Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069558.t1 | AFK44182.1 | 100 | 167 | 0 | 0 | 1 | 167 | 1 | 167 | 5.60E-93 | 350.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069558.t1 | B7FIY1 | 100.0 | 167 | 0 | 0 | 1 | 167 | 1 | 167 | 4.0e-93 | 350.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061114 | MS.gene069558 | 0.813447 | 2.55E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069558.t1 | MTR_8g098735 | 100.000 | 167 | 0 | 0 | 1 | 167 | 1 | 167 | 6.24e-124 | 349 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069558.t1 | AT1G63830 | 82.530 | 166 | 29 | 0 | 2 | 167 | 3 | 168 | 7.41e-102 | 292 |
| MS.gene069558.t1 | AT1G63830 | 82.530 | 166 | 29 | 0 | 2 | 167 | 3 | 168 | 7.41e-102 | 292 |
| MS.gene069558.t1 | AT1G63830 | 82.530 | 166 | 29 | 0 | 2 | 167 | 3 | 168 | 7.41e-102 | 292 |
| MS.gene069558.t1 | AT4G23470 | 79.268 | 164 | 34 | 0 | 4 | 167 | 3 | 166 | 1.48e-98 | 285 |
| MS.gene069558.t1 | AT4G23470 | 79.268 | 164 | 34 | 0 | 4 | 167 | 3 | 166 | 2.18e-98 | 283 |
| MS.gene069558.t1 | AT5G41390 | 80.000 | 165 | 33 | 0 | 3 | 167 | 4 | 168 | 2.28e-98 | 285 |
| MS.gene069558.t1 | AT1G63830 | 81.875 | 160 | 29 | 0 | 2 | 161 | 3 | 162 | 1.05e-97 | 279 |
| MS.gene069558.t1 | AT1G63830 | 88.333 | 120 | 14 | 0 | 48 | 167 | 1 | 120 | 8.70e-75 | 222 |
| MS.gene069558.t1 | AT5G41390 | 84.545 | 110 | 17 | 0 | 58 | 167 | 1 | 110 | 1.24e-65 | 199 |
| MS.gene069558.t1 | AT4G23470 | 81.818 | 110 | 20 | 0 | 58 | 167 | 1 | 110 | 5.79e-62 | 190 |
| MS.gene069558.t1 | AT4G23470 | 81.818 | 110 | 20 | 0 | 58 | 167 | 1 | 110 | 7.95e-62 | 189 |
Find 35 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGGAAGTGAGGAAATTT+CGG | 0.298616 | 4.1:+5598680 | MS.gene069558:CDS |
| TGCAACTCCGGCAGAATTAC+CGG | 0.334750 | 4.1:+5593487 | MS.gene069558:CDS |
| ACCTTGACATATCATCATAA+AGG | 0.341368 | 4.1:-5594932 | None:intergenic |
| TTCTCAAATACTATCTTGTT+TGG | 0.350032 | 4.1:+5598707 | MS.gene069558:CDS |
| GGCAGAATTACCGGAATCTA+TGG | 0.355115 | 4.1:+5593496 | MS.gene069558:CDS |
| TCAGTACAGAGGCAAAATTC+AGG | 0.426098 | 4.1:-5595091 | None:intergenic |
| CCTTGACATATCATCATAAA+GGG | 0.442804 | 4.1:-5594931 | None:intergenic |
| TTCCTCACTTCCCACAATCA+TGG | 0.455138 | 4.1:-5598673 | None:intergenic |
| ATATGCATGCAACTTGGTTA+AGG | 0.460046 | 4.1:-5598638 | None:intergenic |
| TTCTCCACACCTACCACTGC+AGG | 0.479185 | 4.1:-5595059 | None:intergenic |
| CTCTATTGTTGCCATGATTG+TGG | 0.490690 | 4.1:+5598662 | MS.gene069558:CDS |
| GATCAGTGTGCCATAGATTC+CGG | 0.496322 | 4.1:-5593506 | None:intergenic |
| TCCAGATACACATGCTGTGC+TGG | 0.497369 | 4.1:+5595028 | MS.gene069558:intron |
| TCTATTGTTGCCATGATTGT+GGG | 0.521129 | 4.1:+5598663 | MS.gene069558:CDS |
| TGATCTCATGAGAACTATCC+AGG | 0.529386 | 4.1:+5593524 | MS.gene069558:CDS |
| TCTCTGCTTTGGAAATTCAG+TGG | 0.544883 | 4.1:+5598285 | MS.gene069558:CDS |
| TAGGGTGTGTGCGTGCATGC+AGG | 0.544903 | 4.1:+5598836 | MS.gene069558:intron |
| GTTACATGCCCTGCAGTGGT+AGG | 0.556389 | 4.1:+5595050 | MS.gene069558:CDS |
| TAGAGAATATGCATGCAACT+TGG | 0.557546 | 4.1:-5598644 | None:intergenic |
| ATCTTGAGAAAATGCAACTC+CGG | 0.559310 | 4.1:+5593475 | MS.gene069558:CDS |
| ATAGATTCCGGTAATTCTGC+CGG | 0.573475 | 4.1:-5593494 | None:intergenic |
| CAGATTGCTGCTTATCCTTG+TGG | 0.583603 | 4.1:+5593662 | MS.gene069558:intron |
| GCTTACATGGAGTATCGACC+TGG | 0.596144 | 4.1:-5593542 | None:intergenic |
| ATTGCTGCTTATCCTTGTGG+TGG | 0.597371 | 4.1:+5593665 | MS.gene069558:CDS |
| CCCTTTATGATGATATGTCA+AGG | 0.608347 | 4.1:+5594931 | MS.gene069558:CDS |
| CGAAGCAAGTATGATACACA+TGG | 0.611216 | 4.1:-5594900 | None:intergenic |
| GCTGGTTACATGCCCTGCAG+TGG | 0.628209 | 4.1:+5595046 | MS.gene069558:CDS |
| ATGCCCTGCAGTGGTAGGTG+TGG | 0.638395 | 4.1:+5595055 | MS.gene069558:CDS |
| GGGAAGTGAGGAAATTTCGG+AGG | 0.641644 | 4.1:+5598683 | MS.gene069558:CDS |
| TTGCAACAGAAAGCGAGTTG+AGG | 0.642740 | 4.1:-5598308 | None:intergenic |
| TCTCCACACCTACCACTGCA+GGG | 0.646565 | 4.1:-5595058 | None:intergenic |
| TGCCATGATTGTGGGAAGTG+AGG | 0.647664 | 4.1:+5598671 | MS.gene069558:CDS |
| AGTCTTACGAGCAGTAAACA+AGG | 0.662876 | 4.1:-5598734 | None:intergenic |
| GTTTATATACCTCAGTACAG+AGG | 0.692939 | 4.1:-5595102 | None:intergenic |
| ATGGATGACATACCACCACA+AGG | 0.728919 | 4.1:-5593677 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATTAATGATAGAAA+TGG | - | chr4.1:5593611-5593630 | None:intergenic | 10.0% |
| !!! | ATCAATAAAAAAAAGTATTT+TGG | - | chr4.1:5598570-5598589 | None:intergenic | 10.0% |
| !! | AACCTAAAATGAAAAAAAAA+AGG | - | chr4.1:5597733-5597752 | None:intergenic | 15.0% |
| !! | ACTATAAGGAAATTTAAAAA+CGG | - | chr4.1:5597263-5597282 | None:intergenic | 15.0% |
| !! | TATATATATTGAAGAGAAAA+GGG | - | chr4.1:5596321-5596340 | None:intergenic | 15.0% |
| !! | TATTTGAATATAGTTGTAAA+AGG | + | chr4.1:5597823-5597842 | MS.gene069558:intron | 15.0% |
| !!! | AACCTTTTTTTTTTCATTTT+AGG | + | chr4.1:5597728-5597747 | MS.gene069558:intron | 15.0% |
| !!! | ATATGCAATTTTTTTGTTTA+GGG | + | chr4.1:5598481-5598500 | MS.gene069558:intron | 15.0% |
