AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072102

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072102.t1 MTR_2g005330 98.728 393 5 0 1 393 1 393 0.0 811
MS.gene072102.t1 MTR_2g005330 98.240 341 6 0 1 341 1 341 0.0 699
MS.gene072102.t1 MTR_2g005330 100.000 251 0 0 143 393 1 251 0.0 532
MS.gene072102.t1 MTR_1g078290 54.945 364 151 5 30 384 32 391 1.10e-147 424
MS.gene072102.t1 MTR_1g078290 54.094 342 147 4 30 365 32 369 1.21e-134 390
MS.gene072102.t1 MTR_1g078290 56.875 320 128 4 30 343 32 347 7.95e-134 389
MS.gene072102.t1 MTR_2g012570 55.205 317 132 2 80 386 52 368 1.50e-127 372
MS.gene072102.t1 MTR_2g012570 55.205 317 132 2 80 386 78 394 1.59e-127 373
MS.gene072102.t1 MTR_4g090465 55.049 307 134 3 80 384 428 732 6.59e-121 367
MS.gene072102.t1 MTR_2g012570 62.016 258 97 1 80 336 52 309 3.71e-118 347
MS.gene072102.t1 MTR_2g012570 62.016 258 97 1 80 336 78 335 3.75e-118 347
MS.gene072102.t1 MTR_1g078290 56.098 287 116 4 30 310 32 314 9.75e-118 345
MS.gene072102.t1 MTR_7g033300 45.151 299 151 6 76 374 88 373 1.90e-81 254
MS.gene072102.t1 MTR_8g089820 44.482 299 152 7 76 374 89 373 1.26e-80 253
MS.gene072102.t1 MTR_3g086610 45.390 282 146 6 58 339 80 353 2.48e-80 251
MS.gene072102.t1 MTR_3g086610 45.390 282 146 6 58 339 80 353 4.94e-80 251
MS.gene072102.t1 MTR_8g089815 46.840 269 131 7 76 344 97 353 7.01e-79 248
MS.gene072102.t1 MTR_2g094650 42.500 320 168 8 56 375 77 380 1.04e-78 248
MS.gene072102.t1 MTR_4g058800 44.147 299 153 8 76 374 77 361 2.20e-77 243
MS.gene072102.t1 MTR_2g094650 42.500 320 167 9 56 375 77 379 2.39e-77 244
MS.gene072102.t1 MTR_4g014280 57.143 63 25 2 73 135 16 76 2.01e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072102.t1 AT4G18530 61.880 383 130 3 17 383 2 384 0.0 508
MS.gene072102.t1 AT4G18530 61.880 383 130 3 17 383 7 389 0.0 508
MS.gene072102.t1 AT4G12840 55.820 378 143 5 21 384 27 394 1.35e-156 447
MS.gene072102.t1 AT4G12840 55.820 378 143 5 21 384 27 394 2.07e-156 446
MS.gene072102.t1 AT4G18530 64.765 298 100 1 17 309 7 304 2.29e-147 420
MS.gene072102.t1 AT4G12840 60.066 303 103 3 96 384 2 300 1.85e-136 392
MS.gene072102.t1 AT1G11170 53.526 312 136 2 80 382 83 394 1.44e-119 354
MS.gene072102.t1 AT1G11170 53.526 312 136 2 80 382 83 394 1.44e-119 354
MS.gene072102.t1 AT1G11170 53.526 312 136 2 80 382 83 394 1.44e-119 354
MS.gene072102.t1 AT1G11170 53.526 312 136 2 80 382 83 394 1.44e-119 354
MS.gene072102.t1 AT1G61240 52.548 314 135 4 80 381 13 324 1.11e-114 339
MS.gene072102.t1 AT1G61240 52.548 314 135 4 80 381 80 391 5.89e-114 339
MS.gene072102.t1 AT1G61240 52.548 314 135 4 80 381 80 391 5.89e-114 339
MS.gene072102.t1 AT1G61240 52.548 314 135 4 80 381 80 391 5.89e-114 339
MS.gene072102.t1 AT1G61240 52.548 314 135 4 80 381 80 391 5.89e-114 339
MS.gene072102.t1 AT1G61240 52.548 314 135 4 80 381 80 391 5.89e-114 339
MS.gene072102.t1 AT1G61240 52.548 314 135 4 80 381 80 391 5.89e-114 339
MS.gene072102.t1 AT1G11170 58.755 257 105 1 80 335 83 339 1.33e-110 328
MS.gene072102.t1 AT1G11170 58.755 257 105 1 80 335 83 339 1.33e-110 328
MS.gene072102.t1 AT1G11170 58.755 257 105 1 80 335 83 339 1.75e-110 328
MS.gene072102.t1 AT1G61240 54.671 289 120 4 80 365 80 360 1.21e-107 321
MS.gene072102.t1 AT1G11170 57.143 231 98 1 80 309 83 313 3.56e-95 288
MS.gene072102.t1 AT3G27470 45.016 311 155 9 66 374 85 381 4.56e-81 254
MS.gene072102.t1 AT3G27470 45.016 311 155 9 66 374 85 381 4.56e-81 254
MS.gene072102.t1 AT3G27470 45.016 311 155 9 66 374 85 381 4.56e-81 254
MS.gene072102.t1 AT3G27470 45.016 311 155 9 66 374 85 381 4.56e-81 254
MS.gene072102.t1 AT3G27470 45.016 311 155 9 66 374 85 381 1.18e-80 253
MS.gene072102.t1 AT1G13000 44.340 318 156 8 76 393 105 401 1.34e-80 253
MS.gene072102.t1 AT1G13000 44.340 318 156 8 76 393 105 401 1.34e-80 253
MS.gene072102.t1 AT1G13000 44.340 318 156 8 76 393 105 401 1.34e-80 253
MS.gene072102.t1 AT1G13000 44.340 318 156 8 76 393 105 401 1.34e-80 253
MS.gene072102.t1 AT3G26440 44.333 300 154 7 76 375 71 357 4.56e-79 248
MS.gene072102.t1 AT3G26440 44.333 300 154 7 76 375 95 381 5.82e-79 249
MS.gene072102.t1 AT3G26440 44.333 300 154 7 76 375 95 381 5.82e-79 249
MS.gene072102.t1 AT3G26440 44.333 300 154 7 76 375 118 404 8.09e-79 249
MS.gene072102.t1 AT3G26440 44.333 300 154 7 76 375 118 404 8.35e-79 249
MS.gene072102.t1 AT3G26440 47.761 268 132 7 76 342 95 355 1.53e-78 247
MS.gene072102.t1 AT1G24570 43.034 323 161 10 76 393 84 388 2.13e-78 247
MS.gene072102.t1 AT2G28310 43.000 300 157 7 76 375 81 366 2.16e-77 244
MS.gene072102.t1 AT2G28310 43.000 300 157 7 76 375 81 366 2.16e-77 244
MS.gene072102.t1 AT2G28310 43.000 300 157 7 76 375 81 366 2.16e-77 244
MS.gene072102.t1 AT1G67850 44.186 301 150 9 76 374 85 369 9.58e-77 243
MS.gene072102.t1 AT1G24570 42.812 320 160 10 79 393 80 381 9.82e-77 242
MS.gene072102.t1 AT1G67850 44.186 301 150 9 76 374 101 385 1.70e-76 243
MS.gene072102.t1 AT1G67850 44.186 301 150 9 76 374 101 385 1.70e-76 243
