Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07154.t1 | XP_003591588.1 | 98.8 | 495 | 6 | 0 | 1 | 495 | 1 | 495 | 4.50E-292 | 1013.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07154.t1 | Q40153 | 67.4 | 475 | 153 | 1 | 13 | 487 | 1 | 473 | 4.6e-192 | 672.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07154.t1 | G7I2T4 | 98.8 | 495 | 6 | 0 | 1 | 495 | 1 | 495 | 3.3e-292 | 1013.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048313 | MS.gene07154 | PPI |
| MS.gene07154 | MS.gene02160 | PPI |
| MS.gene006974 | MS.gene07154 | PPI |
| MS.gene02843 | MS.gene07154 | PPI |
| MS.gene07154 | MS.gene003186 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07154.t1 | MTR_1g089290 | 98.788 | 495 | 6 | 0 | 1 | 495 | 1 | 495 | 0.0 | 1020 |
| MS.gene07154.t1 | MTR_2g020720 | 69.954 | 436 | 127 | 2 | 49 | 484 | 32 | 463 | 0.0 | 644 |
| MS.gene07154.t1 | MTR_2g020720 | 71.588 | 359 | 98 | 2 | 49 | 407 | 32 | 386 | 0.0 | 536 |
| MS.gene07154.t1 | MTR_7g086360 | 23.297 | 279 | 143 | 7 | 224 | 465 | 96 | 340 | 2.38e-16 | 80.9 |
| MS.gene07154.t1 | MTR_4g119620 | 26.800 | 250 | 164 | 6 | 224 | 464 | 76 | 315 | 1.22e-15 | 78.2 |
| MS.gene07154.t1 | MTR_1g072140 | 25.311 | 241 | 137 | 5 | 224 | 464 | 109 | 306 | 3.15e-15 | 77.0 |
| MS.gene07154.t1 | MTR_6g004040 | 30.667 | 150 | 93 | 3 | 224 | 373 | 57 | 195 | 1.20e-12 | 70.9 |
| MS.gene07154.t1 | MTR_5g022690 | 31.933 | 119 | 77 | 1 | 224 | 342 | 361 | 475 | 5.31e-11 | 65.1 |
| MS.gene07154.t1 | MTR_8g038550 | 23.554 | 242 | 135 | 7 | 229 | 468 | 228 | 421 | 6.92e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07154.t1 | AT4G03020 | 71.753 | 485 | 132 | 3 | 10 | 491 | 10 | 492 | 0.0 | 724 |
| MS.gene07154.t1 | AT4G03020 | 71.753 | 485 | 132 | 3 | 10 | 491 | 10 | 492 | 0.0 | 724 |
| MS.gene07154.t1 | AT4G03020 | 71.753 | 485 | 132 | 3 | 10 | 491 | 10 | 492 | 0.0 | 724 |
| MS.gene07154.t1 | AT2G43770 | 23.843 | 281 | 139 | 6 | 224 | 465 | 94 | 338 | 4.44e-18 | 85.9 |
| MS.gene07154.t1 | AT3G49660 | 24.542 | 273 | 181 | 7 | 208 | 468 | 53 | 312 | 3.97e-15 | 76.6 |
| MS.gene07154.t1 | AT4G02730 | 26.141 | 241 | 125 | 7 | 224 | 459 | 126 | 318 | 7.43e-12 | 67.0 |
| MS.gene07154.t1 | AT1G11160 | 24.696 | 247 | 138 | 7 | 224 | 469 | 56 | 255 | 1.26e-11 | 67.8 |
| MS.gene07154.t1 | AT1G11160 | 24.696 | 247 | 138 | 6 | 224 | 469 | 56 | 255 | 1.27e-11 | 67.8 |
| MS.gene07154.t1 | AT1G11160 | 24.696 | 247 | 138 | 6 | 224 | 469 | 56 | 255 | 1.36e-11 | 67.8 |
| MS.gene07154.t1 | AT1G11160 | 24.696 | 247 | 138 | 6 | 224 | 469 | 14 | 213 | 1.49e-11 | 67.4 |
| MS.gene07154.t1 | AT5G08390 | 29.333 | 150 | 95 | 3 | 224 | 373 | 57 | 195 | 2.24e-11 | 67.0 |
| MS.gene07154.t1 | AT1G61210 | 23.394 | 218 | 135 | 5 | 265 | 468 | 12 | 211 | 5.05e-11 | 65.9 |
| MS.gene07154.t1 | AT1G61210 | 23.394 | 218 | 135 | 5 | 265 | 468 | 12 | 211 | 7.85e-11 | 65.5 |
| MS.gene07154.t1 | AT1G61210 | 23.394 | 218 | 135 | 5 | 265 | 468 | 12 | 211 | 8.05e-11 | 65.5 |
| MS.gene07154.t1 | AT5G23430 | 28.105 | 153 | 93 | 4 | 224 | 373 | 57 | 195 | 9.32e-11 | 65.1 |
| MS.gene07154.t1 | AT5G23430 | 28.105 | 153 | 93 | 4 | 224 | 373 | 57 | 195 | 9.32e-11 | 65.1 |
| MS.gene07154.t1 | AT5G23430 | 28.105 | 153 | 93 | 4 | 224 | 373 | 57 | 195 | 9.41e-11 | 65.1 |
Find 105 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTCTTACAGGTGATTTA+TGG | 0.181919 | 1.4:-71027528 | None:intergenic |
| CTATGCTCGTTAGCTCTTCT+TGG | 0.255220 | 1.4:+71027572 | MS.gene07154:CDS |
| AGCAGATATTTACCTGTAAA+TGG | 0.272385 | 1.4:+71024115 | MS.gene07154:CDS |
| ATATGATCTTGAAACAAATA+AGG | 0.306324 | 1.4:+71024906 | MS.gene07154:CDS |
| TAGCACTGGAAAATCTAAAA+AGG | 0.311940 | 1.4:+71023904 | MS.gene07154:CDS |
| GACGATGGAGGATACTCTTT+TGG | 0.318718 | 1.4:+71024811 | MS.gene07154:CDS |
| CCTTCCCCGTCCTGAACAAT+TGG | 0.339582 | 1.4:-71024062 | None:intergenic |
| AGCATCTTCACCGGGGAAAC+AGG | 0.359807 | 1.4:-71024025 | None:intergenic |
| ACGTATGTCCCAAAGTTTGA+TGG | 0.361310 | 1.4:-71025816 | None:intergenic |
| TGCACTTTACGTTGACCAAA+TGG | 0.380038 | 1.4:+71023811 | MS.gene07154:CDS |
| TGCCAACTACAATCTCTTAC+AGG | 0.382540 | 1.4:-71027538 | None:intergenic |
| TTCCAGTGCTAGAATCTTCA+AGG | 0.382938 | 1.4:-71023892 | None:intergenic |
| ATAGTTATGTACGCTATATC+TGG | 0.384746 | 1.4:+71023788 | None:intergenic |
| CTTACTAGATGGCTTTGATC+AGG | 0.388290 | 1.4:-71024394 | None:intergenic |
| ATCTGCTGGGAGCTCTGATA+TGG | 0.391469 | 1.4:+71027618 | MS.gene07154:CDS |
| GGCCAGAAGTATATCTATAC+TGG | 0.393179 | 1.4:+71026861 | MS.gene07154:CDS |
| ATCCAGTATAGATATACTTC+TGG | 0.402582 | 1.4:-71026863 | None:intergenic |