| !!! | CAAATACTTTCAATTTTTAT+TGG | + | chr4.1:5596069-5596088 | MS.gene069558:intron | 15.0% |
| !!! | CAATAAAAATTGAAAGTATT+TGG | - | chr4.1:5596071-5596090 | None:intergenic | 15.0% |
| !! | AAAAGATGTACAATTAGAAA+TGG | - | chr4.1:5597290-5597309 | None:intergenic | 20.0% |
| !! | AAAGTCATATAATATGACTA+GGG | + | chr4.1:5595275-5595294 | MS.gene069558:intron | 20.0% |
| !! | ACCAAGATTTAATATTTGAA+AGG | + | chr4.1:5597423-5597442 | MS.gene069558:intron | 20.0% |
| !! | AGAAAGAAAATACATGTATA+GGG | + | chr4.1:5595311-5595330 | MS.gene069558:intron | 20.0% |
| !! | ATATATATTGAAGAGAAAAG+GGG | - | chr4.1:5596320-5596339 | None:intergenic | 20.0% |
| !! | ATTTATTTCATGATCAAATG+AGG | + | chr4.1:5597619-5597638 | MS.gene069558:intron | 20.0% |
| !! | CAGAACATTAAATTACTATT+AGG | - | chr4.1:5594862-5594881 | None:intergenic | 20.0% |
| !! | CTATATATATTGAAGAGAAA+AGG | - | chr4.1:5596322-5596341 | None:intergenic | 20.0% |
| !! | CTATTAGGAAAATAAGTAAT+AGG | - | chr4.1:5594847-5594866 | None:intergenic | 20.0% |
| !! | GTAACAATCAATATAAATAC+AGG | - | chr4.1:5594292-5594311 | None:intergenic | 20.0% |
| !! | TAAATACTATAGTTGAACAA+CGG | - | chr4.1:5597709-5597728 | None:intergenic | 20.0% |
| !! | TATGAATGAAATAAAGAGAT+GGG | - | chr4.1:5598402-5598421 | None:intergenic | 20.0% |
| !! | TCCTTTCAAATATTAAATCT+TGG | - | chr4.1:5597427-5597446 | None:intergenic | 20.0% |
| !! | TGAAAAACACAATAAAATGT+TGG | + | chr4.1:5594101-5594120 | MS.gene069558:intron | 20.0% |
| !!! | ACTGTTTTTATTGTTGTATT+TGG | + | chr4.1:5595386-5595405 | MS.gene069558:intron | 20.0% |
| !!! | AGTATATCCTTTGAAATTAT+AGG | + | chr4.1:5597230-5597249 | MS.gene069558:intron | 20.0% |
| !!! | ATTTAGTTCATTATCAACAA+TGG | - | chr4.1:5597598-5597617 | None:intergenic | 20.0% |
| !!! | CATATGCAATTTTTTTGTTT+AGG | + | chr4.1:5598480-5598499 | MS.gene069558:intron | 20.0% |
| !!! | CTATAAGTGAAACAATTTTT+TGG | + | chr4.1:5597855-5597874 | MS.gene069558:intron | 20.0% |
| !!! | CTGTTTTTATTGTTGTATTT+GGG | + | chr4.1:5595387-5595406 | MS.gene069558:intron | 20.0% |
| !!! | GATCTATACTTTTATTACTA+TGG | + | chr4.1:5595527-5595546 | MS.gene069558:intron | 20.0% |
| !!! | GTATATCCTTTGAAATTATA+GGG | + | chr4.1:5597231-5597250 | MS.gene069558:intron | 20.0% |
| !!! | TATTCTTTTGTAAGAAAAGA+GGG | + | chr4.1:5594388-5594407 | MS.gene069558:intron | 20.0% |
| !!! | TTATGTTTCTTTTGTTTGTA+GGG | + | chr4.1:5598818-5598837 | MS.gene069558:intron | 20.0% |
| !!! | TTATTCTTTTGTAAGAAAAG+AGG | + | chr4.1:5594387-5594406 | MS.gene069558:intron | 20.0% |
| !!! | TTTAAAACTTCTATCGTATT+AGG | + | chr4.1:5597366-5597385 | MS.gene069558:intron | 20.0% |
| ! | AAATACTATAGTTGAACAAC+GGG | - | chr4.1:5597708-5597727 | None:intergenic | 25.0% |
| ! | AATTGTCAATATTCTGTGAT+TGG | + | chr4.1:5596346-5596365 | MS.gene069558:intron | 25.0% |
| ! | AATTTCAAAGGATATACTAC+AGG | - | chr4.1:5597228-5597247 | None:intergenic | 25.0% |
| ! | ATTGCAATTTATCGTGAAAT+TGG | + | chr4.1:5596732-5596751 | MS.gene069558:intron | 25.0% |
| ! | ATTGTTCCCTATAATTTCAA+AGG | - | chr4.1:5597240-5597259 | None:intergenic | 25.0% |
| ! | ATTTAAGCTCATGCATAAAA+TGG | + | chr4.1:5595239-5595258 | MS.gene069558:intron | 25.0% |
| ! | CAAAGTCATATAATATGACT+AGG | + | chr4.1:5595274-5595293 | MS.gene069558:intron | 25.0% |
| ! | CATTGAAATCAGTGTTTATA+TGG | + | chr4.1:5596586-5596605 | MS.gene069558:intron | 25.0% |
| ! | GAGAAAGAAAATACATGTAT+AGG | + | chr4.1:5595310-5595329 | MS.gene069558:intron | 25.0% |
| ! | GATTAACTAATTTCCTGTTT+GGG | + | chr4.1:5597143-5597162 | MS.gene069558:intron | 25.0% |
| ! | GTATGAATGAAATAAAGAGA+TGG | - | chr4.1:5598403-5598422 | None:intergenic | 25.0% |
| ! | GTGTGTACTATGTAATAAAA+CGG | - | chr4.1:5595817-5595836 | None:intergenic | 25.0% |
| ! | TATATATTGAAGAGAAAAGG+GGG | - | chr4.1:5596319-5596338 | None:intergenic | 25.0% |
| ! | TGATTAACTAATTTCCTGTT+TGG | + | chr4.1:5597142-5597161 | MS.gene069558:intron | 25.0% |
| ! | TTCTCAAATACTATCTTGTT+TGG | + | chr4.1:5598707-5598726 | MS.gene069558:CDS | 25.0% |
| ! | TTGAATAACTGTTTGCTTAA+TGG | + | chr4.1:5593852-5593871 | MS.gene069558:intron | 25.0% |
| ! | TTTAAGCTCATGCATAAAAT+GGG | + | chr4.1:5595240-5595259 | MS.gene069558:intron | 25.0% |
| !! | ATAAAAGTATAGATCAGATG+AGG | - | chr4.1:5595522-5595541 | None:intergenic | 25.0% |
| !! | TAAAAGTATAGATCAGATGA+GGG | - | chr4.1:5595521-5595540 | None:intergenic | 25.0% |
| !! | TGATTGTTACTTGATTTAGT+CGG | + | chr4.1:5594302-5594321 | MS.gene069558:intron | 25.0% |
| !! | TGTGTTTATATGGTAGATTT+TGG | + | chr4.1:5596686-5596705 | MS.gene069558:intron | 25.0% |
| !! | TTCTTCTACATAGTTTTTGT+TGG | + | chr4.1:5595488-5595507 | MS.gene069558:intron | 25.0% |
| !! | TTTTCACTTCTCTCTTAATT+CGG | - | chr4.1:5596916-5596935 | None:intergenic | 25.0% |
| !!! | ATCTTGGTCAAGTTTTATAT+TGG | - | chr4.1:5597411-5597430 | None:intergenic | 25.0% |
| !!! | CATATAAACACTGATTTCAA+TGG | - | chr4.1:5596588-5596607 | None:intergenic | 25.0% |
| !!! | CTTATGTTTCTTTTGTTTGT+AGG | + | chr4.1:5598817-5598836 | MS.gene069558:intron | 25.0% |