MS.gene072102.t1 AT1G67850 44.186 301 150 9 76 374 101 385 1.70e-76 243
MS.gene072102.t1 AT1G67850 44.186 301 150 9 76 374 101 385 1.70e-76 243
MS.gene072102.t1 AT1G67850 44.186 301 150 9 76 374 101 385 1.70e-76 243
MS.gene072102.t1 AT1G67850 44.186 301 150 9 76 374 101 385 1.70e-76 243
MS.gene072102.t1 AT1G08040 45.455 264 136 6 76 339 84 339 5.48e-76 240
MS.gene072102.t1 AT1G08040 45.455 264 136 6 76 339 88 343 5.96e-76 240
MS.gene072102.t1 AT1G08040 45.455 264 136 6 76 339 88 343 5.96e-76 240
MS.gene072102.t1 AT1G08040 45.455 264 136 6 76 339 88 343 5.96e-76 240
MS.gene072102.t1 AT1G13000 50.000 234 110 5 76 309 105 331 9.70e-73 231
MS.gene072102.t1 AT1G11170 56.213 169 73 1 80 247 83 251 4.08e-62 201
MS.gene072102.t1 AT2G25905 56.410 117 49 2 112 227 112 227 1.59e-37 135

Find 86 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTTGCATGCATTATAAT+TGG 0.181664 2.4:+76627723 None:intergenic
GTCTATCACTATCATCTCTA+TGG 0.225660 2.4:+76624218 None:intergenic
ACTTGGAAACACGGCCCTTA+TGG 0.226492 2.4:-76627548 MS.gene072102:CDS
AGAAGGTATTATAAGTTTAA+AGG 0.258399 2.4:-76625360 MS.gene072102:CDS
TAGAAACAATGCCGCCCTTC+TGG 0.265339 2.4:-76627612 MS.gene072102:CDS
ATGTCAGGGTGTTGTCTTTC+CGG 0.282197 2.4:-76627991 MS.gene072102:intron
ATCTTGGCCTGCCCACTCTC+GGG 0.330732 2.4:-76624513 MS.gene072102:CDS
TTTGCCTGTTGTTGTTCATA+TGG 0.345241 2.4:+76624022 None:intergenic
TGTTGATAAAATCGTCAAAA+AGG 0.352435 2.4:-76627177 MS.gene072102:intron
CTTGGAAACACGGCCCTTAT+GGG 0.353916 2.4:-76627547 MS.gene072102:CDS
CATCTTGGCCTGCCCACTCT+CGG 0.356953 2.4:-76624514 MS.gene072102:CDS
ACTACAATTATATATTTCTC+TGG 0.371844 2.4:-76626816 MS.gene072102:CDS
TTATCTATTGTTAAAGAAGA+AGG 0.390831 2.4:-76625930 MS.gene072102:CDS
TAATTGGATGTTGTTGTATC+CGG 0.391753 2.4:+76627739 None:intergenic
TATTATAAGTTTAAAGGTAG+TGG 0.396361 2.4:-76625354 MS.gene072102:CDS
ATTCTTCTTTCCTTGATTTG+CGG 0.396540 2.4:-76627933 MS.gene072102:CDS
TGTTGCTAGGACCTCTAACT+TGG 0.414531 2.4:-76627565 MS.gene072102:CDS
GAAATAGCCAACAAATTCAA+TGG 0.422490 2.4:+76627224 None:intergenic
TTGTAGTCAGCAACTATGTC+TGG 0.429649 2.4:+76626832 None:intergenic
GGGCCGTGTTTCCAAGTTAG+AGG 0.432570 2.4:+76627554 None:intergenic
GAACCACCCATTGAATTTGT+TGG 0.435886 2.4:-76627231 MS.gene072102:CDS
CTGCTATAAATCAAACGAAA+TGG 0.446330 2.4:-76626977 MS.gene072102:intron
AGCACCGCTCCTCCTTGCTT+AGG 0.450748 2.4:-76625315 MS.gene072102:CDS
CATTATGATGGCTTTGTGGA+TGG 0.458349 2.4:-76627041 MS.gene072102:CDS
CGCCGGTGGCAGTTCCCGTC+AGG 0.464620 2.4:-76627086 MS.gene072102:intron
TGATCCATATGAACAACAAC+AGG 0.469510 2.4:-76624026 MS.gene072102:CDS
CTTAATCCATGCCTGGGGAC+TGG 0.471837 2.4:-76624695 MS.gene072102:CDS
TCTGAGTACATAGTTCATCT+TGG 0.472659 2.4:-76624529 MS.gene072102:CDS
TCTTGGCCTGCCCACTCTCG+GGG 0.475856 2.4:-76624512 MS.gene072102:CDS
TATCTATTGTTAAAGAAGAA+GGG 0.479300 2.4:-76625929 MS.gene072102:CDS
ATTTATAGCAGACACATGTA+TGG 0.483134 2.4:+76626989 None:intergenic
TCACAGCCTGCACTGGATCC+TGG 0.484940 2.4:-76625897 MS.gene072102:CDS
AGAATGACTTAATCCATGCC+TGG 0.487002 2.4:-76624702 MS.gene072102:CDS
TACACCAGAGTAGTCCCATA+AGG 0.487146 2.4:+76627533 None:intergenic
AAAATAAGCGCCGCAAATCA+AGG 0.491462 2.4:+76627923 None:intergenic
GCACCGCTCCTCCTTGCTTA+GGG 0.492013 2.4:-76625314 MS.gene072102:intron
AGAGATATCACAGCCTGCAC+TGG 0.500200 2.4:-76625904 MS.gene072102:CDS
ATGCCGCCCTTCTGGAACTC+AGG 0.501170 2.4:-76627604 MS.gene072102:CDS
GTCTGTCCAGTCCCCAGGCA+TGG 0.503621 2.4:+76624689 None:intergenic
GGGACTAATTTATTCAATGC+CGG 0.505639 2.4:-76627758 MS.gene072102:CDS
AAATAGCCAACAAATTCAAT+GGG 0.506904 2.4:+76627225 None:intergenic
TTTGCAGAGACTGGCACGAT+GGG 0.509638 2.4:-76627779 MS.gene072102:intron
ACACCAGAGTAGTCCCATAA+GGG 0.519392 2.4:+76627534 None:intergenic
TGATGTATTTCTGATTTACC+AGG 0.521088 2.4:+76625879 None:intergenic
TTATATATTTCTCTGGGATG+AGG 0.522681 2.4:-76626809 MS.gene072102:CDS
ATGGATGGAAGAATTTAGCT+TGG 0.524891 2.4:-76627022 MS.gene072102:CDS
GCAGTCGTATATTGAAATGC+AGG 0.528288 2.4:-76624098 MS.gene072102:CDS
TGGGGACTGGACAGACAACT+TGG 0.530926 2.4:-76624682 MS.gene072102:CDS
TCTATCACTATCATCTCTAT+GGG 0.531315 2.4:+76624219 None:intergenic
AAGTTGTCTGTCCAGTCCCC+AGG 0.535291 2.4:+76624684 None:intergenic
GAATGACTTAATCCATGCCT+GGG 0.537430 2.4:-76624701 MS.gene072102:CDS
AATTTGTTGGCTATTTCAGT+AGG 0.543937 2.4:-76627218 MS.gene072102:CDS
ATGTGTATGGCATATGATCC+AGG 0.543942 2.4:-76625142 MS.gene072102:intron
GATTTACCAGGATCCAGTGC+AGG 0.550120 2.4:+76625891 None:intergenic
CTACAATTATATATTTCTCT+GGG 0.550211 2.4:-76626815 MS.gene072102:CDS
ATCCAATTATAATGCATGCA+AGG 0.552585 2.4:-76627725 MS.gene072102:intron
TGGCAATGCATTCTCTGCAA+AGG 0.554079 2.4:-76627898 MS.gene072102:CDS
GGTCAAAATTATCGACAAGA+AGG 0.554786 2.4:+76626785 None:intergenic
ACAACTTGGTTATTGTGCAC+AGG 0.563090 2.4:-76624668 MS.gene072102:intron
CCACTGACAGTTCATAAAGC+AGG 0.566749 2.4:-76625855 MS.gene072102:CDS
TTACAGATGGGTGGAAATGA+TGG 0.567117 2.4:-76625193 MS.gene072102:intron
