Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070447.t1 | XP_024634054.1 | 81.8 | 55 | 10 | 0 | 1 | 55 | 33 | 87 | 4.90E-15 | 92 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070447.t1 | G7IZL7 | 81.8 | 55 | 10 | 0 | 1 | 55 | 33 | 87 | 3.6e-15 | 92.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049711 | MS.gene070447 | 0.805129 | 1.55E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070447.t1 | MTR_3g034610 | 70.336 | 327 | 71 | 2 | 1 | 301 | 1 | 327 | 9.74e-150 | 426 |
| MS.gene070447.t1 | MTR_3g034610 | 69.203 | 276 | 82 | 1 | 25 | 297 | 126 | 401 | 2.51e-125 | 364 |
| MS.gene070447.t1 | MTR_3g034640 | 76.431 | 297 | 41 | 2 | 33 | 300 | 169 | 465 | 3.26e-148 | 425 |
| MS.gene070447.t1 | MTR_3g034640 | 79.934 | 304 | 58 | 1 | 1 | 301 | 33 | 336 | 3.04e-145 | 417 |
| MS.gene070447.t1 | MTR_3g034640 | 60.215 | 279 | 82 | 2 | 25 | 274 | 213 | 491 | 4.88e-101 | 305 |
| MS.gene070447.t1 | MTR_3g034640 | 65.351 | 228 | 76 | 1 | 25 | 249 | 265 | 492 | 7.13e-91 | 279 |
| MS.gene070447.t1 | MTR_3g116430 | 60.335 | 358 | 76 | 6 | 1 | 301 | 33 | 381 | 6.89e-128 | 371 |
| MS.gene070447.t1 | MTR_3g116430 | 58.400 | 250 | 85 | 4 | 56 | 301 | 16 | 250 | 3.15e-79 | 247 |
| MS.gene070447.t1 | MTR_3g116440 | 58.199 | 311 | 120 | 4 | 1 | 301 | 33 | 343 | 9.57e-108 | 317 |
| MS.gene070447.t1 | MTR_3g116440 | 60.000 | 190 | 72 | 2 | 25 | 210 | 167 | 356 | 4.97e-62 | 201 |
| MS.gene070447.t1 | MTR_3g107810 | 45.376 | 346 | 144 | 3 | 1 | 301 | 33 | 378 | 1.23e-91 | 280 |
| MS.gene070447.t1 | MTR_3g107810 | 48.718 | 273 | 137 | 1 | 32 | 301 | 132 | 404 | 2.32e-84 | 261 |
| MS.gene070447.t1 | MTR_3g107810 | 48.339 | 271 | 137 | 1 | 32 | 299 | 158 | 428 | 6.06e-82 | 255 |
| MS.gene070447.t1 | MTR_3g107810 | 47.985 | 273 | 139 | 1 | 32 | 301 | 184 | 456 | 3.88e-79 | 248 |
| MS.gene070447.t1 | MTR_3g107810 | 48.754 | 281 | 134 | 3 | 24 | 301 | 27 | 300 | 2.63e-78 | 246 |
| MS.gene070447.t1 | MTR_3g107810 | 44.912 | 285 | 149 | 3 | 19 | 299 | 196 | 476 | 1.29e-72 | 231 |
| MS.gene070447.t1 | MTR_4g069810 | 33.033 | 333 | 176 | 16 | 1 | 299 | 34 | 353 | 4.58e-35 | 130 |
| MS.gene070447.t1 | MTR_4g069810 | 35.294 | 187 | 106 | 6 | 120 | 300 | 77 | 254 | 1.84e-22 | 96.3 |
| MS.gene070447.t1 | MTR_4g069810 | 36.076 | 158 | 82 | 10 | 17 | 169 | 235 | 378 | 6.30e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 63 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGCCCAACATTTCGGCTTA+TGG | 0.203861 | 3.3:+25277749 | MS.gene070447:CDS |
| TTGCCATAAGCTGAAATATT+TGG | 0.225249 | 3.3:-25277986 | None:intergenic |
| TTCTCCATAAGCTGAAATAT+TGG | 0.263465 | 3.3:-25277597 | None:intergenic |
| CGACCCAACATTTCAGCTTA+TGG | 0.265141 | 3.3:+25277437 | MS.gene070447:CDS |
| AGACCCAATATTTCAGCTTA+TGG | 0.267378 | 3.3:+25277593 | MS.gene070447:CDS |
| CGGCCTTGGTTCAAAATCTT+TGG | 0.278983 | 3.3:-25278044 | None:intergenic |
| AGACCAAATATTTCAGCTTA+TGG | 0.280649 | 3.3:+25277983 | MS.gene070447:CDS |
| AGACCCAACATTTCAGCTTA+TGG | 0.288132 | 3.3:+25273324 | MS.gene070447:CDS |
| AGACCAAACATTTCAGCTTA+TGG | 0.288132 | 3.3:+25277827 | MS.gene070447:CDS |
| TCTCCATATGCTGAAATATT+CGG | 0.293638 | 3.3:-25278064 | None:intergenic |
| GCACTAACACCAAGGAAAAT+AGG | 0.310048 | 3.3:+25273277 | MS.gene070447:CDS |
| TCTCCATAAGCTGAAATATT+GGG | 0.337654 | 3.3:-25277596 | None:intergenic |
| TAAACCACGGCCCAACATTT+CGG | 0.351056 | 3.3:+25277742 | MS.gene070447:CDS |
| TCTCCGTAAGCTGAAATATT+AGG | 0.367030 | 3.3:-25277518 | None:intergenic |
| TCTCCATAAGCTGAAATGTT+TGG | 0.381277 | 3.3:-25277830 | None:intergenic |
| ACGAGTCCTTGAATTTCTTC+CGG | 0.390801 | 3.3:-25273159 | None:intergenic |
| CTTGGTTCAAAATCTTTGAC+TGG | 0.399359 | 3.3:-25277884 | None:intergenic |
| TCTTGGTTCAAAATCCTTAG+TGG | 0.409004 | 3.3:-25277807 | None:intergenic |
| TATACTGAAATATTAGGTCT+TGG | 0.411757 | 3.3:-25273243 | None:intergenic |
| TAAGCTGAAATATTTGGTCT+TGG | 0.412506 | 3.3:-25277980 | None:intergenic |
| AGGCCGAATATTTCAGCATA+TGG | 0.414557 | 3.3:+25278061 | MS.gene070447:CDS |
| CTCTCTAAACGCCTTCTCTT+GGG | 0.415136 | 3.3:-25273211 | None:intergenic |
| AGACAATGTCATAGATGTTA+AGG | 0.416032 | 3.3:+25277460 | MS.gene070447:CDS |
| TAAGCTGAAATGTTTGGTCT+TGG | 0.428249 | 3.3:-25277824 | None:intergenic |
| CCTCTCTAAACGCCTTCTCT+TGG | 0.447209 | 3.3:-25273212 | None:intergenic |
| TAAGCTGAAATGTTGGGTCT+TGG | 0.452926 | 3.3:-25277668 | None:intergenic |
| TAAGCTGAAATGTTGGGTCT+TGG | 0.452926 | 3.3:-25277902 | None:intergenic |
| TAAGCTGAAATATTGGGTCT+TGG | 0.456037 | 3.3:-25277590 | None:intergenic |
| TAAGCTGAAATATTAGGTCT+TGG | 0.457286 | 3.3:-25277512 | None:intergenic |
| TAAGCTGAAATGTTGGGTCT+TGG | 0.464437 | 3.3:-25273321 | None:intergenic |
| GGAAAAGAGCGGAGCCACTA+AGG | 0.466210 | 3.3:+25277793 | MS.gene070447:CDS |
