.gene068735.t1 | MTR_3g005660 | 26.415 | 318 | 199 | 13 | 6 | 306 | 63 | 362 | 1.81e-21 | 93.6 |
MS.gene068735.t1 | MTR_2g100620 | 26.384 | 307 | 189 | 12 | 6 | 293 | 58 | 346 | 2.29e-21 | 93.2 |
MS.gene068735.t1 | MTR_3g082830 | 27.244 | 312 | 181 | 12 | 6 | 294 | 65 | 353 | 2.40e-21 | 93.2 |
MS.gene068735.t1 | MTR_3g098270 | 27.500 | 320 | 194 | 12 | 6 | 306 | 61 | 361 | 3.83e-21 | 92.8 |
MS.gene068735.t1 | MTR_2g033920 | 29.073 | 313 | 183 | 11 | 3 | 295 | 59 | 352 | 5.08e-21 | 92.4 |
MS.gene068735.t1 | MTR_5g022640 | 27.273 | 308 | 193 | 9 | 3 | 294 | 67 | 359 | 7.09e-21 | 92.0 |
MS.gene068735.t1 | MTR_1g025700 | 27.687 | 307 | 185 | 13 | 6 | 294 | 77 | 364 | 1.58e-20 | 90.9 |
MS.gene068735.t1 | MTR_1g025720 | 27.907 | 301 | 182 | 12 | 6 | 289 | 64 | 346 | 1.58e-20 | 90.9 |
MS.gene068735.t1 | MTR_2g044100 | 28.254 | 315 | 182 | 12 | 6 | 298 | 72 | 364 | 2.83e-20 | 90.5 |
MS.gene068735.t1 | MTR_3g464730 | 26.518 | 313 | 183 | 12 | 6 | 294 | 55 | 344 | 2.93e-20 | 90.1 |
MS.gene068735.t1 | MTR_5g078210 | 25.839 | 298 | 189 | 10 | 14 | 297 | 62 | 341 | 1.18e-19 | 88.2 |
MS.gene068735.t1 | MTR_8g031400 | 28.662 | 314 | 187 | 14 | 6 | 305 | 66 | 356 | 1.86e-19 | 87.8 |
MS.gene068735.t1 | MTR_8g079050 | 26.349 | 315 | 193 | 11 | 2 | 295 | 64 | 360 | 2.08e-19 | 87.8 |
MS.gene068735.t1 | MTR_5g084790 | 27.362 | 307 | 187 | 12 | 6 | 294 | 59 | 347 | 5.04e-19 | 86.7 |
MS.gene068735.t1 | MTR_3g005650 | 26.059 | 307 | 194 | 10 | 3 | 295 | 54 | 341 | 5.19e-19 | 86.7 |
MS.gene068735.t1 | MTR_3g052490 | 26.974 | 304 | 182 | 10 | 13 | 296 | 68 | 351 | 7.51e-19 | 86.3 |
MS.gene068735.t1 | MTR_5g084750 | 26.603 | 312 | 191 | 11 | 6 | 298 | 57 | 349 | 7.53e-19 | 86.3 |
MS.gene068735.t1 | MTR_8g087890 | 25.658 | 304 | 189 | 12 | 5 | 290 | 57 | 341 | 8.80e-19 | 85.9 |
MS.gene068735.t1 | MTR_8g031390 | 27.381 | 252 | 162 | 9 | 6 | 256 | 66 | 297 | 9.15e-19 | 85.5 |
MS.gene068735.t1 | MTR_5g084770 | 25.839 | 298 | 185 | 8 | 14 | 293 | 64 | 343 | 2.15e-18 | 84.7 |
MS.gene068735.t1 | MTR_3g024510 | 24.172 | 302 | 200 | 9 | 3 | 290 | 62 | 348 | 2.92e-18 | 84.7 |
MS.gene068735.t1 | MTR_4g035353 | 25.490 | 306 | 198 | 11 | 6 | 296 | 58 | 348 | 4.56e-18 | 84.0 |
MS.gene068735.t1 | MTR_0565s0010 | 23.934 | 305 | 198 | 12 | 3 | 290 | 56 | 343 | 4.68e-18 | 84.0 |
MS.gene068735.t1 | MTR_4g087985 | 28.904 | 301 | 179 | 14 | 6 | 285 | 63 | 349 | 6.67e-18 | 83.6 |
MS.gene068735.t1 | MTR_1g025910 | 26.667 | 300 | 180 | 13 | 6 | 286 | 63 | 341 | 7.61e-18 | 83.6 |
MS.gene068735.t1 | MTR_3g435540 | 26.936 | 297 | 181 | 10 | 15 | 294 | 61 | 338 | 8.36e-18 | 83.2 |
MS.gene068735.t1 | MTR_1g025760 | 27.362 | 307 | 187 | 12 | 6 | 294 | 107 | 395 | 2.97e-17 | 82.0 |
MS.gene068735.t1 | MTR_5g074270 | 27.184 | 309 | 185 | 11 | 3 | 290 | 57 | 346 | 3.55e-17 | 81.3 |
MS.gene068735.t1 | MTR_8g012540 | 28.517 | 263 | 167 | 9 | 6 | 256 | 52 | 305 | 3.62e-17 | 81.3 |
MS.gene068735.t1 | MTR_4g122200 | 25.402 | 311 | 197 | 9 | 1 | 295 | 61 | 352 | 4.45e-17 | 81.3 |
MS.gene068735.t1 | MTR_8g022810 | 30.387 | 181 | 107 | 5 | 3 | 176 | 67 | 235 | 2.05e-16 | 79.0 |
MS.gene068735.t1 | MTR_0009s0250 | 26.490 | 302 | 181 | 12 | 15 | 301 | 70 | 345 | 2.52e-16 | 79.0 |
MS.gene068735.t1 | MTR_3g021460 | 24.752 | 303 | 196 | 10 | 3 | 295 | 55 | 335 | 3.05e-16 | 78.6 |
MS.gene068735.t1 | MTR_4g108690 | 26.333 | 300 | 179 | 12 | 15 | 294 | 65 | 342 | 3.06e-16 | 78.6 |
MS.gene068735.t1 | MTR_5g093090 | 26.433 | 314 | 182 | 13 | 7 | 295 | 57 | 346 | 3.46e-16 | 78.6 |
MS.gene068735.t1 | MTR_5g087690 | 25.083 | 303 | 194 | 9 | 20 | 305 | 83 | 369 | 3.79e-16 | 78.6 |
MS.gene068735.t1 | MTR_8g075230 | 24.918 | 305 | 197 | 10 | 6 | 294 | 63 | 351 | 4.07e-16 | 78.2 |
MS.gene068735.t1 | MTR_3g114090 | 26.214 | 309 | 193 | 11 | 3 | 294 | 61 | 351 | 6.02e-16 | 77.8 |
MS.gene068735.t1 | MTR_3g052580 | 26.471 | 306 | 180 | 11 | 13 | 296 | 64 | 346 | 6.53e-16 | 77.8 |
