Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071694.t1 | XP_024629590.1 | 81.2 | 441 | 29 | 5 | 1 | 432 | 20 | 415 | 6.30E-181 | 643.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071694.t1 | B3H6K1 | 50.3 | 384 | 150 | 7 | 58 | 432 | 33 | 384 | 4.0e-91 | 336.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071694.t1 | A0A396GMP9 | 81.2 | 441 | 29 | 5 | 1 | 432 | 20 | 415 | 4.5e-181 | 643.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053998 | MS.gene071694 | 0.811 | 8.71E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene071694 | 0.803343 | 3.65E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 81 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTCCTCCACAATATTC+TGG | 0.212408 | 8.4:-45185194 | MS.gene071694:CDS |
| TCTAGTCCACTTATCTTCTT+AGG | 0.221259 | 8.4:-45186446 | MS.gene071694:CDS |
| TAGGAGAGCCCAATTCTATT+AGG | 0.238637 | 8.4:-45187915 | MS.gene071694:CDS |
| TCAGTCTTCGCATATCTTCT+AGG | 0.254603 | 8.4:+45187733 | None:intergenic |
| GGAGGTTCATCATCTGATTT+AGG | 0.273758 | 8.4:-45187934 | MS.gene071694:CDS |
| GGGTTCTATCAATCCTGTTC+TGG | 0.276290 | 8.4:-45184738 | MS.gene071694:intron |
| ATAGGAAACTATCTTCTCTT+TGG | 0.285512 | 8.4:-45184811 | MS.gene071694:CDS |
| TATTGGGGTATGTACCTTAT+TGG | 0.285585 | 8.4:-45184841 | MS.gene071694:CDS |
| AATATATGCCCTAATAGAAT+TGG | 0.292716 | 8.4:+45187906 | None:intergenic |
| CACAACTGGTGTGGATTATC+AGG | 0.297835 | 8.4:-45186404 | MS.gene071694:CDS |
| CTTACTTGCTACATTTCTTC+TGG | 0.301512 | 8.4:-45183585 | None:intergenic |
| TAAGGGACTAACCAGTTTAT+TGG | 0.304785 | 8.4:+45188995 | None:intergenic |
| GATGGTTTCGGATGAGAGTT+TGG | 0.311577 | 8.4:-45184759 | MS.gene071694:CDS |
| TTCGTTCTTGTTACCACAAC+TGG | 0.312922 | 8.4:-45186418 | MS.gene071694:CDS |
| AGGAGAGCCCAATTCTATTA+GGG | 0.330535 | 8.4:-45187914 | MS.gene071694:CDS |
| TAGCAAATTCATTAGTTTCT+CGG | 0.331569 | 8.4:-45186869 | MS.gene071694:CDS |
| TTTCCTCAAATAGGTGCATT+TGG | 0.334118 | 8.4:-45185285 | MS.gene071694:intron |
| ACACTGGCTGATCTTATTCC+TGG | 0.353610 | 8.4:-45183647 | MS.gene071694:CDS |
| TGAAACATACGGAGCTAGTT+TGG | 0.359742 | 8.4:-45187713 | MS.gene071694:intron |
| TCACCTCCATTCCAATAAAC+TGG | 0.359980 | 8.4:-45189006 | MS.gene071694:CDS |
| TACCTTATTGGTGTTCATAT+AGG | 0.360036 | 8.4:-45184829 | MS.gene071694:CDS |
| TATTAACTGTGCTTCTAGAT+AGG | 0.364217 | 8.4:-45184623 | MS.gene071694:CDS |
| TACTTTATATTGCAGTTAAG+AGG | 0.380012 | 8.4:-45188076 | MS.gene071694:intron |
| TTCCTATATGAACACCAATA+AGG | 0.395906 | 8.4:+45184827 | None:intergenic |
| GCTCGAAATCGTGGCTCTTA+CGG | 0.400279 | 8.4:-45189148 | MS.gene071694:CDS |
| TTAAGAGTAGCAGATGGTTT+CGG | 0.405090 | 8.4:-45184771 | MS.gene071694:CDS |
| ACATTCCTCCACAATATTCT+GGG | 0.424084 | 8.4:-45185193 | MS.gene071694:CDS |
| TCTGCATTGCAGATGGATCT+TGG | 0.424668 | 8.4:-45186909 | MS.gene071694:intron |
| TTGTGGAGGAATGTTAATAA+AGG | 0.434111 | 8.4:+45185202 | None:intergenic |
| GGGCATATATTACTTCGTAC+AGG | 0.435581 | 8.4:-45187894 | MS.gene071694:CDS |
| CAACCTGCCATATGTTACTA+TGG | 0.437729 | 8.4:-45184480 | MS.gene071694:CDS |
| TACTTGAAGAAGCACTTAAT+CGG | 0.438633 | 8.4:-45183610 | MS.gene071694:CDS |
| ATGGTTTCGGATGAGAGTTT+GGG | 0.449590 | 8.4:-45184758 | MS.gene071694:CDS |
| GGTGTTGGCTGACAATCTAC+AGG | 0.453830 | 8.4:-45184459 | MS.gene071694:CDS |
| GATTTCGAGCAACGAGGAAC+CGG | 0.463370 | 8.4:+45189161 | None:intergenic |
| TTTGGATCACTTGTCCTAGT+AGG | 0.466783 | 8.4:-45185167 | MS.gene071694:intron |
| GAATGTTAATAAAGGATGTA+AGG | 0.470683 | 8.4:+45185210 | None:intergenic |
| TAGGTGCATTTGGCTGAATA+TGG | 0.485287 | 8.4:-45185275 | MS.gene071694:CDS |
| ATATATGCCCTAATAGAATT+GGG | 0.488888 | 8.4:+45187907 | None:intergenic |
| TTGCAGATGGATCTTGGTGT+TGG | 0.496261 | 8.4:-45186903 | MS.gene071694:intron |
| TATTTGCTTTCAAATGAAAG+AGG | 0.498192 | 8.4:-45185032 | MS.gene071694:CDS |
| GCCATATGTTACTATGGTGT+TGG | 0.500642 | 8.4:-45184474 | MS.gene071694:CDS |
| TATCAGTTCTGTTTGATGCA+TGG | 0.505786 | 8.4:-45185065 | MS.gene071694:CDS |
| CGTACAGGGTTATTGTGGTA+TGG | 0.508458 | 8.4:-45187879 | MS.gene071694:CDS |
| GCCAACACCATAGTAACATA+TGG | 0.508652 | 8.4:+45184473 | None:intergenic |
| TACTTCGTACAGGGTTATTG+TGG | 0.518290 | 8.4:-45187884 | MS.gene071694:CDS |
| GACTAACCAGTTTATTGGAA+TGG | 0.518718 | 8.4:+45189000 | None:intergenic |
| TATAACAGTCTTGTGCATCT+TGG | 0.518830 | 8.4:-45187776 | MS.gene071694:CDS |
| AATCTATAGTCAATGTTGCT+AGG | 0.519749 | 8.4:+45188379 | None:intergenic |
| AAATCAGATGATGAACCTCC+AGG | 0.534740 | 8.4:+45187937 | None:intergenic |
| TCTTGTTACCACAACTGGTG+TGG | 0.539175 | 8.4:-45186413 | MS.gene071694:CDS |
| GGAAAGAATTTCACGGAGAA+CGG | 0.541407 | 8.4:-45184595 | MS.gene071694:intron |
| CTGATAATCCACACCAGTTG+TGG | 0.545791 | 8.4:+45186405 | None:intergenic |
| GCTATTGTCAATTCTAACAC+TGG | 0.558501 | 8.4:-45183663 | MS.gene071694:CDS |
| TTGAAACTCCTATGCTCAGA+AGG | 0.559544 | 8.4:+45188408 | None:intergenic |
| ATCATAAGTCAAAACAAGGA+GGG | 0.571213 | 8.4:-45185002 | MS.gene071694:CDS |
