Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072590.t1 | XP_003626148.1 | 99.4 | 638 | 4 | 0 | 1 | 638 | 1 | 638 | 0.00E+00 | 1194.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072590.t1 | Q8BJ34 | 28.4 | 155 | 108 | 2 | 15 | 168 | 348 | 500 | 4.3e-09 | 64.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072590.t1 | G7KWF4 | 99.4 | 638 | 4 | 0 | 1 | 638 | 1 | 638 | 0.0e+00 | 1194.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049876 | MS.gene072590 | -0.80403 | 2.63E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072590.t1 | MTR_7g111570 | 99.373 | 638 | 4 | 0 | 1 | 638 | 1 | 638 | 0.0 | 1305 |
| MS.gene072590.t1 | MTR_7g110390 | 75.776 | 161 | 38 | 1 | 12 | 171 | 6 | 166 | 5.88e-78 | 256 |
| MS.gene072590.t1 | MTR_7g110390 | 50.000 | 172 | 86 | 0 | 461 | 632 | 292 | 463 | 8.49e-47 | 172 |
| MS.gene072590.t1 | MTR_3g050240 | 48.101 | 158 | 78 | 3 | 19 | 175 | 174 | 328 | 1.35e-38 | 149 |
| MS.gene072590.t1 | MTR_3g050240 | 44.667 | 150 | 79 | 2 | 17 | 164 | 8 | 155 | 2.18e-25 | 110 |
| MS.gene072590.t1 | MTR_3g095410 | 46.980 | 149 | 79 | 0 | 17 | 165 | 55 | 203 | 4.21e-38 | 152 |
| MS.gene072590.t1 | MTR_7g108660 | 41.860 | 172 | 78 | 2 | 461 | 631 | 100 | 250 | 1.74e-31 | 123 |
| MS.gene072590.t1 | MTR_1g023460 | 43.195 | 169 | 86 | 4 | 11 | 170 | 2 | 169 | 3.99e-31 | 120 |
| MS.gene072590.t1 | MTR_4g085820 | 48.246 | 114 | 57 | 2 | 19 | 130 | 48 | 161 | 1.05e-22 | 102 |
| MS.gene072590.t1 | MTR_8g011120 | 37.037 | 162 | 82 | 5 | 18 | 165 | 33 | 188 | 1.20e-20 | 96.7 |
| MS.gene072590.t1 | MTR_8g011570 | 35.443 | 158 | 82 | 4 | 22 | 165 | 35 | 186 | 1.55e-18 | 90.1 |
| MS.gene072590.t1 | MTR_7g077430 | 35.570 | 149 | 88 | 4 | 17 | 165 | 470 | 610 | 3.14e-18 | 89.7 |
| MS.gene072590.t1 | MTR_7g077430 | 38.136 | 118 | 66 | 3 | 54 | 165 | 2 | 118 | 9.96e-12 | 68.6 |
| MS.gene072590.t1 | MTR_4g098990 | 35.404 | 161 | 85 | 4 | 19 | 165 | 40 | 195 | 6.21e-18 | 87.8 |
| MS.gene072590.t1 | MTR_3g095410 | 54.688 | 64 | 29 | 0 | 102 | 165 | 1 | 64 | 4.79e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072590.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.85e-87 | 288 |
| MS.gene072590.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.85e-87 | 288 |
| MS.gene072590.t1 | AT3G62200 | 79.762 | 168 | 34 | 0 | 10 | 177 | 21 | 188 | 3.03e-87 | 286 |
| MS.gene072590.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.12e-86 | 289 |
| MS.gene072590.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 5.06e-86 | 289 |
| MS.gene072590.t1 | AT5G61190 | 69.307 | 202 | 60 | 2 | 8 | 207 | 2 | 203 | 5.66e-86 | 290 |
| MS.gene072590.t1 | AT5G61190 | 69.307 | 202 | 60 | 2 | 8 | 207 | 2 | 203 | 8.40e-86 | 289 |
| MS.gene072590.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.61e-85 | 289 |
| MS.gene072590.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.63e-85 | 289 |
| MS.gene072590.t1 | AT5G61190 | 69.307 | 202 | 60 | 2 | 8 | 207 | 2 | 203 | 1.77e-85 | 289 |
| MS.gene072590.t1 | AT3G62210 | 73.333 | 180 | 45 | 1 | 5 | 181 | 10 | 189 | 1.82e-85 | 269 |
| MS.gene072590.t1 | AT5G61180 | 60.674 | 178 | 52 | 1 | 9 | 168 | 72 | 249 | 1.22e-69 | 231 |
| MS.gene072590.t1 | AT3G61028 | 45.181 | 166 | 88 | 3 | 15 | 177 | 78 | 243 | 1.93e-43 | 157 |
| MS.gene072590.t1 | AT3G61028 | 45.181 | 166 | 88 | 3 | 15 | 177 | 78 | 243 | 1.93e-43 | 157 |
| MS.gene072590.t1 | AT3G60940 | 47.429 | 175 | 83 | 3 | 12 | 177 | 76 | 250 | 3.82e-43 | 156 |
| MS.gene072590.t1 | AT3G60940 | 47.429 | 175 | 83 | 3 | 12 | 177 | 76 | 250 | 3.82e-43 | 156 |
| MS.gene072590.t1 | AT5G64710 | 42.138 | 159 | 91 | 1 | 11 | 168 | 54 | 212 | 1.17e-37 | 150 |
| MS.gene072590.t1 | AT5G09840 | 41.935 | 155 | 90 | 0 | 11 | 165 | 65 | 219 | 2.82e-37 | 149 |
| MS.gene072590.t1 | AT5G61190 | 66.055 | 109 | 35 | 2 | 101 | 207 | 1 | 109 | 2.18e-35 | 143 |
| MS.gene072590.t1 | AT5G61190 | 66.055 | 109 | 35 | 2 | 101 | 207 | 1 | 109 | 2.18e-35 | 143 |
| MS.gene072590.t1 | AT2G15560 | 41.290 | 155 | 87 | 3 | 15 | 165 | 46 | 200 | 4.52e-27 | 115 |
| MS.gene072590.t1 | AT2G15560 | 41.290 | 155 | 87 | 3 | 15 | 165 | 46 | 200 | 4.93e-27 | 115 |
| MS.gene072590.t1 | AT3G62850 | 30.841 | 214 | 131 | 6 | 9 | 211 | 230 | 437 | 6.83e-22 | 99.8 |
| MS.gene072590.t1 | AT3G62850 | 31.210 | 157 | 102 | 2 | 10 | 163 | 7 | 160 | 3.55e-18 | 88.2 |
| MS.gene072590.t1 | AT3G61028 | 40.517 | 116 | 67 | 2 | 15 | 128 | 78 | 193 | 1.07e-21 | 95.5 |
| MS.gene072590.t1 | AT3G62050 | 36.434 | 129 | 73 | 3 | 14 | 139 | 9 | 131 | 4.27e-20 | 88.2 |
| MS.gene072590.t1 | AT5G35640 | 31.111 | 135 | 88 | 2 | 17 | 147 | 32 | 165 | 7.26e-15 | 73.9 |
| MS.gene072590.t1 | AT3G61090 | 29.480 | 173 | 106 | 5 | 18 | 180 | 12 | 178 | 2.13e-14 | 72.4 |
| MS.gene072590.t1 | AT5G64710 | 41.463 | 82 | 47 | 1 | 88 | 168 | 6 | 87 | 3.63e-14 | 76.3 |
| MS.gene072590.t1 | AT3G62460 | 29.927 | 137 | 88 | 3 | 18 | 149 | 58 | 191 | 6.51e-12 | 65.5 |
| MS.gene072590.t1 | AT1G01355 | 32.450 | 151 | 96 | 3 | 28 | 174 | 11 | 159 | 1.38e-11 | 65.1 |
| MS.gene072590.t1 | AT3G56730 | 33.019 | 106 | 65 | 1 | 15 | 120 | 7 | 106 | 2.52e-11 | 63.2 |
| MS.gene072590.t1 | AT3G61100 | 28.485 | 165 | 98 | 5 | 18 | 170 | 8 | 164 | 2.93e-11 | 62.8 |
| MS.gene072590.t1 | AT3G56730 | 30.357 | 112 | 72 | 1 | 9 | 120 | 9 | 114 | 3.82e-11 | 62.8 |
| MS.gene072590.t1 | AT3G56730 | 30.357 | 112 | 72 | 1 | 9 | 120 | 9 | 114 | 3.82e-11 | 62.8 |
