AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072807

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072807.t1 MTR_5g010650 88.679 477 53 1 1 477 1 476 0.0 853
MS.gene072807.t1 MTR_3g110028 60.759 158 59 1 53 210 31 185 5.39e-62 217
MS.gene072807.t1 MTR_7g061330 57.895 171 69 1 40 210 46 213 9.96e-62 211
MS.gene072807.t1 MTR_7g461410 57.895 171 69 1 40 210 46 213 9.96e-62 211
MS.gene072807.t1 MTR_7g061330 60.625 160 60 1 51 210 21 177 1.34e-60 207
MS.gene072807.t1 MTR_1g026870 62.025 158 57 1 53 210 31 185 1.42e-60 214
MS.gene072807.t1 MTR_3g463400 43.871 155 74 2 58 212 94 235 4.47e-36 139
MS.gene072807.t1 MTR_3g463400 36.190 105 63 2 49 153 127 227 3.89e-11 65.5
MS.gene072807.t1 MTR_7g037260 51.327 113 55 0 107 219 142 254 1.41e-35 135
MS.gene072807.t1 MTR_7g037260 38.384 99 57 2 55 153 145 239 4.22e-12 67.8
MS.gene072807.t1 MTR_3g077650 51.351 111 54 0 107 217 178 288 3.07e-35 136
MS.gene072807.t1 MTR_3g077650 36.111 108 65 2 46 153 172 275 3.91e-13 71.6
MS.gene072807.t1 MTR_5g070020 53.333 105 49 0 108 212 120 224 3.83e-35 134
MS.gene072807.t1 MTR_5g070020 36.735 98 58 2 55 152 122 215 5.52e-11 64.3
MS.gene072807.t1 MTR_4g105660 53.636 110 51 0 108 217 178 287 3.85e-35 136
MS.gene072807.t1 MTR_4g105660 35.652 115 67 3 41 152 163 273 6.59e-11 64.7
MS.gene072807.t1 MTR_4g088015 46.610 118 63 0 102 219 213 330 2.09e-33 131
MS.gene072807.t1 MTR_4g088015 37.755 98 57 2 55 152 221 314 4.15e-11 65.1
MS.gene072807.t1 MTR_7g451170 51.376 109 53 0 109 217 190 298 2.40e-33 130
MS.gene072807.t1 MTR_5g049190 51.887 106 51 0 107 212 16 121 6.18e-33 125
MS.gene072807.t1 MTR_4g094982 43.357 143 81 0 107 249 2 144 1.27e-32 125
MS.gene072807.t1 MTR_7g035350 51.786 112 53 1 107 217 222 333 3.99e-32 128
MS.gene072807.t1 MTR_5g016510 52.336 107 51 0 107 213 2 108 6.52e-32 124
MS.gene072807.t1 MTR_7g037130 50.000 116 53 1 91 206 131 241 6.55e-32 125
MS.gene072807.t1 MTR_4g019370 50.485 103 51 0 109 211 37 139 3.01e-31 123
MS.gene072807.t1 MTR_5g082910 50.485 103 51 0 105 207 14 116 2.10e-30 119
MS.gene072807.t1 MTR_1g008970 46.341 123 47 1 85 207 85 188 1.00e-29 117
MS.gene072807.t1 MTR_1g057980 53.000 100 47 0 107 206 77 176 2.06e-29 117
MS.gene072807.t1 MTR_6g015455 49.533 107 54 0 107 213 2 108 2.64e-28 119
MS.gene072807.t1 MTR_3g101290 45.794 107 56 2 107 212 34 139 4.88e-27 108
MS.gene072807.t1 MTR_7g450950 46.429 112 57 1 109 217 156 267 9.80e-27 110
MS.gene072807.t1 MTR_5g041570 51.020 98 48 0 113 210 137 234 2.86e-26 111
MS.gene072807.t1 MTR_5g029840 48.039 102 52 1 110 210 14 115 6.71e-26 108
MS.gene072807.t1 MTR_4g082040 48.980 98 50 0 113 210 108 205 1.23e-25 109
MS.gene072807.t1 MTR_1g100653 44.545 110 60 1 106 214 10 119 1.68e-25 106
MS.gene072807.t1 MTR_4g091490 44.860 107 58 1 105 210 10 116 4.16e-25 106
MS.gene072807.t1 MTR_3g074520 49.038 104 52 1 108 210 12 115 4.88e-25 106
MS.gene072807.t1 MTR_6g074860 48.454 97 50 0 113 209 7 103 8.44e-25 103
MS.gene072807.t1 MTR_2g011660 45.794 107 57 1 105 210 10 116 9.19e-25 105
MS.gene072807.t1 MTR_3g097450 39.850 133 77 2 110 239 14 146 1.17e-24 103
MS.gene072807.t1 MTR_0008s0470 39.103 156 88 2 108 262 13 162 1.27e-24 103
MS.gene072807.t1 MTR_2g097910 44.068 118 60 2 108 219 20 137 3.16e-24 103
MS.gene072807.t1 MTR_2g064160 47.115 104 53 2 109 210 11 114 4.82e-24 102