| AGATTCGTTAGCAATTTGAC+CGG | 0.577515 | 8.4:-45189180 | MS.gene071694:CDS |
| TGGCTGAATATGGTGTGCAT+TGG | 0.577955 | 8.4:-45185265 | MS.gene071694:CDS |
| TTCCTCGTTGCTCGAAATCG+TGG | 0.578520 | 8.4:-45189157 | MS.gene071694:CDS |
| TACTCTTAAATGCAGTGGAA+TGG | 0.579015 | 8.4:+45184785 | None:intergenic |
| TCATAAGTCAAAACAAGGAG+GGG | 0.581030 | 8.4:-45185001 | MS.gene071694:CDS |
| GGCATATATTACTTCGTACA+GGG | 0.586471 | 8.4:-45187893 | MS.gene071694:CDS |
| CATTCCTCCACAATATTCTG+GGG | 0.586568 | 8.4:-45185192 | MS.gene071694:CDS |
| AACTGGTGTGGATTATCAGG+TGG | 0.588654 | 8.4:-45186401 | MS.gene071694:CDS |
| GCTTTCAAATGAAAGAGGAA+CGG | 0.589771 | 8.4:-45185027 | MS.gene071694:CDS |
| TAACCAGTTTATTGGAATGG+AGG | 0.596633 | 8.4:+45189003 | None:intergenic |
| ACGATGCACCTTCTGAGCAT+AGG | 0.602064 | 8.4:-45188416 | MS.gene071694:CDS |
| TCTGCTACTCTTAAATGCAG+TGG | 0.603067 | 8.4:+45184780 | None:intergenic |
| TGTGCTTCTAGATAGGCTTG+TGG | 0.603365 | 8.4:-45184616 | MS.gene071694:CDS |
| CTGCATTTAAGAGTAGCAGA+TGG | 0.606022 | 8.4:-45184777 | MS.gene071694:CDS |
| ACACCATAGTAACATATGGC+AGG | 0.607655 | 8.4:+45184477 | None:intergenic |
| GGCTTGTGGAAAGAATTTCA+CGG | 0.622479 | 8.4:-45184602 | MS.gene071694:CDS |
| TATCATAAGTCAAAACAAGG+AGG | 0.634877 | 8.4:-45185003 | MS.gene071694:CDS |
| TATGCGAAGACTGAAACATA+CGG | 0.640229 | 8.4:-45187724 | MS.gene071694:CDS |
| ACTGGTGTGGATTATCAGGT+GGG | 0.642852 | 8.4:-45186400 | MS.gene071694:CDS |
| GGATATCATAAGTCAAAACA+AGG | 0.662347 | 8.4:-45185006 | MS.gene071694:CDS |
| ACACTTAACTGCAGGCCTGG+AGG | 0.671758 | 8.4:-45187952 | MS.gene071694:intron |
| AAAACCCCAGAATATTGTGG+AGG | 0.674098 | 8.4:+45185188 | None:intergenic |
| GTGTTGGCTGACAATCTACA+GGG | 0.689612 | 8.4:-45184458 | MS.gene071694:CDS |
| TGATCCAATGAACAGAACAG+AGG | 0.753287 | 8.4:+45184420 | None:intergenic |
| AGCCACGATTTCGAGCAACG+AGG | 0.761276 | 8.4:+45189155 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAACCT+AGG | + | chr8.4:45186557-45186576 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAACCTA+GGG | + | chr8.4:45186556-45186575 | None:intergenic | 10.0% |
| !! | AAAAAAATATGTAAATCTTA+CGG | + | chr8.4:45186891-45186910 | None:intergenic | 10.0% |
| !! | TAAAAATTTAAAAAACACAT+AGG | + | chr8.4:45186489-45186508 | None:intergenic | 10.0% |
| !!! | AAAGTATTTTTAAAAGTTAA+GGG | - | chr8.4:45185289-45185308 | MS.gene071694:intron | 10.0% |
| !!! | TAAAGTATTTTTAAAAGTTA+AGG | - | chr8.4:45185288-45185307 | MS.gene071694:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTGTTGT+GGG | - | chr8.4:45184513-45184532 | MS.gene071694:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGTTG+TGG | - | chr8.4:45184512-45184531 | MS.gene071694:intron | 10.0% |
| !! | AAAAAAAAAAAAAAACCTAG+GGG | + | chr8.4:45186555-45186574 | None:intergenic | 15.0% |
| !! | ATGTAACATATAAAATTGTT+TGG | - | chr8.4:45187329-45187348 | MS.gene071694:intron | 15.0% |
| !! | TAAAATACATTAATGAAAGA+AGG | + | chr8.4:45185183-45185202 | None:intergenic | 15.0% |
| !! | TGAAAAGAAAAACATATTAT+TGG | + | chr8.4:45187399-45187418 | None:intergenic | 15.0% |
| !! | TGTAACATATAAAATTGTTT+GGG | - | chr8.4:45187330-45187349 | MS.gene071694:intron | 15.0% |
| !!! | AAGTATTTTTAAAAGTTAAG+GGG | - | chr8.4:45185290-45185309 | MS.gene071694:intron | 15.0% |
| !!! | ATAAATCATTAGTTTTCTAA+AGG | - | chr8.4:45186051-45186070 | MS.gene071694:intron | 15.0% |
| !!! | ATGACAAAAAATAGTTTTAA+AGG | - | chr8.4:45185261-45185280 | MS.gene071694:CDS | 15.0% |
| !!! | ATTTTTTTATGTGATCATTA+TGG | - | chr8.4:45184181-45184200 | MS.gene071694:intron | 15.0% |
| !!! | TTCATTAATGTATTTTAAGT+TGG | - | chr8.4:45185186-45185205 | MS.gene071694:CDS | 15.0% |
| !!! | TTTTTATTTAAGCTATAAGT+TGG | + | chr8.4:45183985-45184004 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTGTTGTG+GGG | - | chr8.4:45184514-45184533 | MS.gene071694:intron | 15.0% |
| !! | AAATTTCATCTTGATTGTAT+TGG | - | chr8.4:45186611-45186630 | MS.gene071694:intron | 20.0% |
| !! | AAATTTGAATCAATGATTGA+AGG | - | chr8.4:45187675-45187694 | MS.gene071694:intron | 20.0% |
| !! | AATTTCATCTTGATTGTATT+GGG | - | chr8.4:45186612-45186631 | MS.gene071694:intron | 20.0% |
| !! | AATTTGAATCAATGATTGAA+GGG | - | chr8.4:45187676-45187695 | MS.gene071694:intron | 20.0% |
| !! | ACATTATAGATATTAGAGTT+TGG | - | chr8.4:45187106-45187125 | MS.gene071694:intron | 20.0% |
| !! | ATGACTTGAACTAATTAATT+AGG | + | chr8.4:45187365-45187384 | None:intergenic | 20.0% |
| !! | CTAATTAAAGCAAATTCTTT+GGG | - | chr8.4:45185425-45185444 | MS.gene071694:intron | 20.0% |
| !! | GATTACATTATATATCTACT+AGG | - | chr8.4:45186800-45186819 | MS.gene071694:intron | 20.0% |
| !! | TAAAGTTAATGTAGAGAAAA+AGG | - | chr8.4:45185628-45185647 | MS.gene071694:intron | 20.0% |
| !! | TAATTAAAGCAAATTCTTTG+GGG | - | chr8.4:45185426-45185445 | MS.gene071694:intron | 20.0% |
| !! | TCAAAAGGATAAATAAGTTA+GGG | + | chr8.4:45188069-45188088 | None:intergenic | 20.0% |