ATGATGGCTTTGTGGATGGA+TGG 0.570009 2.4:-76627037 MS.gene072102:CDS
GGAACTCAGGCATTGCCTCA+AGG 0.572669 2.4:-76627591 MS.gene072102:CDS
ATAAGTTTAAAGGTAGTGGA+AGG 0.575466 2.4:-76625350 MS.gene072102:CDS
CGGCCCTTATGGGACTACTC+TGG 0.576231 2.4:-76627537 MS.gene072102:CDS
TGCCTCAAGGAATTGTTGCT+AGG 0.583686 2.4:-76627578 MS.gene072102:CDS
TCACAACAAAATCACCTGAC+GGG 0.594015 2.4:+76627072 None:intergenic
CATATGGATCAATCCAACAT+TGG 0.600150 2.4:+76624038 None:intergenic
ATCACAACAAAATCACCTGA+CGG 0.603807 2.4:+76627071 None:intergenic
GAAGAATGAGGAGTGTCCAA+AGG 0.608039 2.4:+76627949 None:intergenic
GGCAATGCCTGAGTTCCAGA+AGG 0.616770 2.4:+76627597 None:intergenic
TAGCCAACAAATTCAATGGG+TGG 0.620065 2.4:+76627228 None:intergenic
ATGCCTGAGTTCCAGAAGGG+CGG 0.628656 2.4:+76627601 None:intergenic
GCAACTGTTTACCCTAAGCA+AGG 0.637068 2.4:+76625303 None:intergenic
CCTGCTTTATGAACTGTCAG+TGG 0.637785 2.4:+76625855 None:intergenic
AAATCAAGGAAAGAAGAATG+AGG 0.639950 2.4:+76627937 None:intergenic
CTTGGCCTGCCCACTCTCGG+GGG 0.641965 2.4:-76624511 MS.gene072102:CDS
GCAATGCCTGAGTTCCAGAA+GGG 0.649159 2.4:+76627598 None:intergenic
TAACTTGTATTACAGATGGG+TGG 0.651700 2.4:-76625202 MS.gene072102:intron
AAGCAGGATCAAAAGTACAC+AGG 0.658718 2.4:-76625839 MS.gene072102:intron
GGACCTCTAACTTGGAAACA+CGG 0.661334 2.4:-76627557 MS.gene072102:CDS
TTGCAGAGACTGGCACGATG+GGG 0.667525 2.4:-76627778 MS.gene072102:intron
TTACCCTAAGCAAGGAGGAG+CGG 0.668467 2.4:+76625311 None:intergenic
AATGACTTAATCCATGCCTG+GGG 0.719521 2.4:-76624700 MS.gene072102:CDS
GTCCTAGCAACAATTCCTTG+AGG 0.722734 2.4:+76627576 None:intergenic
ACTGTTTACCCTAAGCAAGG+AGG 0.728598 2.4:+76625306 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTTAATATTTACAGATAT+AGG + chr2.4:76625333-76625352 None:intergenic 15.0%
!!! AGAATTTTTTTGACATTTTT+TGG - chr2.4:76627240-76627259 MS.gene072102:CDS 15.0%
!!! ATCACTTTTTTAGTTAAATT+TGG - chr2.4:76627887-76627906 MS.gene072102:CDS 15.0%
!!! TAATTTATCTTAATTTTCAC+TGG + chr2.4:76627156-76627175 None:intergenic 15.0%
!!! TAGATTCTTTGTTTATTAAA+GGG + chr2.4:76628096-76628115 None:intergenic 15.0%
!! AAAATCAACAAATCAAAACA+TGG + chr2.4:76626274-76626293 None:intergenic 20.0%
!! AAATCAACAAATCAAAACAT+GGG + chr2.4:76626273-76626292 None:intergenic 20.0%
!! AAATTCAATTTATCCATCAA+TGG + chr2.4:76625645-76625664 None:intergenic 20.0%
!! AAATTTGAGCTTAACATTAA+CGG + chr2.4:76624775-76624794 None:intergenic 20.0%
!! ACAATTAACATTATGTACAT+TGG - chr2.4:76627283-76627302 MS.gene072102:intron 20.0%
!! ACTACAATTATATATTTCTC+TGG - chr2.4:76625420-76625439 MS.gene072102:intron 20.0%
!! CTACAATTATATATTTCTCT+GGG - chr2.4:76625421-76625440 MS.gene072102:intron 20.0%
!! GGAAGTAATTAGAAATAAAA+TGG + chr2.4:76624565-76624584 None:intergenic 20.0%
!! GTAGAACTAGAATATAATTA+AGG + chr2.4:76624118-76624137 None:intergenic 20.0%
!! TAACATCACAAATGATATAA+CGG + chr2.4:76626987-76627006 None:intergenic 20.0%
!! TATCTATTGTTAAAGAAGAA+GGG - chr2.4:76626307-76626326 MS.gene072102:intron 20.0%
!! TATTAAGTAAATTAGTCACT+AGG - chr2.4:76626001-76626020 MS.gene072102:intron 20.0%
!! TATTATAAGTTTAAAGGTAG+TGG - chr2.4:76626882-76626901 MS.gene072102:intron 20.0%
!! TCGAGAGATAAATTATTTAA+GGG + chr2.4:76626746-76626765 None:intergenic 20.0%
!! TTATATTTAGTAACAGACAA+TGG + chr2.4:76627315-76627334 None:intergenic 20.0%
!! TTATCTATTGTTAAAGAAGA+AGG - chr2.4:76626306-76626325 MS.gene072102:intron 20.0%
!!! AAATTTACTTGTGTTTTAAG+TGG - chr2.4:76627939-76627958 MS.gene072102:CDS 20.0%
!!! ACTAAATATAAAGCTCATTT+TGG - chr2.4:76627324-76627343 MS.gene072102:intron 20.0%
!!! AGAAGGTATTATAAGTTTAA+AGG - chr2.4:76626876-76626895 MS.gene072102:intron 20.0%
!!! AGCTTTTTGTCTATAAATTA+GGG - chr2.4:76624910-76624929 MS.gene072102:intron 20.0%
!!! ATCTTTTTGTAATTTGAGAT+GGG + chr2.4:76627375-76627394 None:intergenic 20.0%
!!! ATTTTTTGGTTATTCAAGTA+AGG - chr2.4:76627254-76627273 MS.gene072102:intron 20.0%
!!! CTAAATATAAAGCTCATTTT+GGG - chr2.4:76627325-76627344 MS.gene072102:intron 20.0%
!!! GTAGATTCTTTGTTTATTAA+AGG + chr2.4:76628097-76628116 None:intergenic 20.0%
!!! TAAATATAAAGCTCATTTTG+GGG - chr2.4:76627326-76627345 MS.gene072102:intron 20.0%
!!! TATTGTCTTTTCTATTTTTC+TGG - chr2.4:76626175-76626194 MS.gene072102:intron 20.0%
!!! TTAACAAAGCTTTTGTATAT+TGG - chr2.4:76627974-76627993 MS.gene072102:CDS 20.0%
! AAAAAGTGATTACTATCACT+AGG + chr2.4:76627877-76627896 None:intergenic 25.0%
! AAATAGCCAACAAATTCAAT+GGG + chr2.4:76625014-76625033 None:intergenic 25.0%
! AACATAACTATAAACCCTAT+GGG - chr2.4:76625711-76625730 MS.gene072102:intron 25.0%
! AATATATGTACACAGTCTAA+CGG - chr2.4:76626568-76626587 MS.gene072102:intron 25.0%
! AATCAACAAATCAAAACATG+GGG + chr2.4:76626272-76626291 None:intergenic 25.0%
! ACATATAACATGAACTAATG+CGG - chr2.4:76625580-76625599 MS.gene072102:intron 25.0%
! AGTTAAAAAGAAAATCACAC+AGG + chr2.4:76626964-76626983 None:intergenic 25.0%
! ATATAACTTGAAAACTGACA+AGG + chr2.4:76626543-76626562 None:intergenic 25.0%
! ATCATAAGCATACTTACTTT+AGG + chr2.4:76628043-76628062 None:intergenic 25.0%