| TCGTGGTTCAAAATCTTTAA+CGG | 0.469737 | 3.3:-25277417 | None:intergenic |
| AGACCTAATATTTCAGCTTA+CGG | 0.471619 | 3.3:+25277515 | MS.gene070447:CDS |
| TATGCTGAAATATTCGGCCT+TGG | 0.481023 | 3.3:-25278058 | None:intergenic |
| AGACCCAACATTTCAGCTTA+CGG | 0.484733 | 3.3:+25277671 | MS.gene070447:CDS |
| AGACCCAACATTTCAGCTTA+CGG | 0.484733 | 3.3:+25277905 | MS.gene070447:CDS |
| TCTTGGTTCGAAATCATTAG+TGG | 0.489747 | 3.3:-25277651 | None:intergenic |
| TGACATTGACACCAAGGAAA+AGG | 0.493430 | 3.3:+25278012 | MS.gene070447:CDS |
| TCTCCATAAGCTGAAATGTT+GGG | 0.499953 | 3.3:-25273327 | None:intergenic |
| TCTCCATAAGCCGAAATGTT+GGG | 0.501285 | 3.3:-25277752 | None:intergenic |
| CTCTCCGTAAGCTGAAATGT+TGG | 0.503472 | 3.3:-25277675 | None:intergenic |
| CATCGATGTTAATGAAAAGA+AGG | 0.503693 | 3.3:+25277703 | MS.gene070447:CDS |
| GTCTCCGTAAGCTGAAATGT+TGG | 0.512820 | 3.3:-25277909 | None:intergenic |
| TCTCCGTAAGCTGAAATGTT+GGG | 0.513710 | 3.3:-25277674 | None:intergenic |
| TCTCCATAAGCTGAAATGTT+GGG | 0.525189 | 3.3:-25277440 | None:intergenic |
| CATGAAAGAGCAAGACATAC+CGG | 0.535405 | 3.3:+25273140 | None:intergenic |
| GTCTCCATAAGCTGAAATGT+TGG | 0.536347 | 3.3:-25273328 | None:intergenic |
| GTCTCCATAAGCTGAAATGT+TGG | 0.536347 | 3.3:-25277441 | None:intergenic |
| TCTCCGTAAGCTGAAATGTT+GGG | 0.536696 | 3.3:-25277908 | None:intergenic |
| ATTTCAGTATATGAAAATGA+TGG | 0.539974 | 3.3:+25273255 | MS.gene070447:CDS |
| ATCTCCATAAGCCGAAATGT+TGG | 0.558155 | 3.3:-25277753 | None:intergenic |
| GGGGAATTCTTGTAGTGGAA+AGG | 0.563912 | 3.3:+25277392 | MS.gene070447:intron |
| TAAGCCGAAATGTTGGGCCG+TGG | 0.565825 | 3.3:-25277746 | None:intergenic |
| GACATACCGGAAGAAATTCA+AGG | 0.576602 | 3.3:+25273153 | MS.gene070447:CDS |
| TAAGCTGAAATGTTGGGTCG+TGG | 0.596199 | 3.3:-25277434 | None:intergenic |
| AGATGATGCCATTGATGCTA+AGG | 0.596256 | 3.3:+25277772 | MS.gene070447:CDS |
| CCAAGAGAAGGCGTTTAGAG+AGG | 0.601749 | 3.3:+25273212 | MS.gene070447:CDS |
| TAAGCTCAATACCCAAGAGA+AGG | 0.615378 | 3.3:+25273200 | MS.gene070447:CDS |
| CAACAATGACATTGACACCA+AGG | 0.659301 | 3.3:+25278006 | MS.gene070447:CDS |
| TGAAAAGAAGGCAGCCACTG+AGG | 0.664629 | 3.3:+25277715 | MS.gene070447:CDS |
| CCGTGGTTTAAAATCCTCAG+TGG | 0.675588 | 3.3:-25277729 | None:intergenic |
| ATTGATGCTAAGGAAAAGAG+CGG | 0.694475 | 3.3:+25277782 | MS.gene070447:CDS |
| AAATGATGGCACTAACACCA+AGG | 0.697304 | 3.3:+25273269 | MS.gene070447:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAATTCAAATTATTAAT+TGG | + | chr3.3:25276267-25276286 | MS.gene070447:intron | 10.0% |
| !! | TTTAATTAGAATTAAAAAGT+AGG | - | chr3.3:25273752-25273771 | None:intergenic | 10.0% |
| !! | AAAAAAACTTAGTTATGAAA+AGG | + | chr3.3:25276294-25276313 | MS.gene070447:intron | 15.0% |
| !! | AAAAAATATTTATCTCCAAA+AGG | + | chr3.3:25275992-25276011 | MS.gene070447:intron | 15.0% |
| !! | AAAAATATTTATCTCCAAAA+GGG | + | chr3.3:25275993-25276012 | MS.gene070447:intron | 15.0% |
| !!! | TCTATTTATCAACTTAATTT+TGG | + | chr3.3:25274479-25274498 | MS.gene070447:intron | 15.0% |
| !!! | TTTTCATATACTGAAATATT+AGG | - | chr3.3:25273252-25273271 | None:intergenic | 15.0% |
| !!! | TTTTTTACGAAAACTATTTA+AGG | - | chr3.3:25273873-25273892 | None:intergenic | 15.0% |
| !!! | TTTTTTTATGTTTATTGTGA+TGG | - | chr3.3:25276131-25276150 | None:intergenic | 15.0% |
| !! | AAAGAATGAATAATGAAGAT+TGG | + | chr3.3:25274245-25274264 | MS.gene070447:intron | 20.0% |
| !! | ACTAAAATATAGGAGAATTA+AGG | - | chr3.3:25275377-25275396 | None:intergenic | 20.0% |
| !! | ACTAATTTACCTATTCTAAA+TGG | - | chr3.3:25275817-25275836 | None:intergenic | 20.0% |
| !! | ATCAAAATTACCTACTTATA+TGG | - | chr3.3:25275413-25275432 | None:intergenic | 20.0% |
| !! | ATGAAATACCAAATAAATAG+AGG | + | chr3.3:25276469-25276488 | MS.gene070447:intron | 20.0% |
| !! | ATTAGAATTAAAAAGTAGGA+AGG | - | chr3.3:25273748-25273767 | None:intergenic | 20.0% |
| !! | ATTTCAGTATATGAAAATGA+TGG | + | chr3.3:25273255-25273274 | MS.gene070447:CDS | 20.0% |
| !! | TATGATTGTTCAGTAAAAAA+GGG | - | chr3.3:25276223-25276242 | None:intergenic | 20.0% |
| !! | TGTAATAATTGTCAAGTTAT+TGG | - | chr3.3:25276430-25276449 | None:intergenic | 20.0% |
| !! | TTAGAATTAAAAAGTAGGAA+GGG | - | chr3.3:25273747-25273766 | None:intergenic | 20.0% |
| !! | TTCAGATTACTTAATTGAAT+AGG | - | chr3.3:25275506-25275525 | None:intergenic | 20.0% |
| !! | TTCTTTATTGAAAATTCTGA+CGG | + | chr3.3:25277211-25277230 | MS.gene070447:intron | 20.0% |
| !! | TTGTCTTAATATGTATTAAG+AGG | - | chr3.3:25274819-25274838 | None:intergenic | 20.0% |
| !!! | AAAAAAGGGGTATTTTTTTA+GGG | - | chr3.3:25276209-25276228 | None:intergenic | 20.0% |
| !!! | ATATGATGATTTTGAAGATT+TGG | + | chr3.3:25276660-25276679 | MS.gene070447:intron | 20.0% |
| !!! | TAAAAAAGGGGTATTTTTTT+AGG | - | chr3.3:25276210-25276229 | None:intergenic | 20.0% |