| !! | TTCAAAAGGATAAATAAGTT+AGG | + | chr8.4:45188070-45188089 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTCATTGATAAAC+AGG | + | chr8.4:45185253-45185272 | None:intergenic | 20.0% |
| !!! | GATTTTGCAATTGAAATTAT+GGG | - | chr8.4:45187031-45187050 | MS.gene071694:intron | 20.0% |
| !!! | TACACTTAATTTTTATCAGT+AGG | + | chr8.4:45188628-45188647 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTTATTCAGATTT+TGG | - | chr8.4:45183717-45183736 | MS.gene071694:intron | 20.0% |
| !!! | TGATTTTGCAATTGAAATTA+TGG | - | chr8.4:45187030-45187049 | MS.gene071694:intron | 20.0% |
| ! | AAAAAAAATTGAAGAAGCAG+GGG | + | chr8.4:45185395-45185414 | None:intergenic | 25.0% |
| ! | AAAAATCCTAAGAAGATAAG+TGG | + | chr8.4:45186327-45186346 | None:intergenic | 25.0% |
| ! | AATATATGCCCTAATAGAAT+TGG | + | chr8.4:45184861-45184880 | None:intergenic | 25.0% |
| ! | AATGAAGGCTATTTAATGTT+AGG | - | chr8.4:45188870-45188889 | MS.gene071694:intron | 25.0% |
| ! | AATGACAAAGTAAAAAGAGT+TGG | + | chr8.4:45184132-45184151 | None:intergenic | 25.0% |
| ! | AATTAAAGCAAATTCTTTGG+GGG | - | chr8.4:45185427-45185446 | MS.gene071694:intron | 25.0% |
| ! | ACAAAAAAAATTGAAGAAGC+AGG | + | chr8.4:45185397-45185416 | None:intergenic | 25.0% |
| ! | ATATATGCCCTAATAGAATT+GGG | + | chr8.4:45184860-45184879 | None:intergenic | 25.0% |
| ! | ATCAGAATCTATAAAACAGT+TGG | + | chr8.4:45185752-45185771 | None:intergenic | 25.0% |
| ! | ATCAGTGTTTAATATTGTGA+TGG | - | chr8.4:45188363-45188382 | MS.gene071694:intron | 25.0% |
| ! | ATTCAAGTATTTAATCCGAA+TGG | - | chr8.4:45189065-45189084 | MS.gene071694:intron | 25.0% |
| ! | CAAAAAAAATTGAAGAAGCA+GGG | + | chr8.4:45185396-45185415 | None:intergenic | 25.0% |
| ! | CAAAAAAATTAGTACTAACG+AGG | + | chr8.4:45184456-45184475 | None:intergenic | 25.0% |
| ! | CAAATTAGCAATTACAATGT+TGG | + | chr8.4:45189026-45189045 | None:intergenic | 25.0% |
| ! | CCTAATTAAAGCAAATTCTT+TGG | - | chr8.4:45185424-45185443 | MS.gene071694:intron | 25.0% |
| ! | CTCTAATATCTATAATGTGT+CGG | + | chr8.4:45187104-45187123 | None:intergenic | 25.0% |
| ! | GAATGTTAATAAAGGATGTA+AGG | + | chr8.4:45187557-45187576 | None:intergenic | 25.0% |
| ! | GTTAAATAAGATGCAGTATT+AGG | + | chr8.4:45186449-45186468 | None:intergenic | 25.0% |
| ! | TAATGTAGAGAAAAAGGAAT+GGG | - | chr8.4:45185634-45185653 | MS.gene071694:intron | 25.0% |
| ! | TACATTGAAAATGAATGCAT+AGG | + | chr8.4:45185535-45185554 | None:intergenic | 25.0% |
| ! | TACTTTATATTGCAGTTAAG+AGG | - | chr8.4:45184688-45184707 | MS.gene071694:intron | 25.0% |
| ! | TAGCTTAAATAAAAACAGTC+TGG | - | chr8.4:45183990-45184009 | MS.gene071694:intron | 25.0% |
| ! | TATAATTGCTACAATGAACT+TGG | - | chr8.4:45184607-45184626 | MS.gene071694:CDS | 25.0% |
| ! | TATTTGCTTTCAAATGAAAG+AGG | - | chr8.4:45187732-45187751 | MS.gene071694:CDS | 25.0% |
| ! | TCATTATGGTTTGAATATTC+TGG | - | chr8.4:45184195-45184214 | MS.gene071694:intron | 25.0% |
| ! | TGAAGTGATAAATAATACAG+TGG | + | chr8.4:45185594-45185613 | None:intergenic | 25.0% |
| ! | TGGAAATATAAATGATATCC+AGG | - | chr8.4:45185206-45185225 | MS.gene071694:CDS | 25.0% |
| ! | TGTAACACCAGATAAAAATA+AGG | + | chr8.4:45184016-45184035 | None:intergenic | 25.0% |
| ! | TTAAGCTGTTTATCCAAATA+CGG | - | chr8.4:45184084-45184103 | MS.gene071694:intron | 25.0% |
| ! | TTAATGTAGAGAAAAAGGAA+TGG | - | chr8.4:45185633-45185652 | MS.gene071694:intron | 25.0% |
| !! | AAAAACAGATTTAGGTTAAG+GGG | + | chr8.4:45186977-45186996 | None:intergenic | 25.0% |
| !! | AAGAATTTGCTTTAATTAGG+AGG | + | chr8.4:45185424-45185443 | None:intergenic | 25.0% |
| !! | ACAAAAACAGATTTAGGTTA+AGG | + | chr8.4:45186979-45186998 | None:intergenic | 25.0% |
| !! | CAAAAACAGATTTAGGTTAA+GGG | + | chr8.4:45186978-45186997 | None:intergenic | 25.0% |
| !! | CCAAAGAATTTGCTTTAATT+AGG | + | chr8.4:45185427-45185446 | None:intergenic | 25.0% |
| !! | GCATTCATTTTCAATGTATT+TGG | - | chr8.4:45185537-45185556 | MS.gene071694:intron | 25.0% |
| !! | TAGCAAATTCATTAGTTTCT+CGG | - | chr8.4:45185895-45185914 | MS.gene071694:intron | 25.0% |
| !! | TTTTTACAAGCTCATACAAT+AGG | - | chr8.4:45186098-45186117 | MS.gene071694:intron | 25.0% |
| !!! | AACTTTTGAAGTAGTTTTGA+GGG | - | chr8.4:45185150-45185169 | MS.gene071694:intron | 25.0% |
| !!! | AAGAAAAAAAAGTACCTACT+AGG | + | chr8.4:45187614-45187633 | None:intergenic | 25.0% |
| !!! | AATGTATTTGGTTTTGACTT+AGG | - | chr8.4:45185549-45185568 | MS.gene071694:intron | 25.0% |
| !!! | ATGTATTTGGTTTTGACTTA+GGG | - | chr8.4:45185550-45185569 | MS.gene071694:intron | 25.0% |
| !!! | ATTAGTTAGTTTTCATCCAT+TGG | + | chr8.4:45188244-45188263 | None:intergenic | 25.0% |
| !!! | ATTAGTTCAAGTCATTTTCA+AGG | - | chr8.4:45187370-45187389 | MS.gene071694:intron | 25.0% |
| !!! | ATTTTTAAAAGTTAAGGGGT+GGG | - | chr8.4:45185294-45185313 | MS.gene071694:intron | 25.0% |
| !!! | CATTGTTTGATTTGAAAACT+TGG | - | chr8.4:45188912-45188931 | MS.gene071694:intron | 25.0% |
| !!! | GATTTTTAGCATATTTGGTA+AGG | - | chr8.4:45187785-45187804 | MS.gene071694:CDS | 25.0% |
| !!! | GCTAATTTGACATTTGATTT+TGG | - | chr8.4:45189037-45189056 | MS.gene071694:intron | 25.0% |