| !!! | TCTTGGTCAAGTTTTATATT+GGG | - | chr4.1:5597410-5597429 | None:intergenic | 25.0% |
| AACATTTATGCCTCCTATTA+AGG | - | chr4.1:5594801-5594820 | None:intergenic | 30.0% | |
| AACATTTCATACAACTTCAC+CGG | + | chr4.1:5595748-5595767 | MS.gene069558:intron | 30.0% | |
| AAGTTGTATGAAATGTTGGA+TGG | - | chr4.1:5595745-5595764 | None:intergenic | 30.0% | |
| AATATTTGAAAGGAAACCTG+TGG | + | chr4.1:5597433-5597452 | MS.gene069558:intron | 30.0% | |
| AATTATTCAGCTTGATCAAC+TGG | - | chr4.1:5594368-5594387 | None:intergenic | 30.0% | |
| ACAAAGTACAAAGAGATACT+TGG | - | chr4.1:5594626-5594645 | None:intergenic | 30.0% | |
| ACCTTGACATATCATCATAA+AGG | - | chr4.1:5594935-5594954 | None:intergenic | 30.0% | |
| AGATCACTCTTATTCATAAG+AGG | - | chr4.1:5595969-5595988 | None:intergenic | 30.0% | |
| AGATGTACAATTAGAAATGG+TGG | - | chr4.1:5597287-5597306 | None:intergenic | 30.0% | |
| AGGATTGAAAATACACTTTC+AGG | + | chr4.1:5597646-5597665 | MS.gene069558:intron | 30.0% | |
| ATCAACAATGGCATAAAAAC+CGG | - | chr4.1:5597586-5597605 | None:intergenic | 30.0% | |
| ATTGAAAATACACTTTCAGG+TGG | + | chr4.1:5597649-5597668 | MS.gene069558:intron | 30.0% | |
| CAGGCATGTAAAAAAAAAGA+AGG | - | chr4.1:5595141-5595160 | None:intergenic | 30.0% | |
| CAGTTAGAAACATAACTGTT+AGG | - | chr4.1:5597189-5597208 | None:intergenic | 30.0% | |
| CATTAACTAAAGATCAGACA+GGG | + | chr4.1:5598168-5598187 | MS.gene069558:intron | 30.0% | |
| CCTTGACATATCATCATAAA+GGG | - | chr4.1:5594934-5594953 | None:intergenic | 30.0% | |
| CTAATCACCAAGTAATGAAT+CGG | - | chr4.1:5594731-5594750 | None:intergenic | 30.0% | |
| CTATGTAGAAGAAACTATCA+AGG | - | chr4.1:5595481-5595500 | None:intergenic | 30.0% | |
| CTTAAATCATGCAATGTCTA+AGG | - | chr4.1:5595226-5595245 | None:intergenic | 30.0% | |
| CTTCCTCTTTATAACAGAAT+TGG | + | chr4.1:5597042-5597061 | MS.gene069558:intron | 30.0% | |
| TAAAAAGAGTGATGAAAGTG+TGG | - | chr4.1:5593575-5593594 | None:intergenic | 30.0% | |
| TAACATTGTTCACCACATAA+TGG | + | chr4.1:5597108-5597127 | MS.gene069558:intron | 30.0% | |
| TAAGAGAAAGTAGAAAAGTG+TGG | + | chr4.1:5597960-5597979 | MS.gene069558:intron | 30.0% | |
| TAATCACCAAGTAATGAATC+GGG | - | chr4.1:5594730-5594749 | None:intergenic | 30.0% | |
| TACAAAGAGATACTTGGAAA+TGG | - | chr4.1:5594620-5594639 | None:intergenic | 30.0% | |
| TATACTGAAGCAAATTATGC+AGG | - | chr4.1:5595926-5595945 | None:intergenic | 30.0% | |
| TCAATGGACATTTATGAGTA+TGG | - | chr4.1:5596572-5596591 | None:intergenic | 30.0% | |
| TCTAACTGTAGGATGATTAA+AGG | + | chr4.1:5597201-5597220 | MS.gene069558:intron | 30.0% | |
| TGAATGAGCATCTAAATTCA+AGG | - | chr4.1:5594550-5594569 | None:intergenic | 30.0% | |
| TGACCAATTCTGTTATAAAG+AGG | - | chr4.1:5597048-5597067 | None:intergenic | 30.0% | |
| TTAAGCTCATGCATAAAATG+GGG | + | chr4.1:5595241-5595260 | MS.gene069558:intron | 30.0% | |
| TTATAAAGAGGAAGTGAAGA+GGG | - | chr4.1:5597036-5597055 | None:intergenic | 30.0% | |
| TTTCACTTCTCTCTTAATTC+GGG | - | chr4.1:5596915-5596934 | None:intergenic | 30.0% | |
| ! | ACAAACTGTGCAATTCATTT+TGG | - | chr4.1:5594980-5594999 | None:intergenic | 30.0% |
| ! | ACAGTTATGTTTCTAACTGT+AGG | + | chr4.1:5597190-5597209 | MS.gene069558:intron | 30.0% |
| ! | ATGACATTTTCCTATTAGCT+AGG | + | chr4.1:5595785-5595804 | MS.gene069558:intron | 30.0% |
| ! | CAGTTGATTGCAATTTTACT+TGG | + | chr4.1:5594775-5594794 | MS.gene069558:intron | 30.0% |
| ! | CATCTTTTATAGTGCTCTAA+CGG | + | chr4.1:5597302-5597321 | MS.gene069558:intron | 30.0% |
| ! | CGTTTATGGATTTTAGATCT+TGG | + | chr4.1:5593790-5593809 | MS.gene069558:intron | 30.0% |
| ! | GAAATACAGTTTGTTCAAGA+TGG | + | chr4.1:5597525-5597544 | MS.gene069558:intron | 30.0% |
| ! | TAGAAAAGTGTGGAGAAATT+TGG | + | chr4.1:5597970-5597989 | MS.gene069558:intron | 30.0% |
| ! | TGACATTTTCCTATTAGCTA+GGG | + | chr4.1:5595786-5595805 | MS.gene069558:intron | 30.0% |
| ! | TGTTTCACTTGAATTTTCTG+TGG | + | chr4.1:5598210-5598229 | MS.gene069558:intron | 30.0% |
| ! | TTAGAAATGGTGGAACTATA+AGG | - | chr4.1:5597277-5597296 | None:intergenic | 30.0% |
| !! | ATTGAAAGTATTTGGCATTG+TGG | - | chr4.1:5596063-5596082 | None:intergenic | 30.0% |
| !! | CAATGACTGAATTACTTTTG+TGG | + | chr4.1:5594214-5594233 | MS.gene069558:intron | 30.0% |
| !! | CTATTATGCATTGTTGTTTC+AGG | + | chr4.1:5598258-5598277 | MS.gene069558:intron | 30.0% |
| !! | CTTGGTCAAGTTTTATATTG+GGG | - | chr4.1:5597409-5597428 | None:intergenic | 30.0% |
| !! | GCAACACTGACTTATAAAAA+GGG | - | chr4.1:5596272-5596291 | None:intergenic | 30.0% |
| !! | TGAAACAAACACTAGCTTTA+AGG | - | chr4.1:5598197-5598216 | None:intergenic | 30.0% |
| !!! | AGTTTTAGATACTTGGACAA+TGG | + | chr4.1:5596537-5596556 | MS.gene069558:intron | 30.0% |
| !!! | CAATTTTACTTGGCCTTAAT+AGG | + | chr4.1:5594785-5594804 | MS.gene069558:intron | 30.0% |
| !!! | CATGTTCAGTTTTAGATACT+TGG | + | chr4.1:5596530-5596549 | MS.gene069558:intron | 30.0% |
| AAACATAACTGTTAGGTGAC+TGG | - | chr4.1:5597182-5597201 | None:intergenic | 35.0% | |
| AAAGTGTGGAGAAATTTGGA+GGG | + | chr4.1:5597974-5597993 | MS.gene069558:intron | 35.0% | |