MS.gene068735.t1 | MTR_3g052580 | 26.471 | 306 | 180 | 11 | 13 | 296 | 63 | 345 | 6.71e-16 | 78.2 |
MS.gene068735.t1 | MTR_8g022790 | 25.503 | 298 | 196 | 11 | 6 | 295 | 66 | 345 | 2.94e-15 | 75.9 |
MS.gene068735.t1 | MTR_6g021530 | 25.633 | 316 | 196 | 12 | 6 | 300 | 56 | 353 | 5.60e-15 | 75.1 |
MS.gene068735.t1 | MTR_8g075200 | 26.333 | 300 | 178 | 10 | 16 | 294 | 79 | 356 | 1.13e-14 | 74.3 |
MS.gene068735.t1 | MTR_1g060490 | 25.902 | 305 | 172 | 13 | 6 | 288 | 62 | 334 | 1.22e-14 | 73.9 |
MS.gene068735.t1 | MTR_2g084585 | 24.590 | 305 | 196 | 11 | 6 | 293 | 57 | 344 | 2.87e-14 | 72.8 |
MS.gene068735.t1 | MTR_3g023220 | 24.920 | 313 | 196 | 11 | 6 | 306 | 60 | 345 | 3.59e-14 | 72.4 |
MS.gene068735.t1 | MTR_1g060500 | 25.786 | 318 | 174 | 16 | 5 | 292 | 64 | 349 | 1.20e-13 | 70.9 |
MS.gene068735.t1 | MTR_8g075220 | 24.920 | 313 | 192 | 11 | 6 | 294 | 67 | 360 | 5.01e-13 | 69.3 |
MS.gene068735.t1 | MTR_2g033920 | 27.519 | 258 | 158 | 8 | 6 | 251 | 62 | 302 | 8.15e-13 | 68.2 |
MS.gene068735.t1 | MTR_3g114120 | 28.990 | 307 | 172 | 17 | 6 | 289 | 74 | 357 | 9.61e-13 | 68.6 |
MS.gene068735.t1 | MTR_7g104220 | 26.537 | 309 | 174 | 17 | 6 | 292 | 67 | 344 | 1.14e-12 | 68.2 |
MS.gene068735.t1 | MTR_2g017965 | 25.084 | 299 | 187 | 13 | 6 | 289 | 61 | 337 | 1.53e-12 | 67.8 |
MS.gene068735.t1 | MTR_2g017875 | 25.994 | 327 | 190 | 15 | 2 | 306 | 57 | 353 | 1.88e-12 | 67.4 |
MS.gene068735.t1 | MTR_7g116500 | 23.279 | 305 | 204 | 8 | 6 | 295 | 60 | 349 | 4.91e-12 | 66.2 |
MS.gene068735.t1 | MTR_1g092750 | 24.359 | 312 | 183 | 15 | 6 | 292 | 63 | 346 | 1.07e-11 | 65.1 |
MS.gene068735.t1 | MTR_1108s0010 | 31.544 | 149 | 86 | 3 | 158 | 298 | 68 | 208 | 2.36e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068735.t1 | AT5G45910 | 45.079 | 315 | 153 | 7 | 5 | 301 | 58 | 370 | 1.19e-89 | 272 |
MS.gene068735.t1 | AT1G28610 | 45.484 | 310 | 154 | 5 | 5 | 302 | 60 | 366 | 4.12e-86 | 263 |
MS.gene068735.t1 | AT1G28590 | 43.730 | 311 | 159 | 6 | 6 | 303 | 66 | 373 | 5.31e-81 | 251 |
MS.gene068735.t1 | AT1G28570 | 42.532 | 308 | 163 | 5 | 5 | 300 | 63 | 368 | 3.79e-80 | 248 |
MS.gene068735.t1 | AT1G28600 | 43.831 | 308 | 156 | 7 | 6 | 300 | 61 | 364 | 1.99e-79 | 247 |
MS.gene068735.t1 | AT2G27360 | 42.857 | 308 | 161 | 5 | 6 | 300 | 63 | 368 | 5.40e-78 | 243 |
MS.gene068735.t1 | AT1G28580 | 41.883 | 308 | 163 | 6 | 6 | 300 | 67 | 371 | 2.28e-77 | 241 |
MS.gene068735.t1 | AT1G28670 | 40.836 | 311 | 169 | 5 | 5 | 302 | 64 | 372 | 6.19e-75 | 235 |
MS.gene068735.t1 | AT1G31550 | 42.208 | 308 | 161 | 7 | 6 | 300 | 66 | 369 | 1.16e-74 | 234 |
MS.gene068735.t1 | AT1G28660 | 40.968 | 310 | 167 | 6 | 6 | 302 | 65 | 371 | 4.02e-74 | 233 |
MS.gene068735.t1 | AT1G28650 | 40.323 | 310 | 171 | 4 | 5 | 302 | 66 | 373 | 1.07e-73 | 232 |
MS.gene068735.t1 | AT1G28640 | 40.514 | 311 | 169 | 6 | 5 | 302 | 64 | 371 | 1.66e-73 | 231 |
MS.gene068735.t1 | AT1G28660 | 40.968 | 310 | 166 | 7 | 6 | 302 | 65 | 370 | 1.85e-73 | 231 |
MS.gene068735.t1 | AT1G31550 | 41.234 | 308 | 161 | 7 | 6 | 300 | 66 | 366 | 3.59e-71 | 225 |
MS.gene068735.t1 | AT1G28580 | 38.754 | 289 | 161 | 6 | 25 | 300 | 5 | 290 | 1.32e-63 | 203 |
MS.gene068735.t1 | AT3G48460 | 35.000 | 320 | 180 | 7 | 6 | 308 | 68 | 376 | 6.31e-59 | 193 |
MS.gene068735.t1 | AT5G03980 | 38.996 | 259 | 138 | 5 | 46 | 292 | 60 | 310 | 2.41e-55 | 182 |
MS.gene068735.t1 | AT1G28570 | 38.756 | 209 | 116 | 3 | 104 | 300 | 88 | 296 | 4.53e-45 | 155 |
MS.gene068735.t1 | AT1G28570 | 38.916 | 203 | 112 | 3 | 110 | 300 | 3 | 205 | 1.43e-44 | 152 |
MS.gene068735.t1 | AT1G54790 | 30.357 | 336 | 191 | 10 | 3 | 307 | 55 | 378 | 3.90e-42 | 150 |
MS.gene068735.t1 | AT3G05180 | 30.982 | 326 | 186 | 11 | 1 | 298 | 57 | 371 | 1.56e-40 | 145 |
MS.gene068735.t1 | AT4G01130 | 32.000 | 325 | 181 | 10 | 6 | 300 | 58 | 372 | 3.07e-40 | 144 |
MS.gene068735.t1 | AT1G56670 | 28.662 | 314 | 198 | 7 | 2 | 300 | 61 | 363 | 3.67e-38 | 139 |