| !!! | TATGATGATTTTGAAGATTT+GGG | + | chr3.3:25276661-25276680 | MS.gene070447:intron | 20.0% |
| !!! | TGAAAATGAGTTCTAAAATT+GGG | + | chr3.3:25276940-25276959 | MS.gene070447:intron | 20.0% |
| !!! | TGAATGATTTTTGAAGATTT+TGG | + | chr3.3:25276721-25276740 | MS.gene070447:intron | 20.0% |
| !!! | TGTAATTATTTAATCCCTTT+TGG | - | chr3.3:25276010-25276029 | None:intergenic | 20.0% |
| !!! | TTCTTTTTCATTCCTATAAT+CGG | - | chr3.3:25274231-25274250 | None:intergenic | 20.0% |
| !!! | TTTATCAACTTAATTTTGGA+AGG | + | chr3.3:25274483-25274502 | MS.gene070447:intron | 20.0% |
| !!! | TTTGTGTTTTTACTAGTTTT+TGG | + | chr3.3:25276880-25276899 | MS.gene070447:intron | 20.0% |
| ! | AAAAGCTGCTATTAGATATT+GGG | - | chr3.3:25276175-25276194 | None:intergenic | 25.0% |
| ! | AAATACACATAGACATACAT+AGG | + | chr3.3:25275197-25275216 | MS.gene070447:intron | 25.0% |
| ! | AATACAAAATTGCATTACTG+AGG | - | chr3.3:25277360-25277379 | None:intergenic | 25.0% |
| ! | AATTGTCAAGTTATTGGATT+TGG | - | chr3.3:25276424-25276443 | None:intergenic | 25.0% |
| ! | AATTTACCTATTCTAAATGG+TGG | - | chr3.3:25275814-25275833 | None:intergenic | 25.0% |
| ! | ACTTTGGTTATGTATATTCA+TGG | - | chr3.3:25274984-25275003 | None:intergenic | 25.0% |
| ! | AGAACATATCATATAAATCG+AGG | + | chr3.3:25276580-25276599 | MS.gene070447:intron | 25.0% |
| ! | ATACAAAATTGCATTACTGA+GGG | - | chr3.3:25277359-25277378 | None:intergenic | 25.0% |
| ! | ATAGAAGAGAAGAAATTTGT+TGG | - | chr3.3:25276059-25276078 | None:intergenic | 25.0% |
| ! | ATATGTGTTTACATTATTGG+CGG | + | chr3.3:25277160-25277179 | MS.gene070447:intron | 25.0% |
| ! | ATGATTGTTCAGTAAAAAAG+GGG | - | chr3.3:25276222-25276241 | None:intergenic | 25.0% |
| ! | ATTGTCAAGTTATTGGATTT+GGG | - | chr3.3:25276423-25276442 | None:intergenic | 25.0% |
| ! | ATTTACCTATTCTAAATGGT+GGG | - | chr3.3:25275813-25275832 | None:intergenic | 25.0% |
| ! | CAAATCTGTATAAACATTAC+TGG | - | chr3.3:25273671-25273690 | None:intergenic | 25.0% |
| ! | CTATGATTGTTCAGTAAAAA+AGG | - | chr3.3:25276224-25276243 | None:intergenic | 25.0% |
| ! | CTTAATTGAATAGGCTTAAA+CGG | - | chr3.3:25275497-25275516 | None:intergenic | 25.0% |
| ! | GAACATATCATATAAATCGA+GGG | + | chr3.3:25276581-25276600 | MS.gene070447:intron | 25.0% |
| ! | GACATATGTGTTTACATTAT+TGG | + | chr3.3:25277157-25277176 | MS.gene070447:intron | 25.0% |
| ! | GTAACTCACTAAATTATTGT+GGG | + | chr3.3:25277251-25277270 | MS.gene070447:intron | 25.0% |
| ! | GTTGATGTTAAGAAAAAGAA+GGG | + | chr3.3:25277548-25277567 | MS.gene070447:CDS | 25.0% |
| ! | TAGATATTAGTCATTTACCT+TGG | - | chr3.3:25274544-25274563 | None:intergenic | 25.0% |
| ! | TATACTGAAATATTAGGTCT+TGG | - | chr3.3:25273246-25273265 | None:intergenic | 25.0% |
| ! | TCATTGTTCCTCTATTTATT+TGG | - | chr3.3:25276480-25276499 | None:intergenic | 25.0% |
| ! | TGTAACTCACTAAATTATTG+TGG | + | chr3.3:25277250-25277269 | MS.gene070447:intron | 25.0% |
| ! | TTAGAATAGGTAAATTAGTC+TGG | + | chr3.3:25275818-25275837 | MS.gene070447:intron | 25.0% |
| ! | TTATTGCTTGGTATAATTCT+AGG | - | chr3.3:25274959-25274978 | None:intergenic | 25.0% |
| ! | TTCGTAAATAACAACATTAC+TGG | + | chr3.3:25277056-25277075 | MS.gene070447:intron | 25.0% |
| !! | ACAAGAATTTTCCTTATTAC+TGG | + | chr3.3:25273381-25273400 | MS.gene070447:intron | 25.0% |
| !! | AGAGACATAATTTTTGTTGA+GGG | + | chr3.3:25276856-25276875 | MS.gene070447:intron | 25.0% |
| !! | GATTTGCTTCTAATATACTT+TGG | - | chr3.3:25275000-25275019 | None:intergenic | 25.0% |
| !! | TCAGTAATGCAATTTTGTAT+TGG | + | chr3.3:25277359-25277378 | MS.gene070447:intron | 25.0% |
| !!! | AGTTCTAAAATTGGGTTTTA+GGG | + | chr3.3:25276948-25276967 | MS.gene070447:intron | 25.0% |
| !!! | ATTTGTTATAGGATTTCGTT+TGG | - | chr3.3:25276383-25276402 | None:intergenic | 25.0% |
| !!! | CAATTTTTAGACACCATTTT+AGG | + | chr3.3:25274702-25274721 | MS.gene070447:intron | 25.0% |
| !!! | GAAAACGATTGATTTGTTAT+AGG | - | chr3.3:25276394-25276413 | None:intergenic | 25.0% |
| !!! | GTGAAAATGAGTTCTAAAAT+TGG | + | chr3.3:25276939-25276958 | MS.gene070447:intron | 25.0% |
| !!! | TAACTTTATTGAGGGTTTTT+TGG | + | chr3.3:25277287-25277306 | MS.gene070447:intron | 25.0% |
| !!! | TCAGTTTGTTACTTTATCTT+AGG | - | chr3.3:25274100-25274119 | None:intergenic | 25.0% |
| !!! | TTGCTTTTAATTATCAATCC+AGG | + | chr3.3:25276078-25276097 | MS.gene070447:intron | 25.0% |
| !!! | TTTGTATTGGTTAGTAGATT+GGG | + | chr3.3:25277372-25277391 | MS.gene070447:intron | 25.0% |
| !!! | TTTTGACAAAGCATTACTAA+GGG | - | chr3.3:25273618-25273637 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTGAGATTTGAAA+CGG | + | chr3.3:25276738-25276757 | MS.gene070447:intron | 25.0% |
| !!! | TTTTGTATTGGTTAGTAGAT+TGG | + | chr3.3:25277371-25277390 | MS.gene070447:intron | 25.0% |