| MS.gene072590.t1 | AT1G01355 | 31.788 | 151 | 93 | 3 | 28 | 174 | 11 | 155 | 4.29e-11 | 63.5 |
| MS.gene072590.t1 | AT3G56730 | 32.692 | 104 | 64 | 1 | 17 | 120 | 11 | 108 | 8.31e-11 | 61.6 |
| MS.gene072590.t1 | AT5G64450 | 35.000 | 120 | 64 | 6 | 52 | 162 | 34 | 148 | 9.06e-11 | 61.6 |
Find 191 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGAATTATTTATTGATTT+CGG | 0.150955 | 7.4:-4783545 | MS.gene072590:CDS |
| GCGAATTATTTATTGATTTC+GGG | 0.173410 | 7.4:-4783544 | MS.gene072590:CDS |
| GGAAAACCGTTTGGTCTTAA+TGG | 0.186135 | 7.4:+4782920 | None:intergenic |
| AACAGCACTCCAAAGAAATT+TGG | 0.210078 | 7.4:-4782235 | MS.gene072590:CDS |
| TCCTTGTCGACATGCTGTTC+TGG | 0.215607 | 7.4:-4783588 | MS.gene072590:CDS |
| CCAATATCTGGCACAGTTCT+AGG | 0.226868 | 7.4:+4782788 | None:intergenic |
| GTTGCAAAAGTATGGGAATT+TGG | 0.231833 | 7.4:+4782860 | None:intergenic |
| GGGATTTGATTCTAGATATC+AGG | 0.233096 | 7.4:-4783215 | MS.gene072590:CDS |
| AATTTCGTCCCAAATTTCTT+TGG | 0.251306 | 7.4:+4782226 | None:intergenic |
| GGTCTTAATGGCTGGGAATA+TGG | 0.268984 | 7.4:+4782932 | None:intergenic |
| ATTTCTTTGGAGTGCTGTTT+AGG | 0.279080 | 7.4:+4782239 | None:intergenic |
| GAATATGTACAAGGCCTTAT+AGG | 0.288105 | 7.4:-4782497 | MS.gene072590:CDS |
| TGTACATATTCAGAAGGTTT+AGG | 0.309220 | 7.4:+4782509 | None:intergenic |
| CCTAGAACTGTGCCAGATAT+TGG | 0.310900 | 7.4:-4782788 | MS.gene072590:CDS |
| TGCTGGTAGATCGGCAATAA+TGG | 0.316014 | 7.4:-4782183 | MS.gene072590:CDS |
| ACCTCCTCATTCGCAGTTGA+TGG | 0.324550 | 7.4:+4783497 | None:intergenic |
| CCGGTGTAGTTGCAAAAGTA+TGG | 0.328541 | 7.4:+4782852 | None:intergenic |
| AATGGTAAGTGGGGATCTTC+AGG | 0.332723 | 7.4:-4782536 | MS.gene072590:CDS |
| CCAGCATGAATTTCAGAATA+GGG | 0.333740 | 7.4:+4783265 | None:intergenic |
| CCTGAGTCAAACCCCGATTC+AGG | 0.342982 | 7.4:-4781896 | MS.gene072590:CDS |
| GCATGTGGATCGGAGCCTTT+AGG | 0.345450 | 7.4:+4784675 | None:intergenic |
| AATAATAAACTTCCCTCTAA+TGG | 0.351040 | 7.4:-4782554 | MS.gene072590:CDS |
| AGATCAACGAATGAACAAAA+TGG | 0.352005 | 7.4:-4782656 | MS.gene072590:CDS |
| ATGTTCAGATTGCCAATATC+TGG | 0.357086 | 7.4:+4782776 | None:intergenic |
| AACATCGGTGTTGCGATGCT+TGG | 0.359132 | 7.4:+4782385 | None:intergenic |
| CGGTTATCTTGAAGTCCAAC+TGG | 0.361639 | 7.4:+4783133 | None:intergenic |
| GATAATTGTTTACATTATTA+CGG | 0.362001 | 7.4:+4783113 | None:intergenic |
| GATCCATTATGGAGCAATAA+TGG | 0.362238 | 7.4:-4783022 | MS.gene072590:CDS |
| GATCCACTTTGAGGAACATT+TGG | 0.363780 | 7.4:+4783073 | None:intergenic |
| TTACCATTATTGCTCCATAA+TGG | 0.363932 | 7.4:+4783019 | None:intergenic |
| TGTTCATTCGTTGATCTTAC+CGG | 0.368690 | 7.4:+4782662 | None:intergenic |
| AACCGTTTGGTCTTAATGGC+TGG | 0.379988 | 7.4:+4782924 | None:intergenic |
| AGGAAATCATCAAAATCAAC+AGG | 0.380452 | 7.4:-4782990 | MS.gene072590:CDS |
| ATTGGCAATCTGAACATATC+TGG | 0.381321 | 7.4:-4782770 | MS.gene072590:CDS |
| TGCTGCTCAGACACAGCAAC+AGG | 0.385298 | 7.4:-4783293 | MS.gene072590:CDS |
| AGATCCCCACTTACCATTAG+AGG | 0.389364 | 7.4:+4782541 | None:intergenic |
| AACATGATTAAGTGAAATTC+CGG | 0.391711 | 7.4:+4784533 | None:intergenic |
| GGGAAATCATCAAAATCAAC+AGG | 0.391798 | 7.4:-4782969 | MS.gene072590:CDS |
| TTCATGGCTTTCGGTCCATT+TGG | 0.392243 | 7.4:+4783163 | None:intergenic |
| GGAAGTGGAGCACTACTCTT+AGG | 0.394120 | 7.4:+4782683 | None:intergenic |
| AATAAATAATTCGCAGGTGC+AGG | 0.398280 | 7.4:+4783553 | None:intergenic |
| TTCGTTGATCTTACCGGAAG+TGG | 0.402973 | 7.4:+4782668 | None:intergenic |
| TTCGGTCCATTTGGTTGACT+CGG | 0.404852 | 7.4:+4783172 | None:intergenic |
| CAGCTAAGAGTGTATGGCTT+TGG | 0.407793 | 7.4:-4783423 | MS.gene072590:CDS |
| TAAGAGTAGTGCTCCACTTC+CGG | 0.410866 | 7.4:-4782681 | MS.gene072590:CDS |
| CAAGTAAAACAACACCTATA+AGG | 0.412949 | 7.4:+4782483 | None:intergenic |
| TCAGAAGTCACCCCTGAATC+GGG | 0.413185 | 7.4:+4781884 | None:intergenic |
| ACTCCGTTGCGGAACAGTGC+GGG | 0.413493 | 7.4:+4782724 | None:intergenic |
| GAGTGTGTAGGTTGATATTC+TGG | 0.418613 | 7.4:+4782590 | None:intergenic |
| CCTTGTCGACATGCTGTTCT+GGG | 0.419680 | 7.4:-4783587 | MS.gene072590:CDS |
| ACAGCACTCCAAAGAAATTT+GGG | 0.420086 | 7.4:-4782234 | MS.gene072590:CDS |
| CTTCTCAGTTGGCATCATCT+TGG | 0.424167 | 7.4:+4782439 | None:intergenic |
| GCGCCAATTCTGATCCATTA+TGG | 0.426102 | 7.4:-4783033 | MS.gene072590:CDS |
| GCTCCATAATGGATCAGAAT+TGG | 0.428216 | 7.4:+4783030 | None:intergenic |
| ATATCTGGTTATCCCAATAA+TGG | 0.432994 | 7.4:-4782755 | MS.gene072590:CDS |
| GTATACGACGGCGAAGATAT+CGG | 0.442192 | 7.4:-4784727 | MS.gene072590:CDS |
| ACATCGGTGTTGCGATGCTT+GGG | 0.448328 | 7.4:+4782386 | None:intergenic |
| GTCAGAAGTCACCCCTGAAT+CGG | 0.449046 | 7.4:+4781883 | None:intergenic |
| GAATGAACAAAATGGACATA+TGG | 0.450541 | 7.4:-4782648 | MS.gene072590:CDS |
| TCCAGCATGAATTTCAGAAT+AGG | 0.452577 | 7.4:+4783264 | None:intergenic |
| TATGAATTACTAGGTGCAAA+AGG | 0.459744 | 7.4:+4782887 | None:intergenic |
| ACCGTTTGGTCTTAATGGCT+GGG | 0.462546 | 7.4:+4782925 | None:intergenic |
| CTTTGGACTACTCTCTTAGC+TGG | 0.463279 | 7.4:-4783406 | MS.gene072590:CDS |
| TGTGTATCACCACTGGTTAG+TGG | 0.463529 | 7.4:+4783376 | None:intergenic |
| TGGATAATTCATCAGCAGTC+TGG | 0.469032 | 7.4:-4781944 | MS.gene072590:CDS |
| ATGGTGGTAAAACAAAATTT+AGG | 0.469766 | 7.4:-4782329 | MS.gene072590:CDS |