MS.gene068735.t1 | AT1G54790 | 28.743 | 334 | 196 | 9 | 5 | 307 | 55 | 377 | 4.27e-38 | 139 |
MS.gene068735.t1 | AT1G67830 | 29.688 | 320 | 186 | 9 | 6 | 295 | 54 | 364 | 2.95e-37 | 136 |
MS.gene068735.t1 | AT3G26430 | 30.631 | 333 | 184 | 10 | 4 | 302 | 53 | 372 | 1.15e-36 | 135 |
MS.gene068735.t1 | AT5G14450 | 29.193 | 322 | 193 | 8 | 6 | 300 | 65 | 378 | 4.49e-36 | 134 |
MS.gene068735.t1 | AT1G28600 | 45.695 | 151 | 78 | 4 | 6 | 155 | 61 | 208 | 1.41e-34 | 125 |
MS.gene068735.t1 | AT3G62280 | 27.900 | 319 | 194 | 9 | 1 | 300 | 56 | 357 | 3.67e-34 | 128 |
MS.gene068735.t1 | AT1G28610 | 44.872 | 156 | 84 | 2 | 5 | 160 | 60 | 213 | 4.57e-34 | 125 |
MS.gene068735.t1 | AT1G54790 | 27.095 | 358 | 197 | 10 | 5 | 307 | 55 | 403 | 4.53e-33 | 126 |
MS.gene068735.t1 | AT1G09390 | 26.837 | 313 | 199 | 8 | 5 | 300 | 61 | 360 | 1.03e-32 | 124 |
MS.gene068735.t1 | AT3G27950 | 29.412 | 323 | 192 | 8 | 4 | 302 | 54 | 364 | 6.08e-32 | 122 |
MS.gene068735.t1 | AT4G01130 | 32.932 | 249 | 149 | 7 | 6 | 244 | 58 | 298 | 1.83e-30 | 117 |
MS.gene068735.t1 | AT1G56670 | 28.455 | 246 | 164 | 5 | 2 | 244 | 61 | 297 | 5.14e-27 | 107 |
MS.gene068735.t1 | AT4G01130 | 28.716 | 296 | 171 | 10 | 35 | 300 | 1 | 286 | 3.04e-25 | 102 |
MS.gene068735.t1 | AT1G75880 | 28.956 | 297 | 174 | 10 | 16 | 294 | 90 | 367 | 7.68e-25 | 103 |
MS.gene068735.t1 | AT1G20120 | 27.619 | 315 | 191 | 11 | 3 | 297 | 102 | 399 | 2.21e-23 | 99.4 |
MS.gene068735.t1 | AT1G75880 | 28.859 | 298 | 174 | 11 | 16 | 294 | 90 | 368 | 3.70e-23 | 98.6 |
MS.gene068735.t1 | AT1G75890 | 27.119 | 295 | 184 | 10 | 15 | 294 | 85 | 363 | 4.55e-23 | 98.2 |
MS.gene068735.t1 | AT1G75890 | 27.243 | 301 | 189 | 10 | 15 | 294 | 85 | 376 | 5.36e-23 | 98.2 |
MS.gene068735.t1 | AT1G75890 | 27.119 | 295 | 184 | 10 | 15 | 294 | 114 | 392 | 6.18e-23 | 98.2 |
MS.gene068735.t1 | AT3G53100 | 26.214 | 309 | 192 | 12 | 3 | 293 | 53 | 343 | 8.19e-23 | 97.4 |
MS.gene068735.t1 | AT1G71120 | 25.733 | 307 | 188 | 8 | 6 | 295 | 59 | 342 | 1.58e-22 | 96.7 |
MS.gene068735.t1 | AT4G10950 | 24.510 | 306 | 201 | 10 | 5 | 295 | 97 | 387 | 2.36e-22 | 96.7 |
MS.gene068735.t1 | AT1G73610 | 27.575 | 301 | 187 | 10 | 3 | 294 | 59 | 337 | 3.06e-22 | 95.5 |
MS.gene068735.t1 | AT5G15720 | 27.124 | 306 | 187 | 12 | 3 | 289 | 54 | 342 | 3.90e-22 | 95.5 |
MS.gene068735.t1 | AT3G62280 | 27.092 | 251 | 161 | 7 | 1 | 244 | 56 | 291 | 4.23e-22 | 94.4 |
MS.gene068735.t1 | AT5G45950 | 27.333 | 300 | 182 | 13 | 6 | 290 | 67 | 345 | 2.25e-21 | 93.2 |
MS.gene068735.t1 | AT3G14225 | 26.332 | 319 | 196 | 11 | 6 | 305 | 66 | 364 | 2.57e-21 | 93.2 |
MS.gene068735.t1 | AT1G71691 | 27.476 | 313 | 183 | 10 | 3 | 295 | 79 | 367 | 3.61e-21 | 93.2 |
MS.gene068735.t1 | AT1G23500 | 27.303 | 304 | 187 | 12 | 3 | 295 | 59 | 339 | 3.77e-21 | 92.4 |
MS.gene068735.t1 | AT2G40250 | 27.796 | 313 | 188 | 12 | 6 | 297 | 63 | 358 | 4.67e-21 | 92.4 |
MS.gene068735.t1 | AT1G20132 | 27.362 | 307 | 187 | 11 | 6 | 294 | 88 | 376 | 1.05e-20 | 91.7 |
MS.gene068735.t1 | AT5G63170 | 26.298 | 289 | 183 | 10 | 6 | 285 | 55 | 322 | 1.94e-20 | 90.5 |
MS.gene068735.t1 | AT3G14820 | 26.948 | 308 | 181 | 11 | 6 | 293 | 59 | 342 | 2.07e-20 | 90.5 |
MS.gene068735.t1 | AT3G14225 | 27.103 | 321 | 195 | 12 | 6 | 305 | 66 | 368 | 3.21e-20 | 90.5 |
MS.gene068735.t1 | AT2G42990 | 28.053 | 303 | 180 | 12 | 6 | 289 | 55 | 338 | 5.11e-20 | 89.4 |
MS.gene068735.t1 | AT4G10950 | 24.183 | 306 | 198 | 11 | 5 | 295 | 97 | 383 | 1.01e-19 | 89.0 |
MS.gene068735.t1 | AT1G20135 | 24.490 | 294 | 194 | 9 | 3 | 288 | 53 | 326 | 1.13e-19 | 88.2 |
MS.gene068735.t1 | AT1G71250 | 25.321 | 312 | 203 | 10 | 3 | 299 | 65 | 361 | 1.44e-19 | 88.6 |
MS.gene068735.t1 | AT1G29670 | 26.230 | 305 | 189 | 12 | 3 | 290 | 56 | 341 | 2.13e-19 | 87.8 |
MS.gene068735.t1 | AT1G74460 | 25.676 | 296 | 186 | 9 | 15 | 294 | 61 | 338 | 3.16e-19 | 87.4 |
