Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069185.t1 | XP_003612927.1 | 96.5 | 654 | 22 | 1 | 4 | 657 | 6 | 658 | 0.00E+00 | 1284.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069185.t1 | Q9T074 | 85.5 | 636 | 81 | 4 | 31 | 657 | 38 | 671 | 0.0e+00 | 1112.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069185.t1 | G7KF50 | 96.5 | 654 | 22 | 1 | 4 | 657 | 6 | 658 | 0.0e+00 | 1284.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049265 | MS.gene069185 | 0.8335 | 5.15E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069185.t1 | MTR_5g430730 | 98.331 | 659 | 8 | 2 | 1 | 657 | 1 | 658 | 0.0 | 1350 |
| MS.gene069185.t1 | MTR_5g030620 | 98.331 | 659 | 8 | 2 | 1 | 657 | 1 | 658 | 0.0 | 1350 |
| MS.gene069185.t1 | MTR_8g067275 | 85.491 | 641 | 82 | 6 | 22 | 657 | 13 | 647 | 0.0 | 1103 |
| MS.gene069185.t1 | MTR_3g111120 | 81.431 | 657 | 108 | 5 | 14 | 657 | 26 | 681 | 0.0 | 1099 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069185.t1 | AT4G37870 | 83.358 | 667 | 97 | 6 | 2 | 657 | 8 | 671 | 0.0 | 1148 |
| MS.gene069185.t1 | AT5G65690 | 78.267 | 681 | 113 | 7 | 1 | 657 | 1 | 670 | 0.0 | 1100 |
| MS.gene069185.t1 | AT5G65690 | 78.267 | 681 | 113 | 7 | 1 | 657 | 1 | 670 | 0.0 | 1100 |
| MS.gene069185.t1 | AT5G65690 | 74.860 | 712 | 113 | 8 | 1 | 657 | 1 | 701 | 0.0 | 1084 |
| MS.gene069185.t1 | AT5G65690 | 78.646 | 576 | 89 | 6 | 1 | 552 | 1 | 566 | 0.0 | 942 |
Find 176 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTGGAGTTGCAATTTC+TGG | 0.160747 | 5.3:+19732778 | None:intergenic |
| GGAGCAATGGCAACACTTTC+TGG | 0.186986 | 5.3:-19730158 | MS.gene069185:CDS |
| GGCGATGTTGCTCTCTTCTT+TGG | 0.196899 | 5.3:-19727980 | MS.gene069185:CDS |
| CCTGAAGAGCTGGAGAATTT+TGG | 0.219791 | 5.3:-19728232 | MS.gene069185:CDS |
| ACCTTCACCAACTACAAAAT+TGG | 0.225091 | 5.3:-19725984 | MS.gene069185:CDS |
| GCCAAAAGAATAACATTCTT+TGG | 0.240576 | 5.3:+19726783 | None:intergenic |
| CCAAAATTCTCCAGCTCTTC+AGG | 0.242891 | 5.3:+19728232 | None:intergenic |
| CTTACACTCTGGTTCCAATA+TGG | 0.243790 | 5.3:-19728011 | MS.gene069185:CDS |
| TCCAAAGAATGTTATTCTTT+TGG | 0.252662 | 5.3:-19726784 | MS.gene069185:CDS |
| CTGATATCTGGAATGCAATT+AGG | 0.263491 | 5.3:-19727635 | MS.gene069185:CDS |
| ATCGCCACCTTTGCCCATAT+TGG | 0.267671 | 5.3:+19727997 | None:intergenic |
| ACGGTTACATGGAAACTTTC+CGG | 0.288544 | 5.3:+19728183 | None:intergenic |
| TGAACGACCAATTCTTGAAT+TGG | 0.290588 | 5.3:-19728582 | MS.gene069185:CDS |
| CTGACTTTGATTCTGTTCTC+TGG | 0.294165 | 5.3:+19728556 | None:intergenic |