| CCCTCCATCAACTGCGAATG+AGG | 0.471098 | 7.4:-4783501 | MS.gene072590:CDS |
| GGAGCACTACTCTTAGGATT+CGG | 0.471163 | 7.4:+4782689 | None:intergenic |
| CGACATGCTGTTCTGGGCAG+TGG | 0.473730 | 7.4:-4783581 | MS.gene072590:CDS |
| ATAACTGATAGCATCCGTTA+TGG | 0.474762 | 7.4:-4782413 | MS.gene072590:CDS |
| ATTGGCGCGCTCAAAGTTTG+TGG | 0.477749 | 7.4:+4783048 | None:intergenic |
| TTGCAGCAGCTAAGAGTGTA+TGG | 0.479275 | 7.4:-4783429 | MS.gene072590:CDS |
| ACATTTGGATTATAGTTGCC+AGG | 0.480104 | 7.4:+4783088 | None:intergenic |
| GGTTGCAATGGAAAACCGTT+TGG | 0.481798 | 7.4:+4782911 | None:intergenic |
| GGTGTCACCGTAGGCGGAGA+TGG | 0.483267 | 7.4:+4784596 | None:intergenic |
| TAAGATCAGATGGGCGGAGG+TGG | 0.484744 | 7.4:-4784774 | None:intergenic |
| TCAGTTATATTCTTCTCAGT+TGG | 0.486950 | 7.4:+4782428 | None:intergenic |
| AACTTCCCTCTAATGGTAAG+TGG | 0.488285 | 7.4:-4782547 | MS.gene072590:CDS |
| CCGTAGGCGGAGATGGAAAC+GGG | 0.489402 | 7.4:+4784603 | None:intergenic |
| CCCGTTTCCATCTCCGCCTA+CGG | 0.493859 | 7.4:-4784603 | MS.gene072590:CDS |
| GAAAACTGTCATGTTCCTAA+AGG | 0.494196 | 7.4:-4784690 | MS.gene072590:CDS |
| TGGAAGTGTGTAAATCCCTT+AGG | 0.494619 | 7.4:-4782269 | MS.gene072590:CDS |
| CAAATGTTCAAAACGGAGGA+AGG | 0.495613 | 7.4:-4783237 | MS.gene072590:CDS |
| CTGTTTAGGATTTCCACCTA+AGG | 0.496032 | 7.4:+4782253 | None:intergenic |
| CCTACACACTCGACAGCAAT+GGG | 0.496891 | 7.4:-4782578 | MS.gene072590:CDS |
| TTGGTAAGAATGACAAACTC+TGG | 0.500710 | 7.4:-4782289 | MS.gene072590:CDS |
| AAATTGTTGCCAACAGTCCT+AGG | 0.502255 | 7.4:+4782824 | None:intergenic |
| CCCTATTCTGAAATTCATGC+TGG | 0.505000 | 7.4:-4783265 | MS.gene072590:CDS |
| TTTGGAGAATATGAATTACT+AGG | 0.506209 | 7.4:+4782878 | None:intergenic |
| AACAACCCCTGCTGGTAGAT+CGG | 0.506607 | 7.4:-4782192 | MS.gene072590:CDS |
| CTGAGTCAAACCCCGATTCA+GGG | 0.507183 | 7.4:-4781895 | MS.gene072590:CDS |
| CTCCGTTGCGGAACAGTGCG+GGG | 0.510872 | 7.4:+4782725 | None:intergenic |
| TCGGTCCATTTGGTTGACTC+GGG | 0.511015 | 7.4:+4783173 | None:intergenic |
| ACCGTAGGCGGAGATGGAAA+CGG | 0.511972 | 7.4:+4784602 | None:intergenic |
| AATCCAAATGTTCCTCAAAG+TGG | 0.513048 | 7.4:-4783076 | MS.gene072590:CDS |
| CCTGAATCGGGGTTTGACTC+AGG | 0.515729 | 7.4:+4781896 | None:intergenic |
| AATGTTCAAAACGGAGGAAG+GGG | 0.517066 | 7.4:-4783235 | MS.gene072590:CDS |
| TAATTCATCAGCAGTCTGGC+TGG | 0.517933 | 7.4:-4781940 | MS.gene072590:CDS |
| TGACTCGGGTTTCTCCAAGT+TGG | 0.524058 | 7.4:+4783187 | None:intergenic |
| TATTTCTGTAGGTATGAAGC+AGG | 0.525565 | 7.4:-4782052 | MS.gene072590:intron |
| GTTGGCAACAATTTCAGTAC+AGG | 0.526636 | 7.4:-4782815 | MS.gene072590:CDS |
| TCCCAGCCATTAAGACCAAA+CGG | 0.527762 | 7.4:-4782926 | MS.gene072590:CDS |
| TTTGTGGTTGATCCACTTTG+AGG | 0.528704 | 7.4:+4783064 | None:intergenic |
| CAACTACACCGGTGCCACCT+AGG | 0.529046 | 7.4:-4782841 | MS.gene072590:CDS |
| GATATCAGGGTAGACCAACT+TGG | 0.529804 | 7.4:-4783201 | MS.gene072590:CDS |
| ATTATTGCCGATCTACCAGC+AGG | 0.530418 | 7.4:+4782185 | None:intergenic |
| CACCGATGTTAAGAAAGCTC+TGG | 0.531404 | 7.4:-4782372 | MS.gene072590:CDS |
| ACTTCCCTCTAATGGTAAGT+GGG | 0.534715 | 7.4:-4782546 | MS.gene072590:CDS |
| GGAAATTCAAATGTTCAAAA+CGG | 0.536448 | 7.4:-4783244 | MS.gene072590:CDS |
| GAAAGCTCTGGAGAGTGCTA+TGG | 0.538754 | 7.4:-4782360 | MS.gene072590:CDS |
| CCAACAGTCCTAGGTGGCAC+CGG | 0.539658 | 7.4:+4782833 | None:intergenic |
| ACCTACACACTCGACAGCAA+TGG | 0.545629 | 7.4:-4782579 | MS.gene072590:CDS |
| TTCAAATCTCCACTCCGTTG+CGG | 0.550016 | 7.4:+4782713 | None:intergenic |
| GTCTGAGCAGCATTTGAGAC+AGG | 0.550440 | 7.4:+4783304 | None:intergenic |
| GGTTATCTTGAAGTCCAACT+GGG | 0.555376 | 7.4:+4783134 | None:intergenic |
| CGGTGTAGTTGCAAAAGTAT+GGG | 0.556383 | 7.4:+4782853 | None:intergenic |
| CTGCGCAATTGCATGTGGAT+CGG | 0.560127 | 7.4:+4784665 | None:intergenic |
| TGTTTAGGATTTCCACCTAA+GGG | 0.560176 | 7.4:+4782254 | None:intergenic |
| CCGGTGCCACCTAGGACTGT+TGG | 0.561100 | 7.4:-4782833 | MS.gene072590:CDS |
| GGATTTGATTCTAGATATCA+GGG | 0.561545 | 7.4:-4783214 | MS.gene072590:CDS |
| CTCTTAGCTGCTGCAACTAG+TGG | 0.562484 | 7.4:+4783436 | None:intergenic |
| TGGACTACTCTCTTAGCTGG+AGG | 0.562680 | 7.4:-4783403 | MS.gene072590:CDS |
| AGGCCTTGTACATATTCAGA+AGG | 0.565970 | 7.4:+4782503 | None:intergenic |
| AAATGTTCAAAACGGAGGAA+GGG | 0.566489 | 7.4:-4783236 | MS.gene072590:CDS |
| GGCGAAGATATCGGTATGGT+GGG | 0.567110 | 7.4:-4784718 | MS.gene072590:CDS |
| GGTGCTTTAACGCTGTATGT+TGG | 0.568779 | 7.4:-4782308 | MS.gene072590:CDS |
| ATAAATAATTCGCAGGTGCA+GGG | 0.569096 | 7.4:+4783554 | None:intergenic |
| AGAAACCCGAGTCAACCAAA+TGG | 0.569109 | 7.4:-4783178 | MS.gene072590:CDS |
| CGGCGAAGATATCGGTATGG+TGG | 0.569397 | 7.4:-4784719 | MS.gene072590:CDS |
| GAAATCAATAAATAATTCGC+AGG | 0.575414 | 7.4:+4783547 | None:intergenic |
| CTTCCCTCTAATGGTAAGTG+GGG | 0.577253 | 7.4:-4782545 | MS.gene072590:CDS |
| TCCTCATTCGCAGTTGATGG+AGG | 0.578055 | 7.4:+4783500 | None:intergenic |
| GGTGCAAAAGGAGGTTGCAA+TGG | 0.586116 | 7.4:+4782899 | None:intergenic |
| CGCACTGTTCCGCAACGGAG+TGG | 0.587754 | 7.4:-4782722 | MS.gene072590:CDS |
| CTCCAGAGCTTTCTTAACAT+CGG | 0.590270 | 7.4:+4782370 | None:intergenic |
| GATGCTTGGGATCTCCATAA+CGG | 0.593120 | 7.4:+4782399 | None:intergenic |
| ACGAGTGGTGTCACCGTAGG+CGG | 0.595030 | 7.4:+4784590 | None:intergenic |
| TGCTCAGACACAGCAACAGG+GGG | 0.595588 | 7.4:-4783290 | MS.gene072590:CDS |