| ATAGGCCAAGGACCATTTAC+AGG | 0.415805 | 1.4:-71024127 | None:intergenic |
| GGCCGCGAATCCAATTGTTC+AGG | 0.416503 | 1.4:+71024052 | MS.gene07154:CDS |
| CGTATGCTCGACTAGGCATT+TGG | 0.426545 | 1.4:-71024153 | None:intergenic |
| TACTCATAGCATAACCCATT+TGG | 0.431168 | 1.4:-71023826 | None:intergenic |
| AGATCAGACCATCAAACTTT+GGG | 0.433353 | 1.4:+71025808 | MS.gene07154:CDS |
| GGGATGGAGATGTTGTAAAA+TGG | 0.435817 | 1.4:+71027593 | MS.gene07154:CDS |
| AAGATCAGACCATCAAACTT+TGG | 0.439366 | 1.4:+71025807 | MS.gene07154:CDS |
| TATGCTCGTTAGCTCTTCTT+GGG | 0.443104 | 1.4:+71027573 | MS.gene07154:CDS |
| GATGGGAGGGAATTAGTTGC+AGG | 0.457956 | 1.4:+71024859 | MS.gene07154:CDS |
| AATTTCAGTAACCGTGTTCG+TGG | 0.462360 | 1.4:+71026515 | MS.gene07154:intron |
| ATGTGTTTATGTATATGATT+TGG | 0.470295 | 1.4:+71026896 | MS.gene07154:CDS |
| ATCGTACACATTGTAAATGT+TGG | 0.472091 | 1.4:+71024535 | MS.gene07154:CDS |
| ATTTACCTGTAAATGGTCCT+TGG | 0.479935 | 1.4:+71024122 | MS.gene07154:CDS |
| CGGCCTGCCAGCATCTTCAC+CGG | 0.481898 | 1.4:-71024034 | None:intergenic |
| CAGTCAGTGGCTACGTATAG+AGG | 0.482615 | 1.4:+71026614 | MS.gene07154:CDS |
| GCACTTTACGTTGACCAAAT+GGG | 0.482739 | 1.4:+71023812 | MS.gene07154:CDS |
| CGAATCCAATTGTTCAGGAC+GGG | 0.482995 | 1.4:+71024057 | MS.gene07154:CDS |
| ATCCTTGAAGATTCTAGCAC+TGG | 0.486362 | 1.4:+71023890 | MS.gene07154:CDS |
| TCCCCGGTGAAGATGCTGGC+AGG | 0.486810 | 1.4:+71024031 | MS.gene07154:CDS |
| CTCGTTAGCTCTTCTTGGGA+TGG | 0.489305 | 1.4:+71027577 | MS.gene07154:CDS |
| TGAATGGGATTACAGGTGGA+TGG | 0.490487 | 1.4:+71026550 | MS.gene07154:CDS |
| GTCCTGAACAATTGGATTCG+CGG | 0.491213 | 1.4:-71024054 | None:intergenic |
| ACTGGCCATCTTATTTACTC+TGG | 0.494750 | 1.4:+71025324 | MS.gene07154:CDS |
| GAAAGAGTTGCCTGTTTCCC+CGG | 0.495375 | 1.4:+71024015 | MS.gene07154:CDS |
| TATACAATGTGGACAAAGGT+TGG | 0.499477 | 1.4:+71024308 | MS.gene07154:CDS |
| CTGCTAGTACATGATGGGTC+TGG | 0.500073 | 1.4:+71023989 | MS.gene07154:CDS |
| TTACTAGATGGCTTTGATCA+GGG | 0.501289 | 1.4:-71024393 | None:intergenic |
| CTCTGATATGGCAGCCTCGT+CGG | 0.501439 | 1.4:+71027630 | MS.gene07154:CDS |
| GGACGCTATTTCATTTCAAA+CGG | 0.501559 | 1.4:+71025782 | MS.gene07154:CDS |
| CATCAACTGCTAGTACATGA+TGG | 0.505267 | 1.4:+71023983 | MS.gene07154:CDS |
| CAAGAAGAGCTAACGAGCAT+AGG | 0.505730 | 1.4:-71027571 | None:intergenic |
| CACCTGTAAGAGATTGTAGT+TGG | 0.509483 | 1.4:+71027536 | MS.gene07154:CDS |
| TGTCCCATCAAAACCCCTGC+CGG | 0.512728 | 1.4:-71025722 | None:intergenic |
| GTAACCGTGTTCGTGGATAT+AGG | 0.517492 | 1.4:+71026522 | MS.gene07154:intron |
| CCAATTGTTCAGGACGGGGA+AGG | 0.517976 | 1.4:+71024062 | MS.gene07154:CDS |
| TGTTTCCCCGGTGAAGATGC+TGG | 0.519063 | 1.4:+71024027 | MS.gene07154:CDS |
| AATGCTAAAGACAAGCCGGC+AGG | 0.520946 | 1.4:+71025707 | MS.gene07154:CDS |
| TTTATTGATACCCGTGGAGA+TGG | 0.521044 | 1.4:+71025761 | MS.gene07154:CDS |
| TTTAGTGGTCACCTAAAAGC+TGG | 0.522377 | 1.4:-71026677 | None:intergenic |
| CAATAAATGTAATGCCCTCA+AGG | 0.532155 | 1.4:-71025745 | None:intergenic |
| AAGAGCATACCTGGTAACAT+TGG | 0.534358 | 1.4:-71025849 | None:intergenic |
| GTTGTAAAATGGCAATCTGC+TGG | 0.535124 | 1.4:+71027604 | MS.gene07154:CDS |
| TGCTAAAGACAAGCCGGCAG+GGG | 0.535291 | 1.4:+71025709 | MS.gene07154:CDS |
| GACTCTAGTGATACTGAAGA+TGG | 0.540581 | 1.4:+71023860 | MS.gene07154:CDS |
| CAAGAGTGCGTAAGACTGAA+TGG | 0.543044 | 1.4:-71026637 | None:intergenic |
| GATGATTCATTACAGGTGAG+TGG | 0.544157 | 1.4:+71027481 | MS.gene07154:intron |
| CGACTAGGCATTTGGTCGAT+AGG | 0.547791 | 1.4:-71024145 | None:intergenic |
| TACTAGATGGCTTTGATCAG+GGG | 0.548826 | 1.4:-71024392 | None:intergenic |
| GCAGGAGATCCACGATGGGT+TGG | 0.550911 | 1.4:+71024774 | MS.gene07154:intron |
| GGCCTGCCAGCATCTTCACC+GGG | 0.553632 | 1.4:-71024033 | None:intergenic |
| AAGAAGAGCTAACGAGCATA+GGG | 0.554781 | 1.4:-71027570 | None:intergenic |
| ATGCTAAAGACAAGCCGGCA+GGG | 0.560101 | 1.4:+71025708 | MS.gene07154:CDS |
| CACTTCCAGAGTAAATAAGA+TGG | 0.565103 | 1.4:-71025329 | None:intergenic |
| CTTAAATGCTAAAGACAAGC+CGG | 0.577168 | 1.4:+71025703 | MS.gene07154:CDS |
| ACATTTACAATGTGTACGAT+AGG | 0.581114 | 1.4:-71024532 | None:intergenic |
| ATCAACTGCTAGTACATGAT+GGG | 0.581257 | 1.4:+71023984 | MS.gene07154:CDS |
| TTGTAAAATGGCAATCTGCT+GGG | 0.586915 | 1.4:+71027605 | MS.gene07154:CDS |
| GAAATAGCGTCCATCTCCAC+GGG | 0.592069 | 1.4:-71025771 | None:intergenic |
| TGAAATAGCGTCCATCTCCA+CGG | 0.592795 | 1.4:-71025772 | None:intergenic |
| ATGAGGTGTTGATTTCAACT+TGG | 0.593854 | 1.4:-71023963 | None:intergenic |
| AAATGTCATCCAATGTTACC+AGG | 0.595793 | 1.4:+71025840 | MS.gene07154:CDS |