| GGATCTCCCTTCACCACCTT+TGG | 0.308079 | 5.3:+19730781 | None:intergenic |
| GGAGTTGAAGTTCCTGTATT+AGG | 0.311899 | 5.3:+19732828 | None:intergenic |
| AGTTGATTACTTGAATTCTT+TGG | 0.317106 | 5.3:-19729707 | MS.gene069185:CDS |
| TTGATCTTAATCTTGCTAGA+AGG | 0.332635 | 5.3:-19728129 | MS.gene069185:CDS |
| ATTGCTTCACTTCAAAAGAT+TGG | 0.333898 | 5.3:+19725918 | None:intergenic |
| GTAAATTATGATCAACCTTC+TGG | 0.338358 | 5.3:+19730749 | None:intergenic |
| TATTCTGATAAATCAGTTAC+AGG | 0.344858 | 5.3:-19727436 | MS.gene069185:intron |
| CTGGATCCCAATTCAAGAAT+TGG | 0.347042 | 5.3:+19728575 | None:intergenic |
| ACTTAGTTTGATGCGATTCC+CGG | 0.347489 | 5.3:+19726317 | None:intergenic |
| CTAATTGCATTCCAGATATC+AGG | 0.350357 | 5.3:+19727636 | None:intergenic |
| ACACATGGTAACTTTGCATT+TGG | 0.355254 | 5.3:+19726816 | None:intergenic |
| AATTGCAACTCCAATCAATT+AGG | 0.359410 | 5.3:-19732773 | MS.gene069185:intron |
| GCTCTCTTCTTTGGACTCTC+AGG | 0.378934 | 5.3:-19727971 | MS.gene069185:intron |
| GGGAGAAAGAGCCTGATATC+TGG | 0.386458 | 5.3:-19727647 | MS.gene069185:CDS |
| TAGAGACAAGCGTGTGGTTA+AGG | 0.386634 | 5.3:-19730114 | MS.gene069185:CDS |
| GGATAACTAACCGCATTGAT+AGG | 0.392059 | 5.3:+19726168 | None:intergenic |
| TCAACCTTCTGGCCCTTGGC+TGG | 0.394019 | 5.3:+19730760 | None:intergenic |
| ATCTGGAATGCAATTAGGTT+TGG | 0.396803 | 5.3:-19727630 | MS.gene069185:CDS |
| ATGGAGAGCCATGGTGCAAC+AGG | 0.406887 | 5.3:-19726474 | MS.gene069185:CDS |
| TAATCTTGCTAGAAGGGAAA+TGG | 0.408462 | 5.3:-19728122 | MS.gene069185:CDS |
| GATCATAATAGATATTTGAT+TGG | 0.411882 | 5.3:-19727750 | MS.gene069185:CDS |
| AGATATCAGGCTCTTTCTCC+CGG | 0.413843 | 5.3:+19727649 | None:intergenic |
| TTCTCCAGCTCTTCAGGACT+GGG | 0.416723 | 5.3:+19728238 | None:intergenic |
| TGGTACTGAGGATGGTATAA+AGG | 0.419919 | 5.3:-19726583 | MS.gene069185:CDS |
| CAGTATATCCACTGATGAAA+TGG | 0.420627 | 5.3:+19726700 | None:intergenic |
| TCCTCATCCATCTCAATGTT+AGG | 0.429129 | 5.3:+19729757 | None:intergenic |
| CAACACAGAACGGGAGCAAC+GGG | 0.434960 | 5.3:-19732977 | MS.gene069185:CDS |
| GTTCCTGTATTAGGTGTAGA+AGG | 0.436750 | 5.3:+19732837 | None:intergenic |
| AAGTGTTGCCATTGCTCCAT+TGG | 0.439666 | 5.3:+19730163 | None:intergenic |
| ATTCTCCAGCTCTTCAGGAC+TGG | 0.443936 | 5.3:+19728237 | None:intergenic |
| TTACACTCTGGTTCCAATAT+GGG | 0.446622 | 5.3:-19728010 | MS.gene069185:CDS |
| TTGGAGATGATGAACATTGT+TGG | 0.450977 | 5.3:-19727731 | MS.gene069185:CDS |
