AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070150.t1 MTR_2g043980 95.014 361 18 0 1 361 1 361 0.0 704
MS.gene070150.t1 MTR_2g043990 87.879 297 14 1 1 297 63 337 0.0 519
MS.gene070150.t1 MTR_0029s0050 61.326 362 130 6 7 361 1 359 5.78e-153 435
MS.gene070150.t1 MTR_3g448360 60.160 374 127 7 7 361 1 371 1.17e-152 434
MS.gene070150.t1 MTR_2g079090 60.773 362 132 6 7 361 1 359 1.81e-151 431
MS.gene070150.t1 MTR_0029s0100 61.050 362 131 6 7 361 1 359 3.97e-151 430
MS.gene070150.t1 MTR_2g079080 60.773 362 132 6 7 361 1 359 9.51e-151 429
MS.gene070150.t1 MTR_3g069780 58.400 375 132 7 7 361 1 371 5.00e-147 420
MS.gene070150.t1 MTR_3g438030 58.400 375 132 7 7 361 1 371 7.33e-147 420
MS.gene070150.t1 MTR_3g463960 57.732 388 126 9 9 361 4 388 6.99e-146 418
MS.gene070150.t1 MTR_3g463950 57.732 388 126 9 9 361 4 388 6.99e-146 418
MS.gene070150.t1 MTR_3g463970 57.732 388 126 9 9 361 4 388 6.99e-146 418
MS.gene070150.t1 MTR_3g463940 57.732 388 126 9 9 361 4 388 6.99e-146 418
MS.gene070150.t1 MTR_3g069520 57.909 373 135 7 7 361 1 369 5.02e-142 407
MS.gene070150.t1 MTR_3g463930 56.313 396 126 11 9 361 4 395 4.67e-140 403
MS.gene070150.t1 MTR_2g015650 48.525 373 168 7 9 361 6 374 5.97e-113 333
MS.gene070150.t1 MTR_2g015670 46.089 358 155 8 24 361 21 360 6.07e-99 297
MS.gene070150.t1 MTR_2g015630 46.313 339 152 7 39 353 36 368 6.19e-92 280
MS.gene070150.t1 MTR_2g015590 44.118 340 167 6 32 351 29 365 8.61e-87 267
MS.gene070150.t1 MTR_2g015580 44.118 340 166 7 32 351 45 380 3.63e-86 266
MS.gene070150.t1 MTR_2g015590 44.322 273 144 3 32 298 29 299 4.93e-67 215
MS.gene070150.t1 MTR_4g104240 31.989 372 222 8 5 353 6 369 6.58e-63 206
MS.gene070150.t1 MTR_7g087190 32.011 378 212 9 10 353 19 385 6.63e-54 182
MS.gene070150.t1 MTR_8g089805 34.153 366 191 11 24 353 30 381 1.35e-51 176
MS.gene070150.t1 MTR_7g116870 33.077 390 212 13 1 359 1 372 2.02e-50 173
MS.gene070150.t1 MTR_8g028160 34.133 375 201 12 11 352 14 375 2.85e-50 173
MS.gene070150.t1 MTR_1g030220 33.699 365 189 11 25 353 31 378 3.04e-49 170
MS.gene070150.t1 MTR_1g030340 32.997 397 201 15 4 353 3 381 4.35e-48 167
MS.gene070150.t1 MTR_1g030268 33.898 354 187 12 32 353 38 376 3.21e-46 162
MS.gene070150.t1 MTR_7g033150 32.609 368 202 12 24 356 25 381 5.37e-46 161
MS.gene070150.t1 MTR_7g111780 30.205 341 199 7 34 353 36 358 1.92e-45 159
MS.gene070150.t1 MTR_7g033165 33.521 355 186 11 32 351 31 370 2.55e-45 159
MS.gene070150.t1 MTR_7g113860 30.729 384 208 10 8 352 9 373 2.78e-44 157
MS.gene070150.t1 MTR_7g113860 32.533 375 187 13 21 352 16 367 3.68e-44 156
MS.gene070150.t1 MTR_1g030275 34.930 355 182 13 32 353 37 375 4.31e-44 156
MS.gene070150.t1 MTR_3g466240 39.623 212 93 3 105 311 2 183 9.71e-44 150
MS.gene070150.t1 MTR_3g466190 52.410 166 57 4 60 224 7 151 2.11e-43 150
MS.gene070150.t1 MTR_3g466190 57.692 78 20 1 297 361 152 229 1.17e-22 95.5
MS.gene070150.t1 MTR_1g030230 31.830 377 210 12 10 353 8 370 2.43e-42 152
MS.gene070150.t1 MTR_6g007090 31.298 393 204 14 5 353 2 372 8.75e-42 150
MS.gene070150.t1 MTR_1g082390 30.789 380 205 12 10 353 12 369 2.26e-41 149
MS.gene070150.t1 MTR_7g033155 29.925 401 223 12 1 356 8 395 1.90e-40 147
MS.gene070150.t1 MTR_6g007095 30.867 392 209 12 5 353 2 374 1.70e-39 149
MS.gene070150.t1 MTR_6g007095 29.653 317 177 9 61 353 396 690 5.21e-29 118
MS.gene070150.t1 MTR_8g038680 29.843 382 217 11 7 353 1 366 1.30e-36 136
MS.gene070150.t1 MTR_6g007100 30.809 383 202 15 5 353 2 355 2.00e-36 135
MS.gene070150.t1 MTR_7g033165 35.424 271 146 8 32 286 31 288 3.81e-35 131
MS.gene070150.t1 MTR_1g030268 34.767 279 157 9 32 298 38 303 6.99e-35 130
MS.gene070150.t1 MTR_5g022630 30.641 359 197 14 9 336 14 351 1.73e-34 130
MS.gene070150.t1 MTR_1g025780 29.189 370 213 14 1 345 9 354 6.85e-32 123
MS.gene070150.t1 MTR_8g031390 29.706 340 194 11 30 346 31 348 1.38e-31 122
MS.gene070150.t1 MTR_8g089805 30.667 300 163 9 88 353 25 313 1.58e-30 119
MS.gene070150.t1 MTR_8g031420 29.360 344 191 12 30 346 29 347 1.57e-29 117
MS.gene070150.t1 MTR_5g022640 28.022 364 211 14 12 345 17 359 3.99e-28 113
MS.gene070150.t1 MTR_7g111780 27.273 275 161 8 100 353 3 259 5.19e-28 110
MS.gene070150.t1 MTR_8g014910 29.380 371 211 14 1 344 1 347 6.41e-28 112
MS.gene070150.t1 MTR_1g025700 28.255 361 212 15 10 345 26 364 1.61e-27 111
MS.gene070150.t1 MTR_1g030265 30.293 307 162 12 83 353 53 343 2.82e-27 110
MS.gene070150.t1 MTR_8g031430 30.178 338 186 12 34 346 37 349 3.47e-27 110
MS.gene070150.t1 MTR_4g056160 30.564 337 189 14 34 344 27 344 1.05e-26 108
MS.gene070150.t1 MTR_3g114120 31.832 333 178 14 34 340 47 356 1.76e-26 108
MS.gene070150.t1 MTR_2g044100 28.571 350 202 13 27 349 36 364 3.25e-26 108
MS.gene070150.t1 MTR_2g100620 30.383 339 185 15 34 344 31 346 3.49e-26 107