| AAAATATACAATGTGGACAA+AGG | 0.599948 | 1.4:+71024304 | MS.gene07154:CDS |
| AGCCTCGTCGGTTAAGAAGA+GGG | 0.600390 | 1.4:+71027642 | MS.gene07154:CDS |
| CAGCCTCGTCGGTTAAGAAG+AGG | 0.601348 | 1.4:+71027641 | MS.gene07154:CDS |
| GAATTAGTTGCAGGAACTAG+TGG | 0.606878 | 1.4:+71024868 | MS.gene07154:CDS |
| TTCTAACTAAGAGTTTGAGA+TGG | 0.609877 | 1.4:+71024347 | MS.gene07154:CDS |
| CTAACGAGCATAGGGTGGAA+AGG | 0.614104 | 1.4:-71027562 | None:intergenic |
| TAGTACATGATGGGTCTGGA+AGG | 0.615748 | 1.4:+71023993 | MS.gene07154:CDS |
| GCGAATCCAATTGTTCAGGA+CGG | 0.617169 | 1.4:+71024056 | MS.gene07154:CDS |
| TGAGACACGTATGCTCGACT+AGG | 0.624491 | 1.4:-71024160 | None:intergenic |
| AACTCCTATATCCACGAACA+CGG | 0.626589 | 1.4:-71026526 | None:intergenic |
| GGCATTTGGTCGATAGGCCA+AGG | 0.629750 | 1.4:-71024139 | None:intergenic |
| GAATCCAATTGTTCAGGACG+GGG | 0.630776 | 1.4:+71024058 | MS.gene07154:CDS |
| AGTTTCATCAGCAAAACATA+CGG | 0.631088 | 1.4:-71025304 | None:intergenic |
| GTGTACGATAGGTGACATGC+TGG | 0.632627 | 1.4:-71024521 | None:intergenic |
| TGCTATGAGTAGATTAGACG+TGG | 0.632706 | 1.4:+71023838 | MS.gene07154:CDS |
| AAGAGCTAACGAGCATAGGG+TGG | 0.635204 | 1.4:-71027567 | None:intergenic |
| TCATGTACTAGCAGTTGATG+AGG | 0.637096 | 1.4:-71023980 | None:intergenic |
| ATTACATTTATTGATACCCG+TGG | 0.637357 | 1.4:+71025755 | MS.gene07154:CDS |
| CAAAAGATGACAGCGATCAG+CGG | 0.644029 | 1.4:-71024092 | None:intergenic |
| AAGTGATGATAGTTTCTGCA+AGG | 0.652431 | 1.4:+71025347 | MS.gene07154:CDS |
| AATATGCAGGAGATCCACGA+TGG | 0.665955 | 1.4:+71024769 | MS.gene07154:intron |
| TCATCCTTGTGATCAGTCAG+TGG | 0.674274 | 1.4:+71026601 | MS.gene07154:CDS |
| GTAGCCACTGACTGATCACA+AGG | 0.680555 | 1.4:-71026605 | None:intergenic |
| ATATGCAGGAGATCCACGAT+GGG | 0.686383 | 1.4:+71024770 | MS.gene07154:intron |
| AGAGTCACTAGCAAATGTGA+CGG | 0.704087 | 1.4:+71024570 | MS.gene07154:CDS |
| TACCCTCTTCTTAACCGACG+AGG | 0.713771 | 1.4:-71027644 | None:intergenic |
| GCCTGCCAGCATCTTCACCG+GGG | 0.715871 | 1.4:-71024032 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATTATAAAACTTG+AGG | - | chr1.4:71027037-71027056 | None:intergenic | 10.0% |
| !! | AAATAAATTATAAAACTTGA+GGG | - | chr1.4:71027036-71027055 | None:intergenic | 10.0% |
| !! | AAGAAAAATAATTGATTAAA+AGG | - | chr1.4:71024445-71024464 | None:intergenic | 10.0% |
| !!! | CTAAATTAATTTATTTTTCA+GGG | + | chr1.4:71024271-71024290 | MS.gene07154:intron | 10.0% |
| !!! | TCTAAATTAATTTATTTTTC+AGG | + | chr1.4:71024270-71024289 | MS.gene07154:intron | 10.0% |
| !! | AAATAGTATAATCTATAACT+AGG | + | chr1.4:71026978-71026997 | MS.gene07154:intron | 15.0% |
| !! | AATAAATTATAAAACTTGAG+GGG | - | chr1.4:71027035-71027054 | None:intergenic | 15.0% |
| !! | AATAGTATAATCTATAACTA+GGG | + | chr1.4:71026979-71026998 | MS.gene07154:intron | 15.0% |
| !! | TTGATAAATTATTCAATCAT+TGG | - | chr1.4:71027089-71027108 | None:intergenic | 15.0% |
| !!! | AAAAGATGAAATTTAAGATT+TGG | + | chr1.4:71027143-71027162 | MS.gene07154:intron | 15.0% |
| !!! | AGATTTTATGTTTTTATCAT+CGG | + | chr1.4:71026944-71026963 | MS.gene07154:intron | 15.0% |
| !!! | TGTAATGTATTATTTTTAAG+CGG | + | chr1.4:71027383-71027402 | MS.gene07154:intron | 15.0% |
| !! | AATTATGTTGTAAAATTGTG+AGG | + | chr1.4:71026209-71026228 | MS.gene07154:intron | 20.0% |
| !! | ACTGAAATTTAGAGAAAAAT+CGG | - | chr1.4:71026504-71026523 | None:intergenic | 20.0% |
| !! | ATAGTATAATCTATAACTAG+GGG | + | chr1.4:71026980-71026999 | MS.gene07154:intron | 20.0% |
| !! | ATATGATCTTGAAACAAATA+AGG | + | chr1.4:71024906-71024925 | MS.gene07154:CDS | 20.0% |
| !! | ATGTGTTTATGTATATGATT+TGG | + | chr1.4:71026896-71026915 | MS.gene07154:CDS | 20.0% |
| !! | CTTGAGCATATTAAAATTAT+TGG | + | chr1.4:71026781-71026800 | MS.gene07154:intron | 20.0% |
| !! | GTAAAATGAAAACCAAAATT+TGG | - | chr1.4:71025265-71025284 | None:intergenic | 20.0% |
| !! | TAAATTAGACGACTTATATT+AGG | + | chr1.4:71026094-71026113 | MS.gene07154:intron | 20.0% |
| !! | TAAATTATAGATTCAGACAA+TGG | - | chr1.4:71025010-71025029 | None:intergenic | 20.0% |
| !! | TCTAATGTACAAAATTGTTT+AGG | + | chr1.4:71025664-71025683 | MS.gene07154:intron | 20.0% |
| !! | TTCATATAATTCAACAGATA+TGG | - | chr1.4:71025890-71025909 | None:intergenic | 20.0% |
| !! | TTGTCTGAATCTATAATTTA+TGG | + | chr1.4:71025010-71025029 | MS.gene07154:intron | 20.0% |
| !!! | AAACTCTGTATTTTTCATTT+TGG | - | chr1.4:71026293-71026312 | None:intergenic | 20.0% |
| !!! | AAATCATTTTCATATTGTGA+TGG | + | chr1.4:71025198-71025217 | MS.gene07154:intron | 20.0% |
| ! | AAAACTATAGATGCATACAT+AGG | - | chr1.4:71024247-71024266 | None:intergenic | 25.0% |
