AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069128

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069128.t1 MTR_5g031860 89.595 173 18 0 1 173 302 474 1.53e-112 328
MS.gene069128.t1 MTR_5g031840 89.017 173 19 0 1 173 294 466 2.28e-112 327
MS.gene069128.t1 MTR_5g031830 87.861 173 21 0 1 173 303 475 1.33e-111 326
MS.gene069128.t1 MTR_6g014300 44.643 168 91 2 1 166 296 463 2.84e-48 162
MS.gene069128.t1 MTR_0036s0220 48.555 173 81 5 1 168 308 477 5.42e-47 159
MS.gene069128.t1 MTR_5g464810 49.133 173 80 5 1 168 308 477 6.73e-47 159
MS.gene069128.t1 MTR_5g064240 49.133 173 80 5 1 168 308 477 6.73e-47 159
MS.gene069128.t1 MTR_7g011470 43.452 168 93 2 1 166 296 463 1.30e-46 158
MS.gene069128.t1 MTR_7g011470 43.452 168 93 2 1 166 292 459 1.55e-46 158
MS.gene069128.t1 MTR_5g464760 48.256 172 83 5 1 168 310 479 3.04e-46 157
MS.gene069128.t1 MTR_6g014270 43.529 170 94 2 1 168 309 478 6.35e-46 157
MS.gene069128.t1 MTR_6g014200 43.529 170 94 2 1 168 307 476 6.81e-46 156
MS.gene069128.t1 MTR_6g014190 41.765 170 97 2 1 168 117 286 9.26e-46 152
MS.gene069128.t1 MTR_6g014150 43.529 170 94 2 1 168 307 476 1.45e-45 155
MS.gene069128.t1 MTR_6g013990 42.857 175 88 3 1 168 308 477 4.98e-45 154
MS.gene069128.t1 MTR_0288s0020 42.941 170 95 2 1 168 291 460 5.61e-45 154
MS.gene069128.t1 MTR_6g014310 43.114 167 93 2 1 165 311 477 5.67e-45 154
MS.gene069128.t1 MTR_0477s0010 41.765 170 97 2 1 168 147 316 9.32e-45 150
MS.gene069128.t1 MTR_6g014050 41.176 170 98 2 1 168 311 480 2.06e-44 153
MS.gene069128.t1 MTR_6g013450 42.197 173 88 3 1 166 311 478 6.23e-44 151
MS.gene069128.t1 MTR_6g014187 41.714 175 90 3 1 168 310 479 7.24e-44 151
MS.gene069128.t1 MTR_6g013920 43.787 169 91 3 1 166 309 476 1.02e-43 151
MS.gene069128.t1 MTR_6g013440 40.588 170 99 2 1 168 311 480 2.47e-43 150
MS.gene069128.t1 MTR_6g013960 42.442 172 93 3 1 168 310 479 2.70e-43 150
MS.gene069128.t1 MTR_8g007585 40.588 170 99 2 1 168 222 391 2.74e-43 148
MS.gene069128.t1 MTR_6g013900 41.667 168 96 2 1 166 309 476 4.17e-43 149
MS.gene069128.t1 MTR_6g014220 41.176 170 98 2 1 168 308 477 4.96e-43 149
MS.gene069128.t1 MTR_6g014290 40.476 168 98 2 1 166 308 475 7.14e-43 149
MS.gene069128.t1 MTR_8g059425 41.765 170 97 2 1 168 308 477 1.25e-42 148
MS.gene069128.t1 MTR_6g014250 40.000 170 100 2 1 168 308 477 2.35e-42 147
MS.gene069128.t1 MTR_6g011340 42.353 170 96 2 1 168 310 479 4.20e-42 147
MS.gene069128.t1 MTR_4g094220 43.353 173 85 3 1 165 308 475 5.69e-42 146
MS.gene069128.t1 MTR_5g058320 40.571 175 92 3 1 168 295 464 7.42e-42 145
MS.gene069128.t1 MTR_3g069710 42.529 174 96 2 1 170 280 453 8.38e-42 145
MS.gene069128.t1 MTR_3g008010 39.881 168 99 2 1 166 308 475 1.68e-41 145
MS.gene069128.t1 MTR_6g014040 41.765 170 97 2 1 168 311 480 2.77e-41 144
MS.gene069128.t1 MTR_8g043470 40.719 167 97 2 1 165 208 374 3.40e-41 142
MS.gene069128.t1 MTR_6g014170 40.588 170 99 2 1 168 292 461 7.37e-41 143
MS.gene069128.t1 MTR_2g008210 43.353 173 93 3 1 168 304 476 1.09e-40 143
MS.gene069128.t1 MTR_0891s0010 39.645 169 99 2 1 166 119 287 3.46e-40 137
MS.gene069128.t1 MTR_6g014020 40.000 170 100 2 1 168 310 479 5.12e-40 141
MS.gene069128.t1 MTR_6g014240 40.588 170 99 2 1 168 277 446 6.19e-40 140
MS.gene069128.t1 MTR_4g064987 42.442 172 92 4 4 170 276 445 7.30e-40 140
MS.gene069128.t1 MTR_4g064987 42.442 172 92 4 4 170 282 451 9.54e-40 140
MS.gene069128.t1 MTR_2086s0010 36.842 171 105 2 1 168 1 171 1.80e-39 132
MS.gene069128.t1 MTR_1996s0010 36.842 171 105 2 1 168 1 171 1.80e-39 132
MS.gene069128.t1 MTR_3g069690 40.571 175 99 2 1 170 277 451 1.91e-39 139
MS.gene069128.t1 MTR_5g066390 40.625 160 85 4 15 168 59 214 9.55e-39 132
MS.gene069128.t1 MTR_3g479520 40.351 171 99 2 1 168 312 482 1.53e-38 137
MS.gene069128.t1 MTR_3g479610 38.012 171 103 2 1 168 142 312 1.08e-37 132
MS.gene069128.t1 MTR_3g079480 39.053 169 100 2 1 166 318 486 5.65e-37 133
MS.gene069128.t1 MTR_3g479470 40.588 170 95 3 1 166 310 477 5.99e-37 133
MS.gene069128.t1 MTR_3g479490 38.095 168 101 2 1 165 303 470 7.14e-37 132
MS.gene069128.t1 MTR_8g088560 42.529 174 92 5 4 171 289 460 1.09e-35 129
MS.gene069128.t1 MTR_1g107380 41.111 180 96 5 1 172 299 476 4.57e-35 128
MS.gene069128.t1 MTR_7g080950 36.471 170 99 4 1 165 279 444 5.04e-33 122
MS.gene069128.t1 MTR_6g014000 40.299 134 79 1 35 167 21 154 1.12e-32 121
MS.gene069128.t1 MTR_8g066610 41.341 179 94 3 5 172 303 481 1.17e-32 121
MS.gene069128.t1 MTR_6g038230 37.647 170 97 4 1 165 286 451 1.28e-32 121
MS.gene069128.t1 MTR_4g485630 36.216 185 101 4 5 172 293 477 2.12e-32 120