MS.gene070150.t1 MTR_3g052490 29.006 362 209 12 12 347 12 351 3.67e-26 107
MS.gene070150.t1 MTR_8g031390 30.479 292 172 10 30 312 31 300 4.33e-26 106
MS.gene070150.t1 MTR_2g033930 27.424 361 223 9 7 346 5 347 4.43e-26 107
MS.gene070150.t1 MTR_4g056280 28.134 359 211 13 12 344 7 344 7.89e-26 106
MS.gene070150.t1 MTR_1g025720 27.778 360 209 14 10 340 9 346 2.05e-25 105
MS.gene070150.t1 MTR_8g022810 27.859 341 191 13 33 343 40 355 2.83e-25 105
MS.gene070150.t1 MTR_3g114090 30.117 342 193 14 29 345 31 351 4.12e-25 104
MS.gene070150.t1 MTR_1g025760 28.926 363 208 14 10 345 56 395 4.64e-25 105
MS.gene070150.t1 MTR_1g079540 27.824 363 216 13 9 346 6 347 9.20e-25 103
MS.gene070150.t1 MTR_8g079050 27.895 380 204 16 8 346 10 360 1.94e-24 103
MS.gene070150.t1 MTR_5g078210 27.171 357 215 14 7 341 1 334 1.98e-24 102
MS.gene070150.t1 MTR_2g033920 30.178 338 193 13 33 346 34 352 2.87e-24 102
MS.gene070150.t1 MTR_7g113860 27.974 311 166 10 81 352 8 299 3.30e-24 101
MS.gene070150.t1 MTR_8g031400 30.347 346 185 13 30 346 31 349 4.15e-24 102
MS.gene070150.t1 MTR_3g052580 27.446 368 204 15 13 347 9 346 5.29e-24 102
MS.gene070150.t1 MTR_1g025680 29.825 342 184 14 34 345 34 349 5.38e-24 102
MS.gene070150.t1 MTR_3g052580 27.446 368 204 15 13 347 8 345 7.13e-24 102
MS.gene070150.t1 MTR_8g075230 27.248 367 213 14 11 345 7 351 7.64e-24 101
MS.gene070150.t1 MTR_4g122200 28.532 361 211 14 10 346 15 352 8.09e-24 101
MS.gene070150.t1 MTR_5g009100 28.274 336 201 13 36 349 48 365 8.91e-24 101
MS.gene070150.t1 MTR_3g098270 29.070 344 195 15 32 347 32 354 1.05e-23 101
MS.gene070150.t1 MTR_2g015080 27.747 364 207 16 9 339 16 356 1.34e-23 100
MS.gene070150.t1 MTR_4g019880 27.688 372 221 14 1 346 1 350 3.18e-23 99.8
MS.gene070150.t1 MTR_8g022790 29.787 329 195 11 34 346 37 345 4.40e-23 99.0
MS.gene070150.t1 MTR_1g024890 28.863 343 194 12 31 346 29 348 5.33e-23 99.0
MS.gene070150.t1 MTR_8g087890 25.946 370 216 15 1 341 1 341 3.10e-22 96.7
MS.gene070150.t1 MTR_5g084750 27.224 371 212 17 10 349 6 349 3.25e-22 96.7
MS.gene070150.t1 MTR_8g012540 28.438 320 198 9 7 310 1 305 4.24e-22 96.3
MS.gene070150.t1 MTR_3g005650 25.581 344 209 13 14 335 12 330 4.86e-22 96.3
MS.gene070150.t1 MTR_7g116510 28.219 365 210 16 8 346 4 342 6.07e-22 95.9
MS.gene070150.t1 MTR_7g116520 27.824 363 215 13 7 346 12 350 9.71e-22 95.5
MS.gene070150.t1 MTR_3g435540 27.171 357 205 14 36 357 25 361 1.03e-21 95.5
MS.gene070150.t1 MTR_0565s0010 26.050 357 220 14 7 341 9 343 2.18e-21 94.4
MS.gene070150.t1 MTR_5g084770 26.776 366 217 16 7 344 1 343 2.86e-21 94.0
MS.gene070150.t1 MTR_3g052480 27.548 363 214 13 12 347 13 353 3.10e-21 94.0
MS.gene070150.t1 MTR_2g084585 28.698 338 191 15 34 344 30 344 8.78e-21 92.4
MS.gene070150.t1 MTR_4g108690 26.706 337 197 13 36 345 29 342 1.53e-20 92.0
MS.gene070150.t1 MTR_3g023220 28.000 350 192 16 14 335 8 325 1.62e-20 91.7
MS.gene070150.t1 MTR_5g074270 28.000 375 207 16 1 341 1 346 1.97e-20 91.7
MS.gene070150.t1 MTR_5g083040 26.852 324 204 13 34 336 32 343 3.28e-20 90.9
MS.gene070150.t1 MTR_3g082830 27.246 345 199 16 34 350 38 358 4.09e-20 90.9
MS.gene070150.t1 MTR_3g005660 27.879 330 197 14 36 341 38 350 4.22e-20 90.9
MS.gene070150.t1 MTR_4g087985 27.429 350 198 14 34 346 36 366 4.55e-20 90.5
MS.gene070150.t1 MTR_3g464730 25.956 366 222 14 7 345 1 344 6.52e-20 90.1
MS.gene070150.t1 MTR_1g069175 27.446 368 222 12 5 346 3 351 1.89e-19 89.0
MS.gene070150.t1 MTR_5g093090 26.923 364 217 15 9 346 6 346 2.23e-19 88.6
MS.gene070150.t1 MTR_4g035353 25.549 364 223 16 9 347 8 348 1.22e-18 86.7
MS.gene070150.t1 MTR_5g078210 25.575 348 216 12 7 341 1 318 1.29e-18 85.9
MS.gene070150.t1 MTR_5g084790 27.114 343 202 14 34 350 32 352 6.52e-18 84.3
MS.gene070150.t1 MTR_1g025910 26.888 331 196 14 39 345 41 349 1.03e-17 84.0
MS.gene070150.t1 MTR_1g060490 24.776 335 202 10 27 339 28 334 1.14e-17 83.6
MS.gene070150.t1 MTR_2g017965 26.344 372 201 17 7 340 1 337 1.17e-17 83.6
MS.gene070150.t1 MTR_8g075220 26.016 369 214 17 13 345 15 360 1.69e-17 83.2
MS.gene070150.t1 MTR_3g021460 24.722 360 240 10 7 353 1 342 1.97e-17 82.8
MS.gene070150.t1 MTR_1g092750 26.154 325 193 11 35 339 41 338 5.38e-17 81.6
MS.gene070150.t1 MTR_3g024510 24.176 364 219 14 7 341 13 348 6.32e-17 81.6
MS.gene070150.t1 MTR_0009s0250 25.067 371 219 16 15 360 13 349 7.73e-17 81.3
MS.gene070150.t1 MTR_1g060500 26.074 349 198 15 22 339 26 345 8.99e-16 78.2
MS.gene070150.t1 MTR_6g021530 26.608 342 202 14 38 351 33 353 1.95e-15 77.0
MS.gene070150.t1 MTR_8g087870 26.301 346 221 17 1 335 1 323 3.00e-15 76.3
MS.gene070150.t1 MTR_2g033920 28.674 279 169 10 33 298 34 295 3.06e-15 75.9
MS.gene070150.t1 MTR_8g074560 25.773 388 223 17 9 360 6 364 1.23e-14 74.7
MS.gene070150.t1 MTR_2g017925 26.590 346 209 17 7 335 10 327 1.54e-14 74.3