| AAAAAGGTCCATTACATTAC+TGG | - | chr3.3:25273715-25273734 | None:intergenic | 30.0% | |
| AAAGCTGCTATTAGATATTG+GGG | - | chr3.3:25276174-25276193 | None:intergenic | 30.0% | |
| AACCTACGAATTATTACTGA+GGG | - | chr3.3:25277193-25277212 | None:intergenic | 30.0% | |
| ACAATCATAGCTCAAATTGT+TGG | + | chr3.3:25276234-25276253 | MS.gene070447:intron | 30.0% | |
| AGAATTAAGGATGTTTGGAA+GGG | - | chr3.3:25275364-25275383 | None:intergenic | 30.0% | |
| AGACAATGACATTGAAGTTA+AGG | + | chr3.3:25273347-25273366 | MS.gene070447:intron | 30.0% | |
| AGACAATGTCATAGATGTTA+AGG | + | chr3.3:25277460-25277479 | MS.gene070447:CDS | 30.0% | |
| AGACCAAATATTTCAGCTTA+TGG | + | chr3.3:25277983-25278002 | MS.gene070447:CDS | 30.0% | |
| AGACCTAATATTTCAGCTTA+CGG | + | chr3.3:25277515-25277534 | MS.gene070447:CDS | 30.0% | |
| ATAGGAGAATTAAGGATGTT+TGG | - | chr3.3:25275369-25275388 | None:intergenic | 30.0% | |
| ATATGTCTTTGCTTTACTGA+GGG | - | chr3.3:25277144-25277163 | None:intergenic | 30.0% | |
| ATCTGTATAAACATTACTGG+CGG | - | chr3.3:25273668-25273687 | None:intergenic | 30.0% | |
| ATGCAAATAGGAGAAACATA+AGG | - | chr3.3:25275465-25275484 | None:intergenic | 30.0% | |
| ATTATGCATGTCAGCATTTA+AGG | + | chr3.3:25274334-25274353 | MS.gene070447:intron | 30.0% | |
| CAAAAGCTGCTATTAGATAT+TGG | - | chr3.3:25276176-25276195 | None:intergenic | 30.0% | |
| CATCGATGTTAATGAAAAGA+AGG | + | chr3.3:25277703-25277722 | MS.gene070447:CDS | 30.0% | |
| CGTTGATGTTAAGAAAAAGA+AGG | + | chr3.3:25277547-25277566 | MS.gene070447:CDS | 30.0% | |
| CTGCAGTATGACTAAAATAT+AGG | - | chr3.3:25275387-25275406 | None:intergenic | 30.0% | |
| GAAAATGAATATGATGTACC+TGG | + | chr3.3:25275539-25275558 | MS.gene070447:intron | 30.0% | |
| GAATCACAAATTCATGTACA+AGG | + | chr3.3:25274656-25274675 | MS.gene070447:intron | 30.0% | |
| GATTATTTCCACCAGTAATA+AGG | - | chr3.3:25273395-25273414 | None:intergenic | 30.0% | |
| GTAAATAACAACATTACTGG+CGG | + | chr3.3:25277059-25277078 | MS.gene070447:intron | 30.0% | |
| GTTGGATATTTGATGAGTAA+AGG | - | chr3.3:25276041-25276060 | None:intergenic | 30.0% | |
| TAAGCTGAAATATTAGGTCT+TGG | - | chr3.3:25277515-25277534 | None:intergenic | 30.0% | |
| TAAGCTGAAATATTTGGTCT+TGG | - | chr3.3:25277983-25278002 | None:intergenic | 30.0% | |
| TCGTGGTTCAAAATCTTTAA+CGG | - | chr3.3:25277420-25277439 | None:intergenic | 30.0% | |
| TCTCCATAAGCTGAAATATT+GGG | - | chr3.3:25277599-25277618 | None:intergenic | 30.0% | |
| TCTCCATATGCTGAAATATT+CGG | - | chr3.3:25278067-25278086 | None:intergenic | 30.0% | |
| TGCAAATAGGAGAAACATAA+GGG | - | chr3.3:25275464-25275483 | None:intergenic | 30.0% | |
| TTAACTTATGTCTCAACACT+TGG | - | chr3.3:25275032-25275051 | None:intergenic | 30.0% | |
| TTAGTGAGTTACATTACTGA+CGG | - | chr3.3:25277243-25277262 | None:intergenic | 30.0% | |
| TTCTCCATAAGCTGAAATAT+TGG | - | chr3.3:25277600-25277619 | None:intergenic | 30.0% | |
| TTGAGACATAAGTTAAGAAG+TGG | + | chr3.3:25275036-25275055 | MS.gene070447:intron | 30.0% | |
| TTGCCATAAGCTGAAATATT+TGG | - | chr3.3:25277989-25278008 | None:intergenic | 30.0% | |
| ! | AGAATTTTCCTTATTACTGG+TGG | + | chr3.3:25273384-25273403 | MS.gene070447:intron | 30.0% |
| ! | GAGAGACATAATTTTTGTTG+AGG | + | chr3.3:25276855-25276874 | MS.gene070447:intron | 30.0% |
| ! | GTTACTTTATCTTAGGTAAC+AGG | - | chr3.3:25274093-25274112 | None:intergenic | 30.0% |
| ! | TGATGGTAAAGTTGTTGTTA+TGG | - | chr3.3:25275729-25275748 | None:intergenic | 30.0% |
| ! | TTGGTATTTTCGTGTTAGAT+GGG | + | chr3.3:25276899-25276918 | MS.gene070447:intron | 30.0% |
| ! | TTTGGTATTTTCGTGTTAGA+TGG | + | chr3.3:25276898-25276917 | MS.gene070447:intron | 30.0% |
| !! | ACTTAATTTTGGAAGGAAGA+CGG | + | chr3.3:25274490-25274509 | MS.gene070447:intron | 30.0% |
| !! | ATATTCATGGCTTTATTGCT+TGG | - | chr3.3:25274971-25274990 | None:intergenic | 30.0% |
| !! | ATTGAGCTTACTTTTAGTGT+TGG | - | chr3.3:25273190-25273209 | None:intergenic | 30.0% |
| !! | ATTGTTGCTTTAATTACTGG+CGG | + | chr3.3:25277012-25277031 | MS.gene070447:intron | 30.0% |
| !! | GTTTTGACAAAGCATTACTA+AGG | - | chr3.3:25273619-25273638 | None:intergenic | 30.0% |
| !! | TTGTATTGGTTAGTAGATTG+GGG | + | chr3.3:25277373-25277392 | MS.gene070447:intron | 30.0% |
| !! | TTTTGACAAAGCATTACTGA+GGG | + | chr3.3:25273532-25273551 | MS.gene070447:intron | 30.0% |
| !!! | AAGCTCTTTTGAGATTAACT+AGG | - | chr3.3:25275903-25275922 | None:intergenic | 30.0% |
| !!! | GAGTTCTAAAATTGGGTTTT+AGG | + | chr3.3:25276947-25276966 | MS.gene070447:intron | 30.0% |
| !!! | TAAAATTGGGTTTTAGGGTT+TGG | + | chr3.3:25276953-25276972 | MS.gene070447:intron | 30.0% |
| AAACTAACTCCTCATTACTG+AGG | - | chr3.3:25273515-25273534 | None:intergenic | 35.0% | |
| AAATGCTGACATGCATAATG+TGG | - | chr3.3:25274333-25274352 | None:intergenic | 35.0% | |