| AACAACAGAGACTCAAATTG+CGG | - | chr4.1:5596448-5596467 | None:intergenic | 35.0% | |
| AAGAAACTATCAAGGCTTAG+AGG | - | chr4.1:5595473-5595492 | None:intergenic | 35.0% | |
| ACCATATAAACACACCATTG+CGG | - | chr4.1:5596680-5596699 | None:intergenic | 35.0% | |
| AGAATGTTGCTCTTGATGTA+TGG | - | chr4.1:5595681-5595700 | None:intergenic | 35.0% | |
| AGTAAATAAACGCCCTTGAA+AGG | - | chr4.1:5596185-5596204 | None:intergenic | 35.0% | |
| AGTGCAGAAAATCTACAAAC+AGG | - | chr4.1:5598083-5598102 | None:intergenic | 35.0% | |
| ATATGCATGCAACTTGGTTA+AGG | - | chr4.1:5598519-5598538 | None:intergenic | 35.0% | |
| ATCTTGAGAAAATGCAACTC+CGG | + | chr4.1:5593475-5593494 | MS.gene069558:CDS | 35.0% | |
| ATGAAATAAAGAGATGGGAG+TGG | - | chr4.1:5598397-5598416 | None:intergenic | 35.0% | |
| ATGATCACACATGTCAGTAT+TGG | - | chr4.1:5593976-5593995 | None:intergenic | 35.0% | |
| ATTGTGCACGTTATAGTGAA+CGG | + | chr4.1:5598782-5598801 | MS.gene069558:intron | 35.0% | |
| ATTGTGGCAAAGATTAACAC+TGG | - | chr4.1:5596047-5596066 | None:intergenic | 35.0% | |
| CCAAAATGATAGATCACAAG+CGG | - | chr4.1:5594689-5594708 | None:intergenic | 35.0% | |
| CCATTAACTAAAGATCAGAC+AGG | + | chr4.1:5598167-5598186 | MS.gene069558:intron | 35.0% | |
| CCCTTTATGATGATATGTCA+AGG | + | chr4.1:5594931-5594950 | MS.gene069558:CDS | 35.0% | |
| CCTGTCTGATCTTTAGTTAA+TGG | - | chr4.1:5598170-5598189 | None:intergenic | 35.0% | |
| CTTCAGTATAAACCTCTAGT+CGG | + | chr4.1:5595936-5595955 | MS.gene069558:intron | 35.0% | |
| GAGATCTGAAAAGAGAGTTA+TGG | - | chr4.1:5593699-5593718 | None:intergenic | 35.0% | |
| GGTGAAGTTGTATGAAATGT+TGG | - | chr4.1:5595749-5595768 | None:intergenic | 35.0% | |
| GTACTAGATGAGTTAGACTT+GGG | - | chr4.1:5595656-5595675 | None:intergenic | 35.0% | |
| GTATGAATATGCATGCAACT+TGG | - | chr4.1:5598525-5598544 | None:intergenic | 35.0% | |
| GTGCAGAAAATCTACAAACA+GGG | - | chr4.1:5598082-5598101 | None:intergenic | 35.0% | |
| GTTATAAAGAGGAAGTGAAG+AGG | - | chr4.1:5597037-5597056 | None:intergenic | 35.0% | |
| GTTTATATACCTCAGTACAG+AGG | - | chr4.1:5595105-5595124 | None:intergenic | 35.0% | |
| TAGAGAATATGCATGCAACT+TGG | - | chr4.1:5598647-5598666 | None:intergenic | 35.0% | |
| TATAATATGACTAGGGCAAG+AGG | + | chr4.1:5595282-5595301 | MS.gene069558:intron | 35.0% | |
| TCAGATAGAACCTTAGAGAT+GGG | - | chr4.1:5596991-5597010 | None:intergenic | 35.0% | |
| TCATGATCAAATGAGGACAT+AGG | + | chr4.1:5597626-5597645 | MS.gene069558:intron | 35.0% | |
| TCTATTGTTGCCATGATTGT+GGG | + | chr4.1:5598663-5598682 | MS.gene069558:CDS | 35.0% | |
| TGAAATAAAGAGATGGGAGT+GGG | - | chr4.1:5598396-5598415 | None:intergenic | 35.0% | |
| TGCAGAAAATCTACAAACAG+GGG | - | chr4.1:5598081-5598100 | None:intergenic | 35.0% | |
| TGCCATATGATTGAGTGTAT+CGG | + | chr4.1:5596092-5596111 | MS.gene069558:intron | 35.0% | |
| TGCTGTTAAATCGTCGTTTA+TGG | + | chr4.1:5593776-5593795 | MS.gene069558:intron | 35.0% | |
| TGGTGAACAATGTTATGAGA+AGG | - | chr4.1:5597103-5597122 | None:intergenic | 35.0% | |
| TTCAGATAGAACCTTAGAGA+TGG | - | chr4.1:5596992-5597011 | None:intergenic | 35.0% | |
| TTGTAAGAAAAGAGGGTAGT+GGG | + | chr4.1:5594395-5594414 | MS.gene069558:intron | 35.0% | |
| TTGTGGCAAAGATTAACACT+GGG | - | chr4.1:5596046-5596065 | None:intergenic | 35.0% | |
| TTTGTAAGAAAAGAGGGTAG+TGG | + | chr4.1:5594394-5594413 | MS.gene069558:intron | 35.0% | |
| ! | AAAAGTGTGGAGAAATTTGG+AGG | + | chr4.1:5597973-5597992 | MS.gene069558:intron | 35.0% |
| ! | AATCATCTTTTCTACCGTAG+GGG | + | chr4.1:5595599-5595618 | MS.gene069558:intron | 35.0% |
| ! | AGTTTGTTCAAGATGGAGAA+TGG | + | chr4.1:5597532-5597551 | MS.gene069558:intron | 35.0% |
| ! | CAATCATCTTTTCTACCGTA+GGG | + | chr4.1:5595598-5595617 | MS.gene069558:intron | 35.0% |
| ! | GATTCACTATCCTTTAAGGA+GGG | - | chr4.1:5598054-5598073 | None:intergenic | 35.0% |
| ! | GCAATTGGTTAACAAGGTTT+TGG | + | chr4.1:5597499-5597518 | MS.gene069558:intron | 35.0% |
| ! | GTTTTCTTCAAGAGTAGGTT+CGG | + | chr4.1:5595183-5595202 | MS.gene069558:intron | 35.0% |
| ! | TCAATCATCTTTTCTACCGT+AGG | + | chr4.1:5595597-5595616 | MS.gene069558:intron | 35.0% |
| ! | TTGTTTCACTTATAGCTCTG+AGG | - | chr4.1:5597850-5597869 | None:intergenic | 35.0% |
| ! | TTTTCTTCAAGAGTAGGTTC+GGG | + | chr4.1:5595184-5595203 | MS.gene069558:intron | 35.0% |
| !! | AAACTGGATTTTGAGAAAGC+TGG | + | chr4.1:5597460-5597479 | MS.gene069558:intron | 35.0% |
| !! | GGCAACACTGACTTATAAAA+AGG | - | chr4.1:5596273-5596292 | None:intergenic | 35.0% |
| !! | TAGAATTTTGATAGCCCCTA+CGG | - | chr4.1:5595616-5595635 | None:intergenic | 35.0% |
| !! | TGCATCGTTTTAAGTAGATG+AGG | + | chr4.1:5594067-5594086 | MS.gene069558:intron | 35.0% |
| !!! | AAGGTTTTTTGGGGATAGAT+TGG | + | chr4.1:5596238-5596257 | MS.gene069558:intron | 35.0% |
| !!! | AATTTTTTGGACCTCGTTTG+GGG | + | chr4.1:5597868-5597887 | MS.gene069558:intron | 35.0% |
| !!! | ACAATTTTTTGGACCTCGTT+TGG | + | chr4.1:5597866-5597885 | MS.gene069558:intron | 35.0% |
| !!! | AGACAGTTGAAGGTTTTTTG+GGG | + | chr4.1:5596229-5596248 | MS.gene069558:intron | 35.0% |