MS.gene070150.t1 MTR_1g092740 23.739 337 197 11 35 343 39 343 7.54e-14 72.4
MS.gene070150.t1 MTR_7g104220 25.076 331 197 13 35 343 43 344 9.38e-14 72.0
MS.gene070150.t1 MTR_1g092760 23.404 329 196 14 35 339 40 336 8.05e-13 69.3
MS.gene070150.t1 MTR_1g060520 23.032 343 180 10 22 339 26 309 1.06e-12 68.6
MS.gene070150.t1 MTR_7g008060 26.254 339 191 14 33 346 32 336 1.39e-12 68.6
MS.gene070150.t1 MTR_1g079590 28.079 203 108 7 21 196 18 209 1.63e-12 66.6
MS.gene070150.t1 MTR_5g087690 25.143 350 212 13 34 360 50 372 1.74e-12 68.2
MS.gene070150.t1 MTR_8g074570 25.068 367 220 17 11 346 14 356 8.66e-12 66.2
MS.gene070150.t1 MTR_8g022810 30.583 206 115 8 33 224 40 231 8.83e-12 65.9
MS.gene070150.t1 MTR_0127s0040 27.111 225 132 9 136 340 5 217 9.59e-12 64.7
MS.gene070150.t1 MTR_1g092690 23.442 337 200 15 26 339 46 347 2.62e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070150.t1 AT5G45910 43.280 372 179 9 7 351 3 369 1.45e-91 279
MS.gene070150.t1 AT1G28570 43.149 343 168 9 32 352 32 369 5.47e-87 268
MS.gene070150.t1 AT1G28610 41.689 367 188 10 6 351 3 364 9.64e-86 265
MS.gene070150.t1 AT1G28580 41.799 378 188 13 1 352 1 372 4.58e-85 263
MS.gene070150.t1 AT1G28590 42.473 372 171 11 15 354 13 373 6.50e-85 263
MS.gene070150.t1 AT1G31550 43.122 378 166 13 7 352 10 370 6.90e-85 263
MS.gene070150.t1 AT2G27360 41.711 374 191 12 1 352 1 369 9.47e-83 257
MS.gene070150.t1 AT1G28600 40.731 383 173 12 6 353 3 366 9.71e-83 257
MS.gene070150.t1 AT1G31550 42.328 378 166 13 7 352 10 367 2.49e-81 253
MS.gene070150.t1 AT1G28650 40.054 372 179 12 9 351 15 371 5.96e-78 244
MS.gene070150.t1 AT1G28660 40.267 375 174 13 9 351 13 369 2.21e-77 243
MS.gene070150.t1 AT1G28660 40.267 375 173 14 9 351 13 368 1.50e-75 238
MS.gene070150.t1 AT1G28640 39.510 367 188 11 9 351 13 369 6.71e-75 237
MS.gene070150.t1 AT1G28670 39.178 365 193 10 9 351 13 370 6.84e-75 236
MS.gene070150.t1 AT1G28580 41.781 292 148 9 78 352 5 291 1.80e-66 213
MS.gene070150.t1 AT3G48460 33.429 347 196 8 29 351 33 368 1.94e-58 194
MS.gene070150.t1 AT5G03980 34.349 361 168 12 1 343 1 310 7.01e-53 178
MS.gene070150.t1 AT4G01130 33.687 377 200 12 10 352 13 373 5.97e-52 177
MS.gene070150.t1 AT1G54790 32.461 382 207 10 5 352 6 370 6.65e-50 172
MS.gene070150.t1 AT1G28570 41.784 213 104 6 157 352 88 297 1.33e-48 166
MS.gene070150.t1 AT1G28570 41.346 208 102 6 162 352 2 206 1.88e-46 158
MS.gene070150.t1 AT5G14450 32.895 380 200 13 9 353 21 380 5.75e-46 161
MS.gene070150.t1 AT1G54790 30.628 382 217 9 5 352 2 369 2.48e-45 159
MS.gene070150.t1 AT1G67830 31.944 360 189 12 25 343 21 365 1.47e-42 152
MS.gene070150.t1 AT3G26430 33.613 357 189 12 32 353 29 372 2.18e-41 149
MS.gene070150.t1 AT1G54790 29.310 406 217 11 5 352 2 395 2.75e-41 149
MS.gene070150.t1 AT3G05180 32.033 359 190 12 27 349 31 371 8.08e-41 147
MS.gene070150.t1 AT1G56670 29.360 344 199 8 34 352 40 364 1.59e-40 147
MS.gene070150.t1 AT1G09390 28.647 377 220 10 3 352 7 361 1.21e-39 144
MS.gene070150.t1 AT3G62280 30.088 339 197 8 35 351 37 357 2.54e-39 143
MS.gene070150.t1 AT4G01130 34.333 300 172 9 10 298 13 298 6.31e-39 141
MS.gene070150.t1 AT1G28610 38.967 213 122 5 6 212 3 213 1.86e-37 135
MS.gene070150.t1 AT1G28600 39.269 219 103 7 6 207 3 208 1.02e-36 132
MS.gene070150.t1 AT3G27950 29.457 387 216 12 1 353 1 364 8.85e-33 126
MS.gene070150.t1 AT1G71120 30.925 346 172 13 34 346 31 342 1.68e-32 125
MS.gene070150.t1 AT5G63170 29.651 344 206 14 7 336 1 322 5.25e-30 117
MS.gene070150.t1 AT1G56670 29.710 276 165 6 34 298 40 297 1.17e-29 115
MS.gene070150.t1 AT5G15720 29.204 339 195 14 28 340 23 342 1.55e-29 117
MS.gene070150.t1 AT1G23500 29.630 351 206 15 10 346 16 339 3.47e-29 115
MS.gene070150.t1 AT1G75880 30.000 370 204 14 10 345 20 368 6.60e-29 115
MS.gene070150.t1 AT1G53940 32.070 343 183 12 34 347 39 360 9.15e-29 115
MS.gene070150.t1 AT5G08460 28.610 367 207 17 1 334 13 357 9.53e-29 115
MS.gene070150.t1 AT3G62280 29.670 273 165 7 35 298 37 291 3.91e-28 112
MS.gene070150.t1 AT4G01130 29.530 298 166 9 88 352 1 287 4.60e-28 111
MS.gene070150.t1 AT1G53920 28.571 392 216 14 6 360 14 378 8.05e-28 112
MS.gene070150.t1 AT1G75880 30.000 370 203 15 10 345 20 367 1.09e-27 112
MS.gene070150.t1 AT3G14225 29.513 349 184 13 34 347 37 358 2.96e-27 110
MS.gene070150.t1 AT1G75890 29.834 362 198 15 13 340 19 358 3.01e-27 110
MS.gene070150.t1 AT1G75890 29.700 367 202 15 13 345 48 392 4.66e-27 110
MS.gene070150.t1 AT1G73610 28.804 368 202 17 7 345 1 337 1.50e-26 108
MS.gene070150.t1 AT1G75890 29.301 372 210 15 13 345 19 376 1.68e-26 108
MS.gene070150.t1 AT3G14225 29.799 349 187 14 34 347 37 362 6.45e-26 107
MS.gene070150.t1 AT5G40990 29.825 342 192 12 34 347 37 358 1.19e-25 106