| GAACGACCAATTCTTGAATT+GGG | 0.451977 | 5.3:-19728581 | MS.gene069185:CDS |
| CAAGCGTGTGGTTAAGGATA+AGG | 0.452105 | 5.3:-19730108 | MS.gene069185:CDS |
| ATGATCAACCTTCTGGCCCT+TGG | 0.459806 | 5.3:+19730756 | None:intergenic |
| AGCATTGCAGCATACTTTGT+AGG | 0.462291 | 5.3:+19726507 | None:intergenic |
| CTCTACAATCTCTCCCCAGC+TGG | 0.470396 | 5.3:-19730661 | MS.gene069185:intron |
| TATTCACAATGGAAGCCTCC+TGG | 0.470980 | 5.3:-19726271 | MS.gene069185:CDS |
| TACTGAAAATGAACTTTGGT+GGG | 0.472517 | 5.3:-19730084 | MS.gene069185:CDS |
| GATGGATGAGGAGACTTTCA+TGG | 0.477834 | 5.3:-19729746 | MS.gene069185:CDS |
| GGAGTACGTACCTAATTGAT+TGG | 0.481844 | 5.3:+19732763 | None:intergenic |
| TATGTAGGTGGCTGGTACTG+AGG | 0.482389 | 5.3:-19726595 | MS.gene069185:intron |
| GGACACCCTCTACTTCAGTT+GGG | 0.483575 | 5.3:+19726208 | None:intergenic |
| ATTCACAATGGAAGCCTCCT+GGG | 0.488020 | 5.3:-19726270 | MS.gene069185:CDS |
| CGACACAGAAAAGTGTGAAC+GGG | 0.488678 | 5.3:-19732941 | MS.gene069185:CDS |
| AATGGTACATGGTCTGCGCC+AGG | 0.489790 | 5.3:+19726718 | None:intergenic |
| CTAAATGCATCGATCTCTCC+CGG | 0.489864 | 5.3:-19727668 | MS.gene069185:CDS |
| ACACTGGTTGGTCCGGTGGC+AGG | 0.490211 | 5.3:-19726440 | MS.gene069185:intron |
| CATATTGGAACCAGAGTGTA+AGG | 0.491290 | 5.3:+19728012 | None:intergenic |
| TCCTCGGCACACAATACGCC+GGG | 0.491543 | 5.3:-19728096 | MS.gene069185:CDS |
| GAAGTGTTGCAACACAGAAC+GGG | 0.493002 | 5.3:-19732986 | MS.gene069185:CDS |
| CAATGCGACATTGTTGAAGC+TGG | 0.493313 | 5.3:-19726033 | MS.gene069185:CDS |
| CTACTTCAGTTGGGGTCTGA+AGG | 0.499246 | 5.3:+19726217 | None:intergenic |
| AAGACCTTTCTTCATTTCCC+CGG | 0.500559 | 5.3:+19728078 | None:intergenic |
| AAGGAGAGAATTTGACGCTT+AGG | 0.500625 | 5.3:+19728031 | None:intergenic |
| AATTAATGCAGCTATGGTAC+CGG | 0.503007 | 5.3:-19726336 | MS.gene069185:intron |
| TGATCTTAATCTTGCTAGAA+GGG | 0.503025 | 5.3:-19728128 | MS.gene069185:CDS |
| CTTGTTAACACTGGTTGGTC+CGG | 0.504922 | 5.3:-19726447 | MS.gene069185:CDS |
| ACACTTTCTGGTGCCAAGAC+AGG | 0.508621 | 5.3:-19730146 | MS.gene069185:CDS |
| AGAATAACATTCTTTGGATG+AGG | 0.511311 | 5.3:+19726789 | None:intergenic |
| GCATTTGGTATGTACTCTAT+CGG | 0.512324 | 5.3:+19726831 | None:intergenic |
| TGATCAGAGAGAGTAGCAAA+TGG | 0.515175 | 5.3:+19732807 | None:intergenic |
| CATCAGTGGATATACTGCTC+TGG | 0.515676 | 5.3:-19726694 | MS.gene069185:intron |
| CCGACCCAGTCCTGAAGAGC+TGG | 0.516317 | 5.3:-19728242 | MS.gene069185:CDS |
| GCATTGCAGCATACTTTGTA+GGG | 0.518322 | 5.3:+19726508 | None:intergenic |