| !!! | GTAATTGTTTTTCCTCAAAT+AGG | - | chr8.4:45187470-45187489 | MS.gene071694:intron | 25.0% |
| !!! | TAACTTTTGAAGTAGTTTTG+AGG | - | chr8.4:45185149-45185168 | MS.gene071694:intron | 25.0% |
| !!! | TATATTGTAGTTGTCACTTT+AGG | - | chr8.4:45188395-45188414 | MS.gene071694:CDS | 25.0% |
| !!! | TATTTTATCTGACTTGTGAA+GGG | - | chr8.4:45185491-45185510 | MS.gene071694:intron | 25.0% |
| !!! | TATTTTTAAAAGTTAAGGGG+TGG | - | chr8.4:45185293-45185312 | MS.gene071694:intron | 25.0% |
| !!! | TTATTTTATCTGACTTGTGA+AGG | - | chr8.4:45185490-45185509 | MS.gene071694:intron | 25.0% |
| AACAATGCATTTCTACATCT+AGG | + | chr8.4:45186020-45186039 | None:intergenic | 30.0% | |
| AAGTTCGAACCAAGAAATTT+GGG | + | chr8.4:45185330-45185349 | None:intergenic | 30.0% | |
| AATCTATAGTCAATGTTGCT+AGG | + | chr8.4:45184388-45184407 | None:intergenic | 30.0% | |
| AGATATTTGTGGAGATAAAG+TGG | - | chr8.4:45188687-45188706 | MS.gene071694:intron | 30.0% | |
| ATAGGAAACTATCTTCTCTT+TGG | - | chr8.4:45187953-45187972 | MS.gene071694:intron | 30.0% | |
| ATATTCCATGAGAAATTACC+TGG | + | chr8.4:45185227-45185246 | None:intergenic | 30.0% | |
| ATCATAAGTCAAAACAAGGA+GGG | - | chr8.4:45187762-45187781 | MS.gene071694:CDS | 30.0% | |
| ATGAATGCATAGGTTAAAAG+AGG | + | chr8.4:45185525-45185544 | None:intergenic | 30.0% | |
| ATTCTCATTGTAATTCTGCT+TGG | - | chr8.4:45184149-45184168 | MS.gene071694:intron | 30.0% | |
| ATTTCTTATATCGTTGTTGC+TGG | - | chr8.4:45188783-45188802 | MS.gene071694:intron | 30.0% | |
| CATTATTAACATGAACATGC+TGG | - | chr8.4:45186129-45186148 | MS.gene071694:intron | 30.0% | |
| CTCTATTAAGAACTAGTACT+AGG | + | chr8.4:45186664-45186683 | None:intergenic | 30.0% | |
| GAACACACAAAAACAGATTT+AGG | + | chr8.4:45186985-45187004 | None:intergenic | 30.0% | |
| GATTCAGAAAAGATGACATA+AGG | + | chr8.4:45187643-45187662 | None:intergenic | 30.0% | |
| GCACAAAAAGATCAAAACAA+TGG | + | chr8.4:45184935-45184954 | None:intergenic | 30.0% | |
| GGATATCATAAGTCAAAACA+AGG | - | chr8.4:45187758-45187777 | MS.gene071694:CDS | 30.0% | |
| GTAGTTATTGAGAAATCCAT+AGG | + | chr8.4:45188963-45188982 | None:intergenic | 30.0% | |
| GTTATAGTTTCTTACTCGAA+GGG | - | chr8.4:45188205-45188224 | MS.gene071694:intron | 30.0% | |
| TAAAGAACTGATGTTATCAC+AGG | + | chr8.4:45186263-45186282 | None:intergenic | 30.0% | |
| TAAGTTCGAACCAAGAAATT+TGG | + | chr8.4:45185331-45185350 | None:intergenic | 30.0% | |
| TAATTAATAATCTGACCCCT+AGG | - | chr8.4:45186537-45186556 | MS.gene071694:intron | 30.0% | |
| TATCATAAGTCAAAACAAGG+AGG | - | chr8.4:45187761-45187780 | MS.gene071694:CDS | 30.0% | |
| TATTAACTGTGCTTCTAGAT+AGG | - | chr8.4:45188141-45188160 | MS.gene071694:intron | 30.0% | |
| TCAAATCAAACAATGACTTG+TGG | + | chr8.4:45188833-45188814 | None:intergenic | 30.0% | |
| TCGAGTAAGAAACTATAACA+TGG | + | chr8.4:45188204-45188223 | None:intergenic | 30.0% | |
| TCTACATGTAGAGATATGAT+TGG | + | chr8.4:45188670-45188689 | None:intergenic | 30.0% | |
| TCTCTACATGTAGATATTTG+TGG | - | chr8.4:45188676-45188695 | MS.gene071694:intron | 30.0% | |
| TCTTTACTTGCTTCAGAAAA+TGG | - | chr8.4:45186277-45186296 | MS.gene071694:intron | 30.0% | |
| TGCAATTGAAATTATGGGTT+TGG | - | chr8.4:45187036-45187055 | MS.gene071694:intron | 30.0% | |
| TGCTAACAATAGCAAATGTT+GGG | - | chr8.4:45184474-45184493 | MS.gene071694:CDS | 30.0% | |
| TGTAATTCTGCTTGGATAAT+GGG | - | chr8.4:45184157-45184176 | MS.gene071694:intron | 30.0% | |
| TGTTATAGTTTCTTACTCGA+AGG | - | chr8.4:45188204-45188223 | MS.gene071694:intron | 30.0% | |
| TTAGAGGGGTAAAATCAAAA+TGG | - | chr8.4:45186939-45186958 | MS.gene071694:intron | 30.0% | |
| TTCCTATATGAACACCAATA+AGG | + | chr8.4:45187940-45187959 | None:intergenic | 30.0% | |
| TTCTGTAGACTTCATTCAAA+AGG | + | chr8.4:45188084-45188103 | None:intergenic | 30.0% | |
| TTGCTAACAATAGCAAATGT+TGG | - | chr8.4:45184473-45184492 | MS.gene071694:CDS | 30.0% | |
| TTGGTCTAAGTTTAATCCTA+TGG | - | chr8.4:45188944-45188963 | MS.gene071694:intron | 30.0% | |
| TTGTAATTCTGCTTGGATAA+TGG | - | chr8.4:45184156-45184175 | MS.gene071694:intron | 30.0% | |
| TTGTGGAGGAATGTTAATAA+AGG | + | chr8.4:45187565-45187584 | None:intergenic | 30.0% | |
| ! | ACAGTGAAAAATAAGAGCAT+AGG | + | chr8.4:45184427-45184446 | None:intergenic | 30.0% |
| ! | ATAACTGAGAATTGACTTAC+AGG | + | chr8.4:45183650-45183669 | None:intergenic | 30.0% |
| ! | CAGAAATTGATTCTCAATGA+AGG | - | chr8.4:45188855-45188874 | MS.gene071694:intron | 30.0% |
| ! | CTATATTAGCTTAGACATTG+AGG | - | chr8.4:45186690-45186709 | MS.gene071694:intron | 30.0% |
| ! | GTTTTTGTGTGTTCTTGTAA+AGG | - | chr8.4:45186991-45187010 | MS.gene071694:intron | 30.0% |
| ! | TAACTGAGAATTGACTTACA+GGG | + | chr8.4:45183649-45183668 | None:intergenic | 30.0% |
| ! | TACCTTATTGGTGTTCATAT+AGG | - | chr8.4:45187935-45187954 | MS.gene071694:CDS | 30.0% |
| ! | TCTAATTCACGATTTTCTCA+AGG | - | chr8.4:45187441-45187460 | MS.gene071694:intron | 30.0% |
| ! | TGCATTTTACTTCTGATACA+TGG | - | chr8.4:45187856-45187875 | MS.gene071694:intron | 30.0% |