MS.gene069128.t1 MTR_5g035580 39.444 180 95 4 1 172 284 457 2.91e-32 120
MS.gene069128.t1 MTR_7g080900 35.227 176 101 5 1 170 286 454 3.49e-32 120
MS.gene069128.t1 MTR_8g012730 38.202 178 88 6 1 156 119 296 6.46e-32 116
MS.gene069128.t1 MTR_1g107365 36.416 173 99 4 2 169 326 492 2.07e-31 118
MS.gene069128.t1 MTR_8g012630 38.251 183 91 6 1 161 226 408 2.63e-31 117
MS.gene069128.t1 MTR_7g102560 38.974 195 94 6 1 172 295 487 3.25e-31 117
MS.gene069128.t1 MTR_3g084530 40.323 186 88 6 1 168 292 472 4.64e-31 117
MS.gene069128.t1 MTR_5g035560 39.444 180 95 4 1 172 282 455 5.20e-31 117
MS.gene069128.t1 MTR_6g038240 38.235 170 96 4 1 165 286 451 5.74e-31 116
MS.gene069128.t1 MTR_3g049970 35.912 181 104 3 1 170 292 471 7.19e-31 116
MS.gene069128.t1 MTR_7g102450 36.559 186 96 4 5 168 286 471 8.60e-31 116
MS.gene069128.t1 MTR_7g071040 37.297 185 97 5 5 170 308 492 1.24e-30 116
MS.gene069128.t1 MTR_4g031800 35.417 192 99 5 1 170 286 474 1.37e-30 115
MS.gene069128.t1 MTR_7g013220 34.463 177 100 3 1 169 283 451 1.66e-30 115
MS.gene069128.t1 MTR_8g012650 38.547 179 88 6 1 157 282 460 1.93e-30 115
MS.gene069128.t1 MTR_1g107350 36.111 180 103 5 1 169 291 469 2.66e-30 115
MS.gene069128.t1 MTR_1g062380 37.895 190 96 5 1 168 304 493 5.85e-30 114
MS.gene069128.t1 MTR_6g014185 40.476 126 73 2 43 166 217 342 8.57e-30 112
MS.gene069128.t1 MTR_7g070610 37.634 186 96 6 5 170 303 488 8.84e-30 114
MS.gene069128.t1 MTR_8g009050 38.043 184 94 5 1 164 279 462 8.84e-30 113
MS.gene069128.t1 MTR_7g080935 34.831 178 107 4 1 173 284 457 1.41e-29 112
MS.gene069128.t1 MTR_4g485620 41.341 179 90 6 5 170 280 456 1.74e-29 112
MS.gene069128.t1 MTR_7g080940 36.000 175 100 5 1 170 284 451 1.97e-29 112
MS.gene069128.t1 MTR_7g102490 37.037 189 96 7 1 168 300 486 2.02e-29 112
MS.gene069128.t1 MTR_8g012635 37.705 183 92 6 1 161 282 464 2.02e-29 112
MS.gene069128.t1 MTR_4g108250 35.676 185 100 5 5 170 305 489 2.03e-29 112
MS.gene069128.t1 MTR_7g070810 35.938 192 100 6 1 170 287 477 2.22e-29 112
MS.gene069128.t1 MTR_7g070780 35.789 190 101 7 1 170 297 485 2.92e-29 112
MS.gene069128.t1 MTR_7g102520 37.895 190 98 4 2 171 302 491 2.92e-29 112
MS.gene069128.t1 MTR_3g084520 38.122 181 99 3 1 168 292 472 2.93e-29 112
MS.gene069128.t1 MTR_5g045970 36.041 197 100 5 1 173 303 497 3.29e-29 112
MS.gene069128.t1 MTR_6g033725 37.931 174 98 5 1 164 284 457 3.84e-29 112
MS.gene069128.t1 MTR_7g013240 33.333 171 106 3 1 167 272 438 4.59e-29 111
MS.gene069128.t1 MTR_7g070800 36.508 189 101 5 1 170 289 477 4.92e-29 111
MS.gene069128.t1 MTR_6g038220 35.294 170 101 4 1 165 285 450 6.39e-29 110
MS.gene069128.t1 MTR_8g009055 36.957 184 96 5 1 164 279 462 7.86e-29 110
MS.gene069128.t1 MTR_8g009840 36.649 191 99 6 1 170 338 527 9.61e-29 111
MS.gene069128.t1 MTR_0184s0030 36.464 181 86 5 1 157 281 456 1.10e-28 110
MS.gene069128.t1 MTR_6g038300 35.882 170 101 4 1 165 286 452 1.17e-28 110
MS.gene069128.t1 MTR_7g013200 32.749 171 107 4 1 167 272 438 1.21e-28 110
MS.gene069128.t1 MTR_4g128720 39.216 153 88 4 20 170 308 457 1.23e-28 110
MS.gene069128.t1 MTR_8g008990 36.022 186 97 5 1 164 279 464 1.24e-28 110
MS.gene069128.t1 MTR_7g070940 35.789 190 101 6 1 170 286 474 1.50e-28 110
MS.gene069128.t1 MTR_6g005600 35.870 184 93 5 4 164 282 463 1.51e-28 110
MS.gene069128.t1 MTR_8g083280 36.932 176 97 4 1 168 292 461 1.60e-28 110
MS.gene069128.t1 MTR_6g033625 38.068 176 99 4 1 166 287 462 1.77e-28 110
MS.gene069128.t1 MTR_1g107360 34.682 173 101 3 1 166 292 459 1.79e-28 110
MS.gene069128.t1 MTR_3g084540 37.634 186 102 4 1 172 292 477 2.06e-28 109
MS.gene069128.t1 MTR_8g083290 38.554 166 93 4 8 165 296 460 2.07e-28 109
MS.gene069128.t1 MTR_4g094920 34.659 176 104 4 1 165 301 476 2.19e-28 110
MS.gene069128.t1 MTR_8g077590 38.122 181 95 6 1 164 282 462 2.33e-28 109
MS.gene069128.t1 MTR_4g024020 35.233 193 95 5 1 168 300 487 2.37e-28 109
MS.gene069128.t1 MTR_8g064870 33.514 185 107 5 1 170 292 475 2.69e-28 109
MS.gene069128.t1 MTR_1g107375 31.609 174 109 3 1 169 286 454 3.55e-28 108
MS.gene069128.t1 MTR_0536s0020 35.079 191 99 6 4 169 290 480 3.72e-28 109
MS.gene069128.t1 MTR_6g038200 33.898 177 94 4 1 165 286 451 4.19e-28 108
MS.gene069128.t1 MTR_7g102550 37.705 183 93 4 5 166 301 483 4.64e-28 108
MS.gene069128.t1 MTR_4g117960 34.536 194 102 6 1 169 288 481 5.27e-28 108
MS.gene069128.t1 MTR_7g013260 33.333 171 106 3 1 167 273 439 5.59e-28 108
MS.gene069128.t1 MTR_8g012745 37.288 177 90 7 1 157 282 457 5.91e-28 108
MS.gene069128.t1 MTR_7g070740 36.216 185 99 5 5 170 301 485 6.33e-28 108