| CAGCACGCGCTTTCTAGCAC+CGG | 0.596449 | 7.4:-4784552 | MS.gene072590:CDS |
| GAGTTGTTGTGTATCACCAC+TGG | 0.599166 | 7.4:+4783369 | None:intergenic |
| AGATAAGATCAGATGGGCGG+AGG | 0.599612 | 7.4:-4784777 | None:intergenic |
| CCTCATTCGCAGTTGATGGA+GGG | 0.600072 | 7.4:+4783501 | None:intergenic |
| ACTTGTATAGTTTCAGAAGA+CGG | 0.600079 | 7.4:+4783328 | None:intergenic |
| AAACCTTCTGAATATGTACA+AGG | 0.601145 | 7.4:-4782506 | MS.gene072590:CDS |
| CCCAGAACAGCATGTCGACA+AGG | 0.601862 | 7.4:+4783587 | None:intergenic |
| TCACTTAATCATGTTCCCGC+CGG | 0.605523 | 7.4:-4784525 | MS.gene072590:intron |
| GGTTTGACTCAGGAAGAGTA+AGG | 0.605762 | 7.4:+4781906 | None:intergenic |
| GATCCCCACTTACCATTAGA+GGG | 0.607911 | 7.4:+4782542 | None:intergenic |
| CACTCCGTTGCGGAACAGTG+CGG | 0.607972 | 7.4:+4782723 | None:intergenic |
| AAGTGTGTAAATCCCTTAGG+TGG | 0.612305 | 7.4:-4782266 | MS.gene072590:CDS |
| TGCTATGGAGCAGCAGATGG+TGG | 0.612792 | 7.4:-4782345 | MS.gene072590:CDS |
| TCACCATGTTCAATATCTGA+AGG | 0.616291 | 7.4:+4781981 | None:intergenic |
| CTTGTTCGTATGAACTATTG+TGG | 0.616869 | 7.4:-4784627 | MS.gene072590:CDS |
| TCCGTTGCGGAACAGTGCGG+GGG | 0.622717 | 7.4:+4782726 | None:intergenic |
| CCCATTGCTGTCGAGTGTGT+AGG | 0.626853 | 7.4:+4782578 | None:intergenic |
| TCAGGAAGAGTAAGGATGAG+TGG | 0.633719 | 7.4:+4781914 | None:intergenic |
| CGACGGCGAAGATATCGGTA+TGG | 0.634124 | 7.4:-4784722 | MS.gene072590:CDS |
| AGCAATAATGGTAATCAACA+AGG | 0.635068 | 7.4:-4783010 | MS.gene072590:CDS |
| CTGCTCAGACACAGCAACAG+GGG | 0.637667 | 7.4:-4783291 | MS.gene072590:CDS |
| TATTGCCGATCTACCAGCAG+GGG | 0.638854 | 7.4:+4782187 | None:intergenic |
| ATATTCTGCGCAATTGCATG+TGG | 0.639515 | 7.4:+4784660 | None:intergenic |
| TGAGTCAAACCCCGATTCAG+GGG | 0.644565 | 7.4:-4781894 | MS.gene072590:CDS |
| GAGTGCTATGGAGCAGCAGA+TGG | 0.644619 | 7.4:-4782348 | MS.gene072590:CDS |
| AATTCAAATGTTCAAAACGG+AGG | 0.648741 | 7.4:-4783241 | MS.gene072590:CDS |
| GCTGCTCAGACACAGCAACA+GGG | 0.650440 | 7.4:-4783292 | MS.gene072590:CDS |
| AATGTAAACAATTATCGACC+TGG | 0.651786 | 7.4:-4783106 | MS.gene072590:CDS |
| TCCATCAACTGCGAATGAGG+AGG | 0.652227 | 7.4:-4783498 | MS.gene072590:CDS |
| ACCACTCAAGGCTATCCACA+TGG | 0.657824 | 7.4:-4782614 | MS.gene072590:CDS |
| AGCGCGTGCTGTACAGACGC+AGG | 0.658760 | 7.4:+4784564 | None:intergenic |
| GTGCATAGCAGTACCACTCA+AGG | 0.659605 | 7.4:-4782626 | MS.gene072590:CDS |
| GTATCACCACTGGTTAGTGG+AGG | 0.662670 | 7.4:+4783379 | None:intergenic |
| CAGAAGTCACCCCTGAATCG+GGG | 0.665735 | 7.4:+4781885 | None:intergenic |
| CGCGGAGGCGCAGTATACGA+CGG | 0.668480 | 7.4:-4784739 | MS.gene072590:CDS |
| TATACGAGTGGTGTCACCGT+AGG | 0.671792 | 7.4:+4784587 | None:intergenic |
| CGGAGATAAGATCAGATGGG+CGG | 0.673527 | 7.4:-4784780 | None:intergenic |
| TGTCCTTCAGATATTGAACA+TGG | 0.677199 | 7.4:-4781984 | MS.gene072590:CDS |
| TTATTGCCGATCTACCAGCA+GGG | 0.679539 | 7.4:+4782186 | None:intergenic |
| GAAATCATCAAAATCAACAG+GGG | 0.679631 | 7.4:-4782967 | MS.gene072590:CDS |
| GTTATCTTGAAGTCCAACTG+GGG | 0.686988 | 7.4:+4783135 | None:intergenic |
| AGGTGGAGCGACAACTAACG+CGG | 0.688181 | 7.4:-4784757 | MS.gene072590:CDS |
| GGAGGACCTCCACTAACCAG+TGG | 0.691674 | 7.4:-4783385 | MS.gene072590:CDS |
| GGAAATCATCAAAATCAACA+GGG | 0.697219 | 7.4:-4782968 | MS.gene072590:CDS |
| GGTTGATATTCTGGACCATG+TGG | 0.700176 | 7.4:+4782599 | None:intergenic |
| TTATCTTGAAGTCCAACTGG+GGG | 0.703666 | 7.4:+4783136 | None:intergenic |
| TACAGACGCAGGTATACGAG+TGG | 0.706607 | 7.4:+4784575 | None:intergenic |
| GAATTACTAGGTGCAAAAGG+AGG | 0.707826 | 7.4:+4782890 | None:intergenic |
| TGGAGCGACAACTAACGCGG+AGG | 0.712925 | 7.4:-4784754 | MS.gene072590:CDS |
| TTGTTGCCAACAGTCCTAGG+TGG | 0.727786 | 7.4:+4782827 | None:intergenic |
| GGAAATCATCAAAATCAACA+GGG | 0.731421 | 7.4:-4782989 | MS.gene072590:CDS |
| GCTCAGACACAGCAACAGGG+GGG | 0.746430 | 7.4:-4783289 | MS.gene072590:CDS |
| ACCATGTGGATAGCCTTGAG+TGG | 0.749894 | 7.4:+4782613 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATTGTTTACATTATTA+CGG | + | chr7.4:4783532-4783551 | None:intergenic | 15.0% |
| !!! | ATGAATATAGTCTATTTTAT+TGG | + | chr7.4:4784532-4784551 | None:intergenic | 15.0% |
| !!! | ATGAATTATCCATTTTTTAT+GGG | + | chr7.4:4784690-4784709 | None:intergenic | 15.0% |
| !!! | GATGAATTATCCATTTTTTA+TGG | + | chr7.4:4784691-4784710 | None:intergenic | 20.0% |
| !!! | TGCGAATTATTTATTGATTT+CGG | - | chr7.4:4783097-4783116 | MS.gene072590:CDS | 20.0% |
| !!! | TTGAATTTTTTCTCAGTATA+AGG | - | chr7.4:4782374-4782393 | MS.gene072590:CDS | 20.0% |
| ! | AACATGATTAAGTGAAATTC+CGG | + | chr7.4:4782112-4782131 | None:intergenic | 25.0% |
| ! | AATAATAAACTTCCCTCTAA+TGG | - | chr7.4:4784088-4784107 | MS.gene072590:intron | 25.0% |
| ! | ATGGTGGTAAAACAAAATTT+AGG | - | chr7.4:4784313-4784332 | MS.gene072590:intron | 25.0% |
| ! | GAAATCAATAAATAATTCGC+AGG | + | chr7.4:4783098-4783117 | None:intergenic | 25.0% |
| ! | GGAAATTCAAATGTTCAAAA+CGG | - | chr7.4:4783398-4783417 | MS.gene072590:CDS | 25.0% |
| ! | TGTTGAACAGTTAATACATT+TGG | - | chr7.4:4782896-4782915 | MS.gene072590:CDS | 25.0% |
| ! | TTATCAAAATTACACCTCAA+AGG | + | chr7.4:4782756-4782775 | None:intergenic | 25.0% |
| ! | TTTGGAGAATATGAATTACT+AGG | + | chr7.4:4783767-4783786 | None:intergenic | 25.0% |
| !! | TGTTGATTGAAAGATAGATT+TGG | - | chr7.4:4782833-4782852 | MS.gene072590:CDS | 25.0% |