MS.gene068735.t1 | AT1G75900 | 24.756 | 307 | 194 | 11 | 5 | 293 | 69 | 356 | 3.63e-19 | 87.0 |
MS.gene068735.t1 | AT1G29670 | 26.557 | 305 | 188 | 12 | 3 | 290 | 124 | 409 | 6.04e-19 | 87.0 |
MS.gene068735.t1 | AT5G42170 | 25.333 | 300 | 197 | 10 | 6 | 293 | 77 | 361 | 9.42e-19 | 85.9 |
MS.gene068735.t1 | AT5G08460 | 27.687 | 307 | 186 | 13 | 3 | 289 | 73 | 363 | 1.45e-18 | 85.5 |
MS.gene068735.t1 | AT1G53920 | 25.962 | 312 | 199 | 11 | 6 | 302 | 77 | 371 | 7.41e-18 | 83.6 |
MS.gene068735.t1 | AT2G23540 | 27.673 | 318 | 185 | 14 | 2 | 295 | 75 | 371 | 7.43e-18 | 83.6 |
MS.gene068735.t1 | AT1G71691 | 27.843 | 255 | 149 | 7 | 3 | 244 | 79 | 311 | 1.23e-17 | 82.0 |
MS.gene068735.t1 | AT1G75920 | 28.617 | 311 | 176 | 14 | 3 | 294 | 25 | 308 | 1.61e-17 | 82.0 |
MS.gene068735.t1 | AT3G50400 | 28.750 | 320 | 180 | 15 | 2 | 295 | 61 | 358 | 1.69e-17 | 82.4 |
MS.gene068735.t1 | AT1G75920 | 28.617 | 311 | 176 | 14 | 3 | 294 | 53 | 336 | 1.77e-17 | 82.0 |
MS.gene068735.t1 | AT2G04570 | 24.675 | 308 | 200 | 10 | 6 | 297 | 55 | 346 | 1.83e-17 | 82.0 |
MS.gene068735.t1 | AT1G06990 | 27.244 | 312 | 188 | 12 | 6 | 297 | 64 | 356 | 1.94e-17 | 82.0 |
MS.gene068735.t1 | AT5G03810 | 25.806 | 310 | 187 | 12 | 6 | 293 | 57 | 345 | 2.94e-17 | 81.6 |
MS.gene068735.t1 | AT5G22810 | 25.081 | 307 | 195 | 10 | 6 | 293 | 61 | 351 | 3.89e-17 | 81.3 |
MS.gene068735.t1 | AT5G55050 | 28.188 | 298 | 173 | 14 | 13 | 288 | 75 | 353 | 5.15e-17 | 81.3 |
MS.gene068735.t1 | AT1G75910 | 25.658 | 304 | 195 | 9 | 3 | 294 | 52 | 336 | 8.53e-17 | 80.1 |
MS.gene068735.t1 | AT1G20130 | 25.949 | 316 | 187 | 13 | 6 | 294 | 231 | 526 | 8.61e-17 | 81.3 |
MS.gene068735.t1 | AT5G15720 | 27.237 | 257 | 154 | 11 | 3 | 244 | 54 | 292 | 1.04e-16 | 79.7 |
MS.gene068735.t1 | AT1G59406 | 27.124 | 306 | 186 | 11 | 6 | 294 | 57 | 342 | 1.23e-16 | 79.7 |
MS.gene068735.t1 | AT1G59030 | 27.124 | 306 | 186 | 11 | 6 | 294 | 57 | 342 | 1.23e-16 | 79.7 |
MS.gene068735.t1 | AT1G58725 | 27.124 | 306 | 186 | 11 | 6 | 294 | 57 | 342 | 1.23e-16 | 79.7 |
MS.gene068735.t1 | AT1G20130 | 26.266 | 316 | 186 | 13 | 6 | 294 | 211 | 506 | 1.28e-16 | 80.5 |
MS.gene068735.t1 | AT4G26790 | 24.601 | 313 | 196 | 12 | 6 | 298 | 56 | 348 | 1.83e-16 | 79.3 |
MS.gene068735.t1 | AT4G26790 | 24.601 | 313 | 196 | 12 | 6 | 298 | 56 | 348 | 1.83e-16 | 79.3 |
MS.gene068735.t1 | AT1G58520 | 26.246 | 301 | 188 | 9 | 6 | 294 | 57 | 335 | 2.19e-16 | 79.0 |
MS.gene068735.t1 | AT1G58525 | 26.246 | 301 | 188 | 9 | 6 | 294 | 57 | 335 | 2.19e-16 | 79.0 |
MS.gene068735.t1 | AT3G16370 | 25.240 | 313 | 195 | 12 | 6 | 298 | 57 | 350 | 2.27e-16 | 79.0 |
MS.gene068735.t1 | AT5G41890 | 26.959 | 319 | 187 | 12 | 6 | 295 | 58 | 359 | 6.14e-16 | 77.8 |
MS.gene068735.t1 | AT2G31540 | 26.733 | 303 | 183 | 10 | 16 | 297 | 74 | 358 | 7.23e-16 | 77.8 |
MS.gene068735.t1 | AT1G53940 | 27.707 | 314 | 189 | 11 | 3 | 296 | 65 | 360 | 1.02e-15 | 77.4 |
MS.gene068735.t1 | AT2G03980 | 27.852 | 298 | 185 | 11 | 6 | 289 | 70 | 351 | 2.67e-15 | 75.9 |
MS.gene068735.t1 | AT2G03980 | 27.852 | 298 | 185 | 11 | 6 | 289 | 70 | 351 | 2.67e-15 | 75.9 |
MS.gene068735.t1 | AT2G03980 | 27.852 | 298 | 185 | 11 | 6 | 289 | 70 | 351 | 2.67e-15 | 75.9 |
MS.gene068735.t1 | AT2G03980 | 27.852 | 298 | 185 | 11 | 6 | 289 | 70 | 351 | 2.67e-15 | 75.9 |
MS.gene068735.t1 | AT3G04290 | 24.837 | 306 | 198 | 10 | 6 | 295 | 56 | 345 | 3.08e-15 | 75.9 |
MS.gene068735.t1 | AT1G29660 | 25.249 | 301 | 192 | 13 | 6 | 290 | 59 | 342 | 3.68e-15 | 75.5 |
MS.gene068735.t1 | AT2G30310 | 26.645 | 304 | 186 | 11 | 5 | 289 | 61 | 346 | 5.07e-15 | 75.1 |
MS.gene068735.t1 | AT5G40990 | 26.349 | 315 | 192 | 11 | 3 | 296 | 63 | 358 | 5.42e-15 | 75.1 |
MS.gene068735.t1 | AT5G15720 | 26.148 | 283 | 168 | 13 | 29 | 289 | 48 | 311 | 7.03e-15 | 74.3 |
MS.gene068735.t1 | AT2G30220 | 26.797 | 306 | 187 | 10 | 3 | 289 | 58 | 345 | 7.29e-15 | 74.7 |