MS.gene069128.t1 MTR_8g090095 36.364 187 100 6 1 168 293 479 6.51e-28 108
MS.gene069128.t1 MTR_5g040030 32.973 185 105 5 5 170 305 489 7.06e-28 108
MS.gene069128.t1 MTR_7g117405 35.714 182 98 4 5 168 300 480 7.30e-28 108
MS.gene069128.t1 MTR_1g019510 34.973 183 100 5 1 164 277 459 8.66e-28 108
MS.gene069128.t1 MTR_6g033615 36.364 176 102 4 1 166 273 448 9.06e-28 107
MS.gene069128.t1 MTR_5g070090 38.418 177 95 4 5 172 294 465 9.23e-28 107
MS.gene069128.t1 MTR_7g117170 37.634 186 92 8 1 164 288 471 1.19e-27 107
MS.gene069128.t1 MTR_1g107315 33.702 181 108 4 1 170 291 470 1.22e-27 107
MS.gene069128.t1 MTR_3g009490 35.326 184 97 6 5 166 3 186 1.41e-27 102
MS.gene069128.t1 MTR_4g117950 34.737 190 97 5 4 169 277 463 1.53e-27 107
MS.gene069128.t1 MTR_6g014160 53.571 84 26 1 12 95 287 357 1.64e-27 106
MS.gene069128.t1 MTR_3g009510 38.172 186 89 7 5 166 291 474 2.02e-27 107
MS.gene069128.t1 MTR_8g006730 37.097 186 92 6 1 164 280 462 2.33e-27 107
MS.gene069128.t1 MTR_5g090670 34.211 190 99 4 4 168 288 476 2.66e-27 106
MS.gene069128.t1 MTR_8g009063 34.783 184 100 5 1 164 286 469 2.67e-27 106
MS.gene069128.t1 MTR_7g070660 35.484 186 100 5 5 170 296 481 2.75e-27 107
MS.gene069128.t1 MTR_5g016660 35.135 185 100 5 5 170 302 485 3.41e-27 106
MS.gene069128.t1 MTR_2g046820 36.872 179 97 4 4 166 282 460 3.60e-27 106
MS.gene069128.t1 MTR_2g059240 35.429 175 100 4 1 168 300 468 3.79e-27 106
MS.gene069128.t1 MTR_7g070860 35.294 187 92 5 1 170 290 464 4.16e-27 106
MS.gene069128.t1 MTR_5g090580 34.211 190 99 6 4 168 286 474 4.65e-27 106
MS.gene069128.t1 MTR_7g070930 35.450 189 103 6 1 170 301 489 4.71e-27 106
MS.gene069128.t1 MTR_8g006710 37.705 183 95 6 1 164 279 461 4.91e-27 105
MS.gene069128.t1 MTR_1g032490 33.696 184 102 3 1 169 293 471 5.30e-27 105
MS.gene069128.t1 MTR_4g128690 38.710 155 86 4 20 170 305 454 6.57e-27 105
MS.gene069128.t1 MTR_6g035295 35.326 184 101 4 5 170 303 486 7.14e-27 105
MS.gene069128.t1 MTR_5g098930 35.052 194 92 7 4 168 279 467 1.22e-26 104
MS.gene069128.t1 MTR_4g118000 34.715 193 99 5 1 169 278 467 1.39e-26 104
MS.gene069128.t1 MTR_7g102460 35.638 188 100 6 1 168 298 484 1.42e-26 105
MS.gene069128.t1 MTR_5g045960 35.789 190 100 5 1 168 296 485 1.71e-26 104
MS.gene069128.t1 MTR_4g485640 34.426 183 100 5 4 166 482 664 1.94e-26 105
MS.gene069128.t1 MTR_8g044140 33.514 185 104 5 5 170 266 450 2.24e-26 103
MS.gene069128.t1 MTR_6g488280 36.066 183 98 5 1 164 278 460 2.78e-26 103
MS.gene069128.t1 MTR_0428s0010 36.066 183 98 5 1 164 278 460 2.78e-26 103
MS.gene069128.t1 MTR_7g055710 35.326 184 100 5 1 165 297 480 3.00e-26 103
MS.gene069128.t1 MTR_6g033660 34.078 179 98 5 1 164 286 459 3.39e-26 103
MS.gene069128.t1 MTR_0536s0010 35.789 190 95 5 4 169 291 477 3.85e-26 103
MS.gene069128.t1 MTR_5g090700 32.632 190 102 6 4 168 288 476 4.16e-26 103
MS.gene069128.t1 MTR_4g095008 33.523 176 106 4 1 165 286 461 4.40e-26 103
MS.gene069128.t1 MTR_5g016480 32.370 173 109 3 1 165 295 467 5.47e-26 103
MS.gene069128.t1 MTR_8g006260 40.341 176 86 6 1 157 283 458 5.89e-26 103
MS.gene069128.t1 MTR_1g040310 32.787 183 106 5 5 170 303 485 6.17e-26 103
MS.gene069128.t1 MTR_4g117980 33.503 197 104 5 4 173 293 489 6.70e-26 103
MS.gene069128.t1 MTR_6g023665 34.973 183 100 5 1 164 285 467 8.09e-26 102
MS.gene069128.t1 MTR_6g033675 36.782 174 100 5 1 164 287 460 8.53e-26 102
MS.gene069128.t1 MTR_5g090610 32.984 191 102 6 4 169 272 461 1.42e-25 102
MS.gene069128.t1 MTR_2g046750 34.637 179 101 3 4 166 285 463 1.43e-25 102
MS.gene069128.t1 MTR_8g009067 35.326 184 99 7 1 165 161 343 1.49e-25 100
MS.gene069128.t1 MTR_5g004940 31.250 176 104 3 1 172 219 381 1.52e-25 101
MS.gene069128.t1 MTR_5g090600 33.146 178 100 6 4 168 282 453 1.56e-25 101
MS.gene069128.t1 MTR_7g070910 34.595 185 102 5 5 170 302 486 1.59e-25 102
MS.gene069128.t1 MTR_4g117890 32.990 194 105 5 1 169 282 475 2.38e-25 101
MS.gene069128.t1 MTR_8g465670 37.306 193 90 8 1 165 278 467 3.08e-25 101
MS.gene069128.t1 MTR_8g009067 35.326 184 99 7 1 165 279 461 3.15e-25 100
MS.gene069128.t1 MTR_1g019520 33.880 183 102 5 1 164 26 208 3.23e-25 97.1
MS.gene069128.t1 MTR_1g029540 33.690 187 102 5 1 168 276 459 3.35e-25 100
MS.gene069128.t1 MTR_2g040530 37.017 181 94 7 4 166 284 462 3.73e-25 100
MS.gene069128.t1 MTR_8g008970 42.336 137 65 5 1 124 279 414 3.85e-25 101
MS.gene069128.t1 MTR_8g008970 40.625 128 70 3 43 164 657 784 2.11e-23 96.3
MS.gene069128.t1 MTR_0536s0030 38.608 158 80 4 30 170 196 353 4.17e-25 99.8
MS.gene069128.t1 MTR_8g009073 41.606 137 66 5 1 124 150 285 4.34e-25 99.4
MS.gene069128.t1 MTR_5g090630 33.158 190 101 6 4 168 277 465 6.70e-25 100