| AAATTCCGCCAGTAATGTAA+TGG | + | chr3.3:25273704-25273723 | MS.gene070447:intron | 35.0% | |
| AACTAACTCCTCATTACTGA+GGG | - | chr3.3:25273514-25273533 | None:intergenic | 35.0% | |
| AAGCATGCATCTTACAATAG+TGG | - | chr3.3:25274735-25274754 | None:intergenic | 35.0% | |
| AAGCTGCTATTAGATATTGG+GGG | - | chr3.3:25276173-25276192 | None:intergenic | 35.0% | |
| AATTGCTAAGATCATGAAGG+TGG | + | chr3.3:25274581-25274600 | MS.gene070447:intron | 35.0% | |
| ACCCTCAATAAAGTTACTGA+CGG | - | chr3.3:25277283-25277302 | None:intergenic | 35.0% | |
| AGACCAAACATTTCAGCTTA+TGG | + | chr3.3:25277827-25277846 | MS.gene070447:CDS | 35.0% | |
| AGACCCAATATTTCAGCTTA+TGG | + | chr3.3:25277593-25277612 | MS.gene070447:CDS | 35.0% | |
| AGGGAGATGAATAGTATGTT+AGG | - | chr3.3:25275445-25275464 | None:intergenic | 35.0% | |
| AGTGAGATAAACTGAATCGA+GGG | + | chr3.3:25276610-25276629 | MS.gene070447:intron | 35.0% | |
| ATCCCTCAGTAATAATTCGT+AGG | + | chr3.3:25277188-25277207 | MS.gene070447:intron | 35.0% | |
| ATTATTCCGCCAGTAATTAC+TGG | + | chr3.3:25273555-25273574 | MS.gene070447:intron | 35.0% | |
| ATTGATGCTAAGGAAAAGAG+CGG | + | chr3.3:25277782-25277801 | MS.gene070447:CDS | 35.0% | |
| ATTGCATTACTGAGGGATTT+AGG | - | chr3.3:25277352-25277371 | None:intergenic | 35.0% | |
| CATATGTCTTTGCTTTACTG+AGG | - | chr3.3:25277145-25277164 | None:intergenic | 35.0% | |
| CCTTCATGATCTTAGCAATT+CGG | - | chr3.3:25274581-25274600 | None:intergenic | 35.0% | |
| CGGAAAACATGTATGCAAAT+AGG | - | chr3.3:25275477-25275496 | None:intergenic | 35.0% | |
| CTTGGTTCAAAATCTTTGAC+TGG | - | chr3.3:25273306-25273325 | None:intergenic | 35.0% | |
| GAACCTACGAATTATTACTG+AGG | - | chr3.3:25277194-25277213 | None:intergenic | 35.0% | |
| GAAGAAGATGAAATTGACGA+CGG | - | chr3.3:25276536-25276555 | None:intergenic | 35.0% | |
| GAATTAAGGATGTTTGGAAG+GGG | - | chr3.3:25275363-25275382 | None:intergenic | 35.0% | |
| GAGAATTAAGGATGTTTGGA+AGG | - | chr3.3:25275365-25275384 | None:intergenic | 35.0% | |
| GCATTGAAGACACATACTAA+TGG | + | chr3.3:25275330-25275349 | MS.gene070447:intron | 35.0% | |
| GGAAGGGATCACAAAAAAAA+AGG | - | chr3.3:25273731-25273750 | None:intergenic | 35.0% | |
| TAAGCTGAAATATTGGGTCT+TGG | - | chr3.3:25277593-25277612 | None:intergenic | 35.0% | |
| TAAGCTGAAATGTTTGGTCT+TGG | - | chr3.3:25277827-25277846 | None:intergenic | 35.0% | |
| TATGTGTACGTGTATGTTCT+GGG | - | chr3.3:25275299-25275318 | None:intergenic | 35.0% | |
| TCCGTCAGTAACTTTATTGA+GGG | + | chr3.3:25277279-25277298 | MS.gene070447:intron | 35.0% | |
| TCTCCATAAGCTGAAATGTT+GGG | - | chr3.3:25273330-25273349 | None:intergenic | 35.0% | |
| TCTCCATAAGCTGAAATGTT+TGG | - | chr3.3:25273330-25273349 | None:intergenic | 35.0% | |
| TCTCCGTAAGCTGAAATATT+AGG | - | chr3.3:25277521-25277540 | None:intergenic | 35.0% | |
| TCTTGGTTCAAAATCCTTAG+TGG | - | chr3.3:25277810-25277829 | None:intergenic | 35.0% | |
| TGATTCAACGAAGAGGATTT+GGG | + | chr3.3:25276823-25276842 | MS.gene070447:intron | 35.0% | |
| TTATGTGTACGTGTATGTTC+TGG | - | chr3.3:25275300-25275319 | None:intergenic | 35.0% | |
| TTCCGTCAGTAACTTTATTG+AGG | + | chr3.3:25277278-25277297 | MS.gene070447:intron | 35.0% | |
| TTCTTCTTCAATGATTCACG+AGG | - | chr3.3:25276641-25276660 | None:intergenic | 35.0% | |
| ! | ACCTGGTCTTTGATAAAATG+AGG | + | chr3.3:25275556-25275575 | MS.gene070447:intron | 35.0% |
| ! | GACATCTTTCCTATTTTCCT+TGG | - | chr3.3:25273289-25273308 | None:intergenic | 35.0% |
| ! | TCCTCATTTTATCAAAGACC+AGG | - | chr3.3:25275560-25275579 | None:intergenic | 35.0% |
| ! | TCTTGGTTCGAAATCATTAG+TGG | - | chr3.3:25277654-25277673 | None:intergenic | 35.0% |
| ! | TGGTAAAGTTGTTGTTATGG+TGG | - | chr3.3:25275726-25275745 | None:intergenic | 35.0% |
| ! | TGTTAGATGGGTTTCAGATT+GGG | + | chr3.3:25276911-25276930 | MS.gene070447:intron | 35.0% |
| ! | TTAGGGTTTGGTTTCAATAC+TGG | + | chr3.3:25276965-25276984 | MS.gene070447:intron | 35.0% |
| ! | TTGAGATTTGAAACGGAAAG+AGG | + | chr3.3:25276745-25276764 | MS.gene070447:intron | 35.0% |
| !! | AACAGGTTTTGTACTAGAAG+AGG | - | chr3.3:25274064-25274083 | None:intergenic | 35.0% |
| !! | CGGATTGTTGCTTTAATTAC+TGG | + | chr3.3:25277009-25277028 | MS.gene070447:intron | 35.0% |
| !! | GAATGATGGATTGTGAGTTT+AGG | + | chr3.3:25274037-25274056 | MS.gene070447:intron | 35.0% |
| !! | GTTTTGACAAAGCATTACTG+AGG | + | chr3.3:25273531-25273550 | MS.gene070447:intron | 35.0% |
| !!! | AGGGATTTTTTGCATTACTG+GGG | - | chr3.3:25273418-25273437 | None:intergenic | 35.0% |
| !!! | GAGGGATTTTTTGCATTACT+GGG | - | chr3.3:25273419-25273438 | None:intergenic | 35.0% |
| !!! | GGGTATTTTTTTAGGGTGAA+GGG | - | chr3.3:25276202-25276221 | None:intergenic | 35.0% |
| !!! | GGTTTTTTGGATGTTACTGA+AGG | + | chr3.3:25277300-25277319 | MS.gene070447:intron | 35.0% |
