AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072683

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072683.t1 MTR_7g109800 96.949 295 8 1 1 295 2 295 0.0 591
MS.gene072683.t1 MTR_1g086790 61.290 310 75 17 20 295 27 325 6.17e-93 278
MS.gene072683.t1 MTR_2g033820 40.909 308 128 11 34 295 73 372 2.72e-43 152
MS.gene072683.t1 MTR_5g043880 46.561 189 70 5 118 291 98 270 6.26e-41 143
MS.gene072683.t1 MTR_4g094588 48.276 174 71 6 131 292 165 331 1.20e-39 141
MS.gene072683.t1 MTR_5g091390 47.879 165 74 3 131 289 144 302 2.81e-39 140
MS.gene072683.t1 MTR_4g122530 65.854 82 28 0 128 209 192 273 3.86e-35 131
MS.gene072683.t1 MTR_3g104750 62.821 78 29 0 124 201 84 161 1.29e-31 115
MS.gene072683.t1 MTR_7g079010 46.528 144 55 3 67 201 68 198 1.98e-31 117
MS.gene072683.t1 MTR_7g011820 43.976 166 77 5 67 217 318 482 2.38e-31 122
MS.gene072683.t1 MTR_7g011820 44.681 94 36 2 129 207 198 290 7.20e-16 77.8
MS.gene072683.t1 MTR_7g028415 72.464 69 19 0 133 201 82 150 3.13e-31 115
MS.gene072683.t1 MTR_7g028710 72.464 69 19 0 133 201 82 150 3.13e-31 115
MS.gene072683.t1 MTR_5g042920 59.524 84 34 0 129 212 305 388 3.71e-30 118
MS.gene072683.t1 MTR_5g042920 61.290 62 21 2 144 203 151 211 7.14e-17 80.9
MS.gene072683.t1 MTR_1g015140 61.250 80 31 0 123 202 81 160 1.92e-29 110
MS.gene072683.t1 MTR_5g094430 60.227 88 34 1 128 215 214 300 1.99e-29 115
MS.gene072683.t1 MTR_5g094430 38.776 147 82 5 145 288 67 208 1.51e-17 82.4
MS.gene072683.t1 MTR_5g094430 60.227 88 34 1 128 215 236 322 2.52e-29 115
MS.gene072683.t1 MTR_5g094430 38.776 147 82 5 145 288 89 230 1.51e-17 82.8
MS.gene072683.t1 MTR_5g094430 60.227 88 34 1 128 215 348 434 4.74e-29 116
MS.gene072683.t1 MTR_5g094430 38.776 147 82 5 145 288 201 342 3.59e-17 82.0
MS.gene072683.t1 MTR_8g092010 42.424 132 69 2 80 209 47 173 5.58e-29 109
MS.gene072683.t1 MTR_4g082580 45.968 124 63 1 90 209 220 343 8.57e-29 114
MS.gene072683.t1 MTR_4g082580 53.125 64 30 0 144 207 145 208 1.22e-15 77.0
MS.gene072683.t1 MTR_3g009470 62.069 87 32 1 128 214 479 564 1.16e-28 115
MS.gene072683.t1 MTR_3g009470 58.209 67 27 1 144 210 280 345 3.91e-17 82.0
MS.gene072683.t1 MTR_3g095080 46.281 121 59 1 86 200 80 200 1.33e-28 109
MS.gene072683.t1 MTR_3g095080 46.281 121 59 1 86 200 104 224 1.66e-28 110
MS.gene072683.t1 MTR_8g007270 46.218 119 60 2 86 200 92 210 4.24e-28 108
MS.gene072683.t1 MTR_3g056100 59.756 82 33 0 128 209 242 323 4.59e-28 112
MS.gene072683.t1 MTR_3g056100 57.812 64 26 1 144 207 99 161 6.82e-16 77.8
MS.gene072683.t1 MTR_3g056100 59.756 82 33 0 128 209 255 336 5.02e-28 112
MS.gene072683.t1 MTR_3g056100 57.812 64 26 1 144 207 99 161 6.32e-16 77.8
MS.gene072683.t1 MTR_3g056100 59.756 82 33 0 128 209 399 480 1.06e-27 112
MS.gene072683.t1 MTR_3g056100 57.812 64 26 1 144 207 243 305 6.85e-16 78.2
MS.gene072683.t1 MTR_3g056100 59.756 82 33 0 128 209 386 467 1.10e-27 112
MS.gene072683.t1 MTR_3g056100 57.812 64 26 1 144 207 243 305 7.29e-16 78.2
MS.gene072683.t1 MTR_7g100510 60.526 76 30 0 129 204 346 421 1.92e-27 110
MS.gene072683.t1 MTR_7g100510 52.055 73 34 1 145 217 190 261 5.37e-17 81.3
MS.gene072683.t1 MTR_3g031220 44.776 134 60 2 83 203 292 424 1.01e-26 109
MS.gene072683.t1 MTR_3g031220 54.688 64 28 1 144 207 198 260 6.32e-16 78.2
MS.gene072683.t1 MTR_8g092140 63.514 74 26 1 128 200 143 216 1.31e-26 104
MS.gene072683.t1 MTR_7g071120 56.098 82 36 0 128 209 308 389 3.81e-26 107
MS.gene072683.t1 MTR_7g071120 48.315 89 38 2 144 232 166 246 6.61e-18 84.0
MS.gene072683.t1 MTR_4g013260 58.442 77 32 0 128 204 320 396 4.15e-26 107
MS.gene072683.t1 MTR_4g013260 47.778 90 41 2 144 231 184 269 1.73e-18 85.5
MS.gene072683.t1 MTR_5g074400 57.831 83 35 0 128 210 404 486 5.52e-26 107
MS.gene072683.t1 MTR_5g074400 55.000 60 26 1 144 203 243 301 1.60e-14 73.9
MS.gene072683.t1 MTR_7g080020 59.211 76 31 0 128 203 477 552 2.24e-25 106
MS.gene072683.t1 MTR_7g080020 58.209 67 27 1 144 210 280 345 1.04e-16 80.9
MS.gene072683.t1 MTR_1g077780 51.899 79 38 0 125 203 43 121 4.30e-25 98.2
MS.gene072683.t1 MTR_3g095040 52.632 76 36 0 131 206 105 180 9.38e-25 99.0
MS.gene072683.t1 MTR_7g080000 57.895 76 32 0 128 203 416 491 1.01e-24 104
MS.gene072683.t1 MTR_7g080000 54.412 68 30 1 143 210 233 299 2.29e-15 76.6
MS.gene072683.t1 MTR_8g096730 49.451 91 40 2 117 201 37 127 1.32e-24 97.1
MS.gene072683.t1 MTR_7g062220 40.132 152 77 5 144 288 124 268 1.65e-23 98.2
MS.gene072683.t1 MTR_4g132430 50.649 77 37 1 128 203 111 187 1.58e-22 96.3
MS.gene072683.t1 MTR_2g023930 53.247 77 35 1 128 203 289 365 2.47e-22 97.1