| ! | TTTTTACACTGTCAAGTGAT+TGG | - | chr8.4:45188554-45188573 | MS.gene071694:intron | 30.0% |
| !! | TACTTGAAGAAGCACTTAAT+CGG | - | chr8.4:45189154-45189173 | MS.gene071694:CDS | 30.0% |
| !! | TTTTTAAAAGTTAAGGGGTG+GGG | - | chr8.4:45185295-45185314 | MS.gene071694:intron | 30.0% |
| !!! | ATCGTCATTTTTCTTCTTCA+GGG | + | chr8.4:45184333-45184352 | None:intergenic | 30.0% |
| !!! | TCACTTTAGGATTCTTTTGT+TGG | - | chr8.4:45188408-45188427 | MS.gene071694:CDS | 30.0% |
| !!! | TGTATTTGGTTTTGACTTAG+GGG | - | chr8.4:45185551-45185570 | MS.gene071694:intron | 30.0% |
| !!! | TTTTTTTTTTTGTTGTGGGG+CGG | - | chr8.4:45184517-45184536 | MS.gene071694:intron | 30.0% |
| AACATTCCTCCACAATATTC+TGG | - | chr8.4:45187570-45187589 | MS.gene071694:intron | 35.0% | |
| AAGTAATCCTGGAGAGATTA+AGG | + | chr8.4:45183956-45183975 | None:intergenic | 35.0% | |
| AATTACTTCTGCATTGCAGA+TGG | - | chr8.4:45185848-45185867 | MS.gene071694:intron | 35.0% | |
| ACAGAGCAGGTAAAAGAATT+AGG | + | chr8.4:45186184-45186203 | None:intergenic | 35.0% | |
| ACATTCCTCCACAATATTCT+GGG | - | chr8.4:45187571-45187590 | MS.gene071694:intron | 35.0% | |
| ATGATGTGATTAAGGCTAGA+AGG | - | chr8.4:45187065-45187084 | MS.gene071694:intron | 35.0% | |
| ATTAACATGAACATGCTGGT+AGG | - | chr8.4:45186133-45186152 | MS.gene071694:intron | 35.0% | |
| CTTAATTCCTTAATCTCTCC+AGG | - | chr8.4:45183946-45183965 | MS.gene071694:intron | 35.0% | |
| GAAAACTTGGACAAGAAACT+TGG | - | chr8.4:45188925-45188944 | MS.gene071694:intron | 35.0% | |
| GACTAACCAGTTTATTGGAA+TGG | + | chr8.4:45183767-45183786 | None:intergenic | 35.0% | |
| GATATCCAGGTAATTTCTCA+TGG | - | chr8.4:45185219-45185238 | MS.gene071694:CDS | 35.0% | |
| GCATGTTGAATGCTAATTAC+TGG | + | chr8.4:45186752-45186771 | None:intergenic | 35.0% | |
| GCTATTGTCAATTCTAACAC+TGG | - | chr8.4:45189101-45189120 | MS.gene071694:intron | 35.0% | |
| GCTTTCAAATGAAAGAGGAA+CGG | - | chr8.4:45187737-45187756 | MS.gene071694:CDS | 35.0% | |
| GGAAATGTTTGTATAGACTC+TGG | + | chr8.4:45185364-45185383 | None:intergenic | 35.0% | |
| GGATATACTTATCCTGATTG+AGG | - | chr8.4:45187178-45187197 | MS.gene071694:intron | 35.0% | |
| GGCATATATTACTTCGTACA+GGG | - | chr8.4:45184871-45184890 | MS.gene071694:intron | 35.0% | |
| GTAATTCTGCTTGGATAATG+GGG | - | chr8.4:45184158-45184177 | MS.gene071694:intron | 35.0% | |
| TAACCAGTTTATTGGAATGG+AGG | + | chr8.4:45183764-45183783 | None:intergenic | 35.0% | |
| TAAGGGACTAACCAGTTTAT+TGG | + | chr8.4:45183772-45183791 | None:intergenic | 35.0% | |
| TAAGTTGTACTACCTCAATC+AGG | + | chr8.4:45187193-45187212 | None:intergenic | 35.0% | |
| TACTCTTAAATGCAGTGGAA+TGG | + | chr8.4:45187982-45188001 | None:intergenic | 35.0% | |
| TAGTGACATTGATGTCTTTC+TGG | - | chr8.4:45186203-45186222 | MS.gene071694:intron | 35.0% | |
| TATCAGTTCTGTTTGATGCA+TGG | - | chr8.4:45187699-45187718 | MS.gene071694:intron | 35.0% | |
| TATGATGATTGAACAACGCA+AGG | + | chr8.4:45187818-45187837 | None:intergenic | 35.0% | |
| TATGCGAAGACTGAAACATA+CGG | - | chr8.4:45185040-45185059 | MS.gene071694:CDS | 35.0% | |
| TATTGGGGTATGTACCTTAT+TGG | - | chr8.4:45187923-45187942 | MS.gene071694:CDS | 35.0% | |
| TCATAAGTCAAAACAAGGAG+GGG | - | chr8.4:45187763-45187782 | MS.gene071694:CDS | 35.0% | |
| TCATCAGTGGAAACAAACAT+TGG | - | chr8.4:45186863-45186882 | MS.gene071694:CDS | 35.0% | |
| TCATCTTGATTGTATTGGGT+AGG | - | chr8.4:45186616-45186635 | MS.gene071694:intron | 35.0% | |
| TCTACACTTATCCAACAACA+GGG | - | chr8.4:45185118-45185137 | MS.gene071694:intron | 35.0% | |
| TCTAGTCCACTTATCTTCTT+AGG | - | chr8.4:45186318-45186337 | MS.gene071694:intron | 35.0% | |
| TCTCTTCGTCTAAACTCTTA+CGG | + | chr8.4:45186716-45186735 | None:intergenic | 35.0% | |
| TCTGATCTGTACATACTATG+TGG | - | chr8.4:45185766-45185785 | MS.gene071694:intron | 35.0% | |
| TTAAGAGTAGCAGATGGTTT+CGG | - | chr8.4:45187993-45188012 | MS.gene071694:intron | 35.0% | |
| TTAATCAATCACCCTGTTGT+TGG | + | chr8.4:45185132-45185151 | None:intergenic | 35.0% | |
| TTAGAAGACATGGACGTAAA+AGG | - | chr8.4:45187157-45187176 | MS.gene071694:intron | 35.0% | |
| TTCTACACTTATCCAACAAC+AGG | - | chr8.4:45185117-45185136 | MS.gene071694:intron | 35.0% | |
| TTGGCTCATGTTAAACTTCT+GGG | + | chr8.4:45184762-45184781 | None:intergenic | 35.0% | |
| TTTCCTCAAATAGGTGCATT+TGG | - | chr8.4:45187479-45187498 | MS.gene071694:intron | 35.0% | |
| TTTCTGTTTGCTTCATTGCT+AGG | - | chr8.4:45184225-45184244 | MS.gene071694:intron | 35.0% | |
| ! | ACCTTAGTTCTTAGAAGACA+TGG | - | chr8.4:45187147-45187166 | MS.gene071694:intron | 35.0% |
| ! | AGCTTTTCTTTTACCAGAAC+AGG | + | chr8.4:45188042-45188061 | None:intergenic | 35.0% |
| ! | CAGAAAGAGATGTTACTTGA+GGG | - | chr8.4:45187267-45187286 | MS.gene071694:intron | 35.0% |
| ! | GTTGGTTTCATAAGTAATCC+TGG | + | chr8.4:45183967-45183986 | None:intergenic | 35.0% |
| ! | TATAACAGTCTTGTGCATCT+TGG | - | chr8.4:45184988-45185007 | MS.gene071694:CDS | 35.0% |