| !! | TTCATTTCTGTGATTGATTT+GGG | - | chr7.4:4782264-4782283 | MS.gene072590:CDS | 25.0% |
| !!! | AATTTCACACTATTGATTTG+TGG | + | chr7.4:4782955-4782974 | None:intergenic | 25.0% |
| !!! | ATGGTTTTAAATTGTGATTG+CGG | - | chr7.4:4782413-4782432 | MS.gene072590:CDS | 25.0% |
| !!! | CTTTTTTCATGTTTGGTTAT+AGG | - | chr7.4:4783005-4783024 | MS.gene072590:CDS | 25.0% |
| !!! | GAGGTGTAATTTTGATAATT+TGG | - | chr7.4:4782758-4782777 | MS.gene072590:CDS | 25.0% |
| !!! | GCGAATTATTTATTGATTTC+GGG | - | chr7.4:4783098-4783117 | MS.gene072590:CDS | 25.0% |
| !!! | GTGTGAAATTTTGATACATT+TGG | - | chr7.4:4782965-4782984 | MS.gene072590:CDS | 25.0% |
| !!! | TGAATCTATTCTATTTCTGT+AGG | - | chr7.4:4784579-4784598 | MS.gene072590:CDS | 25.0% |
| !!! | TGTTTTAAAGATCTTGCTTT+GGG | - | chr7.4:4784632-4784651 | MS.gene072590:CDS | 25.0% |
| AAACCTTCTGAATATGTACA+AGG | - | chr7.4:4784136-4784155 | MS.gene072590:intron | 30.0% | |
| AATGTAAACAATTATCGACC+TGG | - | chr7.4:4783536-4783555 | MS.gene072590:CDS | 30.0% | |
| AATTCAAATGTTCAAAACGG+AGG | - | chr7.4:4783401-4783420 | MS.gene072590:CDS | 30.0% | |
| AATTTCGTCCCAAATTTCTT+TGG | + | chr7.4:4784419-4784438 | None:intergenic | 30.0% | |
| ACTTGTATAGTTTCAGAAGA+CGG | + | chr7.4:4783317-4783336 | None:intergenic | 30.0% | |
| AGAATAGATTCATCAGAATG+CGG | + | chr7.4:4784571-4784590 | None:intergenic | 30.0% | |
| AGATCAACGAATGAACAAAA+TGG | - | chr7.4:4783986-4784005 | MS.gene072590:intron | 30.0% | |
| AGCAATAATGGTAATCAACA+AGG | - | chr7.4:4783632-4783651 | MS.gene072590:intron | 30.0% | |
| AGCTATGATTTATGAACTGT+CGG | - | chr7.4:4782185-4782204 | MS.gene072590:CDS | 30.0% | |
| AGGAAATCATCAAAATCAAC+AGG | - | chr7.4:4783652-4783671 | MS.gene072590:intron | 30.0% | |
| ATATCTGGTTATCCCAATAA+TGG | - | chr7.4:4783887-4783906 | MS.gene072590:intron | 30.0% | |
| ATCACGTGATAAATAAGTCA+GGG | + | chr7.4:4782538-4782557 | None:intergenic | 30.0% | |
| CAAGTAAAACAACACCTATA+AGG | + | chr7.4:4784162-4784181 | None:intergenic | 30.0% | |
| GAAATCATCAAAATCAACAG+GGG | - | chr7.4:4783654-4783673 | MS.gene072590:intron | 30.0% | |
| GAATGAACAAAATGGACATA+TGG | - | chr7.4:4783994-4784013 | MS.gene072590:intron | 30.0% | |
| GGAAATCATCAAAATCAACA+GGG | - | chr7.4:4783653-4783672 | MS.gene072590:intron | 30.0% | |
| GGATTTGATTCTAGATATCA+GGG | - | chr7.4:4783428-4783447 | MS.gene072590:CDS | 30.0% | |
| GTTCATTTCTGTGATTGATT+TGG | - | chr7.4:4782263-4782282 | MS.gene072590:CDS | 30.0% | |
| TATGAATTACTAGGTGCAAA+AGG | + | chr7.4:4783758-4783777 | None:intergenic | 30.0% | |
| TCAGTTATATTCTTCTCAGT+TGG | + | chr7.4:4784217-4784236 | None:intergenic | 30.0% | |
| TGGTGATAACCCATAAAAAA+TGG | - | chr7.4:4784678-4784697 | MS.gene072590:CDS | 30.0% | |
| TGTACATATTCAGAAGGTTT+AGG | + | chr7.4:4784136-4784155 | None:intergenic | 30.0% | |
| TTACCATTATTGCTCCATAA+TGG | + | chr7.4:4783626-4783645 | None:intergenic | 30.0% | |
| TTTCACACAATCAATCAACA+CGG | + | chr7.4:4782791-4782810 | None:intergenic | 30.0% | |
| ! | GGTATTAAGAATCTGATTTG+TGG | - | chr7.4:4782585-4782604 | MS.gene072590:CDS | 30.0% |
| !!! | ATTGATTTGGGTATTTTACG+CGG | - | chr7.4:4782276-4782295 | MS.gene072590:CDS | 30.0% |
| !!! | GTGTTTTAAAGATCTTGCTT+TGG | - | chr7.4:4784631-4784650 | MS.gene072590:CDS | 30.0% |
| AAATGTTCAAAACGGAGGAA+GGG | - | chr7.4:4783406-4783425 | MS.gene072590:CDS | 35.0% | |
| AACAGCACTCCAAAGAAATT+TGG | - | chr7.4:4784407-4784426 | MS.gene072590:intron | 35.0% | |
| AATAAATAATTCGCAGGTGC+AGG | + | chr7.4:4783092-4783111 | None:intergenic | 35.0% | |
| AATAGATTCATCAGAATGCG+GGG | + | chr7.4:4784569-4784588 | None:intergenic | 35.0% | |
| AATCCAAATGTTCCTCAAAG+TGG | - | chr7.4:4783566-4783585 | MS.gene072590:CDS | 35.0% | |
| AATCGAAGTAAGTTCGTTAC+CGG | + | chr7.4:4782139-4782158 | None:intergenic | 35.0% | |
| ACAGCACTCCAAAGAAATTT+GGG | - | chr7.4:4784408-4784427 | MS.gene072590:intron | 35.0% | |
| ACATTTGGATTATAGTTGCC+AGG | + | chr7.4:4783557-4783576 | None:intergenic | 35.0% | |
| ATAAATAATTCGCAGGTGCA+GGG | + | chr7.4:4783091-4783110 | None:intergenic | 35.0% | |
| ATAACTGATAGCATCCGTTA+TGG | - | chr7.4:4784229-4784248 | MS.gene072590:intron | 35.0% | |
| ATGTTCAGATTGCCAATATC+TGG | + | chr7.4:4783869-4783888 | None:intergenic | 35.0% | |
| ATTGGCAATCTGAACATATC+TGG | - | chr7.4:4783872-4783891 | MS.gene072590:intron | 35.0% | |
| CACAGTTTGTACTGTCTATA+TGG | - | chr7.4:4782564-4782583 | MS.gene072590:CDS | 35.0% | |
| CATCACGTGATAAATAAGTC+AGG | + | chr7.4:4782539-4782558 | None:intergenic | 35.0% | |
| CCAGCATGAATTTCAGAATA+GGG | + | chr7.4:4783380-4783399 | None:intergenic | 35.0% | |
| CTTGTTCGTATGAACTATTG+TGG | - | chr7.4:4782015-4782034 | MS.gene072590:CDS | 35.0% | |
| GAAAACTGTCATGTTCCTAA+AGG | - | chr7.4:4781952-4781971 | MS.gene072590:CDS | 35.0% | |
| GAATAGATTCATCAGAATGC+GGG | + | chr7.4:4784570-4784589 | None:intergenic | 35.0% | |
| GACTTATTTATCACGTGATG+CGG | - | chr7.4:4782539-4782558 | MS.gene072590:CDS | 35.0% | |
| GATCCATTATGGAGCAATAA+TGG | - | chr7.4:4783620-4783639 | MS.gene072590:intron | 35.0% | |
| GGGAAATCATCAAAATCAAC+AGG | - | chr7.4:4783673-4783692 | MS.gene072590:intron | 35.0% | |
| GGGATTTGATTCTAGATATC+AGG | - | chr7.4:4783427-4783446 | MS.gene072590:CDS | 35.0% | |
| TATTGTGATAGCTGATACTG+TGG | - | chr7.4:4782452-4782471 | MS.gene072590:CDS | 35.0% | |
| TCACCATGTTCAATATCTGA+AGG | + | chr7.4:4784664-4784683 | None:intergenic | 35.0% | |