| ACAGAAGAGATTCTTGCAGC+TGG | 0.519195 | 5.3:-19725942 | MS.gene069185:CDS |
| CTTTCATGGTGAATAGAGAA+AGG | 0.519639 | 5.3:-19729732 | MS.gene069185:CDS |
| TCTAGGAGAACGACCTGTCT+TGG | 0.522767 | 5.3:+19730133 | None:intergenic |
| TGCAATGCTTGCTGAAAAGA+TGG | 0.522791 | 5.3:-19726493 | MS.gene069185:CDS |
| GCATCATTGACAAGAGAAAG+TGG | 0.524765 | 5.3:-19730805 | MS.gene069185:CDS |
| TTACTGAAAATGAACTTTGG+TGG | 0.525635 | 5.3:-19730085 | MS.gene069185:CDS |
| ACCAACTACAAAATTGGAAA+GGG | 0.529142 | 5.3:-19725978 | MS.gene069185:CDS |
| TGGTGTAGAACTATATGAGC+AGG | 0.531503 | 5.3:-19730219 | MS.gene069185:intron |
| AAGTGGACCAAAGGTGGTGA+AGG | 0.532921 | 5.3:-19730788 | MS.gene069185:CDS |
| TAGTGAGTGAAACGGTTACA+TGG | 0.534817 | 5.3:+19728172 | None:intergenic |
| TTAACCACACGCTTGTCTCT+AGG | 0.537668 | 5.3:+19730116 | None:intergenic |
| GCACCTTCTACACCTAATAC+AGG | 0.542170 | 5.3:-19732840 | MS.gene069185:CDS |
| GCATTGTATATAGTGAAGTC+CGG | 0.545860 | 5.3:+19728205 | None:intergenic |
| AATGCAATTAGGTTTGGTAC+AGG | 0.548007 | 5.3:-19727624 | MS.gene069185:intron |
| GGGACACCCTCTACTTCAGT+TGG | 0.548012 | 5.3:+19726207 | None:intergenic |
| GGATCATTCATCACTTCCAA+TGG | 0.548370 | 5.3:-19730179 | MS.gene069185:CDS |
| GAACATTGTTGGAGTGAGAA+TGG | 0.551621 | 5.3:-19727720 | MS.gene069185:CDS |
| ATTATTGATGCTATTCACAA+TGG | 0.551643 | 5.3:-19726282 | MS.gene069185:CDS |
| GCAACACAGAACGGGAGCAA+CGG | 0.552813 | 5.3:-19732978 | MS.gene069185:CDS |
| AGATCCAGCCAAGGGCCAGA+AGG | 0.555636 | 5.3:-19730764 | MS.gene069185:CDS |
| GACTTCACTATATACAATGC+CGG | 0.556176 | 5.3:-19728202 | MS.gene069185:CDS |
| AAAATGGCATCAAACGGAAA+CGG | 0.558552 | 5.3:-19733008 | MS.gene069185:CDS |
| CACCAACTACAAAATTGGAA+AGG | 0.562306 | 5.3:-19725979 | MS.gene069185:CDS |
| TTTCATGGTGAATAGAGAAA+GGG | 0.563156 | 5.3:-19729731 | MS.gene069185:CDS |
| GGAAGTGTTGCAACACAGAA+CGG | 0.563630 | 5.3:-19732987 | MS.gene069185:CDS |
| AGGTTACTGAAAATGAACTT+TGG | 0.564008 | 5.3:-19730088 | MS.gene069185:CDS |
| CAAATTCTCTCCTTACACTC+TGG | 0.566178 | 5.3:-19728022 | MS.gene069185:CDS |
| GTTAACACTGGTTGGTCCGG+TGG | 0.568391 | 5.3:-19726444 | MS.gene069185:CDS |
| GATATCAGGCTCTTTCTCCC+GGG | 0.569948 | 5.3:+19727650 | None:intergenic |
| CCCCGGCGTATTGTGTGCCG+AGG | 0.572139 | 5.3:+19728095 | None:intergenic |
| AAGTGAGTATAGTACCAGCT+GGG | 0.575051 | 5.3:+19730647 | None:intergenic |
| CAGGCGATAAAGTATGAGAA+AGG | 0.575852 | 5.3:-19730200 | MS.gene069185:CDS |
| GGGTTCTCCTAACATTGAGA+TGG | 0.576526 | 5.3:-19729764 | MS.gene069185:CDS |