| !!! | AGGTTTTTTGGGGATAGATT+GGG | + | chr4.1:5596239-5596258 | MS.gene069558:intron | 35.0% |
| !!! | CAATTTTTTGGACCTCGTTT+GGG | + | chr4.1:5597867-5597886 | MS.gene069558:intron | 35.0% |
| !!! | CAGACAGTTGAAGGTTTTTT+GGG | + | chr4.1:5596228-5596247 | MS.gene069558:intron | 35.0% |
| !!! | TCAGACAGTTGAAGGTTTTT+TGG | + | chr4.1:5596227-5596246 | MS.gene069558:intron | 35.0% |
| !!! | TTTCAGGTTTTTCTCTGCTT+TGG | + | chr4.1:5598274-5598293 | MS.gene069558:intron | 35.0% |
| !!! | TTTTACTTGGCCTTAATAGG+AGG | + | chr4.1:5594788-5594807 | MS.gene069558:intron | 35.0% |
| AAAATCTACAAACAGGGGCT+GGG | - | chr4.1:5598076-5598095 | None:intergenic | 40.0% | |
| AACATAGAGACCCACAGTTA+CGG | - | chr4.1:5597916-5597935 | None:intergenic | 40.0% | |
| AACTGTGGGTCTCTATGTTT+GGG | + | chr4.1:5597917-5597936 | MS.gene069558:intron | 40.0% | |
| ACAACAGAGACTCAAATTGC+GGG | - | chr4.1:5596447-5596466 | None:intergenic | 40.0% | |
| ACAATGTTGTGGAGACAAAG+CGG | - | chr4.1:5596485-5596504 | None:intergenic | 40.0% | |
| AGAGAGATAGAGAGAAAGGT+AGG | + | chr4.1:5598021-5598040 | MS.gene069558:intron | 40.0% | |
| AGTATAGATCAGATGAGGGT+AGG | - | chr4.1:5595517-5595536 | None:intergenic | 40.0% | |
| AGTCTTACGAGCAGTAAACA+AGG | - | chr4.1:5598737-5598756 | None:intergenic | 40.0% | |
| ATAAGTCAGTGTTGCCTAAC+TGG | + | chr4.1:5596277-5596296 | MS.gene069558:intron | 40.0% | |
| ATAGATTCCGGTAATTCTGC+CGG | - | chr4.1:5593497-5593516 | None:intergenic | 40.0% | |
| ATATCTGCAAATGCTGCCAT+GGG | + | chr4.1:5595161-5595180 | MS.gene069558:intron | 40.0% | |
| ATATTGAAGAGAAAAGGGGG+AGG | - | chr4.1:5596316-5596335 | None:intergenic | 40.0% | |
| ATCCCTTTGCAAATAGCCTA+TGG | - | chr4.1:5596629-5596648 | None:intergenic | 40.0% | |
| ATTAGGAATGTTTGGACGCT+AGG | + | chr4.1:5597336-5597355 | MS.gene069558:intron | 40.0% | |
| CAATGACCCGATTCATTACT+TGG | + | chr4.1:5594721-5594740 | MS.gene069558:intron | 40.0% | |
| CACAACATTGTACCAGTGTA+TGG | + | chr4.1:5596494-5596513 | MS.gene069558:intron | 40.0% | |
| CACATCGAGCAATCTTTAGA+TGG | + | chr4.1:5594266-5594285 | MS.gene069558:intron | 40.0% | |
| CATACACTGGTACAATGTTG+TGG | - | chr4.1:5596496-5596515 | None:intergenic | 40.0% | |
| CATCAACAAGAACCATACAC+TGG | - | chr4.1:5596509-5596528 | None:intergenic | 40.0% | |
| CATCTAAAGATTGCTCGATG+TGG | - | chr4.1:5594268-5594287 | None:intergenic | 40.0% | |
| CGAAGCAAGTATGATACACA+TGG | - | chr4.1:5594903-5594922 | None:intergenic | 40.0% | |
| CGTACTAGATGAGTTAGACT+TGG | - | chr4.1:5595657-5595676 | None:intergenic | 40.0% | |
| CTACTCTTGAAGAAAACCCA+TGG | - | chr4.1:5595180-5595199 | None:intergenic | 40.0% | |
| CTCTATTGTTGCCATGATTG+TGG | + | chr4.1:5598662-5598681 | MS.gene069558:CDS | 40.0% | |
| CTGGGATTCACTATCCTTTA+AGG | - | chr4.1:5598058-5598077 | None:intergenic | 40.0% | |
| CTGTTGGCAATTGGTTAACA+AGG | + | chr4.1:5597493-5597512 | MS.gene069558:intron | 40.0% | |
| CTTTCCTCGTTTCCTTTCAA+GGG | + | chr4.1:5596170-5596189 | MS.gene069558:intron | 40.0% | |
| GACCGATACACTCAATCATA+TGG | - | chr4.1:5596097-5596116 | None:intergenic | 40.0% | |
| GAGAGTAATACCAGAGATAG+AGG | - | chr4.1:5596855-5596874 | None:intergenic | 40.0% | |
| GATGAGAGAGATAGAGAGAA+AGG | + | chr4.1:5598017-5598036 | MS.gene069558:intron | 40.0% | |
| GATTAGGATTCCGTAACTGT+GGG | + | chr4.1:5597903-5597922 | MS.gene069558:intron | 40.0% | |
| GCGTCCAAACATTCCTAATT+AGG | - | chr4.1:5597335-5597354 | None:intergenic | 40.0% | |
| GGATCATTTCTGTTGGCAAT+TGG | + | chr4.1:5597484-5597503 | MS.gene069558:intron | 40.0% | |
| GGTGAAAAATAAGGCCAGTT+AGG | - | chr4.1:5596294-5596313 | None:intergenic | 40.0% | |
| GTGGCCTAATTAGGAATGTT+TGG | + | chr4.1:5597328-5597347 | MS.gene069558:intron | 40.0% | |
| GTTCACCACATAATGGTCTT+GGG | + | chr4.1:5597115-5597134 | MS.gene069558:intron | 40.0% | |
| TAACGGTAAGTGGCCTAATT+AGG | + | chr4.1:5597319-5597338 | MS.gene069558:intron | 40.0% | |
| TAACTGTGGGTCTCTATGTT+TGG | + | chr4.1:5597916-5597935 | MS.gene069558:intron | 40.0% | |
| TAAGAGTGATCTTCATGTCG+TGG | + | chr4.1:5595977-5595996 | MS.gene069558:intron | 40.0% | |
| TATAGTGCTCTAACGGTAAG+TGG | + | chr4.1:5597309-5597328 | MS.gene069558:intron | 40.0% | |
| TATTGAAGAGAAAAGGGGGA+GGG | - | chr4.1:5596315-5596334 | None:intergenic | 40.0% | |
| TCAGTACAGAGGCAAAATTC+AGG | - | chr4.1:5595094-5595113 | None:intergenic | 40.0% | |
| TGATCTCATGAGAACTATCC+AGG | + | chr4.1:5593524-5593543 | MS.gene069558:CDS | 40.0% | |
| TGGATGGCAAAATGTCAACA+CGG | - | chr4.1:5595729-5595748 | None:intergenic | 40.0% | |
| TGTACACCATAGGATTCAAG+CGG | - | chr4.1:5595881-5595900 | None:intergenic | 40.0% | |
| TGTGGGAAGTGAGGAAATTT+CGG | + | chr4.1:5598680-5598699 | MS.gene069558:CDS | 40.0% | |
| TGTTCACCACATAATGGTCT+TGG | + | chr4.1:5597114-5597133 | MS.gene069558:intron | 40.0% | |
| TTACTCTCTCCCTTCAAAAC+CGG | + | chr4.1:5596867-5596886 | MS.gene069558:intron | 40.0% | |
| TTAGGAATGTTTGGACGCTA+GGG | + | chr4.1:5597337-5597356 | MS.gene069558:intron | 40.0% | |
| ! | AAGAGTGATGAAAGTGTGGT+TGG | - | chr4.1:5593571-5593590 | None:intergenic | 40.0% |