MS.gene072683.t1 MTR_4g132430 50.649 77 37 1 128 203 245 321 4.33e-22 96.3
MS.gene072683.t1 MTR_2g105060 49.383 81 38 2 126 203 74 154 4.58e-22 92.8
MS.gene072683.t1 MTR_1g009613 36.364 143 85 5 63 200 178 319 6.16e-22 94.4
MS.gene072683.t1 MTR_2g105060 49.383 81 38 2 126 203 149 229 9.25e-22 93.6
MS.gene072683.t1 MTR_7g110720 45.652 92 45 2 128 214 200 291 1.67e-21 94.0
MS.gene072683.t1 MTR_5g097490 56.000 75 33 0 129 203 237 311 1.72e-21 93.6
MS.gene072683.t1 MTR_5g097490 50.000 60 29 1 144 203 92 150 5.05e-11 63.2
MS.gene072683.t1 MTR_7g110720 45.652 92 45 2 128 214 173 264 1.85e-21 93.6
MS.gene072683.t1 MTR_5g016610 48.193 83 42 1 119 200 174 256 2.26e-21 91.7
MS.gene072683.t1 MTR_2g088000 45.652 92 44 2 128 213 333 424 2.33e-21 94.4
MS.gene072683.t1 MTR_3g053330 43.617 94 50 2 128 218 235 328 3.49e-21 93.6
MS.gene072683.t1 MTR_4g094412 48.718 78 39 1 128 204 218 295 4.20e-21 93.2
MS.gene072683.t1 MTR_4g094412 48.718 78 39 1 128 204 227 304 4.48e-21 93.2
MS.gene072683.t1 MTR_4g130900 38.655 119 73 0 86 204 301 419 8.05e-21 92.4
MS.gene072683.t1 MTR_2g045360 38.158 152 72 7 128 273 195 330 9.14e-21 92.0
MS.gene072683.t1 MTR_6g086555 40.196 102 50 2 131 221 193 294 1.26e-20 91.3
MS.gene072683.t1 MTR_4g107970 41.748 103 51 2 103 204 145 239 3.61e-20 90.9
MS.gene072683.t1 MTR_4g107970 41.748 103 51 2 103 204 222 316 4.01e-20 90.9
MS.gene072683.t1 MTR_1g078260 48.750 80 39 2 131 209 234 312 2.07e-19 88.2
MS.gene072683.t1 MTR_4g049790 44.944 89 44 2 129 212 297 385 7.22e-19 87.0
MS.gene072683.t1 MTR_4g094908 47.619 84 42 2 119 200 240 323 7.23e-19 85.5
MS.gene072683.t1 MTR_7g009730 41.237 97 48 2 106 201 189 277 9.26e-19 86.7
MS.gene072683.t1 MTR_4g007060 43.878 98 44 4 125 211 99 196 1.23e-18 84.3
MS.gene072683.t1 MTR_4g049760 42.697 89 46 2 129 212 275 363 1.72e-18 85.9
MS.gene072683.t1 MTR_4g007060 43.878 98 44 4 125 211 133 230 1.84e-18 84.3
MS.gene072683.t1 MTR_4g127040 40.449 89 52 1 119 206 220 308 2.29e-18 84.0
MS.gene072683.t1 MTR_1g013760 55.000 60 26 1 142 200 138 197 2.79e-18 83.2
MS.gene072683.t1 MTR_8g028565 40.206 97 56 2 109 203 119 215 4.09e-18 83.6
MS.gene072683.t1 MTR_3g106060 50.000 72 33 2 142 210 136 207 1.15e-17 81.6
MS.gene072683.t1 MTR_7g109600 47.761 67 34 1 145 210 54 120 2.05e-17 80.5
MS.gene072683.t1 MTR_7g079040 45.679 81 42 2 145 223 155 235 3.38e-17 80.9
MS.gene072683.t1 MTR_1g070455 45.946 74 39 1 128 200 277 350 3.57e-17 81.3
MS.gene072683.t1 MTR_3g009470 58.209 67 27 1 144 210 280 345 3.68e-17 81.6
MS.gene072683.t1 MTR_8g087000 41.860 86 48 2 145 229 78 162 4.36e-17 79.3
MS.gene072683.t1 MTR_8g087000 41.860 86 48 2 145 229 77 161 4.65e-17 79.0
MS.gene072683.t1 MTR_8g098945 46.154 78 40 2 143 218 128 205 1.08e-16 78.6
MS.gene072683.t1 MTR_3g108960 46.341 82 42 2 120 200 291 371 1.14e-16 80.1
MS.gene072683.t1 MTR_2g032030 55.000 60 26 1 145 203 268 327 1.41e-16 80.1
MS.gene072683.t1 MTR_2g032030 55.000 60 26 1 145 203 268 327 1.72e-16 79.7
MS.gene072683.t1 MTR_1g013790 44.872 78 40 2 143 217 100 177 2.65e-16 77.4
MS.gene072683.t1 MTR_3g031220 54.688 64 28 1 144 207 198 260 3.04e-16 78.6
MS.gene072683.t1 MTR_8g099350 36.296 135 76 5 72 199 59 190 2.56e-15 75.9
MS.gene072683.t1 MTR_2g016770 50.000 60 29 1 145 203 36 95 5.57e-15 72.8
MS.gene072683.t1 MTR_2g016770 50.000 60 29 1 145 203 28 87 6.36e-15 72.4
MS.gene072683.t1 MTR_5g029850 62.295 61 22 1 101 161 9 68 7.74e-15 68.6
MS.gene072683.t1 MTR_5g074200 43.158 95 47 3 144 232 220 313 1.20e-14 73.6
MS.gene072683.t1 MTR_7g117200 40.206 97 54 2 106 199 81 176 1.24e-14 73.6
MS.gene072683.t1 MTR_0117s0040 39.806 103 54 3 99 200 36 131 2.36e-14 71.6
MS.gene072683.t1 MTR_2g024380 30.597 134 90 2 75 207 184 315 4.52e-14 72.4
MS.gene072683.t1 MTR_2g083870 50.820 61 29 1 145 204 81 141 4.90e-14 70.9
MS.gene072683.t1 MTR_1g099600 50.000 60 29 1 145 203 186 245 7.23e-14 71.2
MS.gene072683.t1 MTR_8g027860 41.176 85 46 2 118 199 111 194 1.04e-13 70.9
MS.gene072683.t1 MTR_2g075750 50.000 60 27 1 143 199 27 86 1.30e-13 68.2
MS.gene072683.t1 MTR_8g067650 40.230 87 50 2 125 209 319 405 1.74e-13 70.9
MS.gene072683.t1 MTR_3g090860 51.667 60 26 1 143 199 132 191 1.80e-13 70.1
MS.gene072683.t1 MTR_8g069935 38.298 94 56 2 118 209 304 397 2.09e-13 70.5
MS.gene072683.t1 MTR_2g075610 50.847 59 26 1 143 198 28 86 2.70e-13 67.4
MS.gene072683.t1 MTR_2g075680 40.000 90 46 2 118 199 117 206 3.15e-13 69.3
MS.gene072683.t1 MTR_2g075700 48.333 60 28 1 143 199 143 202 4.20e-13 68.9
MS.gene072683.t1 MTR_5g097500 42.667 75 43 0 129 203 215 289 5.89e-13 68.6
MS.gene072683.t1 MTR_2g024350 45.902 61 32 1 144 203 8 68 6.35e-13 67.4