| ! | AAAATATACAATGTGGACAA+AGG | + | chr1.4:71024304-71024323 | MS.gene07154:CDS | 25.0% |
| ! | AAACTATAGATGCATACATA+GGG | - | chr1.4:71024246-71024265 | None:intergenic | 25.0% |
| ! | AATTTGAAGAAAACAACATC+AGG | - | chr1.4:71026832-71026851 | None:intergenic | 25.0% |
| ! | CAGAAAGTTTATATTGTAGT+TGG | + | chr1.4:71025597-71025616 | MS.gene07154:intron | 25.0% |
| ! | CCACATAAAAATATACAATG+TGG | + | chr1.4:71024297-71024316 | MS.gene07154:CDS | 25.0% |
| ! | GAAAATGAAGAATGATGAAA+AGG | - | chr1.4:71026712-71026731 | None:intergenic | 25.0% |
| ! | GAGATACTGCTTATAAAATT+CGG | - | chr1.4:71027352-71027371 | None:intergenic | 25.0% |
| ! | GTATACTTGTGAATTATCTA+TGG | + | chr1.4:71026236-71026255 | MS.gene07154:intron | 25.0% |
| ! | GTCCAAATATGAAAATCAAA+GGG | - | chr1.4:71026747-71026766 | None:intergenic | 25.0% |
| ! | TAGTATAATCTATAACTAGG+GGG | + | chr1.4:71026981-71027000 | MS.gene07154:intron | 25.0% |
| ! | TCCAAATATGAAAATCAAAG+GGG | - | chr1.4:71026746-71026765 | None:intergenic | 25.0% |
| ! | TCTATGTGAAATCAAAAGTT+GGG | - | chr1.4:71025442-71025461 | None:intergenic | 25.0% |
| ! | TGTCCAAATATGAAAATCAA+AGG | - | chr1.4:71026748-71026767 | None:intergenic | 25.0% |
| ! | TTCTATGTGAAATCAAAAGT+TGG | - | chr1.4:71025443-71025462 | None:intergenic | 25.0% |
| ! | TTTCAGTTCTTATAATATGC+AGG | + | chr1.4:71024756-71024775 | MS.gene07154:intron | 25.0% |
| !! | AAACTTTGATGATTCATTAC+AGG | + | chr1.4:71027474-71027493 | MS.gene07154:intron | 25.0% |
| !! | AAAGTATTTACACATACCAT+AGG | + | chr1.4:71025235-71025254 | MS.gene07154:intron | 25.0% |
| !! | AACTGTCATAGTTTTTCTTA+TGG | + | chr1.4:71024469-71024488 | MS.gene07154:intron | 25.0% |
| !! | ATATAGAATTAGCTTAGTCT+CGG | - | chr1.4:71026449-71026468 | None:intergenic | 25.0% |
| !! | ATGAAATTTAAGATTTGGAG+TGG | + | chr1.4:71027148-71027167 | MS.gene07154:intron | 25.0% |
| !! | CTAATATTTTCATGCAGAAA+TGG | - | chr1.4:71027113-71027132 | None:intergenic | 25.0% |
| !! | CTATTTAGCTTCATATGATT+TGG | + | chr1.4:71024983-71025002 | MS.gene07154:intron | 25.0% |
| !!! | CAAGGCATTGTATTTTTATT+GGG | - | chr1.4:71027445-71027464 | None:intergenic | 25.0% |
| !!! | CCACATTGTATATTTTTATG+TGG | - | chr1.4:71024300-71024319 | None:intergenic | 25.0% |
| AATCTCTTACAGGTGATTTA+TGG | - | chr1.4:71027531-71027550 | None:intergenic | 30.0% | |
| AATTTATGGTGCAGTTTGAA+GGG | + | chr1.4:71025024-71025043 | MS.gene07154:intron | 30.0% | |
| ACATTTACAATGTGTACGAT+AGG | - | chr1.4:71024535-71024554 | None:intergenic | 30.0% | |
| ACCAAAATTTGGAAAACCTA+TGG | - | chr1.4:71025254-71025273 | None:intergenic | 30.0% | |
| ACTCTAAATTTCCATGAACA+AGG | - | chr1.4:71026035-71026054 | None:intergenic | 30.0% | |
| AGCAGATATTTACCTGTAAA+TGG | + | chr1.4:71024115-71024134 | MS.gene07154:CDS | 30.0% | |
| AGGTATGTTCTACAATAAGA+TGG | + | chr1.4:71025367-71025386 | MS.gene07154:intron | 30.0% | |
| AGTAAAATACACCTTGTTCA+TGG | + | chr1.4:71026021-71026040 | MS.gene07154:intron | 30.0% | |
| AGTTTCATCAGCAAAACATA+CGG | - | chr1.4:71025307-71025326 | None:intergenic | 30.0% | |
| ATCCAGTATAGATATACTTC+TGG | - | chr1.4:71026866-71026885 | None:intergenic | 30.0% | |
| ATCGTACACATTGTAAATGT+TGG | + | chr1.4:71024535-71024554 | MS.gene07154:CDS | 30.0% | |
| ATCTCATACTTATATCGTCA+AGG | + | chr1.4:71025492-71025511 | MS.gene07154:intron | 30.0% | |
| ATGAAAAGAACACCATCAAA+CGG | - | chr1.4:71024723-71024742 | None:intergenic | 30.0% | |
| ATTACATTTATTGATACCCG+TGG | + | chr1.4:71025755-71025774 | MS.gene07154:CDS | 30.0% | |
| CATTTGCATTCTTCAATTTC+AGG | + | chr1.4:71024492-71024511 | MS.gene07154:intron | 30.0% | |
| CCAAAGATCATAATTCAATG+TGG | - | chr1.4:71024599-71024618 | None:intergenic | 30.0% | |
| CCACATTGAATTATGATCTT+TGG | + | chr1.4:71024596-71024615 | MS.gene07154:intron | 30.0% | |
| CTAATGCATAATAGAGATAC+AGG | + | chr1.4:71026158-71026177 | MS.gene07154:intron | 30.0% | |
| GTACAAAATTGTTTAGGTCT+GGG | + | chr1.4:71025670-71025689 | MS.gene07154:intron | 30.0% | |
| TAAAATTCGGTTATGAACAG+CGG | - | chr1.4:71027339-71027358 | None:intergenic | 30.0% | |
| TAATTTATGGTGCAGTTTGA+AGG | + | chr1.4:71025023-71025042 | MS.gene07154:intron | 30.0% | |
| TCAAAGTTTCTTATTGAGCA+AGG | - | chr1.4:71027463-71027482 | None:intergenic | 30.0% | |
| TCAGAGGAATAGATACAAAT+TGG | + | chr1.4:71024658-71024677 | MS.gene07154:intron | 30.0% | |
| TGAAGAATGATGAAAAGGTA+AGG | - | chr1.4:71026707-71026726 | None:intergenic | 30.0% | |
| TGGGAAAGATAAAATTCATG+TGG | + | chr1.4:71025966-71025985 | MS.gene07154:intron | 30.0% | |
| TGTACAAAATTGTTTAGGTC+TGG | + | chr1.4:71025669-71025688 | MS.gene07154:intron | 30.0% | |