| ! | TCCATGTCTTCTAAGAACTA+AGG | + | chr8.4:45187151-45187170 | None:intergenic | 35.0% |
| ! | TGTGAGTGTTGTATACTTCA+GGG | - | chr8.4:45188588-45188607 | MS.gene071694:intron | 35.0% |
| ! | TTGCACAATCGATTCACTTA+TGG | - | chr8.4:45186579-45186598 | MS.gene071694:intron | 35.0% |
| ! | TTTGGCTCATGTTAAACTTC+TGG | + | chr8.4:45184763-45184782 | None:intergenic | 35.0% |
| !! | ACATGAGCCAAATTTTGAAG+CGG | - | chr8.4:45184771-45184790 | MS.gene071694:CDS | 35.0% |
| !! | AGTACTGAAGTTTTACTTCC+AGG | + | chr8.4:45189138-45189157 | None:intergenic | 35.0% |
| !! | TTTGATTTTACCCCTCTAAC+CGG | + | chr8.4:45186938-45186957 | None:intergenic | 35.0% |
| !!! | AGTCTGGCCTTATTTTTATC+TGG | - | chr8.4:45184006-45184025 | MS.gene071694:intron | 35.0% |
| !!! | CATCGTCATTTTTCTTCTTC+AGG | + | chr8.4:45184334-45184353 | None:intergenic | 35.0% |
| !!! | GAGGGGATTTTTAGCATATT+TGG | - | chr8.4:45187780-45187799 | MS.gene071694:CDS | 35.0% |
| !!! | TTTTTTTTCTTTCCCCCTAC+AGG | - | chr8.4:45187899-45187918 | MS.gene071694:CDS | 35.0% |
| !!! | TTTTTTTTTTGTTGTGGGGC+GGG | - | chr8.4:45184518-45184537 | MS.gene071694:intron | 35.0% |
| AAAACCCCAGAATATTGTGG+AGG | + | chr8.4:45187579-45187598 | None:intergenic | 40.0% | |
| AAATCAGATGATGAACCTCC+AGG | + | chr8.4:45184830-45184849 | None:intergenic | 40.0% | |
| AACCTTGCTAAAGAGTGAAC+TGG | + | chr8.4:45185472-45185491 | None:intergenic | 40.0% | |
| AACGGATAAGCTTAAAGCAC+CGG | - | chr8.4:45186916-45186935 | MS.gene071694:intron | 40.0% | |
| ACACCATAGTAACATATGGC+AGG | + | chr8.4:45188290-45188309 | None:intergenic | 40.0% | |
| ACATACCCCAATATCCTGTA+GGG | + | chr8.4:45187916-45187935 | None:intergenic | 40.0% | |
| ACTTCCATACACTTAACTGC+AGG | - | chr8.4:45184804-45184823 | MS.gene071694:CDS | 40.0% | |
| AGGAGAGCCCAATTCTATTA+GGG | - | chr8.4:45184850-45184869 | MS.gene071694:intron | 40.0% | |
| AGGTAGGTTCCCAAATTTCT+TGG | - | chr8.4:45185318-45185337 | MS.gene071694:intron | 40.0% | |
| ATGAAGCTATGTTGCTAGCT+AGG | - | chr8.4:45184555-45184574 | MS.gene071694:intron | 40.0% | |
| ATGGTTTCGGATGAGAGTTT+GGG | - | chr8.4:45188006-45188025 | MS.gene071694:intron | 40.0% | |
| CAACCTGCCATATGTTACTA+TGG | - | chr8.4:45188284-45188303 | MS.gene071694:intron | 40.0% | |
| CACAGTTAATAACCTGACTC+GGG | + | chr8.4:45188132-45188151 | None:intergenic | 40.0% | |
| CATTCCTCCACAATATTCTG+GGG | - | chr8.4:45187572-45187591 | MS.gene071694:intron | 40.0% | |
| CCAAAAACCCCAGAATATTG+TGG | + | chr8.4:45187582-45187601 | None:intergenic | 40.0% | |
| CCATTACCCGCTTCAAAATT+TGG | + | chr8.4:45184781-45184800 | None:intergenic | 40.0% | |
| CCTCAAGTAACATCTCTTTC+TGG | + | chr8.4:45187269-45187288 | None:intergenic | 40.0% | |
| CTGCATTTAAGAGTAGCAGA+TGG | - | chr8.4:45187987-45188006 | MS.gene071694:intron | 40.0% | |
| GAGGGATAATTTAGTCTGTG+AGG | - | chr8.4:45187285-45187304 | MS.gene071694:intron | 40.0% | |
| GCACAGTTAATAACCTGACT+CGG | + | chr8.4:45188133-45188152 | None:intergenic | 40.0% | |
| GCCAACACCATAGTAACATA+TGG | + | chr8.4:45188294-45188313 | None:intergenic | 40.0% | |
| GCCATATGTTACTATGGTGT+TGG | - | chr8.4:45188290-45188309 | MS.gene071694:intron | 40.0% | |
| GCTTTGTGTGTCAATGAACT+TGG | + | chr8.4:45184110-45184129 | None:intergenic | 40.0% | |
| GGAAAGAATTTCACGGAGAA+CGG | - | chr8.4:45188169-45188188 | MS.gene071694:intron | 40.0% | |
| GGAGGTTCATCATCTGATTT+AGG | - | chr8.4:45184830-45184849 | MS.gene071694:CDS | 40.0% | |
| GGCTTGTGGAAAGAATTTCA+CGG | - | chr8.4:45188162-45188181 | MS.gene071694:intron | 40.0% | |
| GGGCATATATTACTTCGTAC+AGG | - | chr8.4:45184870-45184889 | MS.gene071694:intron | 40.0% | |
| GGTCGCAAATGATGTGATTA+AGG | - | chr8.4:45187057-45187076 | MS.gene071694:intron | 40.0% | |
| GTAGAGAAAAAGGAATGGGT+GGG | - | chr8.4:45185638-45185657 | MS.gene071694:intron | 40.0% | |
| GTGGAGATAAAGTGGAATCT+TGG | - | chr8.4:45188695-45188714 | MS.gene071694:intron | 40.0% | |
| TACATACCCCAATATCCTGT+AGG | + | chr8.4:45187917-45187936 | None:intergenic | 40.0% | |
| TACTTCGTACAGGGTTATTG+TGG | - | chr8.4:45184880-45184899 | MS.gene071694:intron | 40.0% | |
| TAGAGAAAAAGGAATGGGTG+GGG | - | chr8.4:45185639-45185658 | MS.gene071694:intron | 40.0% | |
| TAGGAGAGCCCAATTCTATT+AGG | - | chr8.4:45184849-45184868 | MS.gene071694:intron | 40.0% | |
| TAGGTGCATTTGGCTGAATA+TGG | - | chr8.4:45187489-45187508 | MS.gene071694:intron | 40.0% | |
| TCAAATGTACCATGTGGAAG+AGG | - | chr8.4:45186839-45186858 | MS.gene071694:intron | 40.0% | |
| TCAATGAACTTGGCCGTATT+TGG | + | chr8.4:45184100-45184119 | None:intergenic | 40.0% | |
| TCACCTCCATTCCAATAAAC+TGG | - | chr8.4:45183758-45183777 | MS.gene071694:intron | 40.0% | |
| TCAGTCTTCGCATATCTTCT+AGG | + | chr8.4:45185034-45185053 | None:intergenic | 40.0% | |
| TCTGCTACTCTTAAATGCAG+TGG | + | chr8.4:45187987-45188006 | None:intergenic | 40.0% | |
| TGAAACATACGGAGCTAGTT+TGG | - | chr8.4:45185051-45185070 | MS.gene071694:CDS | 40.0% | |
| TGATCCAATGAACAGAACAG+AGG | + | chr8.4:45188347-45188366 | None:intergenic | 40.0% | |