MS.gene072683.t1 MTR_7g073430 50.847 59 26 1 144 199 122 180 7.19e-13 67.8
MS.gene072683.t1 MTR_4g047580 37.500 80 49 1 129 207 266 345 7.98e-13 68.9
MS.gene072683.t1 MTR_8g067635 47.761 67 34 1 144 209 349 415 1.21e-12 68.2
MS.gene072683.t1 MTR_5g067680 38.000 100 51 2 144 240 202 293 1.91e-12 67.4
MS.gene072683.t1 MTR_8g032510 39.560 91 47 3 119 203 96 184 3.70e-12 65.9
MS.gene072683.t1 MTR_7g073380 46.667 60 29 1 143 199 122 181 9.19e-12 64.7
MS.gene072683.t1 MTR_5g044695 53.488 43 20 0 128 170 61 103 1.75e-11 60.5
MS.gene072683.t1 MTR_5g067700 34.821 112 64 4 118 222 82 191 3.15e-11 62.4
MS.gene072683.t1 MTR_5g018380 44.068 59 31 1 143 201 122 178 4.18e-11 61.2
MS.gene072683.t1 MTR_8g092010 34.409 93 54 2 80 170 47 134 6.38e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072683.t1 AT2G47260 53.361 238 84 6 82 295 103 337 4.69e-62 200
MS.gene072683.t1 AT1G29860 48.295 176 69 3 128 295 120 281 2.39e-46 157
MS.gene072683.t1 AT3G62340 36.697 327 124 14 1 295 1 276 3.94e-46 157
MS.gene072683.t1 AT4G18170 69.388 98 29 1 111 207 138 235 9.99e-44 152
MS.gene072683.t1 AT5G49520 48.469 196 77 5 116 291 193 384 5.64e-43 152
MS.gene072683.t1 AT1G69310 46.286 175 84 3 117 291 120 284 4.38e-41 144
MS.gene072683.t1 AT1G69310 46.286 175 84 3 117 291 120 284 4.38e-41 144
MS.gene072683.t1 AT1G69310 46.286 175 84 3 117 291 120 284 4.38e-41 144
MS.gene072683.t1 AT5G46350 45.455 165 81 2 131 295 170 325 5.15e-39 139
MS.gene072683.t1 AT1G69310 44.000 175 84 4 117 291 120 280 1.57e-35 129
MS.gene072683.t1 AT5G13080 70.423 71 21 0 131 201 54 124 4.15e-31 114
MS.gene072683.t1 AT2G03340 42.177 147 79 3 70 213 341 484 5.60e-31 121
MS.gene072683.t1 AT2G03340 60.000 60 23 1 144 203 250 308 3.29e-16 79.0
MS.gene072683.t1 AT3G01970 69.014 71 22 0 130 200 51 121 6.86e-31 113
MS.gene072683.t1 AT5G41570 59.140 93 35 2 110 201 65 155 1.18e-30 114
MS.gene072683.t1 AT1G13960 61.538 91 35 0 129 219 241 331 2.45e-30 117
MS.gene072683.t1 AT1G13960 60.000 60 23 1 144 203 76 134 2.19e-16 79.0
MS.gene072683.t1 AT4G39410 55.238 105 45 2 117 220 195 298 6.83e-30 115
MS.gene072683.t1 AT1G13960 68.056 72 23 0 129 200 394 465 7.28e-30 118
MS.gene072683.t1 AT1G13960 60.000 60 23 1 144 203 229 287 1.97e-16 79.7
MS.gene072683.t1 AT1G64000 69.014 71 22 0 131 201 101 171 1.24e-29 111
MS.gene072683.t1 AT5G07100 44.800 125 68 1 85 208 81 205 2.30e-29 111
MS.gene072683.t1 AT5G07100 49.275 69 35 0 144 212 24 92 1.68e-15 74.3
MS.gene072683.t1 AT5G07100 44.800 125 68 1 85 208 81 205 2.30e-29 111
MS.gene072683.t1 AT5G07100 49.275 69 35 0 144 212 24 92 1.68e-15 74.3
MS.gene072683.t1 AT5G07100 44.800 125 68 1 85 208 81 205 2.30e-29 111
MS.gene072683.t1 AT5G07100 49.275 69 35 0 144 212 24 92 1.68e-15 74.3
MS.gene072683.t1 AT5G07100 44.800 125 68 1 85 208 81 205 2.30e-29 111
MS.gene072683.t1 AT5G07100 49.275 69 35 0 144 212 24 92 1.68e-15 74.3
MS.gene072683.t1 AT2G44745 52.941 102 47 1 99 200 101 201 4.30e-29 110
MS.gene072683.t1 AT4G26640 42.763 152 79 3 66 210 120 270 6.12e-29 114
MS.gene072683.t1 AT4G26640 54.930 71 31 1 144 214 35 104 1.95e-16 79.3
MS.gene072683.t1 AT4G26640 42.763 152 79 3 66 210 120 270 6.12e-29 114
MS.gene072683.t1 AT4G26640 54.930 71 31 1 144 214 35 104 1.95e-16 79.3
MS.gene072683.t1 AT4G26640 42.763 152 79 3 66 210 120 270 6.12e-29 114
MS.gene072683.t1 AT4G26640 54.930 71 31 1 144 214 35 104 1.95e-16 79.3
MS.gene072683.t1 AT4G26640 42.763 152 79 3 66 210 120 270 6.12e-29 114
MS.gene072683.t1 AT4G26640 54.930 71 31 1 144 214 35 104 1.95e-16 79.3
MS.gene072683.t1 AT5G07100 44.800 125 68 1 85 208 174 298 6.97e-29 112
MS.gene072683.t1 AT5G07100 49.275 69 35 0 144 212 117 185 3.28e-15 75.1
MS.gene072683.t1 AT2G46130 62.338 77 29 0 125 201 11 87 8.91e-29 106
MS.gene072683.t1 AT4G26640 42.763 152 79 3 66 210 224 374 1.29e-28 114
MS.gene072683.t1 AT4G26640 54.930 71 31 1 144 214 139 208 2.88e-16 79.0
MS.gene072683.t1 AT4G26640 42.763 152 79 3 66 210 256 406 1.35e-28 114
MS.gene072683.t1 AT4G26640 54.930 71 31 1 144 214 171 240 3.24e-16 79.0
MS.gene072683.t1 AT4G26640 42.763 152 79 3 66 210 296 446 1.58e-28 115
MS.gene072683.t1 AT4G26640 54.930 71 31 1 144 214 211 280 3.05e-16 79.3
MS.gene072683.t1 AT3G01080 55.056 89 40 0 115 203 315 403 5.28e-28 112
MS.gene072683.t1 AT3G01080 52.941 68 31 1 144 211 205 271 7.73e-16 77.8
MS.gene072683.t1 AT3G01080 55.056 89 40 0 115 203 277 365 7.04e-28 112
MS.gene072683.t1 AT3G01080 52.941 68 31 1 144 211 167 233 9.29e-16 77.4
MS.gene072683.t1 AT2G38470 56.818 88 38 0 125 212 343 430 1.71e-27 111