| TCCAGCATGAATTTCAGAAT+AGG | + | chr7.4:4783381-4783400 | None:intergenic | 35.0% | |
| TGGTTCACTTGAAACATTCA+CGG | - | chr7.4:4782853-4782872 | MS.gene072590:CDS | 35.0% | |
| TGTCCTTCAGATATTGAACA+TGG | - | chr7.4:4784658-4784677 | MS.gene072590:CDS | 35.0% | |
| TGTTCATTCGTTGATCTTAC+CGG | + | chr7.4:4783983-4784002 | None:intergenic | 35.0% | |
| TTGGTAAGAATGACAAACTC+TGG | - | chr7.4:4784353-4784372 | MS.gene072590:intron | 35.0% | |
| ! | GAATATGTACAAGGCCTTAT+AGG | - | chr7.4:4784145-4784164 | MS.gene072590:intron | 35.0% |
| ! | GTTGCAAAAGTATGGGAATT+TGG | + | chr7.4:4783785-4783804 | None:intergenic | 35.0% |
| ! | TATTTCTGTAGGTATGAAGC+AGG | - | chr7.4:4784590-4784609 | MS.gene072590:CDS | 35.0% |
| ! | TGTTTAGGATTTCCACCTAA+GGG | + | chr7.4:4784391-4784410 | None:intergenic | 35.0% |
| !! | AAACATTCACGGTTGATTTG+TGG | - | chr7.4:4782864-4782883 | MS.gene072590:CDS | 35.0% |
| !! | AGGTGATTTGATTTGAAGCA+TGG | - | chr7.4:4782394-4782413 | MS.gene072590:CDS | 35.0% |
| !! | ATTTCTTTGGAGTGCTGTTT+AGG | + | chr7.4:4784406-4784425 | None:intergenic | 35.0% |
| !!! | GCTGAAGCTTTTTTCATGTT+TGG | - | chr7.4:4782998-4783017 | MS.gene072590:CDS | 35.0% |
| !!! | GGCATTTTTTAGTGAGTTCA+GGG | + | chr7.4:4784185-4784204 | None:intergenic | 35.0% |
| !!! | TGGCATTTTTTAGTGAGTTC+AGG | + | chr7.4:4784186-4784205 | None:intergenic | 35.0% |
| AAATTGTTGCCAACAGTCCT+AGG | + | chr7.4:4783821-4783840 | None:intergenic | 40.0% | |
| AACTTCCCTCTAATGGTAAG+TGG | - | chr7.4:4784095-4784114 | MS.gene072590:intron | 40.0% | |
| AAGTGTGTAAATCCCTTAGG+TGG | - | chr7.4:4784376-4784395 | MS.gene072590:intron | 40.0% | |
| AATGTTCAAAACGGAGGAAG+GGG | - | chr7.4:4783407-4783426 | MS.gene072590:CDS | 40.0% | |
| ACTTCCCTCTAATGGTAAGT+GGG | - | chr7.4:4784096-4784115 | MS.gene072590:intron | 40.0% | |
| ATATTCTGCGCAATTGCATG+TGG | + | chr7.4:4781985-4782004 | None:intergenic | 40.0% | |
| CAAATGTTCAAAACGGAGGA+AGG | - | chr7.4:4783405-4783424 | MS.gene072590:CDS | 40.0% | |
| CTCCAGAGCTTTCTTAACAT+CGG | + | chr7.4:4784275-4784294 | None:intergenic | 40.0% | |
| GAATTACTAGGTGCAAAAGG+AGG | + | chr7.4:4783755-4783774 | None:intergenic | 40.0% | |
| GGTTATCTTGAAGTCCAACT+GGG | + | chr7.4:4783511-4783530 | None:intergenic | 40.0% | |
| GTTATCTTGAAGTCCAACTG+GGG | + | chr7.4:4783510-4783529 | None:intergenic | 40.0% | |
| GTTGGCAACAATTTCAGTAC+AGG | - | chr7.4:4783827-4783846 | MS.gene072590:intron | 40.0% | |
| TGGATAATTCATCAGCAGTC+TGG | - | chr7.4:4784698-4784717 | MS.gene072590:CDS | 40.0% | |
| TTATCTTGAAGTCCAACTGG+GGG | + | chr7.4:4783509-4783528 | None:intergenic | 40.0% | |
| TTTGTGGTTGATCCACTTTG+AGG | + | chr7.4:4783581-4783600 | None:intergenic | 40.0% | |
| ! | AATTTTCTAACAACCCCTGC+TGG | - | chr7.4:4784442-4784461 | MS.gene072590:intron | 40.0% |
| ! | AGAATGCGGGGATATCTTTT+AGG | + | chr7.4:4784557-4784576 | None:intergenic | 40.0% |
| ! | AGGCCTTGTACATATTCAGA+AGG | + | chr7.4:4784142-4784161 | None:intergenic | 40.0% |
| ! | CCATACTTTTGCAACTACAC+CGG | - | chr7.4:4783790-4783809 | MS.gene072590:intron | 40.0% |
| ! | CGGTGTAGTTGCAAAAGTAT+GGG | + | chr7.4:4783792-4783811 | None:intergenic | 40.0% |
| ! | CTGTTTAGGATTTCCACCTA+AGG | + | chr7.4:4784392-4784411 | None:intergenic | 40.0% |
| ! | GATCCACTTTGAGGAACATT+TGG | + | chr7.4:4783572-4783591 | None:intergenic | 40.0% |
| ! | TGGAAGTGTGTAAATCCCTT+AGG | - | chr7.4:4784373-4784392 | MS.gene072590:intron | 40.0% |
| !! | CCCTATTCTGAAATTCATGC+TGG | - | chr7.4:4783377-4783396 | MS.gene072590:CDS | 40.0% |
| !! | GAGTGTGTAGGTTGATATTC+TGG | + | chr7.4:4784055-4784074 | None:intergenic | 40.0% |
| !! | GCTCCATAATGGATCAGAAT+TGG | + | chr7.4:4783615-4783634 | None:intergenic | 40.0% |
| !! | GGAAAACCGTTTGGTCTTAA+TGG | + | chr7.4:4783725-4783744 | None:intergenic | 40.0% |
| AATGGTAAGTGGGGATCTTC+AGG | - | chr7.4:4784106-4784125 | MS.gene072590:intron | 45.0% | |
| ACACCTCAAAGGCTCAAGAA+AGG | + | chr7.4:4782745-4782764 | None:intergenic | 45.0% | |
| AGAAACCCGAGTCAACCAAA+TGG | - | chr7.4:4783464-4783483 | MS.gene072590:CDS | 45.0% | |
| AGATCCCCACTTACCATTAG+AGG | + | chr7.4:4784104-4784123 | None:intergenic | 45.0% | |
| ATTATTGCCGATCTACCAGC+AGG | + | chr7.4:4784460-4784479 | None:intergenic | 45.0% | |
| CACCGATGTTAAGAAAGCTC+TGG | - | chr7.4:4784270-4784289 | MS.gene072590:intron | 45.0% | |
| CCAATATCTGGCACAGTTCT+AGG | + | chr7.4:4783857-4783876 | None:intergenic | 45.0% | |
| CCGGTGTAGTTGCAAAAGTA+TGG | + | chr7.4:4783793-4783812 | None:intergenic | 45.0% | |
| CCTAGAACTGTGCCAGATAT+TGG | - | chr7.4:4783854-4783873 | MS.gene072590:intron | 45.0% | |
| CGGGGGTTATGACCATTATT+GGG | + | chr7.4:4783902-4783921 | None:intergenic | 45.0% | |
| CGGTTATCTTGAAGTCCAAC+TGG | + | chr7.4:4783512-4783531 | None:intergenic | 45.0% | |
| CTTCCCTCTAATGGTAAGTG+GGG | - | chr7.4:4784097-4784116 | MS.gene072590:intron | 45.0% | |
| CTTCCTTTCTTGAGCCTTTG+AGG | - | chr7.4:4782739-4782758 | MS.gene072590:CDS | 45.0% | |
| CTTCTCAGTTGGCATCATCT+TGG | + | chr7.4:4784206-4784225 | None:intergenic | 45.0% | |
| CTTGTTTGCTTCCTTTCTCG+AGG | - | chr7.4:4782628-4782647 | MS.gene072590:CDS | 45.0% | |
| CTTTGGACTACTCTCTTAGC+TGG | - | chr7.4:4783236-4783255 | MS.gene072590:CDS | 45.0% | |
| GAGTTGTTGTGTATCACCAC+TGG | + | chr7.4:4783276-4783295 | None:intergenic | 45.0% | |
| GATATCAGGGTAGACCAACT+TGG | - | chr7.4:4783441-4783460 | MS.gene072590:CDS | 45.0% | |