MS.gene069128.t1 MTR_0009s0240 33.520 179 108 5 1 169 282 459 6.83e-25 100
MS.gene069128.t1 MTR_8g027870 35.593 177 94 6 1 157 285 461 7.71e-25 100
MS.gene069128.t1 MTR_8g009073 41.606 137 66 5 1 124 279 414 9.53e-25 99.8
MS.gene069128.t1 MTR_7g039550 33.880 183 104 4 5 170 81 263 1.08e-24 97.1
MS.gene069128.t1 MTR_8g027885 35.593 177 94 6 1 157 285 461 1.10e-24 99.8
MS.gene069128.t1 MTR_5g072860 33.898 177 100 4 1 168 297 465 1.22e-24 99.4
MS.gene069128.t1 MTR_2g035020 35.714 154 83 3 34 171 331 484 1.44e-24 99.4
MS.gene069128.t1 MTR_2g035040 31.250 192 108 4 2 169 196 387 1.63e-24 98.6
MS.gene069128.t1 MTR_8g006270 31.351 185 107 4 1 165 276 460 1.68e-24 99.0
MS.gene069128.t1 MTR_7g046490 34.595 185 101 6 1 165 276 460 1.86e-24 99.0
MS.gene069128.t1 MTR_6g035265 33.508 191 102 5 1 166 281 471 2.28e-24 98.6
MS.gene069128.t1 MTR_7g013180 32.500 160 100 3 8 163 287 442 2.32e-24 98.6
MS.gene069128.t1 MTR_5g070040 40.994 161 66 6 5 141 294 449 2.33e-24 98.6
MS.gene069128.t1 MTR_4g008630 33.152 184 107 3 1 168 279 462 3.58e-24 98.2
MS.gene069128.t1 MTR_0184s0040 31.319 182 107 5 1 164 295 476 3.59e-24 98.2
MS.gene069128.t1 MTR_0078s0190 31.319 182 107 5 1 164 295 476 3.59e-24 98.2
MS.gene069128.t1 MTR_1g107285 32.000 175 106 3 3 169 295 464 4.89e-24 97.8
MS.gene069128.t1 MTR_5g039900 33.333 183 105 4 5 170 303 485 5.26e-24 97.8
MS.gene069128.t1 MTR_7g047030 34.043 188 95 7 1 164 280 462 6.23e-24 97.4
MS.gene069128.t1 MTR_7g047270 34.043 188 95 7 1 164 280 462 6.23e-24 97.4
MS.gene069128.t1 MTR_7g012120 31.088 193 109 4 1 169 292 484 6.42e-24 97.4
MS.gene069128.t1 MTR_6g035185 31.818 198 102 5 1 169 290 483 7.89e-24 97.1
MS.gene069128.t1 MTR_2g034990 36.184 152 81 3 34 169 331 482 8.82e-24 97.1
MS.gene069128.t1 MTR_5g090660 31.414 191 103 6 4 168 284 472 1.14e-23 97.1
MS.gene069128.t1 MTR_4g082820 37.222 180 97 7 1 166 284 461 1.37e-23 96.3
MS.gene069128.t1 MTR_8g064880 34.228 149 83 5 1 135 294 441 1.58e-23 96.3
MS.gene069128.t1 MTR_5g090620 32.821 195 96 7 4 168 286 475 2.07e-23 95.9
MS.gene069128.t1 MTR_7g070870 35.227 176 99 5 1 170 294 460 2.13e-23 95.9
MS.gene069128.t1 MTR_5g067170 32.124 193 107 4 1 169 288 480 2.21e-23 95.9
MS.gene069128.t1 MTR_5g029800 35.333 150 81 3 36 169 329 478 4.64e-23 95.1
MS.gene069128.t1 MTR_8g006220 41.912 136 56 5 1 113 277 412 5.00e-23 95.1
MS.gene069128.t1 MTR_4g485590 44.954 109 59 1 5 112 273 381 5.29e-23 94.4
MS.gene069128.t1 MTR_7g070995 37.589 141 72 5 46 170 6 146 6.02e-23 89.7
MS.gene069128.t1 MTR_8g071070 31.285 179 112 4 1 169 292 469 1.12e-22 94.0
MS.gene069128.t1 MTR_0078s0010 31.892 185 103 6 1 164 280 462 1.18e-22 94.0
MS.gene069128.t1 MTR_0078s0060 32.787 183 104 7 1 164 279 461 1.69e-22 93.6
MS.gene069128.t1 MTR_8g032950 31.633 196 109 5 1 171 288 483 1.73e-22 93.6
MS.gene069128.t1 MTR_7g470610 42.105 114 62 3 1 110 154 267 3.75e-22 90.5
MS.gene069128.t1 MTR_7g070583 42.105 114 62 3 1 110 154 267 3.75e-22 90.5
MS.gene069128.t1 MTR_5g019580 32.447 188 97 8 1 161 311 495 4.79e-22 92.4
MS.gene069128.t1 MTR_5g019580 32.086 187 99 7 1 161 287 471 4.94e-22 92.0
MS.gene069128.t1 MTR_7g071050 42.857 112 60 3 5 112 257 368 1.14e-21 90.9
MS.gene069128.t1 MTR_5g098960 38.393 112 66 2 18 128 300 409 1.33e-21 90.9
MS.gene069128.t1 MTR_1g107325 32.680 153 96 2 24 169 201 353 1.35e-21 90.1
MS.gene069128.t1 MTR_5g075440 33.143 175 100 5 1 165 285 452 2.23e-21 90.1
MS.gene069128.t1 MTR_4g082810 42.727 110 54 4 1 102 287 395 5.46e-21 89.0
MS.gene069128.t1 MTR_5g072810 35.057 174 94 4 8 170 290 455 7.40e-21 88.6
MS.gene069128.t1 MTR_5g087620 31.016 187 110 5 1 168 307 493 6.73e-20 86.3
MS.gene069128.t1 MTR_8g056740 38.806 134 78 3 5 135 194 326 1.77e-19 84.7
MS.gene069128.t1 MTR_8g074550 29.952 207 104 8 1 168 284 488 2.61e-19 84.3
MS.gene069128.t1 MTR_5g072830 32.778 180 102 4 2 170 279 450 2.85e-19 84.3
MS.gene069128.t1 MTR_6g013680 31.953 169 63 5 1 168 257 374 3.72e-19 83.6
MS.gene069128.t1 MTR_5g072840 34.483 174 95 4 8 170 285 450 5.66e-19 83.2
MS.gene069128.t1 MTR_3g031450 31.073 177 105 4 1 168 283 451 1.10e-18 82.8
MS.gene069128.t1 MTR_7g080960 35.433 127 65 3 44 170 360 469 1.22e-18 82.4
MS.gene069128.t1 MTR_5g072820 34.483 174 95 4 8 170 285 450 2.20e-18 81.6
MS.gene069128.t1 MTR_8g466240 37.984 129 67 5 46 166 328 451 3.31e-18 81.3
MS.gene069128.t1 MTR_3g031400 31.638 177 104 4 1 168 281 449 5.02e-18 80.9
MS.gene069128.t1 MTR_5g027210 28.652 178 93 5 2 145 298 475 1.39e-17 79.3
MS.gene069128.t1 MTR_2g098430 35.965 114 63 2 1 104 289 402 2.72e-17 78.6