MS.gene072683.t1 AT2G38470 43.137 102 55 3 103 203 143 242 1.18e-15 77.4
MS.gene072683.t1 AT4G26440 59.551 89 35 1 128 216 356 443 3.44e-27 111
MS.gene072683.t1 AT4G26440 49.315 73 36 1 144 216 178 249 3.42e-15 76.3
MS.gene072683.t1 AT5G26170 60.563 71 28 0 130 200 99 169 3.66e-27 104
MS.gene072683.t1 AT5G56270 61.842 76 29 0 128 203 471 546 2.97e-26 108
MS.gene072683.t1 AT5G56270 55.224 67 29 1 144 210 273 338 2.36e-15 76.6
MS.gene072683.t1 AT2G04880 61.333 75 29 0 129 203 268 342 3.97e-26 107
MS.gene072683.t1 AT2G04880 56.452 62 26 1 143 204 110 170 3.54e-16 79.0
MS.gene072683.t1 AT2G04880 61.333 75 29 0 129 203 292 366 4.76e-26 107
MS.gene072683.t1 AT2G04880 56.452 62 26 1 143 204 110 170 3.76e-16 79.0
MS.gene072683.t1 AT5G64810 50.000 82 41 0 119 200 85 166 2.03e-25 100
MS.gene072683.t1 AT2G21900 51.765 85 36 2 124 203 84 168 9.54e-25 99.0
MS.gene072683.t1 AT1G55600 42.991 107 57 1 97 203 264 366 9.97e-25 103
MS.gene072683.t1 AT2G37260 46.018 113 46 2 120 232 246 343 1.14e-24 102
MS.gene072683.t1 AT2G37260 44.792 96 48 3 145 236 86 180 3.01e-16 78.2
MS.gene072683.t1 AT2G37260 46.018 113 46 2 120 232 244 341 1.18e-24 102
MS.gene072683.t1 AT2G37260 44.792 96 48 3 145 236 84 178 3.20e-16 78.2
MS.gene072683.t1 AT2G37260 46.018 113 46 2 120 232 326 423 2.76e-24 102
MS.gene072683.t1 AT2G37260 33.152 184 108 6 67 236 78 260 1.36e-16 79.7
MS.gene072683.t1 AT4G04450 48.936 94 45 2 128 218 182 275 9.53e-24 100
MS.gene072683.t1 AT2G30250 54.878 82 37 0 128 209 312 393 2.02e-23 99.4
MS.gene072683.t1 AT2G30250 39.815 108 58 2 145 246 167 273 3.97e-13 69.3
MS.gene072683.t1 AT2G46130 57.143 77 29 1 125 201 11 83 2.52e-23 92.4
MS.gene072683.t1 AT4G04450 48.936 94 45 2 128 218 276 369 2.75e-23 99.8
MS.gene072683.t1 AT1G68150 30.220 182 110 4 40 204 115 296 2.98e-23 98.6
MS.gene072683.t1 AT1G62300 47.619 84 43 1 121 203 289 372 3.44e-21 94.0
MS.gene072683.t1 AT2G30590 47.619 84 43 1 119 201 288 371 3.48e-21 92.8
MS.gene072683.t1 AT4G22070 50.649 77 37 1 128 203 281 357 4.44e-21 93.6
MS.gene072683.t1 AT4G22070 50.649 77 37 1 128 203 281 357 4.44e-21 93.6
MS.gene072683.t1 AT4G22070 50.649 77 37 1 128 203 281 357 4.44e-21 93.6
MS.gene072683.t1 AT4G22070 50.649 77 37 1 128 203 281 357 4.44e-21 93.6
MS.gene072683.t1 AT4G01720 50.649 77 37 1 128 203 223 299 2.34e-20 91.3
MS.gene072683.t1 AT4G31550 46.341 82 43 1 120 200 221 302 4.98e-20 89.0
MS.gene072683.t1 AT4G31800 48.000 75 38 1 143 216 110 184 1.33e-19 86.3
MS.gene072683.t1 AT4G31550 46.429 84 42 2 118 200 222 303 1.65e-19 87.4
MS.gene072683.t1 AT4G31800 48.000 75 38 1 143 216 175 249 2.50e-19 86.7
MS.gene072683.t1 AT2G25000 52.857 70 32 1 143 211 102 171 3.01e-19 84.7
MS.gene072683.t1 AT2G25000 52.857 70 32 1 143 211 102 171 3.01e-19 84.7
MS.gene072683.t1 AT1G80840 53.226 62 28 1 143 203 145 206 4.19e-19 85.9
MS.gene072683.t1 AT4G30935 56.667 60 26 0 145 204 332 391 4.21e-19 87.4
MS.gene072683.t1 AT5G43290 61.404 57 22 0 144 200 114 170 4.34e-19 85.5
MS.gene072683.t1 AT2G25000 52.857 70 32 1 143 211 124 193 5.20e-19 84.7
MS.gene072683.t1 AT1G18860 46.753 77 40 1 128 203 223 299 6.78e-19 87.0
MS.gene072683.t1 AT2G25000 52.857 70 32 1 143 211 145 214 7.96e-19 84.7
MS.gene072683.t1 AT5G15130 41.489 94 50 2 124 212 165 258 9.29e-19 86.7
MS.gene072683.t1 AT5G15130 41.489 94 50 2 124 212 207 300 9.82e-19 86.7
MS.gene072683.t1 AT1G30650 44.118 102 51 3 108 204 178 278 3.20e-18 84.7
MS.gene072683.t1 AT4G24240 44.578 83 45 1 119 200 256 338 4.33e-18 83.6
MS.gene072683.t1 AT2G23320 45.783 83 44 1 119 200 215 297 5.12e-18 83.2
MS.gene072683.t1 AT1G29280 52.381 63 29 1 145 206 75 137 7.40e-18 81.6
MS.gene072683.t1 AT2G24570 41.489 94 53 2 114 205 212 305 7.68e-18 82.4
MS.gene072683.t1 AT5G52830 47.126 87 39 3 118 203 145 225 1.05e-17 82.4
MS.gene072683.t1 AT5G28650 40.217 92 54 1 119 209 237 328 1.59e-17 81.6
MS.gene072683.t1 AT3G04670 40.217 92 54 1 119 209 237 328 1.84e-17 81.6
MS.gene072683.t1 AT4G01250 55.000 60 26 1 145 203 129 188 1.08e-16 79.0
MS.gene072683.t1 AT2G34830 55.000 60 26 1 145 203 225 284 1.55e-16 79.7
MS.gene072683.t1 AT2G34830 55.000 60 26 1 145 203 216 275 1.68e-16 79.7
MS.gene072683.t1 AT5G45050 38.462 117 65 2 96 205 987 1103 3.59e-16 79.3
MS.gene072683.t1 AT5G45050 38.462 117 65 2 96 205 1126 1242 3.63e-16 79.3
MS.gene072683.t1 AT5G45050 38.462 117 65 2 96 205 1098 1214 3.78e-16 79.3
MS.gene072683.t1 AT3G01080 58.333 60 24 1 144 203 205 263 4.21e-16 77.8
MS.gene072683.t1 AT3G58710 42.857 91 47 2 118 203 41 131 1.50e-15 75.5
MS.gene072683.t1 AT3G58710 41.000 100 53 3 110 203 31 130 1.72e-15 75.1