| TTCTAACTAAGAGTTTGAGA+TGG | + | chr1.4:71024347-71024366 | MS.gene07154:CDS | 30.0% | |
| TTTCTTCAAATTTACAGCAC+TGG | + | chr1.4:71026840-71026859 | MS.gene07154:intron | 30.0% | |
| ! | ACCATAGGTTTTCCAAATTT+TGG | + | chr1.4:71025250-71025269 | MS.gene07154:intron | 30.0% |
| ! | CTGTGAAATTTTCAACAGAT+GGG | + | chr1.4:71024842-71024861 | MS.gene07154:CDS | 30.0% |
| ! | GATTTTTCATCAAATGACGA+TGG | + | chr1.4:71024796-71024815 | MS.gene07154:CDS | 30.0% |
| ! | TAGCACTGGAAAATCTAAAA+AGG | + | chr1.4:71023904-71023923 | MS.gene07154:CDS | 30.0% |
| ! | TCTGTGAAATTTTCAACAGA+TGG | + | chr1.4:71024841-71024860 | MS.gene07154:CDS | 30.0% |
| !! | AACTCTAGTTAACTTGTATC+TGG | + | chr1.4:71026069-71026088 | MS.gene07154:intron | 30.0% |
| !! | TAGTAGTTTGCTGATTGTTT+AGG | - | chr1.4:71027220-71027239 | None:intergenic | 30.0% |
| !! | TCCCCTTTGATTTTCATATT+TGG | + | chr1.4:71026742-71026761 | MS.gene07154:intron | 30.0% |
| !! | TTTAGGCATTTTGCTATGTT+CGG | - | chr1.4:71027203-71027222 | None:intergenic | 30.0% |
| !!! | GAGTATTAGAGTTTTGTTCA+TGG | + | chr1.4:71027285-71027304 | MS.gene07154:intron | 30.0% |
| !!! | GCAAGGCATTGTATTTTTAT+TGG | - | chr1.4:71027446-71027465 | None:intergenic | 30.0% |
| !!! | TGGATATAGGAGTTTTGAAT+GGG | + | chr1.4:71026535-71026554 | MS.gene07154:CDS | 30.0% |
| !!! | TTTTCTAAGATGTCTGTAAC+TGG | + | chr1.4:71024682-71024701 | MS.gene07154:intron | 30.0% |
| AAAGCCATCTAGTAAGTAAC+TGG | + | chr1.4:71024401-71024420 | MS.gene07154:intron | 35.0% | |
| AAATGTCATCCAATGTTACC+AGG | + | chr1.4:71025840-71025859 | MS.gene07154:CDS | 35.0% | |
| AAGATCAGACCATCAAACTT+TGG | + | chr1.4:71025807-71025826 | MS.gene07154:CDS | 35.0% | |
| AAGTGATGATAGTTTCTGCA+AGG | + | chr1.4:71025347-71025366 | MS.gene07154:CDS | 35.0% | |
| ACCTTATAGAAATGTGTGCT+CGG | - | chr1.4:71026189-71026208 | None:intergenic | 35.0% | |
| AGATCAGACCATCAAACTTT+GGG | + | chr1.4:71025808-71025827 | MS.gene07154:CDS | 35.0% | |
| AGATTGAACTCCTGTGTAAA+AGG | - | chr1.4:71025476-71025495 | None:intergenic | 35.0% | |
| ATCAACTGCTAGTACATGAT+GGG | + | chr1.4:71023984-71024003 | MS.gene07154:CDS | 35.0% | |
| ATTTACCTGTAAATGGTCCT+TGG | + | chr1.4:71024122-71024141 | MS.gene07154:CDS | 35.0% | |
| ATTTATGGTGCAGTTTGAAG+GGG | + | chr1.4:71025025-71025044 | MS.gene07154:intron | 35.0% | |
| CAAAAGTTGGGATACTCAAA+AGG | - | chr1.4:71025430-71025449 | None:intergenic | 35.0% | |
| CAACAGATATGGATACCAAA+AGG | - | chr1.4:71025879-71025898 | None:intergenic | 35.0% | |
| CAATAAATGTAATGCCCTCA+AGG | - | chr1.4:71025748-71025767 | None:intergenic | 35.0% | |
| CACTTCCAGAGTAAATAAGA+TGG | - | chr1.4:71025332-71025351 | None:intergenic | 35.0% | |
| CTTAAATGCTAAAGACAAGC+CGG | + | chr1.4:71025703-71025722 | MS.gene07154:CDS | 35.0% | |
| GACACTGTCAATAGATTAAG+TGG | - | chr1.4:71025109-71025128 | None:intergenic | 35.0% | |
| GTTTCCAGTTACTTACTAGA+TGG | - | chr1.4:71024408-71024427 | None:intergenic | 35.0% | |
| TAAAAGTGAGAATGCTTACC+TGG | - | chr1.4:71024222-71024241 | None:intergenic | 35.0% | |
| TACTCATAGCATAACCCATT+TGG | - | chr1.4:71023829-71023848 | None:intergenic | 35.0% | |
| TATACAATGTGGACAAAGGT+TGG | + | chr1.4:71024308-71024327 | MS.gene07154:CDS | 35.0% | |
| TATGATTGTTCGCAATGCAA+AGG | + | chr1.4:71026466-71026485 | MS.gene07154:intron | 35.0% | |
| TTGTAAAATGGCAATCTGCT+GGG | + | chr1.4:71027605-71027624 | MS.gene07154:CDS | 35.0% | |
| ! | AGTTTGCTTAGCTGCATAAT+AGG | + | chr1.4:71025076-71025095 | MS.gene07154:intron | 35.0% |
| ! | CATATTGTGATGGCTCTATA+TGG | + | chr1.4:71025208-71025227 | MS.gene07154:intron | 35.0% |
| ! | GAAATTTTCAACAGATGGGA+GGG | + | chr1.4:71024846-71024865 | MS.gene07154:CDS | 35.0% |
| ! | GGACGCTATTTCATTTCAAA+CGG | + | chr1.4:71025782-71025801 | MS.gene07154:CDS | 35.0% |
| ! | GTAATGAACACCTTTTACAC+AGG | + | chr1.4:71025463-71025482 | MS.gene07154:intron | 35.0% |
| ! | GTATGTTTTGCTGATGAAAC+TGG | + | chr1.4:71025306-71025325 | MS.gene07154:CDS | 35.0% |
| ! | TGAAATTTTCAACAGATGGG+AGG | + | chr1.4:71024845-71024864 | MS.gene07154:CDS | 35.0% |
| ! | TGATTCAAGTCTTTTGCTTG+TGG | - | chr1.4:71026584-71026603 | None:intergenic | 35.0% |
| ! | TTTTCATCAAATGACGATGG+AGG | + | chr1.4:71024799-71024818 | MS.gene07154:CDS | 35.0% |
| !! | ATGAGGTGTTGATTTCAACT+TGG | - | chr1.4:71023966-71023985 | None:intergenic | 35.0% |
| !! | GTTTTGAATGCTATGATCAG+AGG | + | chr1.4:71024642-71024661 | MS.gene07154:intron | 35.0% |
| !! | TTACTAGATGGCTTTGATCA+GGG | - | chr1.4:71024396-71024415 | None:intergenic | 35.0% |
| !! | TTGGTTTTCATTTTACGTGC+AGG | + | chr1.4:71025269-71025288 | MS.gene07154:intron | 35.0% |