MS.gene068735.t1 | AT1G33811 | 25.817 | 306 | 196 | 14 | 3 | 290 | 58 | 350 | 1.40e-14 | 73.9 |
MS.gene068735.t1 | AT1G54020 | 25.079 | 315 | 188 | 14 | 6 | 306 | 61 | 341 | 2.10e-14 | 73.6 |
MS.gene068735.t1 | AT1G71691 | 25.517 | 290 | 172 | 10 | 26 | 295 | 1 | 266 | 3.66e-14 | 72.0 |
MS.gene068735.t1 | AT1G75920 | 27.607 | 326 | 175 | 15 | 3 | 294 | 48 | 346 | 3.76e-14 | 72.4 |
MS.gene068735.t1 | AT2G19060 | 26.349 | 315 | 182 | 15 | 6 | 300 | 57 | 341 | 1.69e-13 | 70.5 |
MS.gene068735.t1 | AT5G45670 | 24.013 | 304 | 199 | 10 | 3 | 290 | 53 | 340 | 2.26e-13 | 70.5 |
MS.gene068735.t1 | AT1G75930 | 25.413 | 303 | 194 | 12 | 3 | 293 | 53 | 335 | 3.11e-13 | 69.7 |
MS.gene068735.t1 | AT1G53990 | 23.839 | 323 | 198 | 13 | 3 | 305 | 61 | 355 | 9.01e-13 | 68.6 |
MS.gene068735.t1 | AT5G37690 | 24.138 | 290 | 190 | 10 | 16 | 292 | 66 | 338 | 1.24e-12 | 68.2 |
MS.gene068735.t1 | AT4G18970 | 23.151 | 311 | 193 | 11 | 3 | 290 | 52 | 339 | 1.52e-12 | 67.8 |
MS.gene068735.t1 | AT2G24560 | 25.081 | 307 | 193 | 9 | 5 | 292 | 61 | 349 | 1.64e-12 | 67.8 |
MS.gene068735.t1 | AT4G18970 | 23.151 | 311 | 193 | 11 | 3 | 290 | 52 | 339 | 1.83e-12 | 67.8 |
MS.gene068735.t1 | AT3G14210 | 26.019 | 319 | 186 | 15 | 6 | 306 | 65 | 351 | 3.67e-12 | 67.0 |
MS.gene068735.t1 | AT5G03600 | 23.333 | 300 | 185 | 10 | 5 | 288 | 37 | 307 | 1.57e-11 | 64.7 |
MS.gene068735.t1 | AT2G19010 | 26.282 | 312 | 184 | 13 | 6 | 300 | 57 | 339 | 1.71e-11 | 64.7 |
MS.gene068735.t1 | AT5G03600 | 23.333 | 300 | 185 | 10 | 5 | 288 | 72 | 342 | 1.98e-11 | 64.3 |
MS.gene068735.t1 | AT2G19010 | 26.282 | 312 | 184 | 13 | 6 | 300 | 87 | 369 | 3.06e-11 | 63.9 |
Find 57 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCTTCAAAACGTATAAAT+TGG | 0.154270 | 2.3:+18848788 | MS.gene068735:CDS |
AAAGAAGACTATGATGAATT+TGG | 0.177918 | 2.3:+18848406 | MS.gene068735:CDS |
GTCTTTGCTTTCATTCTTAA+AGG | 0.198948 | 2.3:-18847742 | None:intergenic |
AATTTAGTCGAGTACTTTAA+TGG | 0.225097 | 2.3:+18848448 | MS.gene068735:CDS |
CTCAATGAGTTATTTGTATC+TGG | 0.254916 | 2.3:-18847852 | None:intergenic |
TTAAGAGAAGGATTTGAAAA+TGG | 0.264149 | 2.3:-18848871 | None:intergenic |
TCGAGAAATAGTTCCCATTA+TGG | 0.295040 | 2.3:+18848134 | MS.gene068735:CDS |
AGTAATGGCTTCAACCATAA+TGG | 0.303127 | 2.3:-18848148 | None:intergenic |
ATGCCTAACCCTATTCCTTA+TGG | 0.311052 | 2.3:+18847364 | MS.gene068735:CDS |
TTGTTTATAGTCGGAGAAAT+TGG | 0.338930 | 2.3:+18848063 | MS.gene068735:CDS |
TAAGTAGAACCATAAGGAAT+AGG | 0.340666 | 2.3:-18847373 | None:intergenic |
TCAATTGTAGCCGAGGCATA+TGG | 0.349088 | 2.3:+18847702 | MS.gene068735:intron |
TATCAAACACCACAACAATA+TGG | 0.370274 | 2.3:+18848562 | MS.gene068735:CDS |
TTTCCAATGGGGTGCAGTGC+TGG | 0.370791 | 2.3:+18848355 | MS.gene068735:CDS |
AAGTATATTATCTTAACTTC+AGG | 0.374656 | 2.3:-18848511 | None:intergenic |
ATTTAGTCGAGTACTTTAAT+GGG | 0.379933 | 2.3:+18848449 | MS.gene068735:CDS |
AAGAAGACTATGATGAATTT+GGG | 0.390648 | 2.3:+18848407 | MS.gene068735:CDS |
ACTTACTTTAAACATCCTTC+AGG | 0.400463 | 2.3:+18847391 | MS.gene068735:CDS |
TGCAATAAAACATACATTTG+TGG | 0.419456 | 2.3:-18848175 | None:intergenic |
GCTGTAGAGCTAGTGGTGCC+TGG | 0.423142 | 2.3:+18848328 | MS.gene068735:CDS |
CATTGAGCATTCAACTTGGA+TGG | 0.434862 | 2.3:+18847868 | MS.gene068735:CDS |
GCTTATAAGCTAATAGCAAA+AGG | 0.438238 | 2.3:+18848835 | MS.gene068735:CDS |
GTAATGGCTTCAACCATAAT+GGG | 0.442785 | 2.3:-18848147 | None:intergenic |
TACATTTGTGGTGTTAGTAA+TGG | 0.442995 | 2.3:-18848163 | None:intergenic |
AAGTAGAACCATAAGGAATA+GGG | 0.452342 | 2.3:-18847372 | None:intergenic |
CAATTGTAGCCGAGGCATAT+GGG | 0.454691 | 2.3:+18847703 | MS.gene068735:intron |
TCCTTCAAAACGTATAAATT+GGG | 0.456516 | 2.3:+18848789 | MS.gene068735:CDS |
AAAAGAGGGGATTTAAGAGA+AGG | 0.458433 | 2.3:-18848883 | None:intergenic |
TTGCTTTCATTCTTAAAGGC+AGG | 0.481404 | 2.3:-18847738 | None:intergenic |
GAACCATAAGGAATAGGGTT+AGG | 0.482948 | 2.3:-18847367 | None:intergenic |