MS.gene072683.t1 AT1G69810 40.659 91 49 3 128 216 129 216 5.13e-15 74.7
MS.gene072683.t1 AT1G69810 40.659 91 49 3 128 216 187 274 5.67e-15 75.1
MS.gene072683.t1 AT4G23550 43.529 85 46 2 139 221 135 219 1.95e-14 72.8
MS.gene072683.t1 AT2G46400 37.079 89 53 1 117 202 77 165 1.12e-13 70.5
MS.gene072683.t1 AT1G66560 49.153 59 27 1 144 199 103 161 1.96e-13 68.9
MS.gene072683.t1 AT4G11070 41.758 91 49 2 112 199 78 167 5.49e-13 68.2
MS.gene072683.t1 AT4G11070 41.758 91 49 2 112 199 110 199 7.02e-13 68.2
MS.gene072683.t1 AT4G12020 52.542 59 27 1 145 203 469 526 9.54e-13 69.3
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 625 661 1.67e-11 65.5
MS.gene072683.t1 AT4G12020 52.542 59 27 1 145 203 469 526 9.54e-13 69.3
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 625 661 1.67e-11 65.5
MS.gene072683.t1 AT4G12020 52.542 59 27 1 145 203 469 526 9.97e-13 68.9
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 625 661 1.72e-11 65.5
MS.gene072683.t1 AT4G12020 52.542 59 27 1 145 203 469 526 1.01e-12 68.9
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 625 661 1.72e-11 65.5
MS.gene072683.t1 AT4G12020 50.000 62 30 1 142 203 466 526 1.05e-12 68.9
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 625 661 1.87e-11 65.1
MS.gene072683.t1 AT4G12020 50.000 62 30 1 142 203 466 526 1.06e-12 68.9
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 625 661 1.80e-11 65.1
MS.gene072683.t1 AT4G12020 50.000 62 30 1 142 203 466 526 1.06e-12 68.9
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 625 661 1.80e-11 65.1
MS.gene072683.t1 AT4G12020 50.000 62 30 1 142 203 466 526 1.08e-12 68.9
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 625 661 1.86e-11 65.1
MS.gene072683.t1 AT4G12020 50.000 62 30 1 142 203 466 526 1.11e-12 68.9
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 625 661 1.90e-11 65.1
MS.gene072683.t1 AT4G12020 52.542 59 27 1 145 203 402 459 1.13e-12 68.9
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 558 594 1.93e-11 65.1
MS.gene072683.t1 AT4G12020 46.377 69 36 1 142 210 466 533 1.24e-12 68.6
MS.gene072683.t1 AT4G12020 70.270 37 11 0 128 164 625 661 1.97e-11 65.1
MS.gene072683.t1 AT3G56400 38.372 86 47 2 117 199 96 178 1.83e-12 67.0
MS.gene072683.t1 AT5G24110 34.259 108 58 4 117 219 84 183 3.27e-12 66.2
MS.gene072683.t1 AT1G66550 39.535 86 40 3 145 221 104 186 5.82e-12 64.7
MS.gene072683.t1 AT2G40740 46.479 71 35 1 144 211 173 243 6.02e-12 65.5
MS.gene072683.t1 AT2G40740 46.479 71 35 1 144 211 182 252 6.25e-12 65.5
MS.gene072683.t1 AT1G66550 39.535 86 40 3 145 221 109 191 6.51e-12 64.7
MS.gene072683.t1 AT5G45260 37.349 83 49 1 124 203 1188 1270 1.96e-11 65.1
MS.gene072683.t1 AT4G23810 49.153 59 27 1 144 199 158 216 3.83e-11 63.2
MS.gene072683.t1 AT5G22570 48.276 58 27 1 145 199 111 168 4.71e-11 62.8
MS.gene072683.t1 AT2G40750 47.458 59 28 1 144 199 152 210 7.12e-11 62.4

Find 68 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAATACATTGTCGTCTT+TGG 0.201669 7.3:-5226966 MS.gene072683:CDS
AAGGAGCTTCATGGAGTTAT+TGG 0.217692 7.3:-5228261 MS.gene072683:CDS
GAAGAAGAACGGGACATAAT+TGG 0.240938 7.3:+5227103 None:intergenic
GATGCTGCTGACTATAATAT+TGG 0.280170 7.3:+5226999 None:intergenic
TTCAATACATTGTCGTCTTT+GGG 0.295835 7.3:-5226965 MS.gene072683:CDS
TGTTGAGTTGATTATTAGTT+TGG 0.336655 7.3:+5228033 None:intergenic
ATGGAGGATTATGCGAATAT+TGG 0.346590 7.3:-5228332 MS.gene072683:CDS
AATTATGTCCCGTTCTTCTT+CGG 0.363102 7.3:-5227101 MS.gene072683:CDS
GATGAAGAGTTAGGAGTGGC+AGG 0.379102 7.3:+5228110 None:intergenic
GGTTGTAAAGGAACCACCTT+TGG 0.394614 7.3:-5228186 MS.gene072683:CDS
ATCTGAAGAAAGGAGCTTCA+TGG 0.399237 7.3:-5228270 MS.gene072683:CDS
AGGAGCTTCATGGAGTTATT+GGG 0.399801 7.3:-5228260 MS.gene072683:CDS
GAACGGGACATAATTGGGTT+TGG 0.403005 7.3:+5227109 None:intergenic
AAGAAGAACGGGACATAATT+GGG 0.403962 7.3:+5227104 None:intergenic
ACGAACAGCCGAAGAAGAAC+GGG 0.413047 7.3:+5227093 None:intergenic
GAAAAGCGAGGTGGATCATC+TGG 0.414478 7.3:-5227491 MS.gene072683:CDS
GATGAAATAGATGAAGAGTT+AGG 0.420106 7.3:+5228101 None:intergenic
TATTGGACTGACCTTGGAAA+GGG 0.432987 7.3:+5227418 None:intergenic
GCTGAATGCACCACCAACTT+TGG 0.436903 7.3:-5227046 MS.gene072683:CDS
ATTATTGGGGTTAAGGTTGA+AGG 0.444402 7.3:-5227566 MS.gene072683:intron
GTAGCATTCATATTCTTTGA+AGG 0.456358 7.3:+5226938 None:intergenic
TCTTCTTCGGCTGTTCGTGC+CGG 0.460798 7.3:-5227088 MS.gene072683:CDS
CACGAACAGCCGAAGAAGAA+CGG 0.465690 7.3:+5227092 None:intergenic
AGGCCATTGTCCTGTACCCT+TGG 0.466063 7.3:+5226887 None:intergenic
TGTTCCTTCACATATGTTCA+AGG 0.476657 7.3:-5226852 MS.gene072683:CDS