! ATGTCATCAATTGAAAAAAG+AGG + chr2.4:76624964-76624983 None:intergenic 25.0%
! CATACACTACAAATATATAG+AGG + chr2.4:76626100-76626119 None:intergenic 25.0%
! GTCGAGAGATAAATTATTTA+AGG + chr2.4:76626747-76626766 None:intergenic 25.0%
! TAAACAAAGAATCTACTACA+TGG - chr2.4:76628101-76628120 MS.gene072102:intron 25.0%
! TAACATAACTATAAACCCTA+TGG - chr2.4:76625710-76625729 MS.gene072102:intron 25.0%
! TTATAGTTATGTTATGTGCA+AGG + chr2.4:76625704-76625723 None:intergenic 25.0%
! TTCTTGCAAGTTAAAACAAA+AGG - chr2.4:76627445-76627464 MS.gene072102:intron 25.0%
!! AAGTAACTTGTATTACAGAT+GGG - chr2.4:76627031-76627050 MS.gene072102:CDS 25.0%
!! AATTCTTTGTTTCAGATTGT+TGG - chr2.4:76625866-76625885 MS.gene072102:CDS 25.0%
!! ATATTGAAATGCAGGTTTTT+GGG - chr2.4:76628146-76628165 MS.gene072102:intron 25.0%
!! CAGCTTTTTGTCTATAAATT+AGG - chr2.4:76624909-76624928 MS.gene072102:intron 25.0%
!! GATCTTTTTGTAATTTGAGA+TGG + chr2.4:76627376-76627395 None:intergenic 25.0%
!! TAAGTAACTTGTATTACAGA+TGG - chr2.4:76627030-76627049 MS.gene072102:CDS 25.0%
!! TATATTGAAATGCAGGTTTT+TGG - chr2.4:76628145-76628164 MS.gene072102:intron 25.0%
!! TGTTGATAAAATCGTCAAAA+AGG - chr2.4:76625059-76625078 MS.gene072102:intron 25.0%
!!! ATGCAAGGTTTGTTATATTT+GGG - chr2.4:76624526-76624545 MS.gene072102:CDS 25.0%
!!! CAAGATTTTTTAGAAAACAC+TGG + chr2.4:76627071-76627090 None:intergenic 25.0%
!!! CAGTGTTTTCTAAAAAATCT+TGG - chr2.4:76627069-76627088 MS.gene072102:CDS 25.0%
!!! GTTTTGATTTGTTGATTTTC+TGG - chr2.4:76626275-76626294 MS.gene072102:intron 25.0%
AAAAATCTTGGCAATGTGTA+TGG - chr2.4:76627081-76627100 MS.gene072102:intron 30.0%
AAATCAAGGAAAGAAGAATG+AGG + chr2.4:76624302-76624321 None:intergenic 30.0%
AACCAAATAATGATGATCTG+AGG + chr2.4:76624046-76624065 None:intergenic 30.0%
AACCTTGCATGCATTATAAT+TGG + chr2.4:76624516-76624535 None:intergenic 30.0%
AATTCTCTCTATCATGACAT+AGG - chr2.4:76625357-76625376 MS.gene072102:CDS 30.0%
AATTTATCCATCAATGGTGT+TGG + chr2.4:76625639-76625658 None:intergenic 30.0%
ATATCTAAATCCTTCCAGTA+TGG - chr2.4:76627625-76627644 MS.gene072102:intron 30.0%
ATCCAATTATAATGCATGCA+AGG - chr2.4:76624511-76624530 MS.gene072102:CDS 30.0%
ATTTATAGCAGACACATGTA+TGG + chr2.4:76625250-76625269 None:intergenic 30.0%
CAAAAAATAGGTTGTTCCTT+TGG - chr2.4:76624271-76624290 MS.gene072102:intron 30.0%
CTGCTATAAATCAAACGAAA+TGG - chr2.4:76625259-76625278 MS.gene072102:intron 30.0%
GAAATAGCCAACAAATTCAA+TGG + chr2.4:76625015-76625034 None:intergenic 30.0%
GCAAGTGAAAATTACAATGT+CGG + chr2.4:76625766-76625785 None:intergenic 30.0%
TAATTGGATGTTGTTGTATC+CGG + chr2.4:76624500-76624519 None:intergenic 30.0%
TCATCATCTGTGTAGAAAAA+AGG + chr2.4:76626239-76626258 None:intergenic 30.0%
TCTATCACTATCATCTCTAT+GGG + chr2.4:76628020-76628039 None:intergenic 30.0%
TTTGAGAACGTTATATGACA+TGG - chr2.4:76627182-76627201 MS.gene072102:CDS 30.0%
TTTGTTTCAGATTGTTGGAA+TGG - chr2.4:76625871-76625890 MS.gene072102:CDS 30.0%
! ATCAAGTATTTGTTTCTCCT+TGG - chr2.4:76624809-76624828 MS.gene072102:intron 30.0%
! ATTCTTCTTTCCTTGATTTG+CGG - chr2.4:76624303-76624322 MS.gene072102:intron 30.0%
! GTTTCTAGGGAAATAAAAAG+AGG + chr2.4:76624611-76624630 None:intergenic 30.0%
! TAATTTTCACTTGCAAAACC+AGG - chr2.4:76625772-76625791 MS.gene072102:intron 30.0%
! TGATGTATTTCTGATTTACC+AGG + chr2.4:76626360-76626379 None:intergenic 30.0%
!! AATTTGTTGGCTATTTCAGT+AGG - chr2.4:76625018-76625037 MS.gene072102:intron 30.0%
!! ATAAGTTTAAAGGTAGTGGA+AGG - chr2.4:76626886-76626905 MS.gene072102:intron 30.0%
!! CATGCAAGGTTTGTTATATT+TGG - chr2.4:76624525-76624544 MS.gene072102:CDS 30.0%
!! TCATTAATAGAGTACTGCAT+TGG + chr2.4:76626501-76626520 None:intergenic 30.0%
!! TGCAAGGTTTGTTATATTTG+GGG - chr2.4:76624527-76624546 MS.gene072102:CDS 30.0%
!! TTATATATTTCTCTGGGATG+AGG - chr2.4:76625427-76625446 MS.gene072102:intron 30.0%
!! TTTTCATTATGATGGCTTTG+TGG - chr2.4:76625191-76625210 MS.gene072102:intron 30.0%
!!! AACAACCTATTTTTTGGATC+CGG + chr2.4:76624267-76624286 None:intergenic 30.0%
!!! CAAAGGAACAACCTATTTTT+TGG + chr2.4:76624273-76624292 None:intergenic 30.0%
!!! GATTTGTTGATTTTCTGGTT+AGG - chr2.4:76626280-76626299 MS.gene072102:intron 30.0%
!!! GTGATGCTTTTTCATTATGA+TGG - chr2.4:76625183-76625202 MS.gene072102:CDS 30.0%
!!! TTTTCGAGTTGGTAACATTT+TGG - chr2.4:76625740-76625759 MS.gene072102:intron 30.0%
AAAGGACCTAAAGGTGAAAA+TGG + chr2.4:76626221-76626240 None:intergenic 35.0%
AATGAAAAATGTAGGTGTGG+TGG - chr2.4:76627682-76627701 MS.gene072102:intron 35.0%
AATTTCTTTGTTAAGCTCGC+GGG - chr2.4:76625660-76625679 MS.gene072102:intron 35.0%
ACCATGCAGAATCGAAATAT+TGG + chr2.4:76627476-76627495 None:intergenic 35.0%
AGACAAGACATGCAATAGAA+TGG + chr2.4:76624091-76624110 None:intergenic 35.0%
AGAGAATTAGCTAGAGGTAA+TGG + chr2.4:76624587-76624606 None:intergenic 35.0%
ATAATTTATCTCTCGACTCC+TGG - chr2.4:76626750-76626769 MS.gene072102:intron 35.0%
ATATACCTTGTCTCTAAACG+CGG - chr2.4:76627798-76627817 MS.gene072102:intron 35.0%
ATCACAACAAAATCACCTGA+CGG + chr2.4:76625168-76625187 None:intergenic 35.0%