| ! | ACCATGGAGTTTCTTTTCAC+CGG | + | chr4.1:5597564-5597583 | MS.gene069558:intron | 40.0% |
| ! | ACTATCCTTTAAGGAGGGAA+TGG | - | chr4.1:5598049-5598068 | None:intergenic | 40.0% |
| ! | CAGGTATTGTGAGTGATAGA+GGG | - | chr4.1:5595907-5595926 | None:intergenic | 40.0% |
| ! | CATGGGTTTTCTTCAAGAGT+AGG | + | chr4.1:5595178-5595197 | MS.gene069558:intron | 40.0% |
| ! | CATTTTCCTATTAGCTAGGG+CGG | + | chr4.1:5595789-5595808 | MS.gene069558:intron | 40.0% |
| ! | CCGCTTGTGATCTATCATTT+TGG | + | chr4.1:5594686-5594705 | MS.gene069558:intron | 40.0% |
| ! | CTCATTTATAGCCTTACCTC+TGG | + | chr4.1:5596203-5596222 | MS.gene069558:intron | 40.0% |
| ! | CTGCAAAGAACTTTTGCCTT+TGG | + | chr4.1:5596766-5596785 | MS.gene069558:intron | 40.0% |
| ! | GAAAATACACTTTCAGGTGG+TGG | + | chr4.1:5597652-5597671 | MS.gene069558:intron | 40.0% |
| ! | GCAATCAACTGAAAGTGCAT+TGG | - | chr4.1:5594766-5594785 | None:intergenic | 40.0% |
| ! | GGATTCACTATCCTTTAAGG+AGG | - | chr4.1:5598055-5598074 | None:intergenic | 40.0% |
| ! | TCGTTTGGGGTTTGTTTGTA+GGG | + | chr4.1:5597881-5597900 | MS.gene069558:intron | 40.0% |
| ! | TCTATGTTTGGGGTGACTTT+AGG | + | chr4.1:5597928-5597947 | MS.gene069558:intron | 40.0% |
| ! | TGAATTTTGCCTCTGTACTG+AGG | + | chr4.1:5595093-5595112 | MS.gene069558:CDS | 40.0% |
| !! | GACGTTTTGAGCATGTATTG+AGG | - | chr4.1:5595566-5595585 | None:intergenic | 40.0% |
| !! | TAGATGAGAGGTGGATTGTA+CGG | - | chr4.1:5596146-5596165 | None:intergenic | 40.0% |
| !! | TCTCTGCTTTGGAAATTCAG+TGG | + | chr4.1:5598285-5598304 | MS.gene069558:CDS | 40.0% |
| !!! | AGATTTTTAGCAACCGCCAT+AGG | + | chr4.1:5596610-5596629 | MS.gene069558:intron | 40.0% |
| AAAGAGGAAGTGAAGAGGGA+GGG | - | chr4.1:5597032-5597051 | None:intergenic | 45.0% | |
| AACTGTCTGAACCAGAGGTA+AGG | - | chr4.1:5596217-5596236 | None:intergenic | 45.0% | |
| AAGGCTTAGAGGTCAGTGTT+TGG | - | chr4.1:5595462-5595481 | None:intergenic | 45.0% | |
| AAGGGGGAGGGTGAAAAATA+AGG | - | chr4.1:5596303-5596322 | None:intergenic | 45.0% | |
| ACACCTTTGATCAGAGGAGT+TGG | - | chr4.1:5593935-5593954 | None:intergenic | 45.0% | |
| ACCAGAGATAGAGGACATGT+GGG | - | chr4.1:5596846-5596865 | None:intergenic | 45.0% | |
| ACCGGTGAAAAGAAACTCCA+TGG | - | chr4.1:5597568-5597587 | None:intergenic | 45.0% | |
| ACTGTGGGTCTCTATGTTTG+GGG | + | chr4.1:5597918-5597937 | MS.gene069558:intron | 45.0% | |
| AGAATGGAGAATCTGCACCA+TGG | + | chr4.1:5597548-5597567 | MS.gene069558:intron | 45.0% | |
| AGACCAATTGCTAGTCCCAT+TGG | - | chr4.1:5596376-5596395 | None:intergenic | 45.0% | |
| AGCTGGAGGATCATTTCTGT+TGG | + | chr4.1:5597477-5597496 | MS.gene069558:intron | 45.0% | |
| AGGTACCATTCCCTCCTTAA+AGG | + | chr4.1:5598041-5598060 | MS.gene069558:intron | 45.0% | |
| AGGTGACTGGATGAGAATGT+GGG | - | chr4.1:5597169-5597188 | None:intergenic | 45.0% | |
| ATAAAGAGATGGGAGTGGGA+AGG | - | chr4.1:5598392-5598411 | None:intergenic | 45.0% | |
| ATCCCATCACATTCTGATGC+TGG | - | chr4.1:5596411-5596430 | None:intergenic | 45.0% | |
| ATCGGGTCATTGAACTGACA+AGG | - | chr4.1:5594713-5594732 | None:intergenic | 45.0% | |
| ATGAGAAGGTGACATAGCAG+AGG | - | chr4.1:5597089-5597108 | None:intergenic | 45.0% | |
| ATGGATGACATACCACCACA+AGG | - | chr4.1:5593680-5593699 | None:intergenic | 45.0% | |
| ATGGTACCACAACTCAATGG+CGG | - | chr4.1:5596654-5596673 | None:intergenic | 45.0% | |
| ATTAACACTGGGAGTTCACG+AGG | - | chr4.1:5596035-5596054 | None:intergenic | 45.0% | |
| CACCAGCATCAGAATGTGAT+GGG | + | chr4.1:5596406-5596425 | MS.gene069558:intron | 45.0% | |
| CCTATGGTACCACAACTCAA+TGG | - | chr4.1:5596657-5596676 | None:intergenic | 45.0% | |
| CCTTGAAAGGAAACGAGGAA+AGG | - | chr4.1:5596172-5596191 | None:intergenic | 45.0% | |
| CCTTTCCTCGTTTCCTTTCA+AGG | + | chr4.1:5596169-5596188 | MS.gene069558:intron | 45.0% | |
| CCTTTGCAAATAGCCTATGG+CGG | - | chr4.1:5596626-5596645 | None:intergenic | 45.0% | |
| CGCCATAGGCTATTTGCAAA+GGG | + | chr4.1:5596624-5596643 | MS.gene069558:intron | 45.0% | |
| CGGAGACAGGTTATACAAGT+TGG | - | chr4.1:5594669-5594688 | None:intergenic | 45.0% | |
| CTACAAACAAACCCCAAACG+AGG | - | chr4.1:5597882-5597901 | None:intergenic | 45.0% | |
| GAAAATCTACAAACAGGGGC+TGG | - | chr4.1:5598077-5598096 | None:intergenic | 45.0% | |
| GAAAGGAGATAGATGAGAGG+TGG | - | chr4.1:5596155-5596174 | None:intergenic | 45.0% | |
| GACCAATTGCTAGTCCCATT+GGG | - | chr4.1:5596375-5596394 | None:intergenic | 45.0% | |
| GAGGAAAGGAGATAGATGAG+AGG | - | chr4.1:5596158-5596177 | None:intergenic | 45.0% | |
| GATAGAACCTTAGAGATGGG+AGG | - | chr4.1:5596988-5597007 | None:intergenic | 45.0% | |
| GATAGTACACTGCGTCTGTT+TGG | + | chr4.1:5594580-5594599 | MS.gene069558:intron | 45.0% | |
| GATATCTGCAAATGCTGCCA+TGG | + | chr4.1:5595160-5595179 | MS.gene069558:intron | 45.0% | |
| GATCAGTGTGCCATAGATTC+CGG | - | chr4.1:5593509-5593528 | None:intergenic | 45.0% | |
| GCCGCAATGGTGTGTTTATA+TGG | + | chr4.1:5596676-5596695 | MS.gene069558:intron | 45.0% | |
| GGATGGCAAAATGTCAACAC+GGG | - | chr4.1:5595728-5595747 | None:intergenic | 45.0% | |