CCTTCAGGACGTATGTCAAA+TGG | 0.484377 | 2.3:+18847406 | MS.gene068735:CDS |
GAGTTATTTGTATCTGGAAG+AGG | 0.491124 | 2.3:-18847846 | None:intergenic |
TGGTGTTTGATATAAACGTT+TGG | 0.492868 | 2.3:-18848551 | None:intergenic |
AAGAAATCATTGTTTATAGT+CGG | 0.497115 | 2.3:+18848054 | MS.gene068735:CDS |
AACTCATTGAGCATTCAACT+TGG | 0.498581 | 2.3:+18847864 | MS.gene068735:CDS |
CTCCTCTGTAAAAGCAAAGA+AGG | 0.500581 | 2.3:+18847912 | MS.gene068735:CDS |
AGTATATTATCTTAACTTCA+GGG | 0.506555 | 2.3:-18848510 | None:intergenic |
AAAGTATGTTGTGGAGGATG+TGG | 0.512867 | 2.3:+18848739 | MS.gene068735:CDS |
CTTATAAGCTAATAGCAAAA+GGG | 0.513103 | 2.3:+18848836 | MS.gene068735:CDS |
CTGTAGAGCTAGTGGTGCCT+GGG | 0.525536 | 2.3:+18848329 | MS.gene068735:CDS |
GTTCCAGCACTGCACCCCAT+TGG | 0.540064 | 2.3:-18848358 | None:intergenic |
ATAGCAAAAGGGCTAGTTGA+GGG | 0.540275 | 2.3:+18848847 | MS.gene068735:CDS |
TTAAAGTAAGTAGAACCATA+AGG | 0.541599 | 2.3:-18847379 | None:intergenic |
TGCTAGGTGCTAATCGAAGA+AGG | 0.549087 | 2.3:+18848304 | MS.gene068735:intron |
TTTATAGTCGGAGAAATTGG+TGG | 0.554464 | 2.3:+18848066 | MS.gene068735:CDS |
CACCCCATTGGAAAATTCCC+AGG | 0.567947 | 2.3:-18848346 | None:intergenic |
TTATAGTCGGAGAAATTGGT+GGG | 0.580884 | 2.3:+18848067 | MS.gene068735:CDS |
AGAAGGAGCTGTAGAGCTAG+TGG | 0.584696 | 2.3:+18848321 | MS.gene068735:CDS |
AAAAGGCAACCCATATGCCT+CGG | 0.587551 | 2.3:-18847712 | None:intergenic |
CCATTTGACATACGTCCTGA+AGG | 0.596686 | 2.3:-18847406 | None:intergenic |
TACCGCTCACCATATTGTTG+TGG | 0.624718 | 2.3:-18848571 | None:intergenic |
TAAGGAATAGGGTTAGGCAT+AGG | 0.635829 | 2.3:-18847361 | None:intergenic |
TCAAAACGTATAAATTGGGA+CGG | 0.645170 | 2.3:+18848793 | MS.gene068735:CDS |
AATAGCAAAAGGGCTAGTTG+AGG | 0.650233 | 2.3:+18848846 | MS.gene068735:CDS |
TAAGCTGCTTCAGTAAAGTG+AGG | 0.670311 | 2.3:-18848817 | None:intergenic |
CAGTGCTGGAACATTGACAT+CGG | 0.723676 | 2.3:+18848369 | MS.gene068735:CDS |
ATACTCAACATTGAGTACAG+TGG | 0.728519 | 2.3:-18847805 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATATATAATTATATATTT+TGG | + | chr2.3:18848595-18848614 | MS.gene068735:intron | 0.0% |
!! | AAATAAATAATAATGTAATG+AGG | + | chr2.3:18847580-18847599 | MS.gene068735:intron | 10.0% |
!! | TTAATCTAAATATCAAGTTA+AGG | - | chr2.3:18847560-18847579 | None:intergenic | 15.0% |
!!! | CATGAATTTTTTTTTCAATA+TGG | + | chr2.3:18847985-18848004 | MS.gene068735:intron | 15.0% |
!!! | TAAAAATCTATTTTCTTTTG+TGG | + | chr2.3:18847619-18847638 | MS.gene068735:intron | 15.0% |
!! | AAGAAATCATTGTTTATAGT+CGG | + | chr2.3:18848054-18848073 | MS.gene068735:CDS | 20.0% |
!! | AAGTATATTATCTTAACTTC+AGG | - | chr2.3:18848514-18848533 | None:intergenic | 20.0% |
!! | AGTATATTATCTTAACTTCA+GGG | - | chr2.3:18848513-18848532 | None:intergenic | 20.0% |
!! | ATCAATCAAATTAATTATGC+AGG | + | chr2.3:18848694-18848713 | MS.gene068735:intron | 20.0% |
!! | CATGCATAAATGAAATAAAA+AGG | - | chr2.3:18848666-18848685 | None:intergenic | 20.0% |
!! | GAAATAAAAAGGAATAATTG+TGG | - | chr2.3:18848655-18848674 | None:intergenic | 20.0% |
!! | TACATACAATCTACAAAATA+TGG | + | chr2.3:18847527-18847546 | MS.gene068735:intron | 20.0% |
!! | TTGAGTATTATGTCAAAAAT+GGG | + | chr2.3:18847820-18847839 | MS.gene068735:CDS | 20.0% |
!!! | GTTTTATTGCAATTAAGTTT+TGG | + | chr2.3:18848187-18848206 | MS.gene068735:intron | 20.0% |
!!! | TTGTTTCTTATTCTTATCAT+TGG | - | chr2.3:18847496-18847515 | None:intergenic | 20.0% |
! | AAAAAAAATTCCACTGCTTA+TGG | - | chr2.3:18847943-18847962 | None:intergenic | 25.0% |
! | AAAGAAGACTATGATGAATT+TGG | + | chr2.3:18848406-18848425 | MS.gene068735:CDS | 25.0% |
! | AAAGACCATGATATCAAAAA+AGG | + | chr2.3:18847759-18847778 | MS.gene068735:CDS | 25.0% |
! | AAGAAGACTATGATGAATTT+GGG | + | chr2.3:18848407-18848426 | MS.gene068735:CDS | 25.0% |
! | AATTTAGTCGAGTACTTTAA+TGG | + | chr2.3:18848448-18848467 | MS.gene068735:CDS | 25.0% |