| !!! | TGAGGGATTTTTTGCATTAC+TGG | - | chr3.3:25273420-25273439 | None:intergenic | 35.0% |
| AAACTACCTCTCCATTACTG+AGG | + | chr3.3:25273635-25273654 | MS.gene070447:intron | 40.0% | |
| AAATGATGGCACTAACACCA+AGG | + | chr3.3:25273269-25273288 | MS.gene070447:CDS | 40.0% | |
| AACTACCTCTCCATTACTGA+GGG | + | chr3.3:25273636-25273655 | MS.gene070447:intron | 40.0% | |
| AAGACGGAAAATCATGAAGG+TGG | + | chr3.3:25274506-25274525 | MS.gene070447:intron | 40.0% | |
| AAGGTCCATTACATTACTGG+CGG | - | chr3.3:25273712-25273731 | None:intergenic | 40.0% | |
| AATCCGTCAGTAATTACTGG+CGG | + | chr3.3:25273586-25273605 | MS.gene070447:intron | 40.0% | |
| AATGTGGCAAGGTTCTTAGT+TGG | - | chr3.3:25274317-25274336 | None:intergenic | 40.0% | |
| ACGAGTCCTTGAATTTCTTC+CGG | - | chr3.3:25273162-25273181 | None:intergenic | 40.0% | |
| ACTGCAGCAACCATATAAGT+AGG | + | chr3.3:25275400-25275419 | MS.gene070447:intron | 40.0% | |
| AGACCCAACATTTCAGCTTA+CGG | + | chr3.3:25273324-25273343 | MS.gene070447:CDS | 40.0% | |
| AGACCCAACATTTCAGCTTA+TGG | + | chr3.3:25273324-25273343 | MS.gene070447:CDS | 40.0% | |
| AGATGATGCCATTGATGCTA+AGG | + | chr3.3:25277772-25277791 | MS.gene070447:CDS | 40.0% | |
| AGATTGGGGAATTCTTGTAG+TGG | + | chr3.3:25277387-25277406 | MS.gene070447:intron | 40.0% | |
| AGGAAGACGGAAAATCATGA+AGG | + | chr3.3:25274503-25274522 | MS.gene070447:intron | 40.0% | |
| AGGCCGAATATTTCAGCATA+TGG | + | chr3.3:25278061-25278080 | MS.gene070447:CDS | 40.0% | |
| ATAGCAACTGCTAACAGACT+TGG | - | chr3.3:25274362-25274381 | None:intergenic | 40.0% | |
| ATCCGTCAGCAATGGTATAA+CGG | - | chr3.3:25277116-25277135 | None:intergenic | 40.0% | |
| ATCTCCATAAGCCGAAATGT+TGG | - | chr3.3:25277756-25277775 | None:intergenic | 40.0% | |
| ATGAGCGTCAGAAATGTTAC+TGG | + | chr3.3:25273479-25273498 | MS.gene070447:intron | 40.0% | |
| ATTCCGCCAGTAATTACTGA+CGG | - | chr3.3:25277345-25277326 | None:intergenic | 40.0% | |
| ATTCCGCCAGTAATTACTGA+GGG | + | chr3.3:25277326-25277345 | MS.gene070447:intron | 40.0% | |
| CAACAATGACATTGACACCA+AGG | + | chr3.3:25278006-25278025 | MS.gene070447:CDS | 40.0% | |
| CCAGTAATGCGTATTACTGA+GGG | - | chr3.3:25273437-25273456 | None:intergenic | 40.0% | |
| CCGAATTGCTAAGATCATGA+AGG | + | chr3.3:25274578-25274597 | MS.gene070447:intron | 40.0% | |
| CTCTGTACATGAATGTGTGT+TGG | - | chr3.3:25274682-25274701 | None:intergenic | 40.0% | |
| CTTGCTGATGTATCAGTTCA+AGG | + | chr3.3:25274752-25274771 | MS.gene070447:intron | 40.0% | |
| GACATACCGGAAGAAATTCA+AGG | + | chr3.3:25273153-25273172 | MS.gene070447:CDS | 40.0% | |
| GAGTGAGATAAACTGAATCG+AGG | + | chr3.3:25276609-25276628 | MS.gene070447:intron | 40.0% | |
| GATAAACTGAATCGAGGGTT+TGG | + | chr3.3:25276615-25276634 | MS.gene070447:intron | 40.0% | |
| GCACTAACACCAAGGAAAAT+AGG | + | chr3.3:25273277-25273296 | MS.gene070447:CDS | 40.0% | |
| GTCTCCATAAGCTGAAATGT+TGG | - | chr3.3:25273331-25273350 | None:intergenic | 40.0% | |
| GTGATTCAACGAAGAGGATT+TGG | + | chr3.3:25276822-25276841 | MS.gene070447:intron | 40.0% | |
| TAAGCTCAATACCCAAGAGA+AGG | + | chr3.3:25273200-25273219 | MS.gene070447:CDS | 40.0% | |
| TAAGCTGAAATGTTGGGTCT+TGG | - | chr3.3:25273324-25273343 | None:intergenic | 40.0% | |
| TATGCTGAAATATTCGGCCT+TGG | - | chr3.3:25278061-25278080 | None:intergenic | 40.0% | |
| TATTCCGCCAGTAATTACTG+AGG | + | chr3.3:25273557-25273576 | MS.gene070447:intron | 40.0% | |
| TCAGTAATACGCATTACTGG+CGG | + | chr3.3:25273437-25273456 | MS.gene070447:intron | 40.0% | |
| TCGGAACAAAGGATGAATGA+TGG | + | chr3.3:25274023-25274042 | MS.gene070447:intron | 40.0% | |
| TCTCCATAAGCCGAAATGTT+GGG | - | chr3.3:25277755-25277774 | None:intergenic | 40.0% | |
| TCTCCGTAAGCTGAAATGTT+GGG | - | chr3.3:25277677-25277696 | None:intergenic | 40.0% | |
| TCTGACGCTCATATTACTGA+GGG | - | chr3.3:25273471-25273490 | None:intergenic | 40.0% | |
| TCTTGATGCTTCATGAAACC+TGG | - | chr3.3:25276099-25276118 | None:intergenic | 40.0% | |
| TGACATTGACACCAAGGAAA+AGG | + | chr3.3:25278012-25278031 | MS.gene070447:CDS | 40.0% | |
| TGCAATCCGTCAGTAATTAC+TGG | + | chr3.3:25273583-25273602 | MS.gene070447:intron | 40.0% | |
| TTCCGTTATACCATTGCTGA+CGG | + | chr3.3:25277111-25277130 | MS.gene070447:intron | 40.0% | |
| TTCTGACGCTCATATTACTG+AGG | - | chr3.3:25273472-25273491 | None:intergenic | 40.0% | |
| TTGACGACGGTGTTCAATTT+AGG | - | chr3.3:25276523-25276542 | None:intergenic | 40.0% | |
| TTTAGGCCCTCAGTAATTAC+TGG | - | chr3.3:25277335-25277354 | None:intergenic | 40.0% | |
| ! | AAGAGGTTTGAGATTCAACG+CGG | + | chr3.3:25276762-25276781 | MS.gene070447:intron | 40.0% |
| ! | CCACTGAGGATTTTAAACCA+CGG | + | chr3.3:25277729-25277748 | MS.gene070447:CDS | 40.0% |
| ! | CCATGAAACTTTTCAACACC+AGG | + | chr3.3:25275610-25275629 | MS.gene070447:intron | 40.0% |