ATGAATGAGTATACATTCCC+AGG + chr2.4:76626771-76626790 None:intergenic 35.0%
ATGGAAAGATGCAGCAAAAA+AGG - chr2.4:76628174-76628193 MS.gene072102:intron 35.0%
ATGGATGGAAGAATTTAGCT+TGG - chr2.4:76625214-76625233 MS.gene072102:intron 35.0%
ATTAGAGCATGAAGTGAAGT+TGG + chr2.4:76624751-76624770 None:intergenic 35.0%
ATTTAGATATGCCACGAACA+TGG + chr2.4:76627615-76627634 None:intergenic 35.0%
CAGTCTTACAAGCAAACTTA+TGG - chr2.4:76626070-76626089 MS.gene072102:intron 35.0%
CATATGGATCAATCCAACAT+TGG + chr2.4:76628201-76628220 None:intergenic 35.0%
CATCTCTCAGCAATATTTCA+GGG - chr2.4:76627653-76627672 MS.gene072102:intron 35.0%
CTCCTCAGATCATCATTATT+TGG - chr2.4:76624041-76624060 MS.gene072102:CDS 35.0%
GAATCTGCATATCAGATTAC+TGG + chr2.4:76624849-76624868 None:intergenic 35.0%
GAATTTCTTTGTTAAGCTCG+CGG - chr2.4:76625659-76625678 MS.gene072102:intron 35.0%
GAGAATTAGCTAGAGGTAAT+GGG + chr2.4:76624586-76624605 None:intergenic 35.0%
GGGACTAATTTATTCAATGC+CGG - chr2.4:76624478-76624497 MS.gene072102:intron 35.0%
GGTCAAAATTATCGACAAGA+AGG + chr2.4:76625454-76625473 None:intergenic 35.0%
GGTGATCGAATGAAAAATGT+AGG - chr2.4:76627674-76627693 MS.gene072102:intron 35.0%
GTCTATCACTATCATCTCTA+TGG + chr2.4:76628021-76628040 None:intergenic 35.0%
GTGTAGAAAAAAGGACCTAA+AGG + chr2.4:76626230-76626249 None:intergenic 35.0%
TAAGCAGCGCTATCTAATTA+TGG + chr2.4:76625979-76625998 None:intergenic 35.0%
TAATTTATCTCTCGACTCCT+GGG - chr2.4:76626751-76626770 MS.gene072102:intron 35.0%
TCATCTCTCAGCAATATTTC+AGG - chr2.4:76627652-76627671 MS.gene072102:intron 35.0%
TCCAATATTTCGATTCTGCA+TGG - chr2.4:76627472-76627491 MS.gene072102:intron 35.0%
TCGAATGAAAAATGTAGGTG+TGG - chr2.4:76627679-76627698 MS.gene072102:intron 35.0%
TCTAAACGCGGTACATAAAA+TGG - chr2.4:76627810-76627829 MS.gene072102:intron 35.0%
TCTGAGTACATAGTTCATCT+TGG - chr2.4:76627707-76627726 MS.gene072102:intron 35.0%
TCTTTCCGGATCCAAAAAAT+AGG - chr2.4:76624259-76624278 MS.gene072102:intron 35.0%
TGATCCATATGAACAACAAC+AGG - chr2.4:76628210-76628229 MS.gene072102:intron 35.0%
TGGTTCAAGATTAAACTCCA+AGG + chr2.4:76624829-76624848 None:intergenic 35.0%
TTATTCACCAACACCATTGA+TGG - chr2.4:76625629-76625648 MS.gene072102:intron 35.0%
TTGAGATGGGACTATATGTA+GGG + chr2.4:76627362-76627381 None:intergenic 35.0%
! GTAACAATTGAGTGTTGCAA+AGG + chr2.4:76625539-76625558 None:intergenic 35.0%
! TAACTTGTATTACAGATGGG+TGG - chr2.4:76627034-76627053 MS.gene072102:CDS 35.0%
! TGAACTAATGCGGATCTTTT+TGG - chr2.4:76625590-76625609 MS.gene072102:intron 35.0%
! TTCAATTGATGACATCTACC+TGG - chr2.4:76624969-76624988 MS.gene072102:intron 35.0%
! TTTGAGATGGGACTATATGT+AGG + chr2.4:76627363-76627382 None:intergenic 35.0%
! TTTGCCTGTTGTTGTTCATA+TGG + chr2.4:76628217-76628236 None:intergenic 35.0%
!! AATAGAGTACTGCATTGGTT+GGG + chr2.4:76626496-76626515 None:intergenic 35.0%
!! AATTTTGACCCGAAAAGGTA+AGG - chr2.4:76625464-76625483 MS.gene072102:intron 35.0%
!! ATGGTGTTGGTGAATAAACA+TGG + chr2.4:76625626-76625645 None:intergenic 35.0%
!! GCAAGGTTTGTTATATTTGG+GGG - chr2.4:76624528-76624547 MS.gene072102:CDS 35.0%
!! GTTTTCTTTTTTGCAGAGAC+TGG - chr2.4:76624448-76624467 MS.gene072102:intron 35.0%
!! TAATAGAGTACTGCATTGGT+TGG + chr2.4:76626497-76626516 None:intergenic 35.0%
!! TCGATAATTTTGACCCGAAA+AGG - chr2.4:76625459-76625478 MS.gene072102:intron 35.0%
!! TTGCTTTTCTTATCCATACC+TGG + chr2.4:76627115-76627134 None:intergenic 35.0%
!!! GCTTTTGTATATTGGTTTGC+AGG - chr2.4:76627982-76628001 MS.gene072102:CDS 35.0%
!!! GTTAATTTGTTTTCCCTCTG+TGG - chr2.4:76625298-76625317 MS.gene072102:intron 35.0%
AATGACTTAATCCATGCCTG+GGG - chr2.4:76627536-76627555 MS.gene072102:CDS 40.0%
ACAACTTGGTTATTGTGCAC+AGG - chr2.4:76627568-76627587 MS.gene072102:CDS 40.0%
ACTCGAAAAAGACATCCCAT+AGG + chr2.4:76625729-76625748 None:intergenic 40.0%
AGAATCTACTACATGGTTGC+AGG - chr2.4:76628108-76628127 MS.gene072102:intron 40.0%
AGAATGACTTAATCCATGCC+TGG - chr2.4:76627534-76627553 MS.gene072102:CDS 40.0%
AGACATGCAATAGAATGGTC+TGG + chr2.4:76624086-76624105 None:intergenic 40.0%
AGAGGAAGAGAATTAGCTAG+AGG + chr2.4:76624593-76624612 None:intergenic 40.0%
AGATGAACAACCATACTGGA+AGG + chr2.4:76627638-76627657 None:intergenic 40.0%
ATCTGAGGAGAACGAACTTA+CGG + chr2.4:76624031-76624050 None:intergenic 40.0%
ATGTGTATGGCATATGATCC+AGG - chr2.4:76627094-76627113 MS.gene072102:intron 40.0%
CAGCAAAAAAGGACCAATGT+TGG - chr2.4:76628185-76628204 MS.gene072102:intron 40.0%
CTCGAAAAAGACATCCCATA+GGG + chr2.4:76625728-76625747 None:intergenic 40.0%
GAACCACCCATTGAATTTGT+TGG - chr2.4:76625005-76625024 MS.gene072102:intron 40.0%
GAATGACTTAATCCATGCCT+GGG - chr2.4:76627535-76627554 MS.gene072102:CDS 40.0%
GCAGTCGTATATTGAAATGC+AGG - chr2.4:76628138-76628157 MS.gene072102:intron 40.0%
GTGTTATAACACCATGTTCG+TGG - chr2.4:76627601-76627620 MS.gene072102:CDS 40.0%
GTTTAGCAACAGCACTCATT+CGG - chr2.4:76626448-76626467 MS.gene072102:intron 40.0%
TAGCCAACAAATTCAATGGG+TGG + chr2.4:76625011-76625030 None:intergenic 40.0%