MS.gene070150.t1 AT2G40250 28.144 334 200 12 31 340 33 350 5.87e-25 104
MS.gene070150.t1 AT1G20132 28.358 335 198 13 34 345 61 376 6.70e-25 104
MS.gene070150.t1 AT5G42170 29.674 337 186 12 34 344 50 361 7.50e-25 104
MS.gene070150.t1 AT1G20120 29.446 343 197 14 32 348 76 399 8.93e-25 104
MS.gene070150.t1 AT3G14820 29.970 337 184 14 34 344 32 342 1.24e-24 103
MS.gene070150.t1 AT3G04290 27.654 358 213 13 12 346 11 345 1.51e-24 103
MS.gene070150.t1 AT1G29670 27.424 361 204 16 10 341 10 341 1.58e-24 103
MS.gene070150.t1 AT1G75920 28.571 357 219 14 3 345 2 336 2.09e-24 102
MS.gene070150.t1 AT1G20135 26.531 343 213 14 9 339 11 326 3.43e-24 101
MS.gene070150.t1 AT1G29670 27.147 361 205 16 10 341 78 409 4.68e-24 102
MS.gene070150.t1 AT1G59406 29.851 335 190 14 34 345 30 342 7.46e-24 101
MS.gene070150.t1 AT1G59030 29.851 335 190 14 34 345 30 342 7.46e-24 101
MS.gene070150.t1 AT1G58725 29.851 335 190 14 34 345 30 342 7.46e-24 101
MS.gene070150.t1 AT1G06990 27.394 376 212 15 10 348 5 356 8.88e-24 101
MS.gene070150.t1 AT4G10950 27.859 341 203 14 30 346 66 387 4.06e-23 99.8
MS.gene070150.t1 AT1G75930 29.787 329 195 15 32 344 27 335 4.54e-23 99.0
MS.gene070150.t1 AT1G20130 26.901 342 201 13 34 345 184 506 5.27e-23 100
MS.gene070150.t1 AT5G03810 28.655 342 187 12 34 344 30 345 5.71e-23 98.6
MS.gene070150.t1 AT1G20130 26.901 342 201 13 34 345 204 526 6.01e-23 100
MS.gene070150.t1 AT4G28780 27.793 367 218 14 7 346 1 347 6.14e-23 99.0
MS.gene070150.t1 AT5G03820 27.174 368 220 12 5 344 2 349 6.56e-23 98.6
MS.gene070150.t1 AT1G53990 29.787 376 196 18 9 347 5 349 7.93e-23 98.6
MS.gene070150.t1 AT5G45950 27.576 330 193 13 34 341 40 345 8.64e-23 98.2
MS.gene070150.t1 AT1G58520 29.787 329 191 13 34 345 30 335 1.51e-22 97.4
MS.gene070150.t1 AT1G58525 29.787 329 191 13 34 345 30 335 1.51e-22 97.4
MS.gene070150.t1 AT1G75900 28.614 339 189 14 34 344 43 356 2.70e-22 97.1
MS.gene070150.t1 AT1G71691 28.354 328 195 13 34 341 55 362 4.36e-22 96.7
MS.gene070150.t1 AT5G03820 26.923 364 220 11 7 344 34 377 4.37e-22 96.7
MS.gene070150.t1 AT2G23540 28.242 347 192 15 34 346 48 371 5.68e-22 96.3
MS.gene070150.t1 AT5G15720 28.571 287 172 12 28 298 23 292 6.43e-22 95.1
MS.gene070150.t1 AT5G22810 26.630 368 216 14 7 344 8 351 1.06e-21 95.1
MS.gene070150.t1 AT1G29660 26.891 357 212 14 10 341 10 342 2.77e-21 94.0
MS.gene070150.t1 AT5G41890 28.324 346 194 17 36 346 33 359 2.91e-21 94.4
MS.gene070150.t1 AT5G18430 28.134 359 212 15 15 346 7 346 6.83e-21 93.2
MS.gene070150.t1 AT3G16370 28.969 359 198 17 21 349 19 350 7.66e-21 92.8
MS.gene070150.t1 AT1G75920 26.923 364 219 13 11 345 1 346 1.17e-20 92.0
MS.gene070150.t1 AT1G54020 26.836 354 206 16 6 340 8 327 1.56e-20 92.0
MS.gene070150.t1 AT4G10950 27.566 341 200 15 30 346 66 383 1.57e-20 92.4
MS.gene070150.t1 AT5G15720 27.143 280 167 10 82 340 48 311 2.53e-20 90.9
MS.gene070150.t1 AT1G33811 26.888 331 205 14 34 341 34 350 2.73e-20 91.3
MS.gene070150.t1 AT3G53100 26.126 333 206 12 34 344 29 343 8.20e-20 89.7
MS.gene070150.t1 AT5G45670 25.000 364 214 14 1 335 1 334 1.37e-19 89.4
MS.gene070150.t1 AT1G71250 26.331 338 205 13 34 347 41 358 1.41e-19 89.4
MS.gene070150.t1 AT1G74460 26.347 334 202 13 36 345 25 338 1.53e-19 89.4
MS.gene070150.t1 AT5G45960 26.706 337 201 13 34 343 47 364 2.60e-19 88.6
MS.gene070150.t1 AT1G75920 28.179 291 180 10 66 345 36 308 2.94e-19 87.8
MS.gene070150.t1 AT1G54030 28.049 328 177 15 33 339 51 340 3.42e-19 88.6
MS.gene070150.t1 AT1G53940 31.655 278 158 9 34 298 39 297 7.76e-19 86.3
MS.gene070150.t1 AT2G03980 26.829 328 194 13 32 335 41 346 8.15e-19 87.0
MS.gene070150.t1 AT2G03980 26.829 328 194 13 32 335 41 346 8.15e-19 87.0
MS.gene070150.t1 AT2G03980 26.829 328 194 13 32 335 41 346 8.15e-19 87.0
MS.gene070150.t1 AT2G03980 26.829 328 194 13 32 335 41 346 8.15e-19 87.0
MS.gene070150.t1 AT5G03610 25.862 348 204 11 25 345 30 350 9.54e-19 86.7
MS.gene070150.t1 AT5G55050 27.164 335 193 12 35 339 40 353 1.56e-18 86.3
MS.gene070150.t1 AT3G09930 26.923 338 198 13 25 339 30 341 1.65e-18 85.9
MS.gene070150.t1 AT3G09930 26.923 338 198 13 25 339 30 341 1.65e-18 85.9
MS.gene070150.t1 AT4G26790 27.077 325 195 11 32 333 27 332 1.81e-18 85.9
MS.gene070150.t1 AT4G26790 27.077 325 195 11 32 333 27 332 1.81e-18 85.9
MS.gene070150.t1 AT3G50400 25.333 375 217 14 9 346 10 358 1.84e-18 86.3
MS.gene070150.t1 AT2G19010 26.113 337 199 13 36 351 32 339 1.88e-18 85.9
MS.gene070150.t1 AT5G33370 27.701 361 213 15 10 346 10 346 2.42e-18 85.9
MS.gene070150.t1 AT2G30310 26.099 364 206 15 12 340 11 346 2.68e-18 85.5
MS.gene070150.t1 AT2G42990 27.829 327 186 15 34 333 28 331 2.68e-18 85.5
MS.gene070150.t1 AT2G19010 26.113 337 199 13 36 351 62 369 2.77e-18 85.5
MS.gene070150.t1 AT1G75910 26.496 351 223 15 11 345 5 336 1.17e-17 83.6