MS.gene069128.t1 MTR_5g072850 33.136 169 85 4 2 165 233 378 6.61e-17 77.4
MS.gene069128.t1 MTR_7g067120 33.562 146 87 5 1 142 263 402 6.98e-17 77.4
MS.gene069128.t1 MTR_7g067330 31.056 161 86 5 1 160 263 399 1.15e-16 76.6
MS.gene069128.t1 MTR_8g068360 38.318 107 62 2 2 104 292 398 1.21e-16 76.6
MS.gene069128.t1 MTR_6g078320 30.539 167 101 5 3 156 303 467 2.30e-16 75.9
MS.gene069128.t1 MTR_8g068340 34.839 155 90 6 2 146 293 446 3.77e-16 75.5
MS.gene069128.t1 MTR_8g007650 32.710 107 69 2 1 104 291 397 1.85e-15 73.2
MS.gene069128.t1 MTR_5g066410 34.579 107 67 2 1 104 267 373 2.57e-15 72.8
MS.gene069128.t1 MTR_8g068330 30.519 154 98 5 2 146 289 442 4.07e-15 72.4
MS.gene069128.t1 MTR_8g007565 31.776 107 70 2 1 104 291 397 7.14e-15 71.6
MS.gene069128.t1 MTR_7g070760 35.398 113 49 2 1 112 112 201 7.86e-15 69.7
MS.gene069128.t1 MTR_0475s0030 44.444 63 35 0 64 126 13 75 9.12e-15 66.6
MS.gene069128.t1 MTR_3g435310 32.381 105 69 2 1 104 248 351 2.65e-12 64.3
MS.gene069128.t1 MTR_6g015160 49.020 51 25 1 64 113 30 80 3.15e-12 60.1
MS.gene069128.t1 MTR_5g090690 39.130 92 39 3 4 80 216 305 3.82e-12 63.5
MS.gene069128.t1 MTR_6g036650 33.333 105 68 2 1 104 299 402 3.97e-12 63.9
MS.gene069128.t1 MTR_6g042310 28.481 158 98 7 1 148 292 444 4.98e-12 63.5
MS.gene069128.t1 MTR_2g008226 29.221 154 94 6 1 144 298 446 5.08e-12 63.5
MS.gene069128.t1 MTR_2g014900 30.882 136 84 4 8 134 285 419 1.80e-11 62.0
MS.gene069128.t1 MTR_2g008220 33.333 105 68 2 1 104 293 396 2.11e-11 61.6
MS.gene069128.t1 MTR_2g008225 33.333 105 68 2 1 104 294 397 2.71e-11 61.2
MS.gene069128.t1 MTR_4g123553 30.556 108 67 3 1 104 289 392 3.67e-11 60.8
MS.gene069128.t1 MTR_2g046620 31.429 105 70 2 1 104 290 393 6.58e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069128.t1 AT3G11340 43.529 170 92 2 5 170 277 446 3.43e-44 151
MS.gene069128.t1 AT5G05880 45.882 170 88 2 5 170 281 450 1.60e-43 150
MS.gene069128.t1 AT3G46660 41.954 174 97 2 1 170 284 457 1.92e-43 150
MS.gene069128.t1 AT5G05860 45.349 172 90 2 1 168 276 447 3.01e-42 146
MS.gene069128.t1 AT5G05900 46.386 166 82 3 5 168 287 447 5.41e-42 145
MS.gene069128.t1 AT5G05890 42.529 174 96 2 1 170 281 454 3.37e-41 144
MS.gene069128.t1 AT3G46670 42.529 174 96 2 1 170 277 450 6.51e-41 143
MS.gene069128.t1 AT1G78270 44.751 181 90 5 1 171 309 489 1.16e-40 143
MS.gene069128.t1 AT1G22380 41.520 171 97 3 1 168 310 480 1.17e-40 143
MS.gene069128.t1 AT5G05870 43.023 172 94 2 1 168 283 454 2.14e-40 142
MS.gene069128.t1 AT1G22400 42.262 168 94 3 1 165 311 478 4.16e-40 141
MS.gene069128.t1 AT5G38010 41.667 168 95 2 4 168 286 453 1.61e-39 139
MS.gene069128.t1 AT5G38040 39.080 174 97 3 1 168 279 449 1.35e-38 137
MS.gene069128.t1 AT5G59580 38.728 173 102 2 1 169 276 448 3.40e-38 135
MS.gene069128.t1 AT3G55710 42.105 171 93 3 5 170 287 456 4.45e-38 135
MS.gene069128.t1 AT3G55700 40.936 171 97 2 4 170 282 452 4.26e-37 133
MS.gene069128.t1 AT3G46700 39.655 174 101 2 1 170 273 446 5.23e-37 132
MS.gene069128.t1 AT1G22340 41.860 172 96 3 1 168 310 481 1.06e-36 132
MS.gene069128.t1 AT3G46680 39.053 169 99 2 1 165 278 446 1.20e-36 131
MS.gene069128.t1 AT2G26480 39.080 174 100 3 1 168 272 445 2.20e-36 131
MS.gene069128.t1 AT3G46720 39.766 171 98 3 1 170 276 442 2.41e-36 130
MS.gene069128.t1 AT4G15480 38.983 177 97 2 1 166 300 476 2.75e-36 131
MS.gene069128.t1 AT1G22360 39.766 171 100 3 1 168 307 477 8.88e-36 130
MS.gene069128.t1 AT5G59590 37.870 169 101 2 1 165 278 446 1.94e-35 128
MS.gene069128.t1 AT3G46690 40.805 174 99 2 1 170 278 451 4.62e-35 127
MS.gene069128.t1 AT1G22370 40.351 171 99 3 1 168 135 305 2.66e-34 122
MS.gene069128.t1 AT1G22360 40.588 170 88 5 1 168 307 465 7.19e-34 124
MS.gene069128.t1 AT1G22370 40.351 171 99 3 1 168 305 475 2.47e-33 123
MS.gene069128.t1 AT5G17040 38.824 170 91 6 5 168 175 337 1.97e-32 118
MS.gene069128.t1 AT5G26310 38.503 187 87 8 1 161 276 460 4.07e-32 120
MS.gene069128.t1 AT3G46650 37.209 172 104 2 1 168 261 432 4.21e-32 119
MS.gene069128.t1 AT3G53160 36.788 193 92 5 5 172 299 486 5.64e-32 119
MS.gene069128.t1 AT5G17040 38.824 170 91 6 5 168 277 439 5.67e-32 119
MS.gene069128.t1 AT2G15490 37.989 179 97 5 1 166 298 475 1.15e-31 119
MS.gene069128.t1 AT2G15490 37.363 182 97 5 1 166 298 478 3.01e-31 117
MS.gene069128.t1 AT5G17050 38.095 168 95 5 5 168 294 456 5.11e-31 117
MS.gene069128.t1 AT2G15480 35.393 178 103 3 1 166 301 478 6.90e-31 116
MS.gene069128.t1 AT5G17030 36.686 169 96 4 5 168 293 455 7.92e-31 116
MS.gene069128.t1 AT4G15550 32.432 185 100 3 1 165 291 470 9.79e-31 116
MS.gene069128.t1 AT1G05675 38.824 170 96 3 1 165 283 449 2.34e-30 115