| !!! | ATGGTTCACTTTTTGTTGCT+GGG | + | chr1.4:71024194-71024213 | MS.gene07154:CDS | 35.0% |
| !!! | GTGGATATAGGAGTTTTGAA+TGG | + | chr1.4:71026534-71026553 | MS.gene07154:CDS | 35.0% |
| AAAAGGTAAGGCCAGTTTAG+TGG | - | chr1.4:71026695-71026714 | None:intergenic | 40.0% | |
| AACCATAAGTCTGTGACTGA+TGG | + | chr1.4:71026120-71026139 | MS.gene07154:intron | 40.0% | |
| AACTCCTATATCCACGAACA+CGG | - | chr1.4:71026529-71026548 | None:intergenic | 40.0% | |
| AAGAAGAGCTAACGAGCATA+GGG | - | chr1.4:71027573-71027592 | None:intergenic | 40.0% | |
| AAGTTGGGATACTCAAAAGG+AGG | - | chr1.4:71025427-71025446 | None:intergenic | 40.0% | |
| AATCTATAACTAGGGGGAAG+AGG | + | chr1.4:71026987-71027006 | MS.gene07154:intron | 40.0% | |
| AATTTCAGTAACCGTGTTCG+TGG | + | chr1.4:71026515-71026534 | MS.gene07154:intron | 40.0% | |
| ACCATAAGTCTGTGACTGAT+GGG | + | chr1.4:71026121-71026140 | MS.gene07154:intron | 40.0% | |
| ACGTATGTCCCAAAGTTTGA+TGG | - | chr1.4:71025819-71025838 | None:intergenic | 40.0% | |
| AGAGTCACTAGCAAATGTGA+CGG | + | chr1.4:71024570-71024589 | MS.gene07154:CDS | 40.0% | |
| AGGAACAGACAACATTAGCT+AGG | - | chr1.4:71026424-71026443 | None:intergenic | 40.0% | |
| AGTTGGGATACTCAAAAGGA+GGG | - | chr1.4:71025426-71025445 | None:intergenic | 40.0% | |
| ATCCTTGAAGATTCTAGCAC+TGG | + | chr1.4:71023890-71023909 | MS.gene07154:CDS | 40.0% | |
| ATCTATAACTAGGGGGAAGA+GGG | + | chr1.4:71026988-71027007 | MS.gene07154:intron | 40.0% | |
| ATGAAAAATCCAACCCATCG+TGG | - | chr1.4:71024786-71024805 | None:intergenic | 40.0% | |
| ATGTACAAGGTTCCGTTTGA+TGG | + | chr1.4:71024708-71024727 | MS.gene07154:intron | 40.0% | |
| CACCTGTAAGAGATTGTAGT+TGG | + | chr1.4:71027536-71027555 | MS.gene07154:CDS | 40.0% | |
| CATCAACTGCTAGTACATGA+TGG | + | chr1.4:71023983-71024002 | MS.gene07154:CDS | 40.0% | |
| CTGTAACTGGTGTATGTACA+AGG | + | chr1.4:71024695-71024714 | MS.gene07154:intron | 40.0% | |
| GAATTAGTTGCAGGAACTAG+TGG | + | chr1.4:71024868-71024887 | MS.gene07154:CDS | 40.0% | |
| GACACAGAATCATCGTTGAT+TGG | - | chr1.4:71026361-71026380 | None:intergenic | 40.0% | |
| GACTCTAGTGATACTGAAGA+TGG | + | chr1.4:71023860-71023879 | MS.gene07154:CDS | 40.0% | |
| GATGATTCATTACAGGTGAG+TGG | + | chr1.4:71027481-71027500 | MS.gene07154:intron | 40.0% | |
| GCACTTTACGTTGACCAAAT+GGG | + | chr1.4:71023812-71023831 | MS.gene07154:CDS | 40.0% | |
| GGGATGGAGATGTTGTAAAA+TGG | + | chr1.4:71027593-71027612 | MS.gene07154:CDS | 40.0% | |
| GTTGTAAAATGGCAATCTGC+TGG | + | chr1.4:71027604-71027623 | MS.gene07154:CDS | 40.0% | |
| TCCGAGCACACATTTCTATA+AGG | + | chr1.4:71026185-71026204 | MS.gene07154:intron | 40.0% | |
| TCTCCTTGAACTTTGATTCC+TGG | + | chr1.4:71027308-71027327 | MS.gene07154:intron | 40.0% | |
| TGCACTTTACGTTGACCAAA+TGG | + | chr1.4:71023811-71023830 | MS.gene07154:CDS | 40.0% | |
| TGCCAACTACAATCTCTTAC+AGG | - | chr1.4:71027541-71027560 | None:intergenic | 40.0% | |
| TGCTATGAGTAGATTAGACG+TGG | + | chr1.4:71023838-71023857 | MS.gene07154:CDS | 40.0% | |
| TTCCAGTGCTAGAATCTTCA+AGG | - | chr1.4:71023895-71023914 | None:intergenic | 40.0% | |
| TTTAGTGGTCACCTAAAAGC+TGG | - | chr1.4:71026680-71026699 | None:intergenic | 40.0% | |
| TTTATGGTGCAGTTTGAAGG+GGG | + | chr1.4:71025026-71025045 | MS.gene07154:intron | 40.0% | |
| TTTATTGATACCCGTGGAGA+TGG | + | chr1.4:71025761-71025780 | MS.gene07154:CDS | 40.0% | |
| ! | AAAGGCTAAAAGAGCATACC+TGG | - | chr1.4:71025861-71025880 | None:intergenic | 40.0% |
| ! | AAGAGCATACCTGGTAACAT+TGG | - | chr1.4:71025852-71025871 | None:intergenic | 40.0% |
| ! | ACTGGCCATCTTATTTACTC+TGG | + | chr1.4:71025324-71025343 | MS.gene07154:CDS | 40.0% |
| ! | GAATTAGCTTAGTCTCGGAT+AGG | - | chr1.4:71026444-71026463 | None:intergenic | 40.0% |
| ! | GGCCAGAAGTATATCTATAC+TGG | + | chr1.4:71026861-71026880 | MS.gene07154:CDS | 40.0% |
| ! | TATGCTCGTTAGCTCTTCTT+GGG | + | chr1.4:71027573-71027592 | MS.gene07154:CDS | 40.0% |
| ! | TCATGTACTAGCAGTTGATG+AGG | - | chr1.4:71023983-71024002 | None:intergenic | 40.0% |
| ! | TTCAAGTCTTTTGCTTGTGG+CGG | - | chr1.4:71026581-71026600 | None:intergenic | 40.0% |
| !! | ACTTCGAATTTTAGCGCACA+CGG | + | chr1.4:71024933-71024952 | MS.gene07154:CDS | 40.0% |
| !! | CTTACTAGATGGCTTTGATC+AGG | - | chr1.4:71024397-71024416 | None:intergenic | 40.0% |
| !! | CTTTTAGGTGACCACTAAAC+TGG | + | chr1.4:71026681-71026700 | MS.gene07154:intron | 40.0% |
| !! | GCTTTTTCTCTCCAGCTTTT+AGG | + | chr1.4:71026666-71026685 | MS.gene07154:CDS | 40.0% |
| !! | GGTATGCTCTTTTAGCCTTT+TGG | + | chr1.4:71025861-71025880 | MS.gene07154:intron | 40.0% |
| !! | GTTGTTTTGTTCTTTCCCTC+TGG | + | chr1.4:71025621-71025640 | MS.gene07154:intron | 40.0% |