MS.gene070150.t1 AT4G18970 23.780 328 198 10 36 335 30 333 2.61e-17 82.8
MS.gene070150.t1 AT1G54010 25.556 360 212 15 1 335 2 330 3.62e-17 82.4
MS.gene070150.t1 AT4G18970 23.780 328 198 10 36 335 30 333 3.98e-17 82.4
MS.gene070150.t1 AT3G43550 27.778 306 185 11 7 298 3 286 6.03e-17 80.5
MS.gene070150.t1 AT2G30220 26.479 355 209 16 12 337 11 342 6.64e-17 81.3
MS.gene070150.t1 AT1G71691 28.364 275 169 10 34 298 55 311 7.59e-17 80.9
MS.gene070150.t1 AT3G43570 26.158 367 189 15 7 345 1 313 2.62e-16 79.3
MS.gene070150.t1 AT3G14210 25.519 337 200 10 30 343 32 340 4.51e-16 79.3
MS.gene070150.t1 AT1G54000 24.370 357 218 14 9 343 12 338 4.79e-16 79.3
MS.gene070150.t1 AT1G75920 25.352 355 202 11 3 345 2 305 1.17e-15 77.4
MS.gene070150.t1 AT4G30140 26.176 340 193 11 36 351 35 340 1.18e-15 77.8
MS.gene070150.t1 AT2G19050 26.331 338 197 14 36 349 33 342 1.45e-15 77.4
MS.gene070150.t1 AT3G14220 23.481 362 224 14 1 340 1 331 2.42e-15 77.0
MS.gene070150.t1 AT2G19060 26.608 342 193 15 36 351 32 341 2.62e-15 76.6
MS.gene070150.t1 AT2G31540 24.352 386 226 17 1 348 1 358 6.32e-15 75.5
MS.gene070150.t1 AT1G58430 25.872 344 197 15 32 343 33 350 7.20e-15 75.5
MS.gene070150.t1 AT5G37690 23.780 328 208 13 38 343 31 338 1.16e-13 71.6
MS.gene070150.t1 AT5G03600 25.905 359 209 14 4 339 18 342 1.28e-13 71.6
MS.gene070150.t1 AT1G71691 26.335 281 169 12 79 341 1 261 6.05e-13 68.9
MS.gene070150.t1 AT2G36325 24.159 327 198 11 35 339 48 346 6.93e-12 66.6

Find 70 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTTCTAAATATATAAAT+TGG 0.129048 2.4:-46038759 MS.gene070150:CDS
GTTCTCTCTCAGTGTATTTA+TGG 0.162084 2.4:+46039616 None:intergenic
TGAATATCTTAATCCTCTTT+TGG 0.184478 2.4:-46040798 MS.gene070150:CDS
AAATATATTATCTTGACATT+AGG 0.260840 2.4:+46039590 None:intergenic
AGTGAAAACTACGATGAATT+TGG 0.279666 2.4:-46039695 MS.gene070150:CDS
TCCCAATTTATATATTTAGA+AGG 0.288128 2.4:+46038757 None:intergenic
AGGGTGTGGTGCCTCCCTTC+TGG 0.297469 2.4:-46039744 MS.gene070150:CDS
AATATATTATCTTGACATTA+GGG 0.326070 2.4:+46039591 None:intergenic
GGAGTGAACTTTGCATTTGC+TGG 0.336376 2.4:-46040294 MS.gene070150:CDS
TTTCGTGACGTCTTGGCCTT+TGG 0.340861 2.4:+46040317 None:intergenic
TCCCTTCTGGCATTGGCGAC+TGG 0.345028 2.4:-46039731 MS.gene070150:CDS
GTGCCAGGGAACTTCTCAAT+AGG 0.379519 2.4:-46039764 MS.gene070150:CDS
ACTTATTTCAAACAGCCTTC+AGG 0.393480 2.4:-46040631 MS.gene070150:CDS
CCCAATGAGTAATTACTTGC+TGG 0.395496 2.4:+46040219 None:intergenic
AACTACCCACCGTATTGTTC+TGG 0.401721 2.4:+46039530 None:intergenic
TCGGAGCAAATAGATTTGTT+AGG 0.406547 2.4:+46038781 None:intergenic
TCATTTGTAGCGGAGGCATA+TGG 0.407601 2.4:-46040372 MS.gene070150:intron
CGTTTGATCATAGATTTCAT+AGG 0.413108 2.4:-46040592 MS.gene070150:intron
GCCTATATGCTGCTTCTGTA+AGG 0.418654 2.4:+46038725 None:intergenic
TGGTGCCTCCCTTCTGGCAT+TGG 0.428830 2.4:-46039738 MS.gene070150:CDS
CTGGCATTGGCGACTGGCTA+TGG 0.434389 2.4:-46039725 MS.gene070150:CDS
ATACTCCGCCATAGTATTGA+AGG 0.444608 2.4:+46039661 None:intergenic
ACCAGCAAGTAATTACTCAT+TGG 0.444773 2.4:-46040220 MS.gene070150:CDS
AAAGAGGATTAAGATATTCA+TGG 0.445712 2.4:+46040801 None:intergenic
AATAATTATCTCAATAAAAG+TGG 0.451241 2.4:-46040252 MS.gene070150:CDS
CCGCCAAGCAATAGTTCATA+TGG 0.451369 2.4:-46040658 MS.gene070150:CDS
TTGAAAGGAGCTGGCTTAAG+TGG 0.454936 2.4:+46038661 None:intergenic
AGCTTCATATGGAAGATGAT+TGG 0.457834 2.4:+46040738 None:intergenic
CCCTTCTAAATATATAAATT+GGG 0.458420 2.4:-46038758 MS.gene070150:CDS
TCACTCCTTTCGTGACGTCT+TGG 0.468137 2.4:+46040310 None:intergenic
TGGTGCTTCGTATAAACGTT+TGG 0.474368 2.4:+46039550 None:intergenic
CCAGCAAGTAATTACTCATT+GGG 0.482449 2.4:-46040219 MS.gene070150:CDS
ATATGCTGCTTCTGTAAGGT+GGG 0.484524 2.4:+46038729 None:intergenic
TATATGCTGCTTCTGTAAGG+TGG 0.485674 2.4:+46038728 None:intergenic
AAGTTGAAAATAGCTTCATA+TGG 0.489466 2.4:+46040727 None:intergenic
ACCTTACAGAAGCAGCATAT+AGG 0.489949 2.4:-46038726 MS.gene070150:CDS
TCATCTTGTAAAAGCAAGAA+AGG 0.504378 2.4:-46040162 MS.gene070150:intron
GCATATAGGCAAATAGCAAA+AGG 0.507588 2.4:-46038712 MS.gene070150:CDS
GAACCATATGAACTATTGCT+TGG 0.507617 2.4:+46040655 None:intergenic
GCTGTAGAGATAGTTGTGCC+AGG 0.508915 2.4:-46039779 MS.gene070150:CDS
CCCAATTTATATATTTAGAA+GGG 0.510864 2.4:+46038758 None:intergenic
TTAAGTGGAGGATTTGCAAA+AGG 0.515527 2.4:+46038676 None:intergenic
CACCCTATTGAGAAGTTCCC+TGG 0.517824 2.4:+46039761 None:intergenic
TACTAGACATTAATCAAAGA+AGG 0.523323 2.4:-46039803 MS.gene070150:intron
TGCCAGGGAACTTCTCAATA+GGG 0.524928 2.4:-46039763 MS.gene070150:CDS
ATAGCAAAAGGATTAGTTGA+AGG 0.532471 2.4:-46038700 MS.gene070150:CDS
TCTAAATATATAAATTGGGA+TGG 0.538186 2.4:-46038754 MS.gene070150:CDS
ACACAAATGTGACCCAAAAG+AGG 0.544147 2.4:+46040785 None:intergenic
TTGGTGATAGTCTTATAAGC+TGG 0.557346 2.4:+46040336 None:intergenic