TAGGTTGTTACAACAATGGC+TGG 0.477731 7.3:+5227151 None:intergenic
ATGCTGCTGACTATAATATT+GGG 0.483227 7.3:+5227000 None:intergenic
AAAGCGATTCTAGCTTCTCT+TGG 0.486828 7.3:+5227520 None:intergenic
TAGCATTCATATTCTTTGAA+GGG 0.492165 7.3:+5226939 None:intergenic
TGTTCGATTTATCTGAAGAA+AGG 0.498487 7.3:-5228280 MS.gene072683:CDS
TCAGATAAATCGAACACACT+TGG 0.510775 7.3:+5228287 None:intergenic
GAGGTGGATCATCTGGAAGA+TGG 0.513204 7.3:-5227484 MS.gene072683:CDS
ACACTTGGAAATGAGTAGCT+AGG 0.523338 7.3:+5228302 None:intergenic
CTTCACATTACATGAAACAC+TGG 0.528954 7.3:+5227201 None:intergenic
CCATTCCCATCACTCTCCAA+AGG 0.531548 7.3:+5228170 None:intergenic
CACTTGGAAATGAGTAGCTA+GGG 0.534179 7.3:+5228303 None:intergenic
TGGTGGTGGTAATAGAGATC+CGG 0.534417 7.3:+5227069 None:intergenic
ATCTGGAAGATGGGTACAGA+TGG 0.534825 7.3:-5227474 MS.gene072683:CDS
GGTGGTTCCTTTACAACCAC+AGG 0.538122 7.3:+5228191 None:intergenic
TTGATCAGAACCAAAGTTGG+TGG 0.538546 7.3:+5227036 None:intergenic
TGATTTGCCTGTGGTTGTAA+AGG 0.540038 7.3:-5228198 MS.gene072683:CDS
AACCACCTTTGGAGAGTGAT+GGG 0.545230 7.3:-5228175 MS.gene072683:CDS
AGAGACCACTTTGTAATCCA+AGG 0.545703 7.3:-5226904 MS.gene072683:CDS
AAGTTGGTGGTGCATTCAGC+TGG 0.549478 7.3:+5227049 None:intergenic
GAACCACCTTTGGAGAGTGA+TGG 0.558173 7.3:-5228176 MS.gene072683:CDS
GTGGTGCATTCAGCTGGTGG+TGG 0.564170 7.3:+5227055 None:intergenic
AAGGAACAACATCTTGAAGA+AGG 0.565496 7.3:+5226867 None:intergenic
AGGTGGATCATCTGGAAGAT+GGG 0.567407 7.3:-5227483 MS.gene072683:CDS
ACTTTGTAATCCAAGGGTAC+AGG 0.572303 7.3:-5226897 MS.gene072683:CDS
GGGTACAGATGGAGAAAGTA+CGG 0.573593 7.3:-5227463 MS.gene072683:CDS
TTCGTAGGTTGTTACAACAA+TGG 0.575559 7.3:+5227147 None:intergenic
ATATTGGACTGACCTTGGAA+AGG 0.575592 7.3:+5227417 None:intergenic
TAGTTTACTTGATTTGCCTG+TGG 0.610972 7.3:-5228207 MS.gene072683:CDS
TTGGTGGTGCATTCAGCTGG+TGG 0.617490 7.3:+5227052 None:intergenic
AATAGATGAAGAGTTAGGAG+TGG 0.618477 7.3:+5228106 None:intergenic
TCCTCCTTGAACATATGTGA+AGG 0.619921 7.3:+5226848 None:intergenic
TGTACCCTTGGATTACAAAG+TGG 0.631750 7.3:+5226899 None:intergenic
TTCCCATCACTCTCCAAAGG+TGG 0.633730 7.3:+5228173 None:intergenic
ATTGGACTGACCTTGGAAAG+GGG 0.644385 7.3:+5227419 None:intergenic
GAGACCACTTTGTAATCCAA+GGG 0.645369 7.3:-5226903 MS.gene072683:CDS
AATCCAAGGGTACAGGACAA+TGG 0.650442 7.3:-5226890 MS.gene072683:CDS
GAATGGAAAAGAGTGTTCAG+AGG 0.653706 7.3:-5228153 MS.gene072683:CDS
TCCTTCACATATGTTCAAGG+AGG 0.657130 7.3:-5226849 MS.gene072683:CDS
CGCTTTCATGACGAAAAGCG+AGG 0.659806 7.3:-5227503 MS.gene072683:CDS
CCTTTGGAGAGTGATGGGAA+TGG 0.667441 7.3:-5228170 MS.gene072683:CDS
TTTCATGACGAAAAGCGAGG+TGG 0.682863 7.3:-5227500 MS.gene072683:CDS
ATTGTTGTAACAACCTACGA+AGG 0.722353 7.3:-5227145 MS.gene072683:CDS
ATGTAATGTGAAGAAACACG+TGG 0.727622 7.3:-5227191 MS.gene072683:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAACTTTTAAAAACAAAAT+TGG + chr7.3:5227349-5227368 None:intergenic 10.0%
!!! AAACTTTTAAAAACAAAATT+GGG + chr7.3:5227348-5227367 None:intergenic 10.0%
!!! ATAAAATTATAGAAGTATAT+TGG + chr7.3:5227799-5227818 None:intergenic 10.0%
!! TTAGGTAAAACAAAAAAAAA+AGG - chr7.3:5227286-5227305 MS.gene072683:intron 15.0%
!!! AAAACAAAAAAAAAAGGTTT+TGG - chr7.3:5227292-5227311 MS.gene072683:intron 15.0%
!!! ACATTAATTTGTTTGATTTT+TGG - chr7.3:5227510-5227529 MS.gene072683:CDS 15.0%
!!! TTTTCTTATGCTTTAATAAA+GGG + chr7.3:5227874-5227893 None:intergenic 15.0%
!!! ATTTAATTTCTATGGTTTGT+GGG - chr7.3:5227592-5227611 MS.gene072683:intron 20.0%
!!! CTAGTAAGATTTAATTTCTA+TGG - chr7.3:5227584-5227603 MS.gene072683:intron 20.0%
!!! CTTTTCTTATGCTTTAATAA+AGG + chr7.3:5227875-5227894 None:intergenic 20.0%
!!! TTTTAAAAACAAAATTGGGT+AGG + chr7.3:5227344-5227363 None:intergenic 20.0%
! AAAGGAAACAAAATTGGAAA+GGG + chr7.3:5227844-5227863 None:intergenic 25.0%
! CTGTATCTATATGCATATAT+AGG - chr7.3:5227957-5227976 MS.gene072683:intron 25.0%
! GAGATTAAAGGAAACAAAAT+TGG + chr7.3:5227850-5227869 None:intergenic 25.0%
! TAAAGGAAACAAAATTGGAA+AGG + chr7.3:5227845-5227864 None:intergenic 25.0%
! TAGCATTCATATTCTTTGAA+GGG + chr7.3:5228261-5228280 None:intergenic 25.0%
! TTAATAAAGGGAGAGATTAA+AGG + chr7.3:5227862-5227881 None:intergenic 25.0%
!! GATTTAATTTCTATGGTTTG+TGG - chr7.3:5227591-5227610 MS.gene072683:intron 25.0%
!!! AAGGTTTTGGAATTTGATTA+TGG - chr7.3:5227305-5227324 MS.gene072683:intron 25.0%
!!! AGGTTTTGGAATTTGATTAT+GGG - chr7.3:5227306-5227325 MS.gene072683:intron 25.0%
!!! GAATCTCTCTCTTTTTTTTA+TGG - chr7.3:5227241-5227260 MS.gene072683:intron 25.0%
!!! TCTCTCTTTTTTTTATGGAA+GGG - chr7.3:5227246-5227265 MS.gene072683:intron 25.0%