MS.gene069128.t1 AT1G05680 38.202 178 86 4 1 165 283 449 2.44e-30 115
MS.gene069128.t1 AT2G15480 34.043 188 102 3 1 166 301 488 4.34e-30 114
MS.gene069128.t1 AT3G02100 37.356 174 94 4 1 170 299 461 1.10e-29 113
MS.gene069128.t1 AT2G36760 36.458 192 98 4 5 172 305 496 1.50e-29 113
MS.gene069128.t1 AT4G34138 38.857 175 93 4 4 166 304 476 1.65e-29 113
MS.gene069128.t1 AT2G43840 35.429 175 103 4 1 169 277 447 1.91e-29 112
MS.gene069128.t1 AT2G43840 35.429 175 103 4 1 169 277 447 2.16e-29 112
MS.gene069128.t1 AT4G15490 36.932 176 95 4 1 165 293 463 2.97e-29 112
MS.gene069128.t1 AT3G16520 36.723 177 99 5 1 166 283 457 3.01e-29 112
MS.gene069128.t1 AT2G36780 35.870 184 98 4 5 168 305 488 3.19e-29 112
MS.gene069128.t1 AT2G43820 36.025 161 95 3 16 170 290 448 3.94e-29 111
MS.gene069128.t1 AT2G28080 37.584 149 87 4 1 143 301 449 5.67e-29 111
MS.gene069128.t1 AT2G29710 31.977 172 109 1 8 171 294 465 1.63e-28 110
MS.gene069128.t1 AT2G36970 35.260 173 107 3 3 170 300 472 1.81e-28 110
MS.gene069128.t1 AT4G15500 36.364 176 96 3 1 165 289 459 2.42e-28 109
MS.gene069128.t1 AT2G23250 38.235 170 95 5 9 171 272 438 3.50e-28 108
MS.gene069128.t1 AT3G21560 37.500 176 96 4 1 166 299 470 3.80e-28 109
MS.gene069128.t1 AT5G66690 37.853 177 88 6 1 155 276 452 3.81e-28 109
MS.gene069128.t1 AT4G34131 35.754 179 102 5 4 170 304 481 4.17e-28 108
MS.gene069128.t1 AT2G36800 35.450 189 92 6 5 168 304 487 5.93e-28 108
MS.gene069128.t1 AT2G31750 33.143 175 107 4 1 168 283 454 9.11e-28 107
MS.gene069128.t1 AT2G36770 35.676 185 97 5 5 168 305 488 9.26e-28 108
MS.gene069128.t1 AT2G23260 37.500 168 93 6 9 168 290 453 1.01e-27 107
MS.gene069128.t1 AT2G31750 33.143 175 107 4 1 168 283 454 1.19e-27 107
MS.gene069128.t1 AT1G30530 39.053 169 94 5 4 168 287 450 1.39e-27 107
MS.gene069128.t1 AT4G14090 34.356 163 99 3 11 166 292 453 4.67e-27 105
MS.gene069128.t1 AT2G29730 31.073 177 107 3 8 173 295 467 5.70e-27 105
MS.gene069128.t1 AT2G36750 34.595 185 99 4 5 168 300 483 5.76e-27 105
MS.gene069128.t1 AT3G16520 40.714 140 72 4 1 129 283 422 6.67e-27 105
MS.gene069128.t1 AT1G05560 32.796 186 102 3 1 168 271 451 7.14e-27 105
MS.gene069128.t1 AT3G16520 40.714 140 72 4 1 129 283 422 7.90e-27 105
MS.gene069128.t1 AT1G05560 32.796 186 102 3 1 168 321 501 8.24e-27 105
MS.gene069128.t1 AT1G01420 38.824 170 81 7 1 151 284 449 8.76e-27 105
MS.gene069128.t1 AT1G01420 38.824 170 81 7 1 151 281 446 9.41e-27 105
MS.gene069128.t1 AT1G05530 32.258 186 103 3 1 168 274 454 1.12e-26 105
MS.gene069128.t1 AT3G50740 35.912 181 88 7 1 155 281 459 1.13e-26 105
MS.gene069128.t1 AT2G36790 35.955 178 84 7 16 168 315 487 1.27e-26 105
MS.gene069128.t1 AT2G30140 35.057 174 97 4 8 172 289 455 1.32e-26 104
MS.gene069128.t1 AT2G30140 35.057 174 97 4 8 172 288 454 1.46e-26 104
MS.gene069128.t1 AT2G31790 30.814 172 109 4 1 165 285 453 7.92e-26 102
MS.gene069128.t1 AT4G36770 37.838 148 73 4 1 129 276 423 1.14e-25 102
MS.gene069128.t1 AT4G01070 35.000 180 98 6 1 161 281 460 1.37e-25 102
MS.gene069128.t1 AT4G34135 36.872 179 101 3 4 170 305 483 2.36e-25 101
MS.gene069128.t1 AT1G07250 36.257 171 83 5 5 157 299 461 3.76e-25 100
MS.gene069128.t1 AT1G73880 32.203 177 112 4 1 170 293 468 3.94e-25 100
MS.gene069128.t1 AT1G24100 33.898 177 102 4 1 168 288 458 6.28e-25 100
MS.gene069128.t1 AT5G14860 36.364 176 100 6 1 166 300 473 1.01e-24 99.8
MS.gene069128.t1 AT4G15260 33.684 190 101 5 1 166 164 352 2.62e-24 97.4
MS.gene069128.t1 AT1G07260 35.632 174 98 5 5 166 298 469 4.56e-24 97.8
MS.gene069128.t1 AT1G07240 34.831 178 102 4 5 168 298 475 5.50e-24 97.8
MS.gene069128.t1 AT2G18570 36.111 180 96 6 1 161 280 459 1.85e-23 96.3
MS.gene069128.t1 AT1G01390 42.373 118 54 3 1 104 281 398 8.39e-23 94.4
MS.gene069128.t1 AT1G01390 42.373 118 54 3 1 104 298 415 8.88e-23 94.4
MS.gene069128.t1 AT3G53150 33.166 199 94 7 5 168 315 509 1.25e-22 94.0
MS.gene069128.t1 AT3G21790 31.746 189 104 5 4 168 291 478 3.19e-22 92.8
MS.gene069128.t1 AT2G29740 30.769 182 104 4 1 166 297 472 3.59e-22 92.4
MS.gene069128.t1 AT2G16890 31.818 176 107 5 1 166 293 465 6.20e-22 92.0
MS.gene069128.t1 AT2G30150 32.353 170 99 4 8 168 274 436 1.15e-21 90.9
MS.gene069128.t1 AT4G15280 31.217 189 106 5 1 166 316 503 1.20e-21 91.3
MS.gene069128.t1 AT4G15280 31.217 189 106 5 1 166 284 471 1.28e-21 90.9
MS.gene069128.t1 AT2G30150 32.353 170 99 4 8 168 290 452 1.33e-21 90.9
MS.gene069128.t1 AT2G29750 29.545 176 111 3 1 165 297 470 6.08e-21 89.0
MS.gene069128.t1 AT3G21760 33.333 186 96 5 8 168 298 480 6.77e-21 89.0