TATGGCATATGATCCAGGTA+TGG - chr2.4:76627099-76627118 MS.gene072102:intron 40.0%
TCACAACAAAATCACCTGAC+GGG + chr2.4:76625167-76625186 None:intergenic 40.0%
TCTCTCTATCATGACATAGG+TGG - chr2.4:76625360-76625379 MS.gene072102:CDS 40.0%
TGAGAGATGAACAACCATAC+TGG + chr2.4:76627642-76627661 None:intergenic 40.0%
TTACAGATGGGTGGAAATGA+TGG - chr2.4:76627043-76627062 MS.gene072102:CDS 40.0%
TTATGCTGTCTCTGTACAGA+AGG - chr2.4:76626859-76626878 MS.gene072102:CDS 40.0%
TTGTAGTCAGCAACTATGTC+TGG + chr2.4:76625407-76625426 None:intergenic 40.0%
TTGTTATATTTGGGGGTAGG+AGG - chr2.4:76624535-76624554 MS.gene072102:CDS 40.0%
! AAAATAAGCGCCGCAAATCA+AGG + chr2.4:76624316-76624335 None:intergenic 40.0%
! AAGCAGGATCAAAAGTACAC+AGG - chr2.4:76626397-76626416 MS.gene072102:intron 40.0%
! GGCAAATCAGACTAGTCATT+AGG - chr2.4:76628231-76628250 MS.gene072102:CDS 40.0%
! TCTCCACCATTTTCACCTTT+AGG - chr2.4:76626212-76626231 MS.gene072102:intron 40.0%
!! ATTTGCGGCGCTTATTTTCT+TGG - chr2.4:76624318-76624337 MS.gene072102:intron 40.0%
!! CATTATGATGGCTTTGTGGA+TGG - chr2.4:76625195-76625214 MS.gene072102:intron 40.0%
!! GGTTTGTTATATTTGGGGGT+AGG - chr2.4:76624532-76624551 MS.gene072102:CDS 40.0%
!! TGCAGGTTTTTGGGAAAAGA+TGG - chr2.4:76628155-76628174 MS.gene072102:intron 40.0%
!!! ATGGGATGTCTTTTTCGAGT+TGG - chr2.4:76625729-76625748 MS.gene072102:intron 40.0%
ACACCAGAGTAGTCCCATAA+GGG + chr2.4:76624705-76624724 None:intergenic 45.0%
ACTGTTTACCCTAAGCAAGG+AGG + chr2.4:76626933-76626952 None:intergenic 45.0%
ATAGGAGTAGATGACCACAG+AGG + chr2.4:76625315-76625334 None:intergenic 45.0%
ATCTGCTGTCATGTCATGTC+AGG - chr2.4:76624230-76624249 MS.gene072102:CDS 45.0%
ATGTACCGCGTTTAGAGACA+AGG + chr2.4:76627806-76627825 None:intergenic 45.0%
CCACTGACAGTTCATAAAGC+AGG - chr2.4:76626381-76626400 MS.gene072102:intron 45.0%
CCTGCTTTATGAACTGTCAG+TGG + chr2.4:76626384-76626403 None:intergenic 45.0%
GCAACTGTTTACCCTAAGCA+AGG + chr2.4:76626936-76626955 None:intergenic 45.0%
GGACCTAAAGGTGAAAATGG+TGG + chr2.4:76626218-76626237 None:intergenic 45.0%
GGACCTCTAACTTGGAAACA+CGG - chr2.4:76624679-76624698 MS.gene072102:CDS 45.0%
GGTTCGAAATTCTCTGAACC+AGG + chr2.4:76624990-76625009 None:intergenic 45.0%
GTCCTAGCAACAATTCCTTG+AGG + chr2.4:76624663-76624682 None:intergenic 45.0%
GTTGCTAAACAGCTAGAGGT+GGG + chr2.4:76626438-76626457 None:intergenic 45.0%
TACACCAGAGTAGTCCCATA+AGG + chr2.4:76624706-76624725 None:intergenic 45.0%
TAGGAGTAGATGACCACAGA+GGG + chr2.4:76625314-76625333 None:intergenic 45.0%
TCTGCTGTCATGTCATGTCA+GGG - chr2.4:76624231-76624250 MS.gene072102:CDS 45.0%
TGCAATAGAATGGTCTGGTC+TGG + chr2.4:76624081-76624100 None:intergenic 45.0%
TGCCTCAAGGAATTGTTGCT+AGG - chr2.4:76624658-76624677 MS.gene072102:intron 45.0%
TGCTGTTGCTAAACAGCTAG+AGG + chr2.4:76626442-76626461 None:intergenic 45.0%
TGGCAATGCATTCTCTGCAA+AGG - chr2.4:76624338-76624357 MS.gene072102:intron 45.0%
TGTTGCTAAACAGCTAGAGG+TGG + chr2.4:76626439-76626458 None:intergenic 45.0%
TGTTGCTAGGACCTCTAACT+TGG - chr2.4:76624671-76624690 MS.gene072102:CDS 45.0%
TTCACTTGCAAAACCAGGTG+TGG - chr2.4:76625777-76625796 MS.gene072102:intron 45.0%
! CACAAGTGCCTTACCTTTTC+GGG + chr2.4:76625475-76625494 None:intergenic 45.0%
! GCACAAGTGCCTTACCTTTT+CGG + chr2.4:76625476-76625495 None:intergenic 45.0%
!! ATGATGGCTTTGTGGATGGA+TGG - chr2.4:76625199-76625218 MS.gene072102:intron 45.0%
!! ATGTCAGGGTGTTGTCTTTC+CGG - chr2.4:76624245-76624264 MS.gene072102:intron 45.0%
!! GAAGAATGAGGAGTGTCCAA+AGG + chr2.4:76624290-76624309 None:intergenic 45.0%
!! GCATTGGTTGGGTCATAACA+AGG + chr2.4:76626485-76626504 None:intergenic 45.0%
!!! AATTAATTAATTTTATTTTG+GGG - chr2.4:76624179-76624198 MS.gene072102:intron 5.0%
!!! CAATTAATTAATTTTATTTT+GGG - chr2.4:76624178-76624197 MS.gene072102:intron 5.0%
!!! TCAATTAATTAATTTTATTT+TGG - chr2.4:76624177-76624196 MS.gene072102:intron 5.0%
!!! TTTGTAAAAAATATTTTTTT+TGG + chr2.4:76627398-76627417 None:intergenic 5.0%
ACTTGGAAACACGGCCCTTA+TGG - chr2.4:76624688-76624707 MS.gene072102:CDS 50.0%
AGAGATATCACAGCCTGCAC+TGG - chr2.4:76626332-76626351 MS.gene072102:intron 50.0%
CGGGGGATCTAATGGAAATG+AGG - chr2.4:76627742-76627761 MS.gene072102:CDS 50.0%
CTACTACATGGTTGCAGGTG+AGG - chr2.4:76628113-76628132 MS.gene072102:intron 50.0%
CTTGGAAACACGGCCCTTAT+GGG - chr2.4:76624689-76624708 MS.gene072102:CDS 50.0%
GATTTACCAGGATCCAGTGC+AGG + chr2.4:76626348-76626367 None:intergenic 50.0%
GCAATGCCTGAGTTCCAGAA+GGG + chr2.4:76624641-76624660 None:intergenic 50.0%
TAGAAACAATGCCGCCCTTC+TGG - chr2.4:76624624-76624643 MS.gene072102:intron 50.0%
TTACCCTAAGCAAGGAGGAG+CGG + chr2.4:76626928-76626947 None:intergenic 50.0%
TTGCAAAACCAGGTGTGGCA+AGG - chr2.4:76625782-76625801 MS.gene072102:intron 50.0%
TTTGCAGAGACTGGCACGAT+GGG - chr2.4:76624457-76624476 MS.gene072102:intron 50.0%
! AGAAGGGCGGCATTGTTTCT+AGG + chr2.4:76624625-76624644 None:intergenic 50.0%
! TTTTGCAGAGACTGGCACGA+TGG - chr2.4:76624456-76624475 MS.gene072102:intron 50.0%
!! GAAGGGCGGCATTGTTTCTA+GGG + chr2.4:76624624-76624643 None:intergenic 50.0%