!!! TGTTGAGTTGATTATTAGTT+TGG + chr7.3:5227167-5227186 None:intergenic 25.0%
AAGGAAACAAAATTGGAAAG+GGG + chr7.3:5227843-5227862 None:intergenic 30.0%
AATGTTATACGTATGCTACA+AGG + chr7.3:5227495-5227514 None:intergenic 30.0%
GAAAAAAGGTTTGAATATGG+AGG - chr7.3:5226849-5226868 MS.gene072683:CDS 30.0%
GATGAAATAGATGAAGAGTT+AGG + chr7.3:5227099-5227118 None:intergenic 30.0%
GGAGAAAAAAGGTTTGAATA+TGG - chr7.3:5226846-5226865 MS.gene072683:CDS 30.0%
GTAGCATTCATATTCTTTGA+AGG + chr7.3:5228262-5228281 None:intergenic 30.0%
TGTTCGATTTATCTGAAGAA+AGG - chr7.3:5226917-5226936 MS.gene072683:CDS 30.0%
TTCAATACATTGTCGTCTTT+GGG - chr7.3:5228232-5228251 MS.gene072683:CDS 30.0%
! ATGCTGCTGACTATAATATT+GGG + chr7.3:5228200-5228219 None:intergenic 30.0%
! CTAATGTGGTTGGTATTATT+GGG - chr7.3:5227617-5227636 MS.gene072683:intron 30.0%
! GCAAAGATGGGATTTTTATT+AGG - chr7.3:5227268-5227287 MS.gene072683:intron 30.0%
! TAATGTGGTTGGTATTATTG+GGG - chr7.3:5227618-5227637 MS.gene072683:intron 30.0%
! TCTAATGTGGTTGGTATTAT+TGG - chr7.3:5227616-5227635 MS.gene072683:intron 30.0%
!!! CTCTCTCTTTTTTTTATGGA+AGG - chr7.3:5227245-5227264 MS.gene072683:intron 30.0%
AAGAAGAACGGGACATAATT+GGG + chr7.3:5228096-5228115 None:intergenic 35.0%
AAGGAACAACATCTTGAAGA+AGG + chr7.3:5228333-5228352 None:intergenic 35.0%
AATAGATGAAGAGTTAGGAG+TGG + chr7.3:5227094-5227113 None:intergenic 35.0%
AATTATGTCCCGTTCTTCTT+CGG - chr7.3:5228096-5228115 MS.gene072683:CDS 35.0%
ATGGAGGATTATGCGAATAT+TGG - chr7.3:5226865-5226884 MS.gene072683:CDS 35.0%
ATGTAATGTGAAGAAACACG+TGG - chr7.3:5228006-5228025 MS.gene072683:intron 35.0%
ATTATTGGGGTTAAGGTTGA+AGG - chr7.3:5227631-5227650 MS.gene072683:intron 35.0%
ATTGTTGTAACAACCTACGA+AGG - chr7.3:5228052-5228071 MS.gene072683:CDS 35.0%
CTTCAATACATTGTCGTCTT+TGG - chr7.3:5228231-5228250 MS.gene072683:CDS 35.0%
CTTCACATTACATGAAACAC+TGG + chr7.3:5227999-5228018 None:intergenic 35.0%
TATACGTATGCTACAAGGTT+TGG + chr7.3:5227490-5227509 None:intergenic 35.0%
TCAGATAAATCGAACACACT+TGG + chr7.3:5226913-5226932 None:intergenic 35.0%
TGTTCCTTCACATATGTTCA+AGG - chr7.3:5228345-5228364 MS.gene072683:CDS 35.0%
TTAAAAATAGCCCCTTTCCA+AGG - chr7.3:5227768-5227787 MS.gene072683:intron 35.0%
TTCGTAGGTTGTTACAACAA+TGG + chr7.3:5228053-5228072 None:intergenic 35.0%
! GATGCTGCTGACTATAATAT+TGG + chr7.3:5228201-5228220 None:intergenic 35.0%
! TTTTATGGAAGGGCAAAGAT+GGG - chr7.3:5227256-5227275 MS.gene072683:intron 35.0%
! TTTTTATGGAAGGGCAAAGA+TGG - chr7.3:5227255-5227274 MS.gene072683:intron 35.0%
!! GTTTTGATCAGAACCAAAGT+TGG + chr7.3:5228167-5228186 None:intergenic 35.0%
!! TAGTTTACTTGATTTGCCTG+TGG - chr7.3:5226990-5227009 MS.gene072683:CDS 35.0%
AAGGAGCTTCATGGAGTTAT+TGG - chr7.3:5226936-5226955 MS.gene072683:CDS 40.0%
ACACTTGGAAATGAGTAGCT+AGG + chr7.3:5226898-5226917 None:intergenic 40.0%
AGAGACCACTTTGTAATCCA+AGG - chr7.3:5228293-5228312 MS.gene072683:CDS 40.0%
AGGAGCTTCATGGAGTTATT+GGG - chr7.3:5226937-5226956 MS.gene072683:CDS 40.0%
ATATTGGACTGACCTTGGAA+AGG + chr7.3:5227783-5227802 None:intergenic 40.0%
ATCTGAAGAAAGGAGCTTCA+TGG - chr7.3:5226927-5226946 MS.gene072683:CDS 40.0%
CACTTGGAAATGAGTAGCTA+GGG + chr7.3:5226897-5226916 None:intergenic 40.0%
GAAGAAGAACGGGACATAAT+TGG + chr7.3:5228097-5228116 None:intergenic 40.0%
GAAGTATATTGGACTGACCT+TGG + chr7.3:5227788-5227807 None:intergenic 40.0%
GAGACCACTTTGTAATCCAA+GGG - chr7.3:5228294-5228313 MS.gene072683:CDS 40.0%
TAGGTTGTTACAACAATGGC+TGG + chr7.3:5228049-5228068 None:intergenic 40.0%
TATTGGACTGACCTTGGAAA+GGG + chr7.3:5227782-5227801 None:intergenic 40.0%
TCCTCCTTGAACATATGTGA+AGG + chr7.3:5228352-5228371 None:intergenic 40.0%
TCCTTCACATATGTTCAAGG+AGG - chr7.3:5228348-5228367 MS.gene072683:CDS 40.0%
TGTACCCTTGGATTACAAAG+TGG + chr7.3:5228301-5228320 None:intergenic 40.0%
TTGATCAGAACCAAAGTTGG+TGG + chr7.3:5228164-5228183 None:intergenic 40.0%
TTTGTGGGATCTAATGTGGT+TGG - chr7.3:5227607-5227626 MS.gene072683:intron 40.0%
! ACTTTGTAATCCAAGGGTAC+AGG - chr7.3:5228300-5228319 MS.gene072683:CDS 40.0%
! ATGGTTTGTGGGATCTAATG+TGG - chr7.3:5227603-5227622 MS.gene072683:intron 40.0%
! ATGTGTGTGTTTTCCTTCGT+AGG + chr7.3:5228068-5228087 None:intergenic 40.0%
! GGTTGGTATTATTGGGGTTA+AGG - chr7.3:5227624-5227643 MS.gene072683:intron 40.0%
! TGATTTGCCTGTGGTTGTAA+AGG - chr7.3:5226999-5227018 MS.gene072683:CDS 40.0%
!! AAAGCGATTCTAGCTTCTCT+TGG + chr7.3:5227680-5227699 None:intergenic 40.0%
!! GAATGGAAAAGAGTGTTCAG+AGG - chr7.3:5227044-5227063 MS.gene072683:CDS 40.0%
AGGTGGATCATCTGGAAGAT+GGG - chr7.3:5227714-5227733 MS.gene072683:intron 45.0%
ATCTGGAAGATGGGTACAGA+TGG - chr7.3:5227723-5227742 MS.gene072683:intron 45.0%