| GATCCCCACTTACCATTAGA+GGG | + | chr7.4:4784103-4784122 | None:intergenic | 45.0% | |
| GATGCTTGGGATCTCCATAA+CGG | + | chr7.4:4784246-4784265 | None:intergenic | 45.0% | |
| GCGCCAATTCTGATCCATTA+TGG | - | chr7.4:4783609-4783628 | MS.gene072590:CDS | 45.0% | |
| GGTCTTAATGGCTGGGAATA+TGG | + | chr7.4:4783713-4783732 | None:intergenic | 45.0% | |
| GGTGCTTTAACGCTGTATGT+TGG | - | chr7.4:4784334-4784353 | MS.gene072590:intron | 45.0% | |
| GGTTGCAATGGAAAACCGTT+TGG | + | chr7.4:4783734-4783753 | None:intergenic | 45.0% | |
| GGTTTGACTCAGGAAGAGTA+AGG | + | chr7.4:4784739-4784758 | None:intergenic | 45.0% | |
| GTATACGACGGCGAAGATAT+CGG | - | chr7.4:4781915-4781934 | MS.gene072590:CDS | 45.0% | |
| TAAGAGTAGTGCTCCACTTC+CGG | - | chr7.4:4783961-4783980 | MS.gene072590:intron | 45.0% | |
| TAATTCATCAGCAGTCTGGC+TGG | - | chr7.4:4784702-4784721 | MS.gene072590:CDS | 45.0% | |
| TCACTTAATCATGTTCCCGC+CGG | - | chr7.4:4782117-4782136 | MS.gene072590:intron | 45.0% | |
| TCAGGAAGAGTAAGGATGAG+TGG | + | chr7.4:4784731-4784750 | None:intergenic | 45.0% | |
| TCCCAGCCATTAAGACCAAA+CGG | - | chr7.4:4783716-4783735 | MS.gene072590:intron | 45.0% | |
| TGCTGGTAGATCGGCAATAA+TGG | - | chr7.4:4784459-4784478 | MS.gene072590:intron | 45.0% | |
| TTATTGCCGATCTACCAGCA+GGG | + | chr7.4:4784459-4784478 | None:intergenic | 45.0% | |
| TTCAAATCTCCACTCCGTTG+CGG | + | chr7.4:4783932-4783951 | None:intergenic | 45.0% | |
| TTCATGGCTTTCGGTCCATT+TGG | + | chr7.4:4783482-4783501 | None:intergenic | 45.0% | |
| TTCGGTCCATTTGGTTGACT+CGG | + | chr7.4:4783473-4783492 | None:intergenic | 45.0% | |
| TTCGTTGATCTTACCGGAAG+TGG | + | chr7.4:4783977-4783996 | None:intergenic | 45.0% | |
| TTTGACGAGAATCAGCAACG+TGG | - | chr7.4:4782319-4782338 | MS.gene072590:CDS | 45.0% | |
| ! | CAGCTAAGAGTGTATGGCTT+TGG | - | chr7.4:4783219-4783238 | MS.gene072590:CDS | 45.0% |
| ! | GGAGCACTACTCTTAGGATT+CGG | + | chr7.4:4783956-4783975 | None:intergenic | 45.0% |
| ! | GGTTGATATTCTGGACCATG+TGG | + | chr7.4:4784046-4784065 | None:intergenic | 45.0% |
| ! | TGTGTATCACCACTGGTTAG+TGG | + | chr7.4:4783269-4783288 | None:intergenic | 45.0% |
| ! | TTGCAGCAGCTAAGAGTGTA+TGG | - | chr7.4:4783213-4783232 | MS.gene072590:CDS | 45.0% |
| !! | AACCGTTTGGTCTTAATGGC+TGG | + | chr7.4:4783721-4783740 | None:intergenic | 45.0% |
| !! | ACCGTTTGGTCTTAATGGCT+GGG | + | chr7.4:4783720-4783739 | None:intergenic | 45.0% |
| !! | AGTGGTGCAGATGCTTTTTG+AGG | + | chr7.4:4783191-4783210 | None:intergenic | 45.0% |
| !! | GATTGCGGTAGAAGTTGATG+TGG | - | chr7.4:4782428-4782447 | MS.gene072590:CDS | 45.0% |
| AACAACCCCTGCTGGTAGAT+CGG | - | chr7.4:4784450-4784469 | MS.gene072590:intron | 50.0% | |
| ACACCTCAAAGCCTCGAGAA+AGG | + | chr7.4:4782642-4782661 | None:intergenic | 50.0% | |
| ACCACTCAAGGCTATCCACA+TGG | - | chr7.4:4784028-4784047 | MS.gene072590:intron | 50.0% | |
| ACCTACACACTCGACAGCAA+TGG | - | chr7.4:4784063-4784082 | MS.gene072590:intron | 50.0% | |
| ACCTCCTCATTCGCAGTTGA+TGG | + | chr7.4:4783148-4783167 | None:intergenic | 50.0% | |
| ATTGGCGCGCTCAAAGTTTG+TGG | + | chr7.4:4783597-4783616 | None:intergenic | 50.0% | |
| CCTACACACTCGACAGCAAT+GGG | - | chr7.4:4784064-4784083 | MS.gene072590:intron | 50.0% | |
| CCTTGTCGACATGCTGTTCT+GGG | - | chr7.4:4783055-4783074 | MS.gene072590:CDS | 50.0% | |
| CGAAGTAAGTTCGTTACCGG+CGG | + | chr7.4:4782136-4782155 | None:intergenic | 50.0% | |
| CTCTTAGCTGCTGCAACTAG+TGG | + | chr7.4:4783209-4783228 | None:intergenic | 50.0% | |
| CTGAGTCAAACCCCGATTCA+GGG | - | chr7.4:4784747-4784766 | MS.gene072590:CDS | 50.0% | |
| CTGCGCAATTGCATGTGGAT+CGG | + | chr7.4:4781980-4781999 | None:intergenic | 50.0% | |
| CTTCCTTTCTCGAGGCTTTG+AGG | - | chr7.4:4782636-4782655 | MS.gene072590:CDS | 50.0% | |
| GAAGTAAGTTCGTTACCGGC+GGG | + | chr7.4:4782135-4782154 | None:intergenic | 50.0% | |
| GCGGGGGTTATGACCATTAT+TGG | + | chr7.4:4783903-4783922 | None:intergenic | 50.0% | |
| GGCGAAGATATCGGTATGGT+GGG | - | chr7.4:4781924-4781943 | MS.gene072590:CDS | 50.0% | |
| GGTGCAAAAGGAGGTTGCAA+TGG | + | chr7.4:4783746-4783765 | None:intergenic | 50.0% | |
| GTCAGAAGTCACCCCTGAAT+CGG | + | chr7.4:4784762-4784781 | None:intergenic | 50.0% | |
| GTGCATAGCAGTACCACTCA+AGG | - | chr7.4:4784016-4784035 | MS.gene072590:intron | 50.0% | |
| TACAGACGCAGGTATACGAG+TGG | + | chr7.4:4782070-4782089 | None:intergenic | 50.0% | |
| TATTGCCGATCTACCAGCAG+GGG | + | chr7.4:4784458-4784477 | None:intergenic | 50.0% | |
| TCAGAAGTCACCCCTGAATC+GGG | + | chr7.4:4784761-4784780 | None:intergenic | 50.0% | |
| TCCATCAACTGCGAATGAGG+AGG | - | chr7.4:4783144-4783163 | MS.gene072590:CDS | 50.0% | |
| TCCTTGTCGACATGCTGTTC+TGG | - | chr7.4:4783054-4783073 | MS.gene072590:CDS | 50.0% | |
| TGAGTCAAACCCCGATTCAG+GGG | - | chr7.4:4784748-4784767 | MS.gene072590:CDS | 50.0% | |
| TGGACTACTCTCTTAGCTGG+AGG | - | chr7.4:4783239-4783258 | MS.gene072590:CDS | 50.0% | |
| TTGTTGCCAACAGTCCTAGG+TGG | + | chr7.4:4783818-4783837 | None:intergenic | 50.0% | |
| ! | ACCATGTGGATAGCCTTGAG+TGG | + | chr7.4:4784032-4784051 | None:intergenic | 50.0% |
| ! | GGAAGTGGAGCACTACTCTT+AGG | + | chr7.4:4783962-4783981 | None:intergenic | 50.0% |
| ! | GTATCACCACTGGTTAGTGG+AGG | + | chr7.4:4783266-4783285 | None:intergenic | 50.0% |
| ! | GTCTGAGCAGCATTTGAGAC+AGG | + | chr7.4:4783341-4783360 | None:intergenic | 50.0% |