MS.gene069128.t1 AT2G16890 39.640 111 63 2 1 110 293 400 3.21e-20 86.7
MS.gene069128.t1 AT2G18560 32.778 180 102 6 1 161 190 369 6.62e-20 85.5
MS.gene069128.t1 AT3G21750 32.487 197 109 5 1 173 277 473 6.78e-20 86.3
MS.gene069128.t1 AT3G21780 30.159 189 108 5 1 166 279 466 7.59e-20 85.9
MS.gene069128.t1 AT5G03490 31.609 174 103 5 1 166 295 460 8.57e-20 85.9
MS.gene069128.t1 AT1G10400 34.104 173 100 6 1 165 293 459 9.69e-20 85.5
MS.gene069128.t1 AT1G51210 34.228 149 87 3 1 144 291 433 1.39e-19 85.1
MS.gene069128.t1 AT5G12890 44.037 109 51 4 1 99 296 404 2.96e-19 84.3
MS.gene069128.t1 AT3G21800 42.149 121 57 4 4 113 288 406 4.18e-19 84.0
MS.gene069128.t1 AT3G22250 33.858 127 77 3 12 133 308 432 5.98e-19 83.6
MS.gene069128.t1 AT1G06000 30.120 166 96 6 16 165 269 430 6.37e-19 83.2
MS.gene069128.t1 AT5G37950 41.573 89 50 1 1 87 249 337 7.03e-17 77.0
MS.gene069128.t1 AT5G37950 41.573 89 50 1 1 87 255 343 8.31e-17 76.6
MS.gene069128.t1 AT5G65550 36.283 113 69 3 1 112 290 400 6.82e-16 74.7
MS.gene069128.t1 AT5G49690 37.864 103 58 2 1 102 287 384 1.04e-15 73.9
MS.gene069128.t1 AT2G22590 35.514 107 65 2 2 104 295 401 4.94e-11 60.5

Find 40 sgRNAs with CRISPR-Local

Find 52 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATACTGAATCAAATTT+TGG 0.160775 5.3:-20542900 None:intergenic
TGCTATTGAAATGGCGGATT+TGG 0.219461 5.3:+20542834 MS.gene069128:CDS
ATTTGTTGATCAGCAAAATA+AGG 0.280250 5.3:-20542685 None:intergenic
GTGAGTGAGGTTTGGAAGCT+TGG 0.307721 5.3:+20542721 MS.gene069128:CDS
CCAAACATGGTACAAGAAAA+AGG 0.313624 5.3:+20542493 MS.gene069128:CDS
AAAATTTGATTCAGTATATA+AGG 0.317414 5.3:+20542902 MS.gene069128:CDS
GAGAAGAAATACTTGAGATT+TGG 0.328817 5.3:+20542425 MS.gene069128:CDS
CTGATCAACAAATTAATAGT+AGG 0.360356 5.3:+20542695 MS.gene069128:CDS
CCACCCACTATGTGTCAAAA+AGG 0.361214 5.3:-20542614 None:intergenic
TAGGAATGTTGTTGAGAAAA+TGG 0.389004 5.3:+20542768 MS.gene069128:CDS
TTCAAGATCTGCTATTGAAA+TGG 0.395191 5.3:+20542825 MS.gene069128:CDS
GTAGGTTTGTGAGTGAGGTT+TGG 0.420544 5.3:+20542713 MS.gene069128:CDS
GAAAGGGATGATTGTGGGGT+GGG 0.454518 5.3:+20542552 MS.gene069128:CDS
AAATAAGGCCAACATATCAT+AGG 0.459700 5.3:-20542670 None:intergenic
TTGTTGTAGGAGGAACCATT+AGG 0.462958 5.3:-20542874 None:intergenic
TCCAAGAGTGTAAGTCCTAA+TGG 0.463911 5.3:+20542859 MS.gene069128:CDS
AAAGAGAAAGGGATGATTGT+GGG 0.472351 5.3:+20542547 MS.gene069128:CDS
TAATAGTAGGTTTGTGAGTG+AGG 0.474155 5.3:+20542708 MS.gene069128:CDS
TGAGGTTTGGAAGCTTGGAT+TGG 0.475109 5.3:+20542726 MS.gene069128:CDS
ACCATTAGGACTTACACTCT+TGG 0.484150 5.3:-20542860 None:intergenic
GAAGGGACTACTAAAGAGAA+AGG 0.498754 5.3:+20542535 MS.gene069128:CDS
ACTTTGGAGAGTGTGGTTTG+TGG 0.515528 5.3:+20542643 MS.gene069128:CDS
ATATGAAAGATGTTTGTGAT+AGG 0.519622 5.3:+20542749 MS.gene069128:CDS
GAAATACTTGAGATTTGGCA+TGG 0.537768 5.3:+20542430 MS.gene069128:CDS
TAGTGGGTGGAACTCTACTT+TGG 0.543912 5.3:+20542627 MS.gene069128:CDS
GTGGCGTGCCTATGATATGT+TGG 0.544947 5.3:+20542662 MS.gene069128:CDS
GAACTCTACTTTGGAGAGTG+TGG 0.546332 5.3:+20542636 MS.gene069128:CDS
TGTGACAAAACTTCCTCTTG+TGG 0.551208 5.3:-20542577 None:intergenic
TGATATTATGATGAACAAGA+AGG 0.557986 5.3:+20542795 MS.gene069128:CDS
CTATTGAAGGAGCTTGAGGA+AGG 0.558458 5.3:+20542517 MS.gene069128:CDS
AAGATCTGCTATTGAAATGG+CGG 0.566824 5.3:+20542828 MS.gene069128:CDS
TAAAGAGAAAGGGATGATTG+TGG 0.571564 5.3:+20542546 MS.gene069128:CDS
AGGACTATTGAAGGAGCTTG+AGG 0.572112 5.3:+20542513 MS.gene069128:CDS
AGAAAGGGATGATTGTGGGG+TGG 0.586735 5.3:+20542551 MS.gene069128:CDS
GTGGGTGATTAGGCCAAACA+TGG 0.589150 5.3:+20542480 MS.gene069128:CDS
TGTGGGGTGGGTTCCACAAG+AGG 0.592500 5.3:+20542564 MS.gene069128:CDS
AAGGGACTACTAAAGAGAAA+GGG 0.595105 5.3:+20542536 MS.gene069128:CDS
AAGAGAAAGGGATGATTGTG+GGG 0.603887 5.3:+20542548 MS.gene069128:CDS
TATTGAAGGAGCTTGAGGAA+GGG 0.618899 5.3:+20542518 MS.gene069128:CDS
TATTATGATGAACAAGAAGG+AGG 0.632410 5.3:+20542798 MS.gene069128:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTGATTCAGTATATA+AGG + chr5.3:20542902-20542921 MS.gene069128:CDS 15.0%
!!! TTATATACTGAATCAAATTT+TGG - chr5.3:20542903-20542922 None:intergenic 15.0%
! ATATGAAAGATGTTTGTGAT+AGG + chr5.3:20542749-20542768 MS.gene069128:CDS 25.0%
! CTGATCAACAAATTAATAGT+AGG + chr5.3:20542695-20542714 MS.gene069128:CDS 25.0%
! TGATATTATGATGAACAAGA+AGG + chr5.3:20542795-20542814 MS.gene069128:CDS 25.0%
!! ATAGCAAAAAACGATTTTTG+TGG + chr5.3:20542461-20542480 MS.gene069128:CDS 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG - chr5.3:20542688-20542707 None:intergenic 25.0%
!! TAGCAAAAAACGATTTTTGT+GGG + chr5.3:20542462-20542481 MS.gene069128:CDS 25.0%