ATTATTATAATTAAGTGCAG+TGG 0.559806 2.4:+46040269 None:intergenic
ATTTATATATTTAGAAGGGT+CGG 0.560332 2.4:+46038762 None:intergenic
GTGATTGCATCAACCACTGA+GGG 0.567669 2.4:+46039934 None:intergenic
AGCCAGTCGCCAATGCCAGA+AGG 0.576626 2.4:+46039729 None:intergenic
AAAGGAGCTGGCTTAAGTGG+AGG 0.579527 2.4:+46038664 None:intergenic
GCCAGTCGCCAATGCCAGAA+GGG 0.593603 2.4:+46039730 None:intergenic
AAAACTTTAAAAGCATGTTG+TGG 0.595984 2.4:-46038808 MS.gene070150:CDS
TATGCTGCTTCTGTAAGGTG+GGG 0.596122 2.4:+46038730 None:intergenic
GGGAACTTCTCAATAGGGTG+TGG 0.596334 2.4:-46039758 MS.gene070150:CDS
TAGAAATGTTGTTCCCTCAG+TGG 0.597906 2.4:-46039947 MS.gene070150:CDS
TACGAAGCACCAGAACAATA+CGG 0.601683 2.4:-46039539 MS.gene070150:intron
GGTGACTCAATTAGTGACAC+AGG 0.605738 2.4:-46040703 MS.gene070150:CDS
TAAAGCCTTCAATACTATGG+CGG 0.610165 2.4:-46039666 MS.gene070150:CDS
ACTTTAAAAGCATGTTGTGG+AGG 0.617460 2.4:-46038805 MS.gene070150:CDS
CTGTAGAGATAGTTGTGCCA+GGG 0.619777 2.4:-46039778 MS.gene070150:CDS
CCATATGAACTATTGCTTGG+CGG 0.623846 2.4:+46040658 None:intergenic
AAAGGCCAAGACGTCACGAA+AGG 0.632440 2.4:-46040315 MS.gene070150:CDS
AGTCGCCAATGCCAGAAGGG+AGG 0.634631 2.4:+46039733 None:intergenic
GCTTATAAGACTATCACCAA+AGG 0.687780 2.4:-46040333 MS.gene070150:CDS
AAAATTGTGTGAGATATGAG+AGG 0.692350 2.4:+46039978 None:intergenic
TGTGATTGCATCAACCACTG+AGG 0.696004 2.4:+46039933 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATACACTATATATAAA+AGG + chr2.4:46040467-46040486 None:intergenic 10.0%
!!! TATCTTTTATTTAAAGTTAT+TGG - chr2.4:46040261-46040280 MS.gene070150:CDS 10.0%
!!! TTTCATATACATTTAATTTT+TGG - chr2.4:46038923-46038942 MS.gene070150:intron 10.0%
!! AAATATATTATCTTGACATT+AGG + chr2.4:46039881-46039900 None:intergenic 15.0%
!! AATAATTATCTCAATAAAAG+TGG - chr2.4:46039216-46039235 MS.gene070150:intron 15.0%
!! AATATATTATCTTGACATTA+GGG + chr2.4:46039880-46039899 None:intergenic 15.0%
!! ACAAAAACAAAATATATAGT+TGG + chr2.4:46039634-46039653 None:intergenic 15.0%
!! ATATAATTAGTAATCACAAT+AGG + chr2.4:46040006-46040025 None:intergenic 15.0%
!! GTGATTACTAATTATATTAT+AGG - chr2.4:46040009-46040028 MS.gene070150:CDS 15.0%
!! GTTAATTAAATAAGTAGATA+TGG + chr2.4:46039337-46039356 None:intergenic 15.0%
!! TTATAGGTAAACTTATTAAT+AGG - chr2.4:46040401-46040420 MS.gene070150:intron 15.0%
!!! AATATTTTTATAAGTTGGTT+TGG + chr2.4:46040113-46040132 None:intergenic 15.0%
!!! ACGTAAGATTTTATATAATA+AGG - chr2.4:46040507-46040526 MS.gene070150:intron 15.0%
!! AAATATTCATTCATTTGTAG+CGG - chr2.4:46039086-46039105 MS.gene070150:intron 20.0%
!! ACCCTTCTAAATATATAAAT+TGG - chr2.4:46040709-46040728 MS.gene070150:CDS 20.0%
!! ATTATTATAATTAAGTGCAG+TGG + chr2.4:46039202-46039221 None:intergenic 20.0%
!! ATTTATATATTTAGAAGGGT+CGG + chr2.4:46040709-46040728 None:intergenic 20.0%
!! CAACAACATAATATTCTTAT+AGG - chr2.4:46040385-46040404 MS.gene070150:intron 20.0%
!! CCCAATTTATATATTTAGAA+GGG + chr2.4:46040713-46040732 None:intergenic 20.0%
!! CCCTTCTAAATATATAAATT+GGG - chr2.4:46040710-46040729 MS.gene070150:CDS 20.0%
!! CTATAAGAATATTATGTTGT+TGG + chr2.4:46040387-46040406 None:intergenic 20.0%
!! CTATATATAAAAGGAATACA+TGG + chr2.4:46040458-46040477 None:intergenic 20.0%
!! TCCCAATTTATATATTTAGA+AGG + chr2.4:46040714-46040733 None:intergenic 20.0%
!! TCTAAATATATAAATTGGGA+TGG - chr2.4:46040714-46040733 MS.gene070150:CDS 20.0%
!!! AAGTATAATTTAACTTACAG+TGG + chr2.4:46039568-46039587 None:intergenic 20.0%
!!! ACATTTGTGTATAGTTTTTT+AGG - chr2.4:46038696-46038715 MS.gene070150:CDS 20.0%
!!! ATTTTTTTACAACATGAAAG+TGG + chr2.4:46040295-46040314 None:intergenic 20.0%
!!! TTGTTTTTAATTCCATAACT+AGG - chr2.4:46039374-46039393 MS.gene070150:intron 20.0%
! AAAGAGGATTAAGATATTCA+TGG + chr2.4:46038670-46038689 None:intergenic 25.0%
! AAGTTGAAAATAGCTTCATA+TGG + chr2.4:46038744-46038763 None:intergenic 25.0%
! ATAATAATGAGTTTGAACTG+GGG - chr2.4:46038985-46039004 MS.gene070150:intron 25.0%
! ATGAATGTGAAATTCAAGTA+TGG + chr2.4:46038967-46038986 None:intergenic 25.0%
! CATAATAATGAGTTTGAACT+GGG - chr2.4:46038984-46039003 MS.gene070150:intron 25.0%
! GTATGAATGATTTAACAGTT+CGG - chr2.4:46039597-46039616 MS.gene070150:CDS 25.0%
! TACTAGACATTAATCAAAGA+AGG - chr2.4:46039665-46039684 MS.gene070150:CDS 25.0%
! TCATAATAATGAGTTTGAAC+TGG - chr2.4:46038983-46039002 MS.gene070150:intron 25.0%
! TTTGATTAATGTCTAGTACA+TGG + chr2.4:46039663-46039682 None:intergenic 25.0%
!! AAAACTTTAAAAGCATGTTG+TGG - chr2.4:46040660-46040679 MS.gene070150:CDS 25.0%
!! GAATATCTTAATCCTCTTTT+GGG - chr2.4:46038671-46038690 MS.gene070150:CDS 25.0%
!! TAAAAGGAATACATGGTTTT+AGG + chr2.4:46040451-46040470 None:intergenic 25.0%
!! TGAATATCTTAATCCTCTTT+TGG - chr2.4:46038670-46038689 MS.gene070150:CDS 25.0%
!!! AAGAAGTCACTATTTTTAGT+GGG - chr2.4:46039444-46039463 MS.gene070150:intron 25.0%