| ! | TCGGTCCATTTGGTTGACTC+GGG | + | chr7.4:4783472-4783491 | None:intergenic | 50.0% |
| ! | TGACTCGGGTTTCTCCAAGT+TGG | + | chr7.4:4783458-4783477 | None:intergenic | 50.0% |
| ! | TGTGTGTTGCTGTGATTGCG+CGG | - | chr7.4:4782484-4782503 | MS.gene072590:CDS | 50.0% |
| !! | AACATCGGTGTTGCGATGCT+TGG | + | chr7.4:4784260-4784279 | None:intergenic | 50.0% |
| !! | ACATCGGTGTTGCGATGCTT+GGG | + | chr7.4:4784259-4784278 | None:intergenic | 50.0% |
| !! | CCTCATTCGCAGTTGATGGA+GGG | + | chr7.4:4783144-4783163 | None:intergenic | 50.0% |
| !! | GAAAGCTCTGGAGAGTGCTA+TGG | - | chr7.4:4784282-4784301 | MS.gene072590:intron | 50.0% |
| !! | TATACGAGTGGTGTCACCGT+AGG | + | chr7.4:4782058-4782077 | None:intergenic | 50.0% |
| !! | TCCTCATTCGCAGTTGATGG+AGG | + | chr7.4:4783145-4783164 | None:intergenic | 50.0% |
| ACCGTAGGCGGAGATGGAAA+CGG | + | chr7.4:4782043-4782062 | None:intergenic | 55.0% | |
| AGGTGGAGCGACAACTAACG+CGG | - | chr7.4:4781885-4781904 | MS.gene072590:CDS | 55.0% | |
| CAGAAGTCACCCCTGAATCG+GGG | + | chr7.4:4784760-4784779 | None:intergenic | 55.0% | |
| CCCAGAACAGCATGTCGACA+AGG | + | chr7.4:4783058-4783077 | None:intergenic | 55.0% | |
| CCCATTGCTGTCGAGTGTGT+AGG | + | chr7.4:4784067-4784086 | None:intergenic | 55.0% | |
| CCCTCCATCAACTGCGAATG+AGG | - | chr7.4:4783141-4783160 | MS.gene072590:CDS | 55.0% | |
| CCTGAATCGGGGTTTGACTC+AGG | + | chr7.4:4784749-4784768 | None:intergenic | 55.0% | |
| CCTGAGTCAAACCCCGATTC+AGG | - | chr7.4:4784746-4784765 | MS.gene072590:CDS | 55.0% | |
| CGACGGCGAAGATATCGGTA+TGG | - | chr7.4:4781920-4781939 | MS.gene072590:CDS | 55.0% | |
| CGGCGAAGATATCGGTATGG+TGG | - | chr7.4:4781923-4781942 | MS.gene072590:CDS | 55.0% | |
| CTGCTCAGACACAGCAACAG+GGG | - | chr7.4:4783351-4783370 | MS.gene072590:CDS | 55.0% | |
| GAGTGCTATGGAGCAGCAGA+TGG | - | chr7.4:4784294-4784313 | MS.gene072590:intron | 55.0% | |
| GCATGTGGATCGGAGCCTTT+AGG | + | chr7.4:4781970-4781989 | None:intergenic | 55.0% | |
| GCTGCTCAGACACAGCAACA+GGG | - | chr7.4:4783350-4783369 | MS.gene072590:CDS | 55.0% | |
| TCTTGAAGTCCAACTGGGGG+TGG | + | chr7.4:4783506-4783525 | None:intergenic | 55.0% | |
| TGCTATGGAGCAGCAGATGG+TGG | - | chr7.4:4784297-4784316 | MS.gene072590:intron | 55.0% | |
| TGCTCAGACACAGCAACAGG+GGG | - | chr7.4:4783352-4783371 | MS.gene072590:CDS | 55.0% | |
| TGCTGCTCAGACACAGCAAC+AGG | - | chr7.4:4783349-4783368 | MS.gene072590:CDS | 55.0% | |
| ! | GGGGGTGGATTCATGGCTTT+CGG | + | chr7.4:4783491-4783510 | None:intergenic | 55.0% |
| ! | GTGTGTTGCTGTGATTGCGC+GGG | - | chr7.4:4782485-4782504 | MS.gene072590:CDS | 55.0% |
| ! | TCCAACTGGGGGTGGATTCA+TGG | + | chr7.4:4783498-4783517 | None:intergenic | 55.0% |
| ACTCCGTTGCGGAACAGTGC+GGG | + | chr7.4:4783921-4783940 | None:intergenic | 60.0% | |
| CACTCCGTTGCGGAACAGTG+CGG | + | chr7.4:4783922-4783941 | None:intergenic | 60.0% | |
| CCAACAGTCCTAGGTGGCAC+CGG | + | chr7.4:4783812-4783831 | None:intergenic | 60.0% | |
| CCCGTTTCCATCTCCGCCTA+CGG | - | chr7.4:4782039-4782058 | MS.gene072590:CDS | 60.0% | |
| CCGTAGGCGGAGATGGAAAC+GGG | + | chr7.4:4782042-4782061 | None:intergenic | 60.0% | |
| GCCATGAATCCACCCCCAGT+TGG | - | chr7.4:4783494-4783513 | MS.gene072590:CDS | 60.0% | |
| GCTCAGACACAGCAACAGGG+GGG | - | chr7.4:4783353-4783372 | MS.gene072590:CDS | 60.0% | |
| GGAGGACCTCCACTAACCAG+TGG | - | chr7.4:4783257-4783276 | MS.gene072590:CDS | 60.0% | |
| TGGAGCGACAACTAACGCGG+AGG | - | chr7.4:4781888-4781907 | MS.gene072590:CDS | 60.0% | |
| ! | CAGCACGCGCTTTCTAGCAC+CGG | - | chr7.4:4782090-4782109 | MS.gene072590:intron | 60.0% |
| ! | CGACATGCTGTTCTGGGCAG+TGG | - | chr7.4:4783061-4783080 | MS.gene072590:CDS | 60.0% |
| !! | ACGAGTGGTGTCACCGTAGG+CGG | + | chr7.4:4782055-4782074 | None:intergenic | 60.0% |
| !! | CAACTACACCGGTGCCACCT+AGG | - | chr7.4:4783801-4783820 | MS.gene072590:intron | 60.0% |
| ACCCCCGCACTGTTCCGCAA+CGG | - | chr7.4:4783915-4783934 | MS.gene072590:intron | 65.0% | |
| AGCGCGTGCTGTACAGACGC+AGG | + | chr7.4:4782081-4782100 | None:intergenic | 65.0% | |
| CGCACTGTTCCGCAACGGAG+TGG | - | chr7.4:4783920-4783939 | MS.gene072590:intron | 65.0% | |
| CTCCGTTGCGGAACAGTGCG+GGG | + | chr7.4:4783920-4783939 | None:intergenic | 65.0% | |
| TCCGTTGCGGAACAGTGCGG+GGG | + | chr7.4:4783919-4783938 | None:intergenic | 65.0% | |
| ! | CGCGGAGGCGCAGTATACGA+CGG | - | chr7.4:4781903-4781922 | MS.gene072590:CDS | 65.0% |
| ! | GGTGTCACCGTAGGCGGAGA+TGG | + | chr7.4:4782049-4782068 | None:intergenic | 65.0% |
| !! | CCGGTGCCACCTAGGACTGT+TGG | - | chr7.4:4783809-4783828 | MS.gene072590:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 4781877 | 4784787 | 4781877 | ID=MS.gene072590 |
| chr7.4 | mRNA | 4781877 | 4784787 | 4781877 | ID=MS.gene072590.t1;Parent=MS.gene072590 |
| chr7.4 | exon | 4784526 | 4784787 | 4784526 | ID=MS.gene072590.t1.exon1;Parent=MS.gene072590.t1 |
| chr7.4 | CDS | 4784526 | 4784787 | 4784526 | ID=cds.MS.gene072590.t1;Parent=MS.gene072590.t1 |
| chr7.4 | exon | 4782170 | 4783637 | 4782170 | ID=MS.gene072590.t1.exon2;Parent=MS.gene072590.t1 |
| chr7.4 | CDS | 4782170 | 4783637 | 4782170 | ID=cds.MS.gene072590.t1;Parent=MS.gene072590.t1 |
| chr7.4 | exon | 4781877 | 4782063 | 4781877 | ID=MS.gene072590.t1.exon3;Parent=MS.gene072590.t1 |
| chr7.4 | CDS | 4781877 | 4782063 | 4781877 | ID=cds.MS.gene072590.t1;Parent=MS.gene072590.t1 |
| Gene Sequence |
| Protein sequence |