!! TATACTGAATCAAATTTTGG+AGG - chr5.3:20542900-20542919 None:intergenic 25.0%
AAATAAGGCCAACATATCAT+AGG - chr5.3:20542673-20542692 None:intergenic 30.0%
ACAAGAAAAAGGACTATTGA+AGG + chr5.3:20542504-20542523 MS.gene069128:CDS 30.0%
GAGAAGAAATACTTGAGATT+TGG + chr5.3:20542425-20542444 MS.gene069128:CDS 30.0%
TAGGAATGTTGTTGAGAAAA+TGG + chr5.3:20542768-20542787 MS.gene069128:CDS 30.0%
TATTATGATGAACAAGAAGG+AGG + chr5.3:20542798-20542817 MS.gene069128:CDS 30.0%
TTCAAGATCTGCTATTGAAA+TGG + chr5.3:20542825-20542844 MS.gene069128:CDS 30.0%
AAAGAGAAAGGGATGATTGT+GGG + chr5.3:20542547-20542566 MS.gene069128:CDS 35.0%
AAGATCTGCTATTGAAATGG+CGG + chr5.3:20542828-20542847 MS.gene069128:CDS 35.0%
AAGGGACTACTAAAGAGAAA+GGG + chr5.3:20542536-20542555 MS.gene069128:CDS 35.0%
CCAAACATGGTACAAGAAAA+AGG + chr5.3:20542493-20542512 MS.gene069128:CDS 35.0%
GAAATACTTGAGATTTGGCA+TGG + chr5.3:20542430-20542449 MS.gene069128:CDS 35.0%
TAAAGAGAAAGGGATGATTG+TGG + chr5.3:20542546-20542565 MS.gene069128:CDS 35.0%
TAATAGTAGGTTTGTGAGTG+AGG + chr5.3:20542708-20542727 MS.gene069128:CDS 35.0%
! AACGATTTTTGTGGGTGATT+AGG + chr5.3:20542470-20542489 MS.gene069128:CDS 35.0%
! CCTTTTTCTTGTACCATGTT+TGG - chr5.3:20542496-20542515 None:intergenic 35.0%
! GTTTTGTCACACAAAGCAAT+TGG + chr5.3:20542589-20542608 MS.gene069128:CDS 35.0%
!! CAAATTTTGGAGGTTGTTGT+AGG - chr5.3:20542890-20542909 None:intergenic 35.0%
AAGAGAAAGGGATGATTGTG+GGG + chr5.3:20542548-20542567 MS.gene069128:CDS 40.0%
ACCATTAGGACTTACACTCT+TGG - chr5.3:20542863-20542882 None:intergenic 40.0%
GAAGGGACTACTAAAGAGAA+AGG + chr5.3:20542535-20542554 MS.gene069128:CDS 40.0%
TATTGAAGGAGCTTGAGGAA+GGG + chr5.3:20542518-20542537 MS.gene069128:CDS 40.0%
TGTGACAAAACTTCCTCTTG+TGG - chr5.3:20542580-20542599 None:intergenic 40.0%
TTGTTGTAGGAGGAACCATT+AGG - chr5.3:20542877-20542896 None:intergenic 40.0%
! GTGCCTTTTTGACACATAGT+GGG + chr5.3:20542611-20542630 MS.gene069128:CDS 40.0%
! TCCAAGAGTGTAAGTCCTAA+TGG + chr5.3:20542859-20542878 MS.gene069128:CDS 40.0%
!! ATTTTGGAGGTTGTTGTAGG+AGG - chr5.3:20542887-20542906 None:intergenic 40.0%
!! TGCTATTGAAATGGCGGATT+TGG + chr5.3:20542834-20542853 MS.gene069128:CDS 40.0%
AGGACTATTGAAGGAGCTTG+AGG + chr5.3:20542513-20542532 MS.gene069128:CDS 45.0%
CCACCCACTATGTGTCAAAA+AGG - chr5.3:20542617-20542636 None:intergenic 45.0%
CTATTGAAGGAGCTTGAGGA+AGG + chr5.3:20542517-20542536 MS.gene069128:CDS 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG + chr5.3:20542713-20542732 MS.gene069128:CDS 45.0%
TGAGGTTTGGAAGCTTGGAT+TGG + chr5.3:20542726-20542745 MS.gene069128:CDS 45.0%
! ACTTTGGAGAGTGTGGTTTG+TGG + chr5.3:20542643-20542662 MS.gene069128:CDS 45.0%
! GAACTCTACTTTGGAGAGTG+TGG + chr5.3:20542636-20542655 MS.gene069128:CDS 45.0%
! GGTGCCTTTTTGACACATAG+TGG + chr5.3:20542610-20542629 MS.gene069128:CDS 45.0%
! TAGTGGGTGGAACTCTACTT+TGG + chr5.3:20542627-20542646 MS.gene069128:CDS 45.0%
!! CCTTTTTGACACATAGTGGG+TGG + chr5.3:20542614-20542633 MS.gene069128:CDS 45.0%
AGAAAGGGATGATTGTGGGG+TGG + chr5.3:20542551-20542570 MS.gene069128:CDS 50.0%
GAAAGGGATGATTGTGGGGT+GGG + chr5.3:20542552-20542571 MS.gene069128:CDS 50.0%
GTGAGTGAGGTTTGGAAGCT+TGG + chr5.3:20542721-20542740 MS.gene069128:CDS 50.0%
GTGGCGTGCCTATGATATGT+TGG + chr5.3:20542662-20542681 MS.gene069128:CDS 50.0%
GTGGGTGATTAGGCCAAACA+TGG + chr5.3:20542480-20542499 MS.gene069128:CDS 50.0%
! TGTGGGGTGGGTTCCACAAG+AGG + chr5.3:20542564-20542583 MS.gene069128:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 20542418 20542939 20542418 ID=MS.gene069128
chr5.3 mRNA 20542418 20542939 20542418 ID=MS.gene069128.t1;Parent=MS.gene069128
chr5.3 exon 20542418 20542939 20542418 ID=MS.gene069128.t1.exon1;Parent=MS.gene069128.t1
chr5.3 CDS 20542418 20542939 20542418 ID=cds.MS.gene069128.t1;Parent=MS.gene069128.t1
Gene Sequence

>MS.gene069128

ATGACAAGAGAAGAAATACTTGAGATTTGGCATGGTTTATTGAATAGCAAAAAACGATTTTTGTGGGTGATTAGGCCAAACATGGTACAAGAAAAAGGACTATTGAAGGAGCTTGAGGAAGGGACTACTAAAGAGAAAGGGATGATTGTGGGGTGGGTTCCACAAGAGGAAGTTTTGTCACACAAAGCAATTGGTGCCTTTTTGACACATAGTGGGTGGAACTCTACTTTGGAGAGTGTGGTTTGTGGCGTGCCTATGATATGTTGGCCTTATTTTGCTGATCAACAAATTAATAGTAGGTTTGTGAGTGAGGTTTGGAAGCTTGGATTGGATATGAAAGATGTTTGTGATAGGAATGTTGTTGAGAAAATGGTGAATGATATTATGATGAACAAGAAGGAGGAGTTTTCAAGATCTGCTATTGAAATGGCGGATTTGGCTTCCAAGAGTGTAAGTCCTAATGGTTCCTCCTACAACAACCTCCAAAATTTGATTCAGTATATAAGGTCTACTAGCCCATAA
Protein sequence

>MS.gene069128.t1

MTREEILEIWHGLLNSKKRFLWVIRPNMVQEKGLLKELEEGTTKEKGMIVGWVPQEEVLSHKAIGAFLTHSGWNSTLESVVCGVPMICWPYFADQQINSRFVSEVWKLGLDMKDVCDRNVVEKMVNDIMMNKKEEFSRSAIEMADLASKSVSPNGSSYNNLQNLIQYIRSTSP