!!! TATGAAGCTATTTTCAACTT+TGG - chr2.4:46038744-46038763 MS.gene070150:CDS 25.0%
!!! TCAAGTACATTTTTTTATGC+AGG - chr2.4:46040624-46040643 MS.gene070150:CDS 25.0%
!!! TTTTAAAGCCTTCAATACTA+TGG - chr2.4:46039799-46039818 MS.gene070150:CDS 25.0%
AAAATTGTGTGAGATATGAG+AGG + chr2.4:46039493-46039512 None:intergenic 30.0%
AGTGAAAACTACGATGAATT+TGG - chr2.4:46039773-46039792 MS.gene070150:CDS 30.0%
CAAACAATGTTACCTAGTTA+TGG + chr2.4:46039389-46039408 None:intergenic 30.0%
CGTTTGATCATAGATTTCAT+AGG - chr2.4:46038876-46038895 MS.gene070150:intron 30.0%
TCATCTTGTAAAAGCAAGAA+AGG - chr2.4:46039306-46039325 MS.gene070150:intron 30.0%
TTTGAATAAACTACCTAACC+AGG + chr2.4:46040549-46040568 None:intergenic 30.0%
!! ATAGCAAAAGGATTAGTTGA+AGG - chr2.4:46040768-46040787 MS.gene070150:CDS 30.0%
!!! CAAGAAGTCACTATTTTTAG+TGG - chr2.4:46039443-46039462 MS.gene070150:intron 30.0%
!!! CTATTTTTAGTGGGAGAAAT+TGG - chr2.4:46039453-46039472 MS.gene070150:intron 30.0%
AATAAAAAGAGCGAACAGAC+AGG + chr2.4:46040197-46040216 None:intergenic 35.0%
ACCAGCAAGTAATTACTCAT+TGG - chr2.4:46039248-46039267 MS.gene070150:intron 35.0%
ACTTATTTCAAACAGCCTTC+AGG - chr2.4:46038837-46038856 MS.gene070150:intron 35.0%
AGCTTCATATGGAAGATGAT+TGG + chr2.4:46038733-46038752 None:intergenic 35.0%
CCAGCAAGTAATTACTCATT+GGG - chr2.4:46039249-46039268 MS.gene070150:intron 35.0%
GAACCATATGAACTATTGCT+TGG + chr2.4:46038816-46038835 None:intergenic 35.0%
GCATATAGGCAAATAGCAAA+AGG - chr2.4:46040756-46040775 MS.gene070150:CDS 35.0%
GCTTATAAGACTATCACCAA+AGG - chr2.4:46039135-46039154 MS.gene070150:intron 35.0%
GTCTTATAAGCTGGCAAAAA+TGG + chr2.4:46039126-46039145 None:intergenic 35.0%
GTTCTCTCTCAGTGTATTTA+TGG + chr2.4:46039855-46039874 None:intergenic 35.0%
TAAAGCCTTCAATACTATGG+CGG - chr2.4:46039802-46039821 MS.gene070150:intron 35.0%
TATTCATTCATTTGTAGCGG+AGG - chr2.4:46039089-46039108 MS.gene070150:intron 35.0%
TTAAGTGGAGGATTTGCAAA+AGG + chr2.4:46040795-46040814 None:intergenic 35.0%
! ACTTTAAAAGCATGTTGTGG+AGG - chr2.4:46040663-46040682 MS.gene070150:CDS 35.0%
! TCGGAGCAAATAGATTTGTT+AGG + chr2.4:46040690-46040709 None:intergenic 35.0%
!! TAAGCTATTTTGAAAGGAGC+TGG + chr2.4:46040819-46040838 None:intergenic 35.0%
!! TTGGTGATAGTCTTATAAGC+TGG + chr2.4:46039135-46039154 None:intergenic 35.0%
!! TTTTTAGTGGGAGAAATTGG+TGG - chr2.4:46039456-46039475 MS.gene070150:intron 35.0%
ACACAAATGTGACCCAAAAG+AGG + chr2.4:46038686-46038705 None:intergenic 40.0%
ACCTTACAGAAGCAGCATAT+AGG - chr2.4:46040742-46040761 MS.gene070150:CDS 40.0%
CCATATGAACTATTGCTTGG+CGG + chr2.4:46038813-46038832 None:intergenic 40.0%
CCCAATGAGTAATTACTTGC+TGG + chr2.4:46039252-46039271 None:intergenic 40.0%
TAGAAATGTTGTTCCCTCAG+TGG - chr2.4:46039521-46039540 MS.gene070150:intron 40.0%
TATGCTACAATAGCCTGGTT+AGG - chr2.4:46040533-46040552 MS.gene070150:intron 40.0%
TGGTGCTTCGTATAAACGTT+TGG + chr2.4:46039921-46039940 None:intergenic 40.0%
! ATACTCCGCCATAGTATTGA+AGG + chr2.4:46039810-46039829 None:intergenic 40.0%
! ATATGCTGCTTCTGTAAGGT+GGG + chr2.4:46040742-46040761 None:intergenic 40.0%
! TACGAAGCACCAGAACAATA+CGG - chr2.4:46039929-46039948 MS.gene070150:CDS 40.0%
! TATATGCTGCTTCTGTAAGG+TGG + chr2.4:46040743-46040762 None:intergenic 40.0%
AACTACCCACCGTATTGTTC+TGG + chr2.4:46039941-46039960 None:intergenic 45.0%
AAGCACCAGAACAATACGGT+GGG - chr2.4:46039933-46039952 MS.gene070150:CDS 45.0%
CCATCTGAAAAACGTCCTGA+AGG + chr2.4:46038855-46038874 None:intergenic 45.0%
CCGCCAAGCAATAGTTCATA+TGG - chr2.4:46038810-46038829 MS.gene070150:CDS 45.0%
CTGTAGAGATAGTTGTGCCA+GGG - chr2.4:46039690-46039709 MS.gene070150:CDS 45.0%
GGAGTGAACTTTGCATTTGC+TGG - chr2.4:46039174-46039193 MS.gene070150:intron 45.0%
GGTGACTCAATTAGTGACAC+AGG - chr2.4:46038765-46038784 MS.gene070150:CDS 45.0%
GTGATTGCATCAACCACTGA+GGG + chr2.4:46039537-46039556 None:intergenic 45.0%
TGCCAGGGAACTTCTCAATA+GGG - chr2.4:46039705-46039724 MS.gene070150:CDS 45.0%
TGTGATTGCATCAACCACTG+AGG + chr2.4:46039538-46039557 None:intergenic 45.0%
! GCCTATATGCTGCTTCTGTA+AGG + chr2.4:46040746-46040765 None:intergenic 45.0%
! TATGCTGCTTCTGTAAGGTG+GGG + chr2.4:46040741-46040760 None:intergenic 45.0%
! TCATTTGTAGCGGAGGCATA+TGG - chr2.4:46039096-46039115 MS.gene070150:intron 45.0%
! TTGAAAGGAGCTGGCTTAAG+TGG + chr2.4:46040810-46040829 None:intergenic 45.0%
!! CCTTCAGGACGTTTTTCAGA+TGG - chr2.4:46038852-46038871 MS.gene070150:intron 45.0%
!!! TATAAAATATTTTTATAAGT+TGG + chr2.4:46040118-46040137 None:intergenic 5.0%
AAAGGCCAAGACGTCACGAA+AGG - chr2.4:46039153-46039172 MS.gene070150:intron 50.0%
CACCCTATTGAGAAGTTCCC+TGG + chr2.4:46039710-46039729 None:intergenic 50.0%
GCTGTAGAGATAGTTGTGCC+AGG - chr2.4:46039689-46039708 MS.gene070150:CDS 50.0%
GGACGTATGCTACAATAGCC+TGG - chr2.4:46040528-46040547 MS.gene070150:intron 50.0%