| TGTTGTGCATGAACAATGAA+TGG | 0.579766 | 5.3:+19728512 | None:intergenic |
| ATAGGATCAAGAATTTCTGA+AGG | 0.581378 | 5.3:+19726186 | None:intergenic |
| TCAGACCCCAACTGAAGTAG+AGG | 0.582028 | 5.3:-19726214 | MS.gene069185:CDS |
| TCCTAACATTGAGATGGATG+AGG | 0.583346 | 5.3:-19729758 | MS.gene069185:CDS |
| ATGTCATGTAGTGAGTGAAA+CGG | 0.587227 | 5.3:+19728164 | None:intergenic |
| CATCACTTCCAATGGAGCAA+TGG | 0.588910 | 5.3:-19730171 | MS.gene069185:CDS |
| ACTGAAAATGAACTTTGGTG+GGG | 0.589502 | 5.3:-19730083 | MS.gene069185:CDS |
| GAACAATGAATGGTATGCTC+TGG | 0.589973 | 5.3:+19728522 | None:intergenic |
| GACAAGAGAAAGTGGACCAA+AGG | 0.590224 | 5.3:-19730797 | MS.gene069185:CDS |
| TTACTTGAATTCTTTGGACA+AGG | 0.593969 | 5.3:-19729701 | MS.gene069185:intron |
| AATGCAAAGTTACCATGTGT+TGG | 0.595409 | 5.3:-19726813 | MS.gene069185:CDS |
| ATTAATGCAGCTATGGTACC+GGG | 0.596656 | 5.3:-19726335 | MS.gene069185:intron |
| TGGTATGTACTCTATCGGAT+AGG | 0.597196 | 5.3:+19726836 | None:intergenic |
| AGAAGGGAAATGGTTATCCT+CGG | 0.598433 | 5.3:-19728112 | MS.gene069185:CDS |
| GATGGCTTGTTAACACTGGT+TGG | 0.601864 | 5.3:-19726452 | MS.gene069185:CDS |
| ATAACAACCACCTTCAATGT+TGG | 0.603993 | 5.3:+19727692 | None:intergenic |
| GGTTCCAATATGGGCAAAGG+TGG | 0.607153 | 5.3:-19728001 | MS.gene069185:CDS |
| TTCACAATGGAAGCCTCCTG+GGG | 0.607871 | 5.3:-19726269 | MS.gene069185:CDS |
| ATGGTACATGGTCTGCGCCA+GGG | 0.609620 | 5.3:+19726719 | None:intergenic |
| TACGCCGGGGAAATGAAGAA+AGG | 0.609823 | 5.3:-19728082 | MS.gene069185:CDS |
| TCCACTGATGAAATGGTACA+TGG | 0.610146 | 5.3:+19726707 | None:intergenic |
| CCAGCTCTTCAGGACTGGGT+CGG | 0.611651 | 5.3:+19728242 | None:intergenic |
| ACGACACAGAAAAGTGTGAA+CGG | 0.614816 | 5.3:-19732942 | MS.gene069185:CDS |
| GACACCCTCTACTTCAGTTG+GGG | 0.614848 | 5.3:+19726209 | None:intergenic |
| ATTATGATCAGTAGAAAGAG+TGG | 0.616425 | 5.3:+19727764 | None:intergenic |
| AGTGGACCAAAGGTGGTGAA+GGG | 0.616458 | 5.3:-19730787 | MS.gene069185:CDS |
| AAGATTAAGATCAATGCTAG+TGG | 0.617025 | 5.3:+19728138 | None:intergenic |
| TCTGGTTCCAATATGGGCAA+AGG | 0.620236 | 5.3:-19728004 | MS.gene069185:CDS |
| TTTGGATGAGGTCCAACACA+TGG | 0.620676 | 5.3:+19726801 | None:intergenic |
| AGAGCCATGGTGCAACAGGA+TGG | 0.624139 | 5.3:-19726470 | MS.gene069185:CDS |
| TAAATGCATCGATCTCTCCC+GGG | 0.625176 | 5.3:-19727667 | MS.gene069185:CDS |
| ACCATGTACCATTTCATCAG+TGG | 0.627912 | 5.3:-19726708 | MS.gene069185:CDS |
| CTGTCACTAACAGCAATGGT+TGG | 0.629050 | 5.3:+19730706 | None:intergenic |