ATTGGACTGACCTTGGAAAG+GGG + chr7.3:5227781-5227800 None:intergenic 45.0%
GAACGGGACATAATTGGGTT+TGG + chr7.3:5228091-5228110 None:intergenic 45.0%
GGGTACAGATGGAGAAAGTA+CGG - chr7.3:5227734-5227753 MS.gene072683:intron 45.0%
GGTTGTAAAGGAACCACCTT+TGG - chr7.3:5227011-5227030 MS.gene072683:CDS 45.0%
TCAACTGCGCACAACATCAA+TGG + chr7.3:5227409-5227428 None:intergenic 45.0%
TTTCATGACGAAAAGCGAGG+TGG - chr7.3:5227697-5227716 MS.gene072683:intron 45.0%
! AACCACCTTTGGAGAGTGAT+GGG - chr7.3:5227022-5227041 MS.gene072683:CDS 45.0%
! AATCCAAGGGTACAGGACAA+TGG - chr7.3:5228307-5228326 MS.gene072683:CDS 45.0%
!! TGGTGGTGGTAATAGAGATC+CGG + chr7.3:5228131-5228150 None:intergenic 45.0%
ACGAACAGCCGAAGAAGAAC+GGG + chr7.3:5228107-5228126 None:intergenic 50.0%
CACGAACAGCCGAAGAAGAA+CGG + chr7.3:5228108-5228127 None:intergenic 50.0%
CCATTCCCATCACTCTCCAA+AGG + chr7.3:5227030-5227049 None:intergenic 50.0%
CGCTTTCATGACGAAAAGCG+AGG - chr7.3:5227694-5227713 MS.gene072683:intron 50.0%
GAAAAGCGAGGTGGATCATC+TGG - chr7.3:5227706-5227725 MS.gene072683:intron 50.0%
GAGGTGGATCATCTGGAAGA+TGG - chr7.3:5227713-5227732 MS.gene072683:intron 50.0%
GATGAAGAGTTAGGAGTGGC+AGG + chr7.3:5227090-5227109 None:intergenic 50.0%
GCTGAATGCACCACCAACTT+TGG - chr7.3:5228151-5228170 MS.gene072683:CDS 50.0%
GGTGGTTCCTTTACAACCAC+AGG + chr7.3:5227009-5227028 None:intergenic 50.0%
TTCCCATCACTCTCCAAAGG+TGG + chr7.3:5227027-5227046 None:intergenic 50.0%
! CCTTTGGAGAGTGATGGGAA+TGG - chr7.3:5227027-5227046 MS.gene072683:CDS 50.0%
! GAACCACCTTTGGAGAGTGA+TGG - chr7.3:5227021-5227040 MS.gene072683:CDS 50.0%
!! AAGTTGGTGGTGCATTCAGC+TGG + chr7.3:5228151-5228170 None:intergenic 50.0%
AGGCCATTGTCCTGTACCCT+TGG + chr7.3:5228313-5228332 None:intergenic 55.0%
TCTTCTTCGGCTGTTCGTGC+CGG - chr7.3:5228109-5228128 MS.gene072683:CDS 55.0%
!! TTGGTGGTGCATTCAGCTGG+TGG + chr7.3:5228148-5228167 None:intergenic 55.0%
GTGGTGCATTCAGCTGGTGG+TGG + chr7.3:5228145-5228164 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 5226844 5228375 5226844 ID=MS.gene072683
chr7.3 mRNA 5226844 5228375 5226844 ID=MS.gene072683.t1;Parent=MS.gene072683
chr7.3 exon 5228029 5228375 5228029 ID=MS.gene072683.t1.exon1;Parent=MS.gene072683.t1
chr7.3 CDS 5228029 5228375 5228029 ID=cds.MS.gene072683.t1;Parent=MS.gene072683.t1
chr7.3 exon 5227430 5227573 5227430 ID=MS.gene072683.t1.exon2;Parent=MS.gene072683.t1
chr7.3 CDS 5227430 5227573 5227430 ID=cds.MS.gene072683.t1;Parent=MS.gene072683.t1
chr7.3 exon 5226844 5227240 5226844 ID=MS.gene072683.t1.exon3;Parent=MS.gene072683.t1
chr7.3 CDS 5226844 5227240 5226844 ID=cds.MS.gene072683.t1;Parent=MS.gene072683.t1
Gene Sequence

>MS.gene072683

ATGGAGAAAAAAGGTTTGAATATGGAGGATTATGCGAATATTGGATCTTTCCCTAGCTACTCATTTCCAAGTGTGTTCGATTTATCTGAAGAAAGGAGCTTCATGGAGTTATTGGGTGTGCAGCAGAACATGAACAACTATAGTGATAGTTTACTTGATTTGCCTGTGGTTGTAAAGGAACCACCTTTGGAGAGTGATGGGAATGGAAAAGAGTGTTCAGAGGTTTTGAATAGTCAACAACAACCTGCCACTCCTAACTCTTCATCTATTTCATCTGCTTCTAGTGAAGCAATCAATGATGAACACAATAAAACTGTTGACCAAACTAATAATCAACTCAACAAACAGTGAGTTTCATTTTCTTCTTCTATTTTTATCTCTTTTTATCTTCTAGCAAGAATCTCTCTCTTTTTTTTATGGAAGGGCAAAGATGGGATTTTTATTAGGTAAAACAAAAAAAAAAGGTTTTGGAATTTGATTATGGGCTTATTTTTTCACCTACCCAATTTTGTTTTTAAAAGTTTTGATTTCATGAATTATGACTGTCTTCATTATTTGTGTTCCATTGATGTTGTGCGCAGTTGAGTTGAGTTGAGATAAAAACATCTTTCTTTGCTTTTATTACAATATTGCTTTGAGTGATCCAAACCTTGTAGCATACGTATAACATTAATTTGTTTGATTTTTGGAACATGTTTTTTTGACAAAGTTTGATACTTGAACAAAATGAATTAAGTTTTCTAGTAAGATTTAATTTCTATGGTTTGTGGGATCTAATGTGGTTGGTATTATTGGGGTTAAGGTTGAAGGCTAAGAAGACAAATCAGAAGAGACCAAGAGAAGCTAGAATCGCTTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTTAAAAATAGCCCCTTTCCAAGGTCAGTCCAATATACTTCTATAATTTTATTCATTCTTCAAAATACTACAACCCCTTTCCAATTTTGTTTCCTTTAATCTCTCCCTTTATTAAAGCATAAGAAAAGTAATATTACTGTGTTCAAATAAGAAATTTTAGTAATAATTTATTGATTAACGTTTGAACTAACTGTATCTATATGCATATATAGGAGCTATTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACACGTGGAGAGATCTTTGAGTGATCCAGCCATTGTTGTAACAACCTACGAAGGAAAACACACACATCCAAACCCAATTATGTCCCGTTCTTCTTCGGCTGTTCGTGCCGGATCTCTATTACCACCACCAGCTGAATGCACCACCAACTTTGGTTCTGATCAAAACTACAATATATCCCAATATTATAGTCAGCAGCATCAGCAAGTACTCTTCAATACATTGTCGTCTTTGGGTTTCCCTTCAAAGAATATGAATGCTACTTTTTCTCAAGAGAGACCACTTTGTAATCCAAGGGTACAGGACAATGGCCTTCTTCAAGATGTTGTTCCTTCACATATGTTCAAGGAGGAGTAG
Protein sequence

>MS.gene072683.t1

MEKKGLNMEDYANIGSFPSYSFPSVFDLSEERSFMELLGVQQNMNNYSDSLLDLPVVVKEPPLESDGNGKECSEVLNSQQQPATPNSSSISSASSEAINDEHNKTVDQTNNQLNKQLKAKKTNQKRPREARIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKHVERSLSDPAIVVTTYEGKHTHPNPIMSRSSSAVRAGSLLPPPAECTTNFGSDQNYNISQYYSQQHQQVLFNTLSSLGFPSKNMNATFSQERPLCNPRVQDNGLLQDVVPSHMFKEE