!! TATCTGCTGACTCATACCGC+CGG - chr2.4:76625133-76625152 MS.gene072102:intron 50.0%
AAGTTGTCTGTCCAGTCCCC+AGG + chr2.4:76627555-76627574 None:intergenic 55.0%
ATGCCTGAGTTCCAGAAGGG+CGG + chr2.4:76624638-76624657 None:intergenic 55.0%
CCATTAGATCCCCCGAGAGT+GGG + chr2.4:76627737-76627756 None:intergenic 55.0%
CTTAATCCATGCCTGGGGAC+TGG - chr2.4:76627541-76627560 MS.gene072102:CDS 55.0%
GCTAAACAGCTAGAGGTGGG+AGG + chr2.4:76626435-76626454 None:intergenic 55.0%
GCTAGAGGTGGGAGGAAACA+AGG + chr2.4:76626427-76626446 None:intergenic 55.0%
GGCAATGCCTGAGTTCCAGA+AGG + chr2.4:76624642-76624661 None:intergenic 55.0%
GGGCCGTGTTTCCAAGTTAG+AGG + chr2.4:76624685-76624704 None:intergenic 55.0%
TAAGCTCGCGGGCTTACAGT+TGG - chr2.4:76625671-76625690 MS.gene072102:intron 55.0%
TCCATTAGATCCCCCGAGAG+TGG + chr2.4:76627738-76627757 None:intergenic 55.0%
TGGGGACTGGACAGACAACT+TGG - chr2.4:76627554-76627573 MS.gene072102:CDS 55.0%
TTGCAGAGACTGGCACGATG+GGG - chr2.4:76624458-76624477 MS.gene072102:intron 55.0%
! GGAACTCAGGCATTGCCTCA+AGG - chr2.4:76624645-76624664 MS.gene072102:intron 55.0%
AGCACCGCTCCTCCTTGCTT+AGG - chr2.4:76626921-76626940 MS.gene072102:intron 60.0%
ATCTTGGCCTGCCCACTCTC+GGG - chr2.4:76627723-76627742 MS.gene072102:intron 60.0%
CATCTTGGCCTGCCCACTCT+CGG - chr2.4:76627722-76627741 MS.gene072102:intron 60.0%
CCAGGTGTGGCAAGGAGAGT+CGG - chr2.4:76625790-76625809 MS.gene072102:intron 60.0%
CCCACTCTCGGGGGATCTAA+TGG - chr2.4:76627734-76627753 MS.gene072102:CDS 60.0%
CGGCCCTTATGGGACTACTC+TGG - chr2.4:76624699-76624718 MS.gene072102:CDS 60.0%
GCACCGCTCCTCCTTGCTTA+GGG - chr2.4:76626922-76626941 MS.gene072102:intron 60.0%
TCACAGCCTGCACTGGATCC+TGG - chr2.4:76626339-76626358 MS.gene072102:intron 60.0%
!! ATGCCGCCCTTCTGGAACTC+AGG - chr2.4:76624632-76624651 MS.gene072102:intron 60.0%
CACCTGACGGGAACTGCCAC+CGG + chr2.4:76625155-76625174 None:intergenic 65.0%
CCGACTCTCCTTGCCACACC+TGG + chr2.4:76625793-76625812 None:intergenic 65.0%
GTCTGTCCAGTCCCCAGGCA+TGG + chr2.4:76627550-76627569 None:intergenic 65.0%
TAGATCCCCCGAGAGTGGGC+AGG + chr2.4:76627733-76627752 None:intergenic 65.0%
TCTTGGCCTGCCCACTCTCG+GGG - chr2.4:76627724-76627743 MS.gene072102:intron 65.0%
!! CTGCTGACTCATACCGCCGG+TGG - chr2.4:76625136-76625155 MS.gene072102:intron 65.0%
CTGACGGGAACTGCCACCGG+CGG + chr2.4:76625152-76625171 None:intergenic 70.0%
CTTGGCCTGCCCACTCTCGG+GGG - chr2.4:76627725-76627744 MS.gene072102:intron 70.0%
CGCCGGTGGCAGTTCCCGTC+AGG - chr2.4:76625150-76625169 MS.gene072102:CDS 75.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 76624006 76628252 76624006 ID=MS.gene072102
chr2.4 mRNA 76624006 76628252 76624006 ID=MS.gene072102.t1;Parent=MS.gene072102
chr2.4 exon 76628229 76628252 76628229 ID=MS.gene072102.t1.exon1;Parent=MS.gene072102.t1
chr2.4 CDS 76628229 76628252 76628229 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76627887 76628006 76627887 ID=MS.gene072102.t1.exon2;Parent=MS.gene072102.t1
chr2.4 CDS 76627887 76628006 76627887 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76627726 76627794 76627726 ID=MS.gene072102.t1.exon3;Parent=MS.gene072102.t1
chr2.4 CDS 76627726 76627794 76627726 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76627527 76627631 76627527 ID=MS.gene072102.t1.exon4;Parent=MS.gene072102.t1
chr2.4 CDS 76627527 76627631 76627527 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76627178 76627261 76627178 ID=MS.gene072102.t1.exon5;Parent=MS.gene072102.t1
chr2.4 CDS 76627178 76627261 76627178 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76626978 76627096 76626978 ID=MS.gene072102.t1.exon6;Parent=MS.gene072102.t1
chr2.4 CDS 76626978 76627096 76626978 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76626778 76626879 76626778 ID=MS.gene072102.t1.exon7;Parent=MS.gene072102.t1
chr2.4 CDS 76626778 76626879 76626778 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76625840 76625956 76625840 ID=MS.gene072102.t1.exon8;Parent=MS.gene072102.t1
chr2.4 CDS 76625840 76625956 76625840 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76625315 76625380 76625315 ID=MS.gene072102.t1.exon9;Parent=MS.gene072102.t1
chr2.4 CDS 76625315 76625380 76625315 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76625143 76625209 76625143 ID=MS.gene072102.t1.exon10;Parent=MS.gene072102.t1
chr2.4 CDS 76625143 76625209 76625143 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76624669 76624722 76624669 ID=MS.gene072102.t1.exon11;Parent=MS.gene072102.t1
chr2.4 CDS 76624669 76624722 76624669 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76624495 76624584 76624495 ID=MS.gene072102.t1.exon12;Parent=MS.gene072102.t1
chr2.4 CDS 76624495 76624584 76624495 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76624213 76624254 76624213 ID=MS.gene072102.t1.exon13;Parent=MS.gene072102.t1
chr2.4 CDS 76624213 76624254 76624213 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