! | ATCCTTCAAAACGTATAAAT+TGG | + | chr2.3:18848788-18848807 | MS.gene068735:CDS | 25.0% |
! | ATTTAGTCGAGTACTTTAAT+GGG | + | chr2.3:18848449-18848468 | MS.gene068735:CDS | 25.0% |
! | CAAAGAGAAATATCATTGAT+TGG | + | chr2.3:18848239-18848258 | MS.gene068735:intron | 25.0% |
! | CTTATAAGCTAATAGCAAAA+GGG | + | chr2.3:18848836-18848855 | MS.gene068735:CDS | 25.0% |
! | GTTGAGTATTATGTCAAAAA+TGG | + | chr2.3:18847819-18847838 | MS.gene068735:CDS | 25.0% |
! | TCCTTCAAAACGTATAAATT+GGG | + | chr2.3:18848789-18848808 | MS.gene068735:CDS | 25.0% |
! | TGCAATAAAACATACATTTG+TGG | - | chr2.3:18848178-18848197 | None:intergenic | 25.0% |
! | TTAAAGTAAGTAGAACCATA+AGG | - | chr2.3:18847382-18847401 | None:intergenic | 25.0% |
! | TTAAGAGAAGGATTTGAAAA+TGG | - | chr2.3:18848874-18848893 | None:intergenic | 25.0% |
!!! | TAATTATGCAGGTTTTGATA+AGG | + | chr2.3:18848705-18848724 | MS.gene068735:intron | 25.0% |
!!! | TTACTCCTTTTTTGATATCA+TGG | - | chr2.3:18847767-18847786 | None:intergenic | 25.0% |
AAGTAGAACCATAAGGAATA+GGG | - | chr2.3:18847375-18847394 | None:intergenic | 30.0% | |
ACTTACTTTAAACATCCTTC+AGG | + | chr2.3:18847391-18847410 | MS.gene068735:CDS | 30.0% | |
CTCAATGAGTTATTTGTATC+TGG | - | chr2.3:18847855-18847874 | None:intergenic | 30.0% | |
GCTTATAAGCTAATAGCAAA+AGG | + | chr2.3:18848835-18848854 | MS.gene068735:CDS | 30.0% | |
GTCTTTGCTTTCATTCTTAA+AGG | - | chr2.3:18847745-18847764 | None:intergenic | 30.0% | |
TAAGTAGAACCATAAGGAAT+AGG | - | chr2.3:18847376-18847395 | None:intergenic | 30.0% | |
TATCAAACACCACAACAATA+TGG | + | chr2.3:18848562-18848581 | MS.gene068735:CDS | 30.0% | |
TCAAAACGTATAAATTGGGA+CGG | + | chr2.3:18848793-18848812 | MS.gene068735:CDS | 30.0% | |
TGGTGTTTGATATAAACGTT+TGG | - | chr2.3:18848554-18848573 | None:intergenic | 30.0% | |
TTGTTTATAGTCGGAGAAAT+TGG | + | chr2.3:18848063-18848082 | MS.gene068735:CDS | 30.0% | |
TTTCATTTATGCATGCTTAC+TGG | + | chr2.3:18848671-18848690 | MS.gene068735:intron | 30.0% | |
! | ATTTTCAAAGTATGTTGTGG+AGG | + | chr2.3:18848733-18848752 | MS.gene068735:CDS | 30.0% |
! | CGACTGATCATAGATTTTAT+TGG | + | chr2.3:18847430-18847449 | MS.gene068735:CDS | 30.0% |
! | TACATTTGTGGTGTTAGTAA+TGG | - | chr2.3:18848166-18848185 | None:intergenic | 30.0% |
! | TCCCAATTTATACGTTTTGA+AGG | - | chr2.3:18848793-18848812 | None:intergenic | 30.0% |
!! | CTAAGCTATTTTGAAAAGAG+GGG | - | chr2.3:18848899-18848918 | None:intergenic | 30.0% |
!! | GCTATTTTCAAAGTATGTTG+TGG | + | chr2.3:18848730-18848749 | MS.gene068735:CDS | 30.0% |
!!! | TGATTTTGTTTCTATGTGCT+AGG | + | chr2.3:18848288-18848307 | MS.gene068735:intron | 30.0% |
AAAAGAGGGGATTTAAGAGA+AGG | - | chr2.3:18848886-18848905 | None:intergenic | 35.0% | |
AACTCATTGAGCATTCAACT+TGG | + | chr2.3:18847864-18847883 | MS.gene068735:CDS | 35.0% | |
AGTAATGGCTTCAACCATAA+TGG | - | chr2.3:18848151-18848170 | None:intergenic | 35.0% | |
ATACTCAACATTGAGTACAG+TGG | - | chr2.3:18847808-18847827 | None:intergenic | 35.0% | |
GAGTTATTTGTATCTGGAAG+AGG | - | chr2.3:18847849-18847868 | None:intergenic | 35.0% | |
GTAATGGCTTCAACCATAAT+GGG | - | chr2.3:18848150-18848169 | None:intergenic | 35.0% | |
TCGAGAAATAGTTCCCATTA+TGG | + | chr2.3:18848134-18848153 | MS.gene068735:CDS | 35.0% | |
TTATAGTCGGAGAAATTGGT+GGG | + | chr2.3:18848067-18848086 | MS.gene068735:CDS | 35.0% | |
TTCTTAAAGGCAGGCAAAAA+AGG | - | chr2.3:18847732-18847751 | None:intergenic | 35.0% | |
TTGCTTTCATTCTTAAAGGC+AGG | - | chr2.3:18847741-18847760 | None:intergenic | 35.0% | |
TTTATAGTCGGAGAAATTGG+TGG | + | chr2.3:18848066-18848085 | MS.gene068735:CDS | 35.0% | |
! | CAATGTCACATATTTTCACG+CGG | - | chr2.3:18848270-18848289 | None:intergenic | 35.0% |
! | GGAGTAAATTTTGCATTTGC+TGG | + | chr2.3:18847780-18847799 | MS.gene068735:CDS | 35.0% |
!! | AACCTTCTTTGCTTTTACAG+AGG | - | chr2.3:18847917-18847936 | None:intergenic | 35.0% |
!! | TTCTTTGCTTTTACAGAGGA+GGG | - | chr2.3:18847913-18847932 | None:intergenic | 35.0% |