| ! | CCTGGTGTTGAAAAGTTTCA+TGG | - | chr3.3:25275613-25275632 | None:intergenic | 40.0% |
| ! | CGGATCTTTTGAATTACTGG+CGG | + | chr3.3:25277079-25277098 | MS.gene070447:intron | 40.0% |
| ! | CTGCCAAAGATTTTGAACCA+AGG | + | chr3.3:25278041-25278060 | MS.gene070447:CDS | 40.0% |
| ! | GCTCTTTTCCTTAGCATCAA+TGG | - | chr3.3:25277783-25277802 | None:intergenic | 40.0% |
| ! | GGAATTTTCCCTCAGTAATG+AGG | + | chr3.3:25273503-25273522 | MS.gene070447:intron | 40.0% |
| ! | GGATTTGGTTTCAATACTGG+CGG | + | chr3.3:25276989-25277008 | MS.gene070447:intron | 40.0% |
| ! | GTGTTAGATGGGTTTCAGAT+TGG | + | chr3.3:25276910-25276929 | MS.gene070447:intron | 40.0% |
| ! | GTTAGATGGGTTTCAGATTG+GGG | + | chr3.3:25276912-25276931 | MS.gene070447:intron | 40.0% |
| ! | GTTGTTATGGTGGAAGCATA+CGG | - | chr3.3:25275716-25275735 | None:intergenic | 40.0% |
| ! | TAGGTAACAGGCATTGTAAC+AGG | - | chr3.3:25274081-25274100 | None:intergenic | 40.0% |
| ! | TTAGATGGGTTTCAGATTGG+GGG | + | chr3.3:25276913-25276932 | MS.gene070447:intron | 40.0% |
| !! | AAGAGGATTTGGGTTTTCAG+GGG | + | chr3.3:25276833-25276852 | MS.gene070447:intron | 40.0% |
| !! | ATTTTCCCTCAGTAATGGAG+AGG | - | chr3.3:25273644-25273663 | None:intergenic | 40.0% |
| !! | CTATTCTAAATGGTGGGTCA+GGG | - | chr3.3:25275807-25275826 | None:intergenic | 40.0% |
| !! | GAAGAGGATTTGGGTTTTCA+GGG | + | chr3.3:25276832-25276851 | MS.gene070447:intron | 40.0% |
| !! | TAGACACCATTTTAGGTCCA+AGG | + | chr3.3:25274709-25274728 | MS.gene070447:intron | 40.0% |
| !! | TGGCGGATCTTTTGAATTAC+TGG | + | chr3.3:25277076-25277095 | MS.gene070447:intron | 40.0% |
| !!! | GGGATTTTTTGCATTACTGG+GGG | - | chr3.3:25273417-25273436 | None:intergenic | 40.0% |
| !!! | GGGGTATTTTTTTAGGGTGA+AGG | - | chr3.3:25276203-25276222 | None:intergenic | 40.0% |
| AATACGAGCAGCAAATCACC+AGG | - | chr3.3:25273990-25274009 | None:intergenic | 45.0% | |
| AATCCGCCAGTAATTACTGG+CGG | - | chr3.3:25273564-25273583 | None:intergenic | 45.0% | |
| ACTGACGTGATTCAACGAAG+AGG | + | chr3.3:25276816-25276835 | MS.gene070447:intron | 45.0% | |
| AGCGTCAGAAATGTTACTGG+CGG | + | chr3.3:25273482-25273501 | MS.gene070447:intron | 45.0% | |
| ATTCCGCCAGTAATTACTGG+CGG | + | chr3.3:25273558-25273577 | MS.gene070447:intron | 45.0% | |
| CCCTCAGTAATACGCATTAC+TGG | + | chr3.3:25273434-25273453 | MS.gene070447:intron | 45.0% | |
| CGACCCAACATTTCAGCTTA+TGG | + | chr3.3:25277437-25277456 | MS.gene070447:CDS | 45.0% | |
| CGGCCTTGGTTCAAAATCTT+TGG | - | chr3.3:25278047-25278066 | None:intergenic | 45.0% | |
| CTCTCCGTAAGCTGAAATGT+TGG | - | chr3.3:25277678-25277697 | None:intergenic | 45.0% | |
| CTCTCTAAACGCCTTCTCTT+GGG | - | chr3.3:25273214-25273233 | None:intergenic | 45.0% | |
| CTGACATGCATAATGTGGCA+AGG | - | chr3.3:25274328-25274347 | None:intergenic | 45.0% | |
| GAATCCGTCAGTAACGCATA+CGG | - | chr3.3:25277039-25277058 | None:intergenic | 45.0% | |
| GCATCTTACAATAGTGGCCT+TGG | - | chr3.3:25274729-25274748 | None:intergenic | 45.0% | |
| GCCAGTAATGCGTATTACTG+AGG | - | chr3.3:25273438-25273457 | None:intergenic | 45.0% | |
| GGTGGCATGCTGAATTATCA+AGG | + | chr3.3:25274599-25274618 | MS.gene070447:intron | 45.0% | |
| GTCTCCGTAAGCTGAAATGT+TGG | - | chr3.3:25277912-25277931 | None:intergenic | 45.0% | |
| TAAACCACGGCCCAACATTT+CGG | + | chr3.3:25277742-25277761 | MS.gene070447:CDS | 45.0% | |
| TAAGCTGAAATGTTGGGTCG+TGG | - | chr3.3:25277437-25277456 | None:intergenic | 45.0% | |
| TCAACGAAGATGACAAGCGT+TGG | + | chr3.3:25276692-25276711 | MS.gene070447:intron | 45.0% | |
| TGCAATCCGCCAGTAATTAC+TGG | - | chr3.3:25273567-25273586 | None:intergenic | 45.0% | |
| TGCGAGATCAAGCCGATTAT+AGG | + | chr3.3:25274216-25274235 | MS.gene070447:intron | 45.0% | |
| TTTGCTGCTCGTATTTCCTC+CGG | + | chr3.3:25273995-25274014 | MS.gene070447:intron | 45.0% | |
| ! | CCGTGGTTTAAAATCCTCAG+TGG | - | chr3.3:25277732-25277751 | None:intergenic | 45.0% |
| ! | CCTGACCCACCATTTAGAAT+AGG | + | chr3.3:25275805-25275824 | MS.gene070447:intron | 45.0% |
| ! | CTTGTTGAGTGATGGAGTTG+TGG | - | chr3.3:25275758-25275777 | None:intergenic | 45.0% |
| ! | GCGGAATTTTCCCTCAGTAA+TGG | - | chr3.3:25273520-25273501 | None:intergenic | 45.0% |
| ! | GGCGGATTTGGTTTCAATAC+TGG | + | chr3.3:25276986-25277005 | MS.gene070447:intron | 45.0% |
| ! | GGGGAATTCTTGTAGTGGAA+AGG | + | chr3.3:25277392-25277411 | MS.gene070447:intron | 45.0% |
| ! | GGGTTTGGTTTCAATACTGG+CGG | + | chr3.3:25276968-25276987 | MS.gene070447:intron | 45.0% |
| ! | GTTTGAGATTCAACGCGGAA+GGG | + | chr3.3:25276767-25276786 | MS.gene070447:intron | 45.0% |
| ! | TAGTGGCCTTGGACCTAAAA+TGG | - | chr3.3:25274718-25274737 | None:intergenic | 45.0% |
| !! | CCTATTCTAAATGGTGGGTC+AGG | - | chr3.3:25275808-25275827 | None:intergenic | 45.0% |
| !! | CGAAGAGGATTTGGGTTTTC+AGG | + | chr3.3:25276831-25276850 | MS.gene070447:intron | 45.0% |