| !! | GTTTTGAATGGGATTACAGG+TGG | + | chr1.4:71026546-71026565 | MS.gene07154:CDS | 40.0% |
| !! | TACTAGATGGCTTTGATCAG+GGG | - | chr1.4:71024395-71024414 | None:intergenic | 40.0% |
| !!! | GATGGTTCACTTTTTGTTGC+TGG | + | chr1.4:71024193-71024212 | MS.gene07154:CDS | 40.0% |
| !!! | GGAGTTTTGAATGGGATTAC+AGG | + | chr1.4:71026543-71026562 | MS.gene07154:CDS | 40.0% |
| AAGCTGGAGAGAAAAAGCAG+CGG | - | chr1.4:71026664-71026683 | None:intergenic | 45.0% | |
| AATATGCAGGAGATCCACGA+TGG | + | chr1.4:71024769-71024788 | MS.gene07154:intron | 45.0% | |
| ACCCATCAGTCACAGACTTA+TGG | - | chr1.4:71026125-71026144 | None:intergenic | 45.0% | |
| AGGCCAGGAATCAAAGTTCA+AGG | - | chr1.4:71027314-71027333 | None:intergenic | 45.0% | |
| ATAGGCCAAGGACCATTTAC+AGG | - | chr1.4:71024130-71024149 | None:intergenic | 45.0% | |
| ATATGCAGGAGATCCACGAT+GGG | + | chr1.4:71024770-71024789 | MS.gene07154:intron | 45.0% | |
| CAAAAGATGACAGCGATCAG+CGG | - | chr1.4:71024095-71024114 | None:intergenic | 45.0% | |
| CAAGAAGAGCTAACGAGCAT+AGG | - | chr1.4:71027574-71027593 | None:intergenic | 45.0% | |
| CGAATCCAATTGTTCAGGAC+GGG | + | chr1.4:71024057-71024076 | MS.gene07154:CDS | 45.0% | |
| GAATCCAATTGTTCAGGACG+GGG | + | chr1.4:71024058-71024077 | MS.gene07154:CDS | 45.0% | |
| GCGAATCCAATTGTTCAGGA+CGG | + | chr1.4:71024056-71024075 | MS.gene07154:CDS | 45.0% | |
| GTAACCGTGTTCGTGGATAT+AGG | + | chr1.4:71026522-71026541 | MS.gene07154:intron | 45.0% | |
| GTCCTGAACAATTGGATTCG+CGG | - | chr1.4:71024057-71024076 | None:intergenic | 45.0% | |
| TCATCCTTGTGATCAGTCAG+TGG | + | chr1.4:71026601-71026620 | MS.gene07154:CDS | 45.0% | |
| TGAAATAGCGTCCATCTCCA+CGG | - | chr1.4:71025775-71025794 | None:intergenic | 45.0% | |
| TGAATGGGATTACAGGTGGA+TGG | + | chr1.4:71026550-71026569 | MS.gene07154:CDS | 45.0% | |
| TTTGTGTCAGCTTGTCTGTC+TGG | + | chr1.4:71026383-71026402 | MS.gene07154:intron | 45.0% | |
| ! | AAGTCTGTGACTGATGGGTA+TGG | + | chr1.4:71026126-71026145 | MS.gene07154:intron | 45.0% |
| ! | ACTTTTTGTTGCTGGGTTCC+AGG | + | chr1.4:71024201-71024220 | MS.gene07154:CDS | 45.0% |
| ! | CAAGAGTGCGTAAGACTGAA+TGG | - | chr1.4:71026640-71026659 | None:intergenic | 45.0% |
| ! | CTATGCTCGTTAGCTCTTCT+TGG | + | chr1.4:71027572-71027591 | MS.gene07154:CDS | 45.0% |
| ! | GACGATGGAGGATACTCTTT+TGG | + | chr1.4:71024811-71024830 | MS.gene07154:CDS | 45.0% |
| ! | GTGTCTCAGTTTTCAGCTGA+TGG | + | chr1.4:71024175-71024194 | MS.gene07154:CDS | 45.0% |
| ! | TCAAGTCTTTTGCTTGTGGC+GGG | - | chr1.4:71026580-71026599 | None:intergenic | 45.0% |
| !! | GTTTTGATGGGACACCTTGA+GGG | + | chr1.4:71025731-71025750 | MS.gene07154:CDS | 45.0% |
| !! | TAGTACATGATGGGTCTGGA+AGG | + | chr1.4:71023993-71024012 | MS.gene07154:CDS | 45.0% |
| !!! | TAATTTATTTATCATTTTTA+TGG | + | chr1.4:71025173-71025192 | MS.gene07154:intron | 5.0% |
| AAGAGCTAACGAGCATAGGG+TGG | - | chr1.4:71027570-71027589 | None:intergenic | 50.0% | |
| AATGCTAAAGACAAGCCGGC+AGG | + | chr1.4:71025707-71025726 | MS.gene07154:CDS | 50.0% | |
| ATGCTAAAGACAAGCCGGCA+GGG | + | chr1.4:71025708-71025727 | MS.gene07154:CDS | 50.0% | |
| CAGTCAGTGGCTACGTATAG+AGG | + | chr1.4:71026614-71026633 | MS.gene07154:CDS | 50.0% | |
| CGACTAGGCATTTGGTCGAT+AGG | - | chr1.4:71024148-71024167 | None:intergenic | 50.0% | |
| CGTATGCTCGACTAGGCATT+TGG | - | chr1.4:71024156-71024175 | None:intergenic | 50.0% | |
| CTAACGAGCATAGGGTGGAA+AGG | - | chr1.4:71027565-71027584 | None:intergenic | 50.0% | |
| GAAAGAGTTGCCTGTTTCCC+CGG | + | chr1.4:71024015-71024034 | MS.gene07154:CDS | 50.0% | |
| GAAATAGCGTCCATCTCCAC+GGG | - | chr1.4:71025774-71025793 | None:intergenic | 50.0% | |
| GATGGGAGGGAATTAGTTGC+AGG | + | chr1.4:71024859-71024878 | MS.gene07154:CDS | 50.0% | |
| GTGTACGATAGGTGACATGC+TGG | - | chr1.4:71024524-71024543 | None:intergenic | 50.0% | |
| GTTCTTTCCCTCTGGACTTC+AGG | + | chr1.4:71025629-71025648 | MS.gene07154:intron | 50.0% | |
| TACCCTCTTCTTAACCGACG+AGG | - | chr1.4:71027647-71027666 | None:intergenic | 50.0% | |
| TATAACTAGGGGGAAGAGGG+AGG | + | chr1.4:71026991-71027010 | MS.gene07154:intron | 50.0% | |
| TCCCTAACCTGAAGTCCAGA+GGG | - | chr1.4:71025639-71025658 | None:intergenic | 50.0% | |
| TGAGACACGTATGCTCGACT+AGG | - | chr1.4:71024163-71024182 | None:intergenic | 50.0% | |
| ! | AGCCTCGTCGGTTAAGAAGA+GGG | + | chr1.4:71027642-71027661 | MS.gene07154:CDS | 50.0% |
| ! | ATCTGCTGGGAGCTCTGATA+TGG | + | chr1.4:71027618-71027637 | MS.gene07154:CDS | 50.0% |
| ! | CTCGTTAGCTCTTCTTGGGA+TGG | + | chr1.4:71027577-71027596 | MS.gene07154:CDS | 50.0% |
| ! | GCTAGAGCACTTCTGCTGAT+GGG | + | chr1.4:71025947-71025966 | MS.gene07154:intron | 50.0% |