| TGTAGAGAAAAAGGAATGGG+TGG | - | chr8.4:45185637-45185656 | MS.gene071694:intron | 40.0% | |
| TTCGTTCTTGTTACCACAAC+TGG | - | chr8.4:45186346-45186365 | MS.gene071694:intron | 40.0% | |
| TTGAAACTCCTATGCTCAGA+AGG | + | chr8.4:45184359-45184378 | None:intergenic | 40.0% | |
| TTTGGATCACTTGTCCTAGT+AGG | - | chr8.4:45187597-45187616 | MS.gene071694:intron | 40.0% | |
| ! | AACAGATTTAGGTTAAGGGG+TGG | + | chr8.4:45186974-45186993 | None:intergenic | 40.0% |
| ! | ACAGATTTAGGTTAAGGGGT+GGG | + | chr8.4:45186973-45186992 | None:intergenic | 40.0% |
| ! | CCAGAAAGAGATGTTACTTG+AGG | - | chr8.4:45187266-45187285 | MS.gene071694:intron | 40.0% |
| ! | GCTGTTTCAAATGTACCATG+TGG | - | chr8.4:45186833-45186852 | MS.gene071694:intron | 40.0% |
| ! | GTGTGAGTGTTGTATACTTC+AGG | - | chr8.4:45188587-45188606 | MS.gene071694:intron | 40.0% |
| !! | GCTGAAAAAGAGTGTCCATT+CGG | + | chr8.4:45189083-45189102 | None:intergenic | 40.0% |
| !! | TGTCTTGAAGTGTCGTGTAA+GGG | + | chr8.4:45183789-45183808 | None:intergenic | 40.0% |
| !!! | CATGAGCCAAATTTTGAAGC+GGG | - | chr8.4:45184772-45184791 | MS.gene071694:CDS | 40.0% |
| !!! | CCAAATTTTGAAGCGGGTAA+TGG | - | chr8.4:45184778-45184797 | MS.gene071694:CDS | 40.0% |
| !!! | CCACAATATTCTGGGGTTTT+TGG | - | chr8.4:45187579-45187598 | MS.gene071694:intron | 40.0% |
| ACTGATGAACCTCTTCCACA+TGG | + | chr8.4:45186851-45186870 | None:intergenic | 45.0% | |
| AGAGAAAAAGGAATGGGTGG+GGG | - | chr8.4:45185640-45185659 | MS.gene071694:intron | 45.0% | |
| ATACCCCAATATCCTGTAGG+GGG | + | chr8.4:45187914-45187933 | None:intergenic | 45.0% | |
| ATGTGGAAGAGGTTCATCAG+TGG | - | chr8.4:45186850-45186869 | MS.gene071694:CDS | 45.0% | |
| CAGCCAAATGCACCTATTTG+AGG | + | chr8.4:45187485-45187504 | None:intergenic | 45.0% | |
| CATACCCCAATATCCTGTAG+GGG | + | chr8.4:45187915-45187934 | None:intergenic | 45.0% | |
| CATCAATGTCACTACAGAGC+AGG | + | chr8.4:45186197-45186216 | None:intergenic | 45.0% | |
| CGTACAGGGTTATTGTGGTA+TGG | - | chr8.4:45184885-45184904 | MS.gene071694:intron | 45.0% | |
| CTCACCTCTGTTCTGTTCAT+TGG | - | chr8.4:45188340-45188359 | MS.gene071694:intron | 45.0% | |
| CTCCAGTTCACTCTTTAGCA+AGG | - | chr8.4:45185467-45185486 | MS.gene071694:intron | 45.0% | |
| CTGATAATCCACACCAGTTG+TGG | + | chr8.4:45186362-45186381 | None:intergenic | 45.0% | |
| CTTTCCCCCTACAGGATATT+GGG | - | chr8.4:45187907-45187926 | MS.gene071694:CDS | 45.0% | |
| GATGGTTTCGGATGAGAGTT+TGG | - | chr8.4:45188005-45188024 | MS.gene071694:intron | 45.0% | |
| GGGTTCTATCAATCCTGTTC+TGG | - | chr8.4:45188026-45188045 | MS.gene071694:intron | 45.0% | |
| TCTGCATTGCAGATGGATCT+TGG | - | chr8.4:45185855-45185874 | MS.gene071694:intron | 45.0% | |
| TCTTGTTACCACAACTGGTG+TGG | - | chr8.4:45186351-45186370 | MS.gene071694:intron | 45.0% | |
| TCTTTCCCCCTACAGGATAT+TGG | - | chr8.4:45187906-45187925 | MS.gene071694:CDS | 45.0% | |
| TGGCTGAATATGGTGTGCAT+TGG | - | chr8.4:45187499-45187518 | MS.gene071694:intron | 45.0% | |
| TGTGCTTCTAGATAGGCTTG+TGG | - | chr8.4:45188148-45188167 | MS.gene071694:intron | 45.0% | |
| TTAAAAGTTAAGGGGTGGGG+AGG | - | chr8.4:45185298-45185317 | MS.gene071694:intron | 45.0% | |
| TTACTCGAAGGGCTTTCTGT+TGG | - | chr8.4:45188216-45188235 | MS.gene071694:intron | 45.0% | |
| TTTCCCCCTACAGGATATTG+GGG | - | chr8.4:45187908-45187927 | MS.gene071694:CDS | 45.0% | |
| ! | AACTGGTGTGGATTATCAGG+TGG | - | chr8.4:45186363-45186382 | MS.gene071694:intron | 45.0% |
| ! | ACACTGGCTGATCTTATTCC+TGG | - | chr8.4:45189117-45189136 | MS.gene071694:intron | 45.0% |
| ! | ACATACGGAGCTAGTTTGGT+AGG | - | chr8.4:45185055-45185074 | MS.gene071694:CDS | 45.0% |
| ! | ACTGGTGTGGATTATCAGGT+GGG | - | chr8.4:45186364-45186383 | MS.gene071694:intron | 45.0% |
| ! | AGATTTAGGTTAAGGGGTGG+GGG | + | chr8.4:45186971-45186990 | None:intergenic | 45.0% |
| ! | ATGAACTTGGTGACAGGTAC+TGG | - | chr8.4:45184620-45184639 | MS.gene071694:CDS | 45.0% |
| ! | CACAACTGGTGTGGATTATC+AGG | - | chr8.4:45186360-45186379 | MS.gene071694:intron | 45.0% |
| ! | CAGATTTAGGTTAAGGGGTG+GGG | + | chr8.4:45186972-45186991 | None:intergenic | 45.0% |
| ! | GCTACAATGAACTTGGTGAC+AGG | - | chr8.4:45184614-45184633 | MS.gene071694:CDS | 45.0% |
| ! | TGACTCGGGCATCATGAAAA+AGG | + | chr8.4:45188118-45188137 | None:intergenic | 45.0% |
| ! | TTGCAGATGGATCTTGGTGT+TGG | - | chr8.4:45185861-45185880 | MS.gene071694:intron | 45.0% |
| ! | TTGGGGGTGTAGTTTCTCTA+TGG | - | chr8.4:45185443-45185462 | MS.gene071694:intron | 45.0% |
| ! | TTTTTCATGATGCCCGAGTC+AGG | - | chr8.4:45188117-45188136 | MS.gene071694:CDS | 45.0% |
| !! | AAGCTTAAAGCACCGGTTAG+AGG | - | chr8.4:45186923-45186942 | MS.gene071694:intron | 45.0% |
| !! | AGCTTAAAGCACCGGTTAGA+GGG | - | chr8.4:45186924-45186943 | MS.gene071694:intron | 45.0% |
| !! | CTGTCTTGAAGTGTCGTGTA+AGG | + | chr8.4:45183790-45183809 | None:intergenic | 45.0% |
| !! | GTGTTGGCTGACAATCTACA+GGG | - | chr8.4:45188306-45188325 | MS.gene071694:intron | 45.0% |
| !!! | TACATATTTTTTTAAATAAA+CGG | - | chr8.4:45186898-45186917 | MS.gene071694:CDS | 5.0% |