| GGATTAGGATTCCGTAACTG+TGG | + | chr4.1:5597902-5597921 | MS.gene069558:intron | 45.0% | |
| GGCAGAATTACCGGAATCTA+TGG | + | chr4.1:5593496-5593515 | MS.gene069558:CDS | 45.0% | |
| GTACACCATAGGATTCAAGC+GGG | - | chr4.1:5595880-5595899 | None:intergenic | 45.0% | |
| GTCATCGTAGACTGTAAGAC+CGG | - | chr4.1:5595770-5595789 | None:intergenic | 45.0% | |
| TAAAGAGATGGGAGTGGGAA+GGG | - | chr4.1:5598391-5598410 | None:intergenic | 45.0% | |
| TAAAGAGGAAGTGAAGAGGG+AGG | - | chr4.1:5597033-5597052 | None:intergenic | 45.0% | |
| TACACCATAGGATTCAAGCG+GGG | - | chr4.1:5595879-5595898 | None:intergenic | 45.0% | |
| TACCAGAGATAGAGGACATG+TGG | - | chr4.1:5596847-5596866 | None:intergenic | 45.0% | |
| TAGAGGGAGATGTACACCAT+AGG | - | chr4.1:5595891-5595910 | None:intergenic | 45.0% | |
| TAGGTGACTGGATGAGAATG+TGG | - | chr4.1:5597170-5597189 | None:intergenic | 45.0% | |
| TCGGGTCATTGAACTGACAA+GGG | - | chr4.1:5594712-5594731 | None:intergenic | 45.0% | |
| TCTCAGTCATGCGATAGTCA+GGG | + | chr4.1:5594506-5594525 | MS.gene069558:intron | 45.0% | |
| TGACTATCGCATGACTGAGA+AGG | - | chr4.1:5594506-5594525 | None:intergenic | 45.0% | |
| TGAGAAGGCTGATAAGCTCA+AGG | - | chr4.1:5594491-5594510 | None:intergenic | 45.0% | |
| TGAGAAGGTGACATAGCAGA+GGG | - | chr4.1:5597088-5597107 | None:intergenic | 45.0% | |
| TGATCGTAATGTGCTTCCCT+TGG | + | chr4.1:5594463-5594482 | MS.gene069558:intron | 45.0% | |
| TGGCAGCATTTGCAGATATC+AGG | - | chr4.1:5595160-5595179 | None:intergenic | 45.0% | |
| TGTCAATTCATCCAACCAGC+CGG | - | chr4.1:5596889-5596908 | None:intergenic | 45.0% | |
| TGTGGAGACAAAGCGGAAAT+TGG | - | chr4.1:5596478-5596497 | None:intergenic | 45.0% | |
| TTAACACTGGGAGTTCACGA+GGG | - | chr4.1:5596034-5596053 | None:intergenic | 45.0% | |
| TTCCTCACTTCCCACAATCA+TGG | - | chr4.1:5598676-5598695 | None:intergenic | 45.0% | |
| TTCTCAGTCATGCGATAGTC+AGG | + | chr4.1:5594505-5594524 | MS.gene069558:intron | 45.0% | |
| TTGCAACAGAAAGCGAGTTG+AGG | - | chr4.1:5598311-5598330 | None:intergenic | 45.0% | |
| ! | ACTAGCAATTGGTCTGTTCC+TGG | + | chr4.1:5596381-5596400 | MS.gene069558:intron | 45.0% |
| ! | ACTCCTCTGATCAAAGGTGT+CGG | + | chr4.1:5593935-5593954 | MS.gene069558:intron | 45.0% |
| ! | ATCAGAATGTGATGGGATCG+CGG | + | chr4.1:5596413-5596432 | MS.gene069558:intron | 45.0% |
| ! | ATCTTCATGTCGTGGCTTTG+AGG | + | chr4.1:5595985-5596004 | MS.gene069558:intron | 45.0% |
| ! | ATTGCTGCTTATCCTTGTGG+TGG | + | chr4.1:5593665-5593684 | MS.gene069558:CDS | 45.0% |
| ! | CAGATTGCTGCTTATCCTTG+TGG | + | chr4.1:5593662-5593681 | MS.gene069558:intron | 45.0% |
| ! | CCATTGAGTTGTGGTACCAT+AGG | + | chr4.1:5596654-5596673 | MS.gene069558:intron | 45.0% |
| ! | CTCGTTTGGGGTTTGTTTGT+AGG | + | chr4.1:5597880-5597899 | MS.gene069558:intron | 45.0% |
| ! | GCAGGTATTGTGAGTGATAG+AGG | - | chr4.1:5595908-5595927 | None:intergenic | 45.0% |
| ! | GGGGTTTGTTTGTAGGGATT+AGG | + | chr4.1:5597887-5597906 | MS.gene069558:intron | 45.0% |
| ! | TCTGTGATTGGTGACCCAAT+GGG | + | chr4.1:5596358-5596377 | MS.gene069558:intron | 45.0% |
| ! | TGATAAGCTCAAGGTGCCAA+GGG | - | chr4.1:5594482-5594501 | None:intergenic | 45.0% |
| ! | TTCTGTGATTGGTGACCCAA+TGG | + | chr4.1:5596357-5596376 | MS.gene069558:intron | 45.0% |
| !! | CTGGATTTTGAGAAAGCTGG+AGG | + | chr4.1:5597463-5597482 | MS.gene069558:intron | 45.0% |
| !! | GTGTGGTTGGTTTGCTTACA+TGG | - | chr4.1:5593558-5593577 | None:intergenic | 45.0% |
| AAACACACCATTGCGGCCTA+TGG | - | chr4.1:5596673-5596692 | None:intergenic | 50.0% | |
| AACGCCCTTGAAAGGAAACG+AGG | - | chr4.1:5596177-5596196 | None:intergenic | 50.0% | |
| AAGAGGAAGTGAAGAGGGAG+GGG | - | chr4.1:5597031-5597050 | None:intergenic | 50.0% | |
| ACACCGACACCTTTGATCAG+AGG | - | chr4.1:5593941-5593960 | None:intergenic | 50.0% | |
| ACCAGCACAGCATGTGTATC+TGG | - | chr4.1:5595032-5595051 | None:intergenic | 50.0% | |
| AGAACCTTAGAGATGGGAGG+AGG | - | chr4.1:5596985-5597004 | None:intergenic | 50.0% | |
| AGAGGTGAAAGTCCGACTAG+AGG | - | chr4.1:5595951-5595970 | None:intergenic | 50.0% | |
| AGCTGCCCAAGACCATTATG+TGG | - | chr4.1:5597123-5597142 | None:intergenic | 50.0% | |
| AGGATAAGCAGCAATCTGCG+AGG | - | chr4.1:5593660-5593679 | None:intergenic | 50.0% | |
| ATGAGAATGTGGGCCCAAAC+AGG | - | chr4.1:5597159-5597178 | None:intergenic | 50.0% | |
| CCGCCATAGGCTATTTGCAA+AGG | + | chr4.1:5596623-5596642 | MS.gene069558:intron | 50.0% | |
| CCTTCAACTGTCTGAACCAG+AGG | - | chr4.1:5596222-5596241 | None:intergenic | 50.0% | |
| GAACCTTAGAGATGGGAGGA+GGG | - | chr4.1:5596984-5597003 | None:intergenic | 50.0% | |
| GATAGATCACAAGCGGAGAC+AGG | - | chr4.1:5594682-5594701 | None:intergenic | 50.0% | |
| GCACCAACTCCTCTGATCAA+AGG | + | chr4.1:5593929-5593948 | MS.gene069558:intron | 50.0% | |
| GCACCAGCATCAGAATGTGA+TGG | + | chr4.1:5596405-5596424 | MS.gene069558:intron | 50.0% | |
| GGGAAGTGAGGAAATTTCGG+AGG | + | chr4.1:5598683-5598702 | MS.gene069558:CDS | 50.0% | |
| TATCCCTCCTCCCATCTCTA+AGG | + | chr4.1:5596978-5596997 | MS.gene069558:intron | 50.0% | |
| TCAAGGGAACTGACCCTCTT+GGG | - | chr4.1:5596799-5596818 | None:intergenic | 50.0% | |