| GCCAGGGTTAGCTTACTCAC+AGG | 0.631139 | 5.3:+19726735 | None:intergenic |
| AAGAGAAAGTGGACCAAAGG+TGG | 0.633631 | 5.3:-19730794 | MS.gene069185:CDS |
| GTGAAGGGAGATCCAGCCAA+GGG | 0.635150 | 5.3:-19730772 | MS.gene069185:CDS |
| AATGCGACATTGTTGAAGCT+GGG | 0.637634 | 5.3:-19726032 | MS.gene069185:CDS |
| AATGGTGTCTCCAACATTGA+AGG | 0.637962 | 5.3:-19727702 | MS.gene069185:CDS |
| CTAACAGCAATGGTTGGAGT+AGG | 0.638608 | 5.3:+19730712 | None:intergenic |
| GGTGAAGGGAGATCCAGCCA+AGG | 0.639716 | 5.3:-19730773 | MS.gene069185:CDS |
| ACTAAAAGCATACCTGCCAC+CGG | 0.640253 | 5.3:+19726428 | None:intergenic |
| AGCACTGTCACTAACAGCAA+TGG | 0.640876 | 5.3:+19730702 | None:intergenic |
| ATCCTCGGCACACAATACGC+CGG | 0.643837 | 5.3:-19728097 | MS.gene069185:CDS |
| TAGGTGGCTGGTACTGAGGA+TGG | 0.645802 | 5.3:-19726591 | MS.gene069185:CDS |
| TAGGATCAAGAATTTCTGAA+GGG | 0.654771 | 5.3:+19726187 | None:intergenic |
| ACCTGTGAGTAAGCTAACCC+TGG | 0.655761 | 5.3:-19726736 | MS.gene069185:CDS |
| CAAGCTGAAAATGTTGCTTG+TGG | 0.656547 | 5.3:+19726558 | None:intergenic |
| CAAGCCATCCTGTTGCACCA+TGG | 0.664526 | 5.3:+19726466 | None:intergenic |
| GCGACATTGTTGAAGCTGGG+TGG | 0.666561 | 5.3:-19726029 | MS.gene069185:CDS |
| ATTGTCAGTGTTGGAAAACG+TGG | 0.669949 | 5.3:-19727488 | MS.gene069185:intron |
| CAGACCCCAACTGAAGTAGA+GGG | 0.670526 | 5.3:-19726213 | MS.gene069185:CDS |
| AGTGAGTATAGTACCAGCTG+GGG | 0.682225 | 5.3:+19730648 | None:intergenic |
| ACAGGATGGCTTGTTAACAC+TGG | 0.686381 | 5.3:-19726456 | MS.gene069185:CDS |
| TTGGAGTAGGAACATGATGG+TGG | 0.693055 | 5.3:+19730725 | None:intergenic |
| CTGCAAGAATCTCTTCTGTG+AGG | 0.694213 | 5.3:+19725946 | None:intergenic |
| AGGGTTAGCTTACTCACAGG+TGG | 0.703538 | 5.3:+19726738 | None:intergenic |
| GGTGTCTCCAACATTGAAGG+TGG | 0.709321 | 5.3:-19727699 | MS.gene069185:CDS |
| GCTGAAAAGATGGAGAGCCA+TGG | 0.710111 | 5.3:-19726483 | MS.gene069185:CDS |
| GGGATTTGTCACGATGACAG+TGG | 0.723705 | 5.3:-19732921 | MS.gene069185:CDS |
| AATTCTTGATCCTATCAATG+CGG | 0.731649 | 5.3:-19726178 | MS.gene069185:intron |
| TCACAATGGAAGCCTCCTGG+GGG | 0.734115 | 5.3:-19726268 | MS.gene069185:CDS |
| TTCTCCTAGAGACAAGCGTG+TGG | 0.745257 | 5.3:-19730120 | MS.gene069185:CDS |
| TGGTTGGAGTAGGAACATGA+TGG | 0.745342 | 5.3:+19730722 | None:intergenic |
| CCTCGGCACACAATACGCCG+GGG | 0.757267 | 5.3:-19728095 | MS.gene069185:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 19725929 | 19733027 | 19725929 | ID=MS.gene069185 |