| AAAAAGGAATGGGTGGGGGT+TGG | - | chr8.4:45185644-45185663 | MS.gene071694:intron | 50.0% | |
| ACGATGCACCTTCTGAGCAT+AGG | - | chr8.4:45184348-45184367 | MS.gene071694:intron | 50.0% | |
| CAGGCCTGCAGTTAAGTGTA+TGG | + | chr8.4:45184811-45184830 | None:intergenic | 50.0% | |
| CATACACTTAACTGCAGGCC+TGG | - | chr8.4:45184809-45184828 | MS.gene071694:CDS | 50.0% | |
| GATTTCGAGCAACGAGGAAC+CGG | + | chr8.4:45183606-45183625 | None:intergenic | 50.0% | |
| GCTCGAAATCGTGGCTCTTA+CGG | - | chr8.4:45183616-45183635 | MS.gene071694:CDS | 50.0% | |
| TGTCAAGTGATTGGTGCGCA+GGG | - | chr8.4:45188563-45188582 | MS.gene071694:intron | 50.0% | |
| TTCCTCGTTGCTCGAAATCG+TGG | - | chr8.4:45183607-45183626 | MS.gene071694:CDS | 50.0% | |
| ! | CTGACTTGTGAAGGGATTCG+AGG | - | chr8.4:45185499-45185518 | MS.gene071694:intron | 50.0% |
| ! | GATTTAGGTTAAGGGGTGGG+GGG | + | chr8.4:45186970-45186989 | None:intergenic | 50.0% |
| !! | GCTTAAAGCACCGGTTAGAG+GGG | - | chr8.4:45186925-45186944 | MS.gene071694:intron | 50.0% |
| !! | GGTGTTGGCTGACAATCTAC+AGG | - | chr8.4:45188305-45188324 | MS.gene071694:intron | 50.0% |
| !!! | TTTTTTTGTTGTGGGGCGGG+AGG | - | chr8.4:45184521-45184540 | MS.gene071694:intron | 50.0% |
| AAGTTAAGGGGTGGGGAGGT+AGG | - | chr8.4:45185302-45185321 | MS.gene071694:intron | 55.0% | |
| ACACTTAACTGCAGGCCTGG+AGG | - | chr8.4:45184812-45184831 | MS.gene071694:CDS | 55.0% | |
| AGCCACGATTTCGAGCAACG+AGG | + | chr8.4:45183612-45183631 | None:intergenic | 55.0% | |
| CTGTCAAGTGATTGGTGCGC+AGG | - | chr8.4:45188562-45188581 | MS.gene071694:intron | 55.0% | |
| GAAGAAGCAGGGGAGAGAGA+GGG | + | chr8.4:45185385-45185404 | None:intergenic | 55.0% | |
| GGGCTTTCTGTTGGCACCAA+TGG | - | chr8.4:45188225-45188244 | MS.gene071694:intron | 55.0% | |
| TGAAGAAGCAGGGGAGAGAG+AGG | + | chr8.4:45185386-45185405 | None:intergenic | 55.0% | |
| GGGTGGGGGTTGGAGAGAAT+AGG | - | chr8.4:45185654-45185673 | MS.gene071694:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 45183586 | 45189200 | 45183586 | ID=MS.gene071694 |
| chr8.4 | mRNA | 45183586 | 45189200 | 45183586 | ID=MS.gene071694.t1;Parent=MS.gene071694 |
| chr8.4 | exon | 45189137 | 45189200 | 45189137 | ID=MS.gene071694.t1.exon1;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45189137 | 45189200 | 45189137 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45189003 | 45189053 | 45189003 | ID=MS.gene071694.t1.exon2;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45189003 | 45189053 | 45189003 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45188368 | 45188508 | 45188368 | ID=MS.gene071694.t1.exon3;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45188368 | 45188508 | 45188368 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45188077 | 45188150 | 45188077 | ID=MS.gene071694.t1.exon4;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45188077 | 45188150 | 45188077 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45187878 | 45187960 | 45187878 | ID=MS.gene071694.t1.exon5;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45187878 | 45187960 | 45187878 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45187714 | 45187814 | 45187714 | ID=MS.gene071694.t1.exon6;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45187714 | 45187814 | 45187714 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45186846 | 45186919 | 45186846 | ID=MS.gene071694.t1.exon7;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45186846 | 45186919 | 45186846 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45186367 | 45186493 | 45186367 | ID=MS.gene071694.t1.exon8;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45186367 | 45186493 | 45186367 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45185168 | 45185294 | 45185168 | ID=MS.gene071694.t1.exon9;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45185168 | 45185294 | 45185168 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45184985 | 45185089 | 45184985 | ID=MS.gene071694.t1.exon10;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45184985 | 45185089 | 45184985 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45184739 | 45184865 | 45184739 | ID=MS.gene071694.t1.exon11;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45184739 | 45184865 | 45184739 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45184596 | 45184647 | 45184596 | ID=MS.gene071694.t1.exon12;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45184596 | 45184647 | 45184596 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45184433 | 45184504 | 45184433 | ID=MS.gene071694.t1.exon13;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45184433 | 45184504 | 45184433 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| chr8.4 | exon | 45183586 | 45183684 | 45183586 | ID=MS.gene071694.t1.exon14;Parent=MS.gene071694.t1 |
| chr8.4 | CDS | 45183586 | 45183684 | 45183586 | ID=cds.MS.gene071694.t1;Parent=MS.gene071694.t1 |
| Gene Sequence |
| Protein sequence |