chr2.4 exon 76624006 76624128 76624006 ID=MS.gene072102.t1.exon14;Parent=MS.gene072102.t1
chr2.4 CDS 76624006 76624128 76624006 ID=cds.MS.gene072102.t1;Parent=MS.gene072102.t1
Gene Sequence

>MS.gene072102

ATGAAGCTTTTTAATTCTGTAACCGTAAGTTCGTTCTCCTCAGATCATCATTATTTGGTTGACTAGACTAGACCAGACCAGACCATTCTATTGCATGTCTTGTCTTGCTCCTTAATTATATTCTAGTTCTACTATGAATGAATCACAATATTATTTTTGCTTGCTGCTTTTTCAATTAATTAATTTTATTTTGGGGCAATTTCATTTCATTTATCAACTAATTCATCTGCTGTCATGTCATGTCAGGGTGTTGTCTTTCCGGATCCAAAAAATAGGTTGTTCCTTTGGACACTCCTCATTCTTCTTTCCTTGATTTGCGGCGCTTATTTTCTTGGCAATGCATTCTCTGCAAAGGAGTACAAACAAGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATTAACACACTTTCTCAAATTCATTCATTCATTCACTAGTTTTCTTTTTTGCAGAGACTGGCACGATGGGGACTAATTTATTCAATGCCGGATACAACAACATCCAATTATAATGCATGCAAGGTTTGTTATATTTGGGGGTAGGAGGATATCCATTTTATTTCTAATTACTTCCCATTACCTCTAGCTAATTCTCTTCCTCTTTTTATTTCCCTAGAAACAATGCCGCCCTTCTGGAACTCAGGCATTGCCTCAAGGAATTGTTGCTAGGACCTCTAACTTGGAAACACGGCCCTTATGGGACTACTCTGGTGTAAATAATGTATGCTAAATTCTAACCAACTTCACTTCATGCTCTAATACCGTTAATGTTAAGCTCAAATTTATAAACTGTTATCAATCAAGTATTTGTTTCTCCTTGGAGTTTAATCTTGAACCAGTAATCTGATATGCAGATTCAAATTTCAACTCTATATCTTACATAATATGTTACTTTCAACAGCTTTTTGTCTATAAATTAGGGACTATATTTGTGCAATGTTCATTAATTTCCTCTTTTTTCAATTGATGACATCTACCTGGTTCAGAGAATTTCGAACCACCCATTGAATTTGTTGGCTATTTCAGTAGGAGTTAAGCAAAAAGAAGTTGTTGATAAAATCGTCAAAAAGGTGACTGTTGCTTCACTTATATAATTTGACTTTGATCTAAAGTCTAAACTCATATCTGCTGACTCATACCGCCGGTGGCAGTTCCCGTCAGGTGATTTTGTTGTGATGCTTTTTCATTATGATGGCTTTGTGGATGGATGGAAGAATTTAGCTTGGAGTAATCGTGCCATACATGTGTCTGCTATAAATCAAACGAAATGGTATAATAAGCTCATATGTTAATTTGTTTTCCCTCTGTGGTCATCTACTCCTATATCTGTAAATATTAAACAAATAAATTCTCTCTATCATGACATAGGTGGTTTGCAAAACGATTTTTGCATCCAGACATAGTTGCTGACTACAATTATATATTTCTCTGGGATGAGGACCTTCTTGTCGATAATTTTGACCCGAAAAGGTAAGGCACTTGTGCATGTCTTGTTAAATTTAGAATTTTCATTTTTGTAGATATACCTTTGCAACACTCAATTGTTACTTTTTTTTATGTGAATTGTGTACATATAACATGAACTAATGCGGATCTTTTTGGTTAAAGAATTCCATGTTTATTCACCAACACCATTGATGGATAAATTGAATTTCTTTGTTAAGCTCGCGGGCTTACAGTTGGTTGCAGACCTTGCACATAACATAACTATAAACCCTATGGGATGTCTTTTTCGAGTTGGTAACATTTTGGCCGACATTGTAATTTTCACTTGCAAAACCAGGTGTGGCAAGGAGAGTCGGATCATAATACTAAATTAAAGTTTTTAGTTGAATATATTTGATATGTTGTTACTAATTCTTTGTTTCAGATTGTTGGAATGGAGATTGAGATTTTTCTGTTGTATTAATTATTTTTTGCTGCTTATTTCTGTAAAAATTAGATTGTTGCTTGTTTAAGTAAGTGCCATAATTAGATAGCGCTGCTTATTTATTAAGTAAATTAGTCACTAGGTAATGACGACTAGTGTTTAGAGTAGATTTATTGCAGATTTTATTTTCAGTCTTACAAGCAAACTTATGGCTTGCCTCTATATATTTGTAGTGTATGCTTCAGTTTAATGTATTAAAGTATGTTAGTATTTTTACTTTGTTCTCGAAAATTTTATTGTCTTTTCTATTTTTCTGGTTTTTCTTCTTTCTTCTCCACCATTTTCACCTTTAGGTCCTTTTTTCTACACAGATGATGATTATTTTATGCCCCATGTTTTGATTTGTTGATTTTCTGGTTAGGTATTTATCTATTGTTAAAGAAGAAGGGCTAGAGATATCACAGCCTGCACTGGATCCTGGTAAATCAGAAATACATCATCCACTGACAGTTCATAAAGCAGGATCAAAAGTACACAGGTTAACCTTGTTTCCTCCCACCTCTAGCTGTTTAGCAACAGCACTCATTCGGTTGATCTACATCCTTGTTATGACCCAACCAATGCAGTACTCTATTAATGAACTAGATTATTAGATTGTTCCTTGTCAGTTTTCAAGTTATATTTTAGAATATATGTACACAGTCTAACGGACATAAGAAGCATCTCTGTAAAATGCGCAAGTGTTGAAGAACATGTTGCGCAAAATCTTACTCAAACTATTTATTTTGTCAAACTTTTCATGTTTATTTAAGTGTACTTCTGCAACAAGCTTTTCTATCATTCATTCAAATAATTTACAGCTCCCTTAAATAATTTATCTCTCGACTCCTGGGAATGTATACTCATTCATTCATGTTGCATTGAATTTTTGAGTAGTTACTTTTTTTGTGCAAACATTGCTAAAATATCTTGTTTGTGTTATGCTGTCTCTGTACAGAAGGTATTATAAGTTTAAAGGTAGTGGAAGGTGTGATGACAATAGCACCGCTCCTCCTTGCTTAGGGTAAACAGTTGCACTATCCTGTGTGATTTTCTTTTTAACTCCGTTATATCATTTGTGATGTTAAATTGAATAGTTAATTTAATATGTAAGTAACTTGTATTACAGATGGGTGGAAATGATGGCACCAGTGTTTTCTAAAAAATCTTGGCAATGTGTATGGCATATGATCCAGGTATGGATAAGAAAAGCAAAGTCAACTTAGTACTAAACCAGTGAAAATTAAGATAAATTATTTCTGTTTGAGAACGTTATATGACATGGAATGACAGTTTCTGTATGTGTGTGTCTCTCATAATAGAATTTTTTTGACATTTTTTGGTTATTCAAGTAAGGTTGTTAACAATTAACATTATGTACATTGGAAGAAACCATTGTCTGTTACTAAATATAAAGCTCATTTTGGGGAAAAATGTGTCCCTACATATAGTCCCATCTCAAATTACAAAAAGATCCAAAAAAAATATTTTTTACAAAATTTTACTAATTCATATATTTTTTTTCTTCTTGCAAGTTAAAACAAAAGGCTTGTCCAATATTTCGATTCTGCATGGTATCTTTACTCATCTTCGTCTACTCATCTTTTTATCTGCAGAATGACTTAATCCATGCCTGGGGACTGGACAGACAACTTGGTTATTGTGCACAGGTAACTTGCTTGTGTTATAACACCATGTTCGTGGCATATCTAAATCCTTCCAGTATGGTTGTTCATCTCTCAGCAATATTTCAGGGTGATCGAATGAAAAATGTAGGTGTGGTGGATTCTGAGTACATAGTTCATCTTGGCCTGCCCACTCTCGGGGGATCTAATGGAAATGAGGCAAGTGATTTCATTTTTTATGTCAAACGACAGTATATACCTTGTCTCTAAACGCGGTACATAAAATGGAAGATATTGAATTCACACACATTATGTTGAAGATTTATCATCCTAGTGATAGTAATCACTTTTTTAGTTAAATTTGGCAACATATCATTTGTGTGCTTATGCAGATAAATTTACTTGTGTTTTAAGTGGCAGTCGAAACTATTAACAAAGCTTTTGTATATTGGTTTGCAGGGGTCGTCAAATTCCCATAGAGATGATAGTGATAGACCTAAAGTAAGTATGCTTATGATGTATGATGTATATTTAAACACTTGTCGTAGCCCTTTAATAAACAAAGAATCTACTACATGGTTGCAGGTGAGGATGCAGTCGTATATTGAAATGCAGGTTTTTGGGAAAAGATGGAAAGATGCAGCAAAAAAGGACCAATGTTGGATTGATCCATATGAACAACAACAGGCAAATCAGACTAGTCATTAG
Protein sequence

>MS.gene072102.t1

MKLFNSVTGVVFPDPKNRLFLWTLLILLSLICGAYFLGNAFSAKEYKQRLARWGLIYSMPDTTTSNYNACKKQCRPSGTQALPQGIVARTSNLETRPLWDYSGVNNRISNHPLNLLAISVGVKQKEVVDKIVKKFPSGDFVVMLFHYDGFVDGWKNLAWSNRAIHVSAINQTKWWFAKRFLHPDIVADYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPALDPGKSEIHHPLTVHKAGSKVHRRYYKFKGSGRCDDNSTAPPCLGWVEMMAPVFSKKSWQCVWHMIQNDLIHAWGLDRQLGYCAQGDRMKNVGVVDSEYIVHLGLPTLGGSNGNEGSSNSHRDDSDRPKVRMQSYIEMQVFGKRWKDAAKKDQCWIDPYEQQQANQTSH