GGGAACTTCTCAATAGGGTG+TGG - chr2.4:46039710-46039729 MS.gene070150:CDS 50.0%
GTGCCAGGGAACTTCTCAAT+AGG - chr2.4:46039704-46039723 MS.gene070150:CDS 50.0%
TCACTCCTTTCGTGACGTCT+TGG + chr2.4:46039161-46039180 None:intergenic 50.0%
! AAAGGAGCTGGCTTAAGTGG+AGG + chr2.4:46040807-46040826 None:intergenic 50.0%
! GAAGCACCAGAACAATACGG+TGG - chr2.4:46039932-46039951 MS.gene070150:CDS 50.0%
! TTTCGTGACGTCTTGGCCTT+TGG + chr2.4:46039154-46039173 None:intergenic 50.0%
AGCCAGTCGCCAATGCCAGA+AGG + chr2.4:46039742-46039761 None:intergenic 60.0%
AGTCGCCAATGCCAGAAGGG+AGG + chr2.4:46039738-46039757 None:intergenic 60.0%
GCCAGTCGCCAATGCCAGAA+GGG + chr2.4:46039741-46039760 None:intergenic 60.0%
TGGTGCCTCCCTTCTGGCAT+TGG - chr2.4:46039730-46039749 MS.gene070150:CDS 60.0%
!! CTGGCATTGGCGACTGGCTA+TGG - chr2.4:46039743-46039762 MS.gene070150:CDS 60.0%
!! TCCCTTCTGGCATTGGCGAC+TGG - chr2.4:46039737-46039756 MS.gene070150:CDS 60.0%
AGGGTGTGGTGCCTCCCTTC+TGG - chr2.4:46039724-46039743 MS.gene070150:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 46038651 46040839 46038651 ID=MS.gene070150
chr2.4 mRNA 46038651 46040839 46038651 ID=MS.gene070150.t1;Parent=MS.gene070150
chr2.4 exon 46040593 46040839 46040593 ID=MS.gene070150.t1.exon1;Parent=MS.gene070150.t1
chr2.4 CDS 46040593 46040839 46040593 ID=cds.MS.gene070150.t1;Parent=MS.gene070150.t1
chr2.4 exon 46040163 46040384 46040163 ID=MS.gene070150.t1.exon2;Parent=MS.gene070150.t1
chr2.4 CDS 46040163 46040384 46040163 ID=cds.MS.gene070150.t1;Parent=MS.gene070150.t1
chr2.4 exon 46039921 46040063 46039921 ID=MS.gene070150.t1.exon3;Parent=MS.gene070150.t1
chr2.4 CDS 46039921 46040063 46039921 ID=cds.MS.gene070150.t1;Parent=MS.gene070150.t1
chr2.4 exon 46039540 46039819 46039540 ID=MS.gene070150.t1.exon4;Parent=MS.gene070150.t1
chr2.4 CDS 46039540 46039819 46039540 ID=cds.MS.gene070150.t1;Parent=MS.gene070150.t1
chr2.4 exon 46038651 46038844 46038651 ID=MS.gene070150.t1.exon5;Parent=MS.gene070150.t1
chr2.4 CDS 46038651 46038844 46038651 ID=cds.MS.gene070150.t1;Parent=MS.gene070150.t1
Gene Sequence

>MS.gene070150

ATGGCTTACAATAACACCATGAATATCTTAATCCTCTTTTGGGTCACATTTGTGTATAGTTTTTTAGGAGTTTCAAATTCCAATCATCTTCCATATGAAGCTATTTTCAACTTTGGTGACTCAATTAGTGACACAGGAAATCAAGCTTCTTTTTACACACCGCCAAGCAATAGTTCATATGGTTCAACTTATTTCAAACAGCCTTCAGGACGTTTTTCAGATGGACGTTTGATCATAGATTTCATAGGTATTTTACAGTTATATGAAAATCTTTTCATATACATTTAATTTTTGGAGAAAAATTCAAATATTTCCATACTTGAATTTCACATTCATAATAATGAGTTTGAACTGGGGTGTTAGAAAGTGTATTATTGATATTTTTTATTTAAATAAACTTAATAATCGCGCAATTTTAATTGAATAAACAGTAACAAATATTCATTCATTTGTAGCGGAGGCATATGGATTGCCATTTTTGCCAGCTTATAAGACTATCACCAAAGGCCAAGACGTCACGAAAGGAGTGAACTTTGCATTTGCTGGTTCCACTGCACTTAATTATAATAATTATCTCAATAAAAGTGGAATTCATGTACCAGCAAGTAATTACTCATTGGGTGTTCAACTTAAGTTGTTTAAAGAGTTTAGAAATTCATCTTGTAAAAGCAAGAAAGGTATTACCATATCTACTTATTTAATTAACGTCTCTTTCAAAATGTTTTGTTTTTAATTCCATAACTAGGTAACATTGTTTGTTACATTATATAATGTAGATTGTCGTAGCTACTTCAAGAAGTCACTATTTTTAGTGGGAGAAATTGGTGGAAATGATCTTTCCTCTCATATCTCACACAATTTTTCAAACTTTAGAAATGTTGTTCCCTCAGTGGTTGATGCAATCACAAAAGCTACCACTGTAAGTTAAATTATACTTGATAGAGACGTATGAATGATTTAACAGTTCGGTGAGTAATTTACCAACTATATATTTTGTTTTTGTTTCTTTCCATGTACTAGACATTAATCAAAGAAGGAGCTGTAGAGATAGTTGTGCCAGGGAACTTCTCAATAGGGTGTGGTGCCTCCCTTCTGGCATTGGCGACTGGCTATGGTAATAAGAGTGAAAACTACGATGAATTTGGATGTTTTAAAGCCTTCAATACTATGGCGGAGTATTTCAATGACAAACTAATATATTCCATAAATACACTGAGAGAGAACTACCCTAATGTCAAGATAATATATTTTGACTACTACAATGCTGCCAAACGTTTATACGAAGCACCAGAACAATACGGTGGGTAGTTATTTTATTTAACTTTTTACATTTTACATTGTTAGATGTACAACCTATTGTGATTACTAATTATATTATAGGTACATTTTCGCTTATCTTTTGACAAGCTTGTGATTGTGAGAGCTTATAGAAGCAGTGTATAACATGTGCATAAGCTCTCCAAACCAACTTATAAAAATATTTTATATAAAAATTATTTTAATTTGTTTAATCTATTACTAGCATTAAGACAAACGCTTTGTACCTGTCTGTTCGCTCTTTTTATTGCGCTGATGCGTATAATTTATGAATAATAGTTCTTATGACATTTTATCTTTTATTTAAAGTTATTGGTAAATAATCCACTTTCATGTTGTAAAAAAATATACTCATCTTTTTCAATGACATCAACAATATAGCAAATACAGTATAATTCTTATATTTTTTATTGACACCAACAACATAATATTCTTATAGGTAAACTTATTAATAGGTATAATTGAAAGCGAAAAAGTCATCCTAAAACCATGTATTCCTTTTATATATAGTGTATATATATATTATAGAAATAACTCACACGTAAGATTTTATATAATAAGGACGTATGCTACAATAGCCTGGTTAGGTAGTTTATTCAAACAAAACGTAAGATTTACTTTTGTCTATTTCATTTATACATTTTCATTTATTTAATTCAAGTACATTTTTTTATGCAGGCTTTGATAAGAGTAAAACTTTAAAAGCATGTTGTGGAGGTCCTAACAAATCTATTTGCTCCGACCCTTCTAAATATATAAATTGGGATGGACCCCACCTTACAGAAGCAGCATATAGGCAAATAGCAAAAGGATTAGTTGAAGGTCCTTTTGCAAATCCTCCACTTAAGCCAGCTCCTTTCAAAATAGCTTAA
Protein sequence

>MS.gene070150.t1

MAYNNTMNILILFWVTFVYSFLGVSNSNHLPYEAIFNFGDSISDTGNQASFYTPPSNSSYGSTYFKQPSGRFSDGRLIIDFIAEAYGLPFLPAYKTITKGQDVTKGVNFAFAGSTALNYNNYLNKSGIHVPASNYSLGVQLKLFKEFRNSSCKSKKDCRSYFKKSLFLVGEIGGNDLSSHISHNFSNFRNVVPSVVDAITKATTTLIKEGAVEIVVPGNFSIGCGASLLALATGYGNKSENYDEFGCFKAFNTMAEYFNDKLIYSINTLRENYPNVKIIYFDYYNAAKRLYEAPEQYGFDKSKTLKACCGGPNKSICSDPSKYINWDGPHLTEAAYRQIAKGLVEGPFANPPLKPAPFKIA