AAAGTATGTTGTGGAGGATG+TGG | + | chr2.3:18848739-18848758 | MS.gene068735:CDS | 40.0% | |
ATGCCTAACCCTATTCCTTA+TGG | + | chr2.3:18847364-18847383 | MS.gene068735:CDS | 40.0% | |
CATTGAGCATTCAACTTGGA+TGG | + | chr2.3:18847868-18847887 | MS.gene068735:CDS | 40.0% | |
CTCCTCTGTAAAAGCAAAGA+AGG | + | chr2.3:18847912-18847931 | MS.gene068735:CDS | 40.0% | |
GAACCATAAGGAATAGGGTT+AGG | - | chr2.3:18847370-18847389 | None:intergenic | 40.0% | |
GATCATTTCAATTGTAGCCG+AGG | + | chr2.3:18847695-18847714 | MS.gene068735:intron | 40.0% | |
TAAGCTGCTTCAGTAAAGTG+AGG | - | chr2.3:18848820-18848839 | None:intergenic | 40.0% | |
! | GAAGGTTTTACCATAAGCAG+TGG | + | chr2.3:18847930-18847949 | MS.gene068735:intron | 40.0% |
!! | AATAGCAAAAGGGCTAGTTG+AGG | + | chr2.3:18848846-18848865 | MS.gene068735:CDS | 40.0% |
!! | ATAGCAAAAGGGCTAGTTGA+GGG | + | chr2.3:18848847-18848866 | MS.gene068735:CDS | 40.0% |
!! | CTTCTTTGCTTTTACAGAGG+AGG | - | chr2.3:18847914-18847933 | None:intergenic | 40.0% |
!! | TCTTTGCTTTTACAGAGGAG+GGG | - | chr2.3:18847912-18847931 | None:intergenic | 40.0% |
AAAAGGCAACCCATATGCCT+CGG | - | chr2.3:18847715-18847734 | None:intergenic | 45.0% | |
CAATTGTAGCCGAGGCATAT+GGG | + | chr2.3:18847703-18847722 | MS.gene068735:intron | 45.0% | |
CACCACAACAATATGGTGAG+CGG | + | chr2.3:18848569-18848588 | MS.gene068735:intron | 45.0% | |
CCATTTGACATACGTCCTGA+AGG | - | chr2.3:18847409-18847428 | None:intergenic | 45.0% | |
CCTTCAGGACGTATGTCAAA+TGG | + | chr2.3:18847406-18847425 | MS.gene068735:CDS | 45.0% | |
TACCGCTCACCATATTGTTG+TGG | - | chr2.3:18848574-18848593 | None:intergenic | 45.0% | |
TCAATTGTAGCCGAGGCATA+TGG | + | chr2.3:18847702-18847721 | MS.gene068735:intron | 45.0% | |
TGCTAGGTGCTAATCGAAGA+AGG | + | chr2.3:18848304-18848323 | MS.gene068735:intron | 45.0% | |
! | CAGTGCTGGAACATTGACAT+CGG | + | chr2.3:18848369-18848388 | MS.gene068735:CDS | 45.0% |
! | GTGCCTGGGAATTTTCCAAT+GGG | + | chr2.3:18848343-18848362 | MS.gene068735:CDS | 45.0% |
! | TGCCTGGGAATTTTCCAATG+GGG | + | chr2.3:18848344-18848363 | MS.gene068735:CDS | 45.0% |
AGAAGGAGCTGTAGAGCTAG+TGG | + | chr2.3:18848321-18848340 | MS.gene068735:CDS | 50.0% | |
CACCCCATTGGAAAATTCCC+AGG | - | chr2.3:18848349-18848368 | None:intergenic | 50.0% | |
! | GGTGCCTGGGAATTTTCCAA+TGG | + | chr2.3:18848342-18848361 | MS.gene068735:CDS | 50.0% |
CTGTAGAGCTAGTGGTGCCT+GGG | + | chr2.3:18848329-18848348 | MS.gene068735:CDS | 55.0% | |
TTTCCAATGGGGTGCAGTGC+TGG | + | chr2.3:18848355-18848374 | MS.gene068735:CDS | 55.0% | |
GCTGTAGAGCTAGTGGTGCC+TGG | + | chr2.3:18848328-18848347 | MS.gene068735:CDS | 60.0% | |
GTTCCAGCACTGCACCCCAT+TGG | - | chr2.3:18848361-18848380 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 18847364 | 18848918 | 18847364 | ID=MS.gene068735 |
chr2.3 | mRNA | 18847364 | 18848918 | 18847364 | ID=MS.gene068735.t1;Parent=MS.gene068735 |
chr2.3 | exon | 18847364 | 18847451 | 18847364 | ID=MS.gene068735.t1.exon1;Parent=MS.gene068735.t1 |
chr2.3 | CDS | 18847364 | 18847451 | 18847364 | ID=cds.MS.gene068735.t1;Parent=MS.gene068735.t1 |
chr2.3 | exon | 18847712 | 18847933 | 18847712 | ID=MS.gene068735.t1.exon2;Parent=MS.gene068735.t1 |
chr2.3 | CDS | 18847712 | 18847933 | 18847712 | ID=cds.MS.gene068735.t1;Parent=MS.gene068735.t1 |
chr2.3 | exon | 18848037 | 18848182 | 18848037 | ID=MS.gene068735.t1.exon3;Parent=MS.gene068735.t1 |
chr2.3 | CDS | 18848037 | 18848182 | 18848037 | ID=cds.MS.gene068735.t1;Parent=MS.gene068735.t1 |
chr2.3 | exon | 18848310 | 18848583 | 18848310 | ID=MS.gene068735.t1.exon4;Parent=MS.gene068735.t1 |
chr2.3 | CDS | 18848310 | 18848583 | 18848310 | ID=cds.MS.gene068735.t1;Parent=MS.gene068735.t1 |
chr2.3 | exon | 18848716 | 18848918 | 18848716 | ID=MS.gene068735.t1.exon5;Parent=MS.gene068735.t1 |
chr2.3 | CDS | 18848716 | 18848918 | 18848716 | ID=cds.MS.gene068735.t1;Parent=MS.gene068735.t1 |
Gene Sequence |
Protein sequence |