| ! | GTAGCCACTGACTGATCACA+AGG | - | chr1.4:71026608-71026627 | None:intergenic | 50.0% |
| ! | TCCCTCTGGACTTCAGGTTA+GGG | + | chr1.4:71025635-71025654 | MS.gene07154:intron | 50.0% |
| ! | TGCTAGAGCACTTCTGCTGA+TGG | + | chr1.4:71025946-71025965 | MS.gene07154:intron | 50.0% |
| ! | TTCCCTCTGGACTTCAGGTT+AGG | + | chr1.4:71025634-71025653 | MS.gene07154:intron | 50.0% |
| !! | CTGCTAGTACATGATGGGTC+TGG | + | chr1.4:71023989-71024008 | MS.gene07154:CDS | 50.0% |
| !! | GGTTTTGATGGGACACCTTG+AGG | + | chr1.4:71025730-71025749 | MS.gene07154:CDS | 50.0% |
| AGCATCTTCACCGGGGAAAC+AGG | - | chr1.4:71024028-71024047 | None:intergenic | 55.0% | |
| ATGGTGCAGTTTGAAGGGGG+TGG | + | chr1.4:71025029-71025048 | MS.gene07154:intron | 55.0% | |
| CCAATTGTTCAGGACGGGGA+AGG | + | chr1.4:71024062-71024081 | MS.gene07154:CDS | 55.0% | |
| CCTTCCCCGTCCTGAACAAT+TGG | - | chr1.4:71024065-71024084 | None:intergenic | 55.0% | |
| CTCTGATATGGCAGCCTCGT+CGG | + | chr1.4:71027630-71027649 | MS.gene07154:CDS | 55.0% | |
| GGCATTTGGTCGATAGGCCA+AGG | - | chr1.4:71024142-71024161 | None:intergenic | 55.0% | |
| GGCCGCGAATCCAATTGTTC+AGG | + | chr1.4:71024052-71024071 | MS.gene07154:CDS | 55.0% | |
| GTCCCTAACCTGAAGTCCAG+AGG | - | chr1.4:71025640-71025659 | None:intergenic | 55.0% | |
| TGCTAAAGACAAGCCGGCAG+GGG | + | chr1.4:71025709-71025728 | MS.gene07154:CDS | 55.0% | |
| TGTCCCATCAAAACCCCTGC+CGG | - | chr1.4:71025725-71025744 | None:intergenic | 55.0% | |
| TGTTTCCCCGGTGAAGATGC+TGG | + | chr1.4:71024027-71024046 | MS.gene07154:CDS | 55.0% | |
| TTCGGTTATGAACAGCGGCG+AGG | - | chr1.4:71027334-71027353 | None:intergenic | 55.0% | |
| ! | CAGCCTCGTCGGTTAAGAAG+AGG | + | chr1.4:71027641-71027660 | MS.gene07154:CDS | 55.0% |
| !! | AAGCCGGCAGGGGTTTTGAT+GGG | + | chr1.4:71025719-71025738 | MS.gene07154:CDS | 55.0% |
| CTAGGGGGAAGAGGGAGGAT+AGG | + | chr1.4:71026996-71027015 | MS.gene07154:intron | 60.0% | |
| GCAGGAGATCCACGATGGGT+TGG | + | chr1.4:71024774-71024793 | MS.gene07154:intron | 60.0% | |
| TTATGAACAGCGGCGAGGCC+AGG | - | chr1.4:71027329-71027348 | None:intergenic | 60.0% | |
| !! | CAAGCCGGCAGGGGTTTTGA+TGG | + | chr1.4:71025718-71025737 | MS.gene07154:CDS | 60.0% |
| CGGCCTGCCAGCATCTTCAC+CGG | - | chr1.4:71024037-71024056 | None:intergenic | 65.0% | |
| GCCTGCCAGCATCTTCACCG+GGG | - | chr1.4:71024035-71024054 | None:intergenic | 65.0% | |
| GGCCTGCCAGCATCTTCACC+GGG | - | chr1.4:71024036-71024055 | None:intergenic | 65.0% | |
| TCCCCGGTGAAGATGCTGGC+AGG | + | chr1.4:71024031-71024050 | MS.gene07154:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 71023794 | 71027699 | 71023794 | ID=MS.gene07154 |
| chr1.4 | mRNA | 71023794 | 71027699 | 71023794 | ID=MS.gene07154.t1;Parent=MS.gene07154 |
| chr1.4 | exon | 71023794 | 71024222 | 71023794 | ID=MS.gene07154.t1.exon1;Parent=MS.gene07154.t1 |
| chr1.4 | CDS | 71023794 | 71024222 | 71023794 | ID=cds.MS.gene07154.t1;Parent=MS.gene07154.t1 |
| chr1.4 | exon | 71024292 | 71024411 | 71024292 | ID=MS.gene07154.t1.exon2;Parent=MS.gene07154.t1 |
| chr1.4 | CDS | 71024292 | 71024411 | 71024292 | ID=cds.MS.gene07154.t1;Parent=MS.gene07154.t1 |
| chr1.4 | exon | 71024514 | 71024591 | 71024514 | ID=MS.gene07154.t1.exon3;Parent=MS.gene07154.t1 |
| chr1.4 | CDS | 71024514 | 71024591 | 71024514 | ID=cds.MS.gene07154.t1;Parent=MS.gene07154.t1 |
| chr1.4 | exon | 71024778 | 71024954 | 71024778 | ID=MS.gene07154.t1.exon4;Parent=MS.gene07154.t1 |
| chr1.4 | CDS | 71024778 | 71024954 | 71024778 | ID=cds.MS.gene07154.t1;Parent=MS.gene07154.t1 |
| chr1.4 | exon | 71025291 | 71025368 | 71025291 | ID=MS.gene07154.t1.exon5;Parent=MS.gene07154.t1 |
| chr1.4 | CDS | 71025291 | 71025368 | 71025291 | ID=cds.MS.gene07154.t1;Parent=MS.gene07154.t1 |
| chr1.4 | exon | 71025686 | 71025861 | 71025686 | ID=MS.gene07154.t1.exon6;Parent=MS.gene07154.t1 |
| chr1.4 | CDS | 71025686 | 71025861 | 71025686 | ID=cds.MS.gene07154.t1;Parent=MS.gene07154.t1 |
| chr1.4 | exon | 71026523 | 71026687 | 71026523 | ID=MS.gene07154.t1.exon7;Parent=MS.gene07154.t1 |
| chr1.4 | CDS | 71026523 | 71026687 | 71026523 | ID=cds.MS.gene07154.t1;Parent=MS.gene07154.t1 |
| chr1.4 | exon | 71026857 | 71026917 | 71026857 | ID=MS.gene07154.t1.exon8;Parent=MS.gene07154.t1 |
| chr1.4 | CDS | 71026857 | 71026917 | 71026857 | ID=cds.MS.gene07154.t1;Parent=MS.gene07154.t1 |
| chr1.4 | exon | 71027496 | 71027699 | 71027496 | ID=MS.gene07154.t1.exon9;Parent=MS.gene07154.t1 |
| chr1.4 | CDS | 71027496 | 71027699 | 71027496 | ID=cds.MS.gene07154.t1;Parent=MS.gene07154.t1 |
| Gene Sequence |
| Protein sequence |