| chr5.3 | mRNA | 19725929 | 19733027 | 19725929 | ID=MS.gene069185.t1;Parent=MS.gene069185 |
| chr5.3 | exon | 19732774 | 19733027 | 19732774 | ID=MS.gene069185.t1.exon1;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19732774 | 19733027 | 19732774 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19730662 | 19730837 | 19730662 | ID=MS.gene069185.t1.exon2;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19730662 | 19730837 | 19730662 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19730080 | 19730233 | 19730080 | ID=MS.gene069185.t1.exon3;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19730080 | 19730233 | 19730080 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19729702 | 19729786 | 19729702 | ID=MS.gene069185.t1.exon4;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19729702 | 19729786 | 19729702 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19728511 | 19728611 | 19728511 | ID=MS.gene069185.t1.exon5;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19728511 | 19728611 | 19728511 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19727972 | 19728270 | 19727972 | ID=MS.gene069185.t1.exon6;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19727972 | 19728270 | 19727972 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19727625 | 19727798 | 19727625 | ID=MS.gene069185.t1.exon7;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19727625 | 19727798 | 19727625 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19727437 | 19727502 | 19727437 | ID=MS.gene069185.t1.exon8;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19727437 | 19727502 | 19727437 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19726695 | 19726873 | 19726695 | ID=MS.gene069185.t1.exon9;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19726695 | 19726873 | 19726695 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19726441 | 19726610 | 19726441 | ID=MS.gene069185.t1.exon10;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19726441 | 19726610 | 19726441 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19726179 | 19726347 | 19726179 | ID=MS.gene069185.t1.exon11;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19726179 | 19726347 | 19726179 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| chr5.3 | exon | 19725929 | 19726075 | 19725929 | ID=MS.gene069185.t1.exon12;Parent=MS.gene069185.t1 |
| chr5.3 | CDS | 19725929 | 19726075 | 19725929 | ID=cds.MS.gene069185.t1;Parent=MS.gene069185.t1 |
| Gene Sequence |
| Protein sequence |