| !! | GGTTTCAATACTGGCGGATT+TGG | + | chr3.3:25276974-25276993 | MS.gene070447:intron | 45.0% |
| AAATCACCAGGAGGGAGACT+AGG | - | chr3.3:25273978-25273997 | None:intergenic | 50.0% | |
| AGGCCCTCAGTAATTACTGG+CGG | - | chr3.3:25277332-25277351 | None:intergenic | 50.0% | |
| ATCCTTTGTTCCGATGCCAC+CGG | - | chr3.3:25274017-25274036 | None:intergenic | 50.0% | |
| CCTCTCTAAACGCCTTCTCT+TGG | - | chr3.3:25273215-25273234 | None:intergenic | 50.0% | |
| TGAAAAGAAGGCAGCCACTG+AGG | + | chr3.3:25277715-25277734 | MS.gene070447:CDS | 50.0% | |
| TTTGTTCCTAGTCTCCCTCC+TGG | + | chr3.3:25273969-25273988 | MS.gene070447:intron | 50.0% | |
| ! | GGCAGCTTTCTCCTTTTCCT+TGG | - | chr3.3:25278026-25278045 | None:intergenic | 50.0% |
| ! | GGTTTGAGATTCAACGCGGA+AGG | + | chr3.3:25276766-25276785 | MS.gene070447:intron | 50.0% |
| ! | GTTATGGTGGAAGCATACGG+AGG | - | chr3.3:25275713-25275732 | None:intergenic | 50.0% |
| ! | GTTGAGTGATGGAGTTGTGG+TGG | - | chr3.3:25275755-25275774 | None:intergenic | 50.0% |
| !! | AAGTCGGGCTTGTTGAGTGA+TGG | - | chr3.3:25275766-25275785 | None:intergenic | 50.0% |
| !! | AGAGGTGGTGGTGGAATAAC+CGG | - | chr3.3:25275677-25275696 | None:intergenic | 50.0% |
| !! | ATAACCGGTGGCGTTGATGA+CGG | - | chr3.3:25275662-25275681 | None:intergenic | 50.0% |
| !! | CCAAGAGAAGGCGTTTAGAG+AGG | + | chr3.3:25273212-25273231 | MS.gene070447:CDS | 50.0% |
| !! | TTCTAAATGGTGGGTCAGGG+AGG | - | chr3.3:25275804-25275823 | None:intergenic | 50.0% |
| ACGAGCAGCAAATCACCAGG+AGG | - | chr3.3:25273987-25274006 | None:intergenic | 55.0% | |
| CCAAGACATGCTGTGCTTCC+TGG | - | chr3.3:25275631-25275650 | None:intergenic | 55.0% | |
| CGAGCAGCAAATCACCAGGA+GGG | - | chr3.3:25273986-25274005 | None:intergenic | 55.0% | |
| CGGACCGTATGCGTTACTGA+CGG | + | chr3.3:25277032-25277051 | MS.gene070447:intron | 55.0% | |
| CGGCCCAACATTTCGGCTTA+TGG | + | chr3.3:25277749-25277768 | MS.gene070447:CDS | 55.0% | |
| CGTATTTCCTCCGGTGGCAT+CGG | + | chr3.3:25274004-25274023 | MS.gene070447:intron | 55.0% | |
| GGAAAAGAGCGGAGCCACTA+AGG | + | chr3.3:25277793-25277812 | MS.gene070447:CDS | 55.0% | |
| GGTGGCATGCTGAACTACCA+AGG | + | chr3.3:25274524-25274543 | MS.gene070447:intron | 55.0% | |
| TAAGCCGAAATGTTGGGCCG+TGG | - | chr3.3:25277749-25277768 | None:intergenic | 55.0% | |
| TGGAGTTGTGGTGGCTGTGA+TGG | - | chr3.3:25275746-25275765 | None:intergenic | 55.0% | |
| ! | ATGGTGGAAGCATACGGAGG+AGG | - | chr3.3:25275710-25275729 | None:intergenic | 55.0% |
| ! | CCAGGAAGCACAGCATGTCT+TGG | + | chr3.3:25275628-25275647 | MS.gene070447:intron | 55.0% |
| !! | TAAATGGTGGGTCAGGGAGG+TGG | - | chr3.3:25275801-25275820 | None:intergenic | 55.0% |
| ACCACCGTCATCAACGCCAC+CGG | + | chr3.3:25275655-25275674 | MS.gene070447:intron | 60.0% | |
| CTTTGTTCCGATGCCACCGG+AGG | - | chr3.3:25274014-25274033 | None:intergenic | 60.0% | |
| GCTGCTCGTATTTCCTCCGG+TGG | + | chr3.3:25273998-25274017 | MS.gene070447:intron | 60.0% | |
| GGAGGAAGCTTGAGAGGTGG+TGG | - | chr3.3:25275689-25275708 | None:intergenic | 60.0% | |
| GGAGGAGGAAGCTTGAGAGG+TGG | - | chr3.3:25275692-25275711 | None:intergenic | 60.0% | |
| GGAGGAGGAGGAAGCTTGAG+AGG | - | chr3.3:25275695-25275714 | None:intergenic | 60.0% | |
| GTGGTGAGTGGCGGTGAAGT+CGG | - | chr3.3:25275782-25275801 | None:intergenic | 60.0% | |
| TGGTGAGTGGCGGTGAAGTC+GGG | - | chr3.3:25275781-25275800 | None:intergenic | 60.0% | |
| ! | CTCCGGTGGCATCGGAACAA+AGG | + | chr3.3:25274012-25274031 | MS.gene070447:intron | 60.0% |
| ! | GGAAGCTTGAGAGGTGGTGG+TGG | - | chr3.3:25275686-25275705 | None:intergenic | 60.0% |
| ! | GTGGAAGCATACGGAGGAGG+AGG | - | chr3.3:25275707-25275726 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGAATAACCGG+TGG | - | chr3.3:25275674-25275693 | None:intergenic | 60.0% |
| GTCAGGGAGGTGGTGAGTGG+CGG | - | chr3.3:25275791-25275810 | None:intergenic | 65.0% | |
| TGGGTCAGGGAGGTGGTGAG+TGG | - | chr3.3:25275794-25275813 | None:intergenic | 65.0% | |
| !! | ACCGGTGGCGTTGATGACGG+TGG | - | chr3.3:25275659-25275678 | None:intergenic | 65.0% |
| !! | GGTGGCGTTGATGACGGTGG+TGG | - | chr3.3:25275656-25275675 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 25273141 | 25278093 | 25273141 | ID=MS.gene070447 |
| chr3.3 | mRNA | 25273141 | 25278093 | 25273141 | ID=MS.gene070447.t1;Parent=MS.gene070447 |
| chr3.3 | exon | 25273141 | 25273362 | 25273141 | ID=MS.gene070447.t1.exon1;Parent=MS.gene070447.t1 |
| chr3.3 | CDS | 25273141 | 25273362 | 25273141 | ID=cds.MS.gene070447.t1;Parent=MS.gene070447.t1 |
| chr3.3 | exon | 25277407 | 25278093 | 25277407 | ID=MS.gene070447.t1.exon2;Parent=MS.gene070447.t1 |
| chr3.3 | CDS | 25277407 | 25278093 | 25277407 | ID=cds.MS.gene070447.t1;Parent=MS.gene070447.t1 |
| Gene Sequence |
| Protein sequence |