| TCCAGATACACATGCTGTGC+TGG | + | chr4.1:5595028-5595047 | MS.gene069558:intron | 50.0% | |
| TGCAACTCCGGCAGAATTAC+CGG | + | chr4.1:5593487-5593506 | MS.gene069558:CDS | 50.0% | |
| TGCCATGATTGTGGGAAGTG+AGG | + | chr4.1:5598671-5598690 | MS.gene069558:CDS | 50.0% | |
| TTCAAGCGGGGTGGATGATA+TGG | - | chr4.1:5595867-5595886 | None:intergenic | 50.0% | |
| TTCAAGGGAACTGACCCTCT+TGG | - | chr4.1:5596800-5596819 | None:intergenic | 50.0% | |
| ! | CCTCTGGTTCAGACAGTTGA+AGG | + | chr4.1:5596219-5596238 | MS.gene069558:intron | 50.0% |
| ! | CTGATAAGCTCAAGGTGCCA+AGG | - | chr4.1:5594483-5594502 | None:intergenic | 50.0% |
| ! | GACCCAATGGGACTAGCAAT+TGG | + | chr4.1:5596370-5596389 | MS.gene069558:intron | 50.0% |
| !! | ATCCAACCAGCCGGTTTTGA+AGG | - | chr4.1:5596880-5596899 | None:intergenic | 50.0% |
| !! | GCTTACATGGAGTATCGACC+TGG | - | chr4.1:5593545-5593564 | None:intergenic | 50.0% |
| !!! | TCCAACCAGCCGGTTTTGAA+GGG | - | chr4.1:5596879-5596898 | None:intergenic | 50.0% |
| AAGCGGGGTGGATGATATGG+AGG | - | chr4.1:5595864-5595883 | None:intergenic | 55.0% | |
| ACCATAGGATTCAAGCGGGG+TGG | - | chr4.1:5595876-5595895 | None:intergenic | 55.0% | |
| ACGGTACCGCCCTAGCTAAT+AGG | - | chr4.1:5595798-5595817 | None:intergenic | 55.0% | |
| AGAGGAAGTGAAGAGGGAGG+GGG | - | chr4.1:5597030-5597049 | None:intergenic | 55.0% | |
| AGAGGACATGTGGGCCAAGA+AGG | - | chr4.1:5596837-5596856 | None:intergenic | 55.0% | |
| AGGTGACATAGCAGAGGGTG+AGG | - | chr4.1:5597083-5597102 | None:intergenic | 55.0% | |
| CATTCTGATGCTGGTGCACC+AGG | - | chr4.1:5596402-5596421 | None:intergenic | 55.0% | |
| CTTTGGCAATCCGCCCAAGA+GGG | + | chr4.1:5596783-5596802 | MS.gene069558:intron | 55.0% | |
| GCCCACATGTCCTCTATCTC+TGG | + | chr4.1:5596842-5596861 | MS.gene069558:intron | 55.0% | |
| GGGTCAGTTCCCTTGAAGTC+AGG | + | chr4.1:5596803-5596822 | MS.gene069558:intron | 55.0% | |
| GTTACATGCCCTGCAGTGGT+AGG | + | chr4.1:5595050-5595069 | MS.gene069558:CDS | 55.0% | |
| TCCACCCCGCTTGAATCCTA+TGG | + | chr4.1:5595872-5595891 | MS.gene069558:intron | 55.0% | |
| TCCCTTCAAAACCGGCTGGT+TGG | + | chr4.1:5596875-5596894 | MS.gene069558:intron | 55.0% | |
| TCCCTTGAAGTCAGGCAGCT+CGG | + | chr4.1:5596811-5596830 | MS.gene069558:intron | 55.0% | |
| TCTCCACACCTACCACTGCA+GGG | - | chr4.1:5595061-5595080 | None:intergenic | 55.0% | |
| TCTCTCCCTTCAAAACCGGC+TGG | + | chr4.1:5596871-5596890 | MS.gene069558:intron | 55.0% | |
| TGTGGTACCATAGGCCGCAA+TGG | + | chr4.1:5596663-5596682 | MS.gene069558:intron | 55.0% | |
| TTCTCCACACCTACCACTGC+AGG | - | chr4.1:5595062-5595081 | None:intergenic | 55.0% | |
| ! | GGATGTCCGCCATTGAGTTG+TGG | + | chr4.1:5596645-5596664 | MS.gene069558:intron | 55.0% |
| AGGGAACTGACCCTCTTGGG+CGG | - | chr4.1:5596796-5596815 | None:intergenic | 60.0% | |
| ATGCCCTGCAGTGGTAGGTG+TGG | + | chr4.1:5595055-5595074 | MS.gene069558:CDS | 60.0% | |
| CCTTTGGCAATCCGCCCAAG+AGG | + | chr4.1:5596782-5596801 | MS.gene069558:intron | 60.0% | |
| GCCGAGCTGCCTGACTTCAA+GGG | - | chr4.1:5596815-5596834 | None:intergenic | 60.0% | |
| GCTGGTTACATGCCCTGCAG+TGG | + | chr4.1:5595046-5595065 | MS.gene069558:CDS | 60.0% | |
| !! | CCTCTTGGGCGGATTGCCAA+AGG | - | chr4.1:5596785-5596804 | None:intergenic | 60.0% |
| GGCCGAGCTGCCTGACTTCA+AGG | - | chr4.1:5596816-5596835 | None:intergenic | 65.0% | |
| GTCAGGCAGCTCGGCCTTCT+TGG | + | chr4.1:5596820-5596839 | MS.gene069558:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 5593459 | 5598857 | 5593459 | ID=MS.gene069558 |
| chr4.1 | mRNA | 5593459 | 5598857 | 5593459 | ID=MS.gene069558.t1;Parent=MS.gene069558 |
| chr4.1 | exon | 5593459 | 5593558 | 5593459 | ID=MS.gene069558.t1.exon1;Parent=MS.gene069558.t1 |
| chr4.1 | CDS | 5593459 | 5593558 | 5593459 | ID=cds.MS.gene069558.t1;Parent=MS.gene069558.t1 |
| chr4.1 | exon | 5593665 | 5593686 | 5593665 | ID=MS.gene069558.t1.exon2;Parent=MS.gene069558.t1 |
| chr4.1 | CDS | 5593665 | 5593686 | 5593665 | ID=cds.MS.gene069558.t1;Parent=MS.gene069558.t1 |
| chr4.1 | exon | 5594896 | 5594952 | 5594896 | ID=MS.gene069558.t1.exon3;Parent=MS.gene069558.t1 |
| chr4.1 | CDS | 5594896 | 5594952 | 5594896 | ID=cds.MS.gene069558.t1;Parent=MS.gene069558.t1 |
| chr4.1 | exon | 5595033 | 5595114 | 5595033 | ID=MS.gene069558.t1.exon4;Parent=MS.gene069558.t1 |
| chr4.1 | CDS | 5595033 | 5595114 | 5595033 | ID=cds.MS.gene069558.t1;Parent=MS.gene069558.t1 |
| chr4.1 | exon | 5598280 | 5598375 | 5598280 | ID=MS.gene069558.t1.exon5;Parent=MS.gene069558.t1 |
| chr4.1 | CDS | 5598280 | 5598375 | 5598280 | ID=cds.MS.gene069558.t1;Parent=MS.gene069558.t1 |
| chr4.1 | exon | 5598624 | 5598748 | 5598624 | ID=MS.gene069558.t1.exon6;Parent=MS.gene069558.t1 |
| chr4.1 | CDS | 5598624 | 5598748 | 5598624 | ID=cds.MS.gene069558.t1;Parent=MS.gene069558.t1 |
| chr4.1 | exon | 5598839 | 5598857 | 5598839 | ID=MS.gene069558.t1.exon7;Parent=MS.gene069558.t1 |
| chr4.1 | CDS | 5598839 | 5598857 | 5598839 | ID=cds.MS.gene069558.t1;Parent=MS.gene069558.t1 |
| Gene Sequence |
| Protein sequence |