MS.gene072807.t1 MTR_3g028740 48.077 104 53 1 108 210 22 125 5.73e-24 103
MS.gene072807.t1 MTR_0008s0390 40.441 136 77 2 108 239 13 148 6.45e-24 101
MS.gene072807.t1 MTR_7g110830 48.077 104 53 1 108 210 12 115 6.74e-24 103
MS.gene072807.t1 MTR_1g085640 47.115 104 54 1 108 210 12 115 6.77e-24 103
MS.gene072807.t1 MTR_1g062940 47.619 105 54 1 107 210 5 109 7.14e-24 99.8
MS.gene072807.t1 MTR_3g052450 44.762 105 57 1 107 210 39 143 7.72e-24 104
MS.gene072807.t1 MTR_4g478180 48.077 104 53 1 108 210 13 116 8.49e-24 102
MS.gene072807.t1 MTR_5g088080 46.218 119 60 3 107 221 11 129 8.73e-24 100
MS.gene072807.t1 MTR_5g088150 46.218 119 60 3 107 221 11 129 8.73e-24 100
MS.gene072807.t1 MTR_5g488210 46.218 119 60 3 107 221 11 129 8.73e-24 100
MS.gene072807.t1 MTR_1g073170 44.915 118 63 2 100 216 12 128 8.78e-24 100
MS.gene072807.t1 MTR_1g073170 38.384 99 58 2 54 152 21 116 5.74e-11 63.2
MS.gene072807.t1 MTR_5g088640 46.218 119 60 3 107 221 11 129 8.81e-24 100
MS.gene072807.t1 MTR_5g488170 46.218 119 60 3 107 221 11 129 1.10e-23 100
MS.gene072807.t1 MTR_4g100720 46.078 102 54 1 112 212 17 118 1.40e-23 97.8
MS.gene072807.t1 MTR_5g062790 41.045 134 75 3 107 236 8 141 1.84e-23 100
MS.gene072807.t1 MTR_1g045610 48.544 103 52 1 110 211 23 125 1.96e-23 99.8
MS.gene072807.t1 MTR_5g007370 44.231 104 57 1 108 210 12 115 2.28e-23 100
MS.gene072807.t1 MTR_4g073420 46.078 102 54 1 110 210 14 115 2.55e-23 100
MS.gene072807.t1 MTR_2g096380 45.283 106 57 1 107 211 5 110 2.79e-23 98.6
MS.gene072807.t1 MTR_8g020490 42.593 108 61 1 110 216 10 117 2.80e-23 99.0
MS.gene072807.t1 MTR_3g089045 46.226 106 57 0 113 218 19 124 2.95e-23 100
MS.gene072807.t1 MTR_3g052430 43.810 105 58 1 107 210 40 144 3.15e-23 103
MS.gene072807.t1 MTR_1g085040 46.154 104 55 1 108 210 12 115 3.71e-23 101
MS.gene072807.t1 MTR_0008s0280 38.710 124 75 1 110 232 14 137 4.30e-23 97.8
MS.gene072807.t1 MTR_0008s0280 31.731 104 68 2 53 156 12 112 2.89e-11 63.9
MS.gene072807.t1 MTR_8g095390 45.098 102 55 1 110 210 14 115 5.97e-23 99.8
MS.gene072807.t1 MTR_3g461490 44.954 109 58 2 107 213 10 118 7.39e-23 99.4
MS.gene072807.t1 MTR_8g017440 45.192 104 55 2 109 210 12 115 7.79e-23 99.8
MS.gene072807.t1 MTR_4g065017 44.444 108 59 1 104 210 13 120 7.82e-23 99.4
MS.gene072807.t1 MTR_4g063100 47.059 102 53 1 110 210 9 110 8.36e-23 97.8
MS.gene072807.t1 MTR_4g485530 43.810 105 58 1 107 210 11 115 9.00e-23 95.9
MS.gene072807.t1 MTR_6g027340 43.158 95 54 0 110 204 16 110 9.18e-23 96.3
MS.gene072807.t1 MTR_6g027370 42.342 111 63 1 101 210 89 199 1.04e-22 99.4
MS.gene072807.t1 MTR_7g096930 47.115 104 54 1 108 210 12 115 1.05e-22 98.2
MS.gene072807.t1 MTR_2g099740 40.000 135 75 3 109 241 12 142 1.07e-22 100
MS.gene072807.t1 MTR_4g105130 44.231 104 57 1 108 210 12 115 1.10e-22 99.8
MS.gene072807.t1 MTR_3g011610 43.925 107 59 1 108 213 37 143 1.22e-22 101
MS.gene072807.t1 MTR_1g110460 42.056 107 61 1 106 211 24 130 1.29e-22 98.6
MS.gene072807.t1 MTR_8g017540 45.192 104 55 2 109 210 58 161 1.40e-22 99.8
MS.gene072807.t1 MTR_0251s0050 46.154 104 55 1 108 210 13 116 1.71e-22 97.4
MS.gene072807.t1 MTR_1g112760 44.231 104 57 1 108 210 13 116 1.94e-22 96.3
MS.gene072807.t1 MTR_6g027360 43.000 100 57 0 105 204 73 172 2.33e-22 97.8
MS.gene072807.t1 MTR_7g115650 37.013 154 89 4 108 256 12 162 2.40e-22 95.1
MS.gene072807.t1 MTR_7g086960 47.959 98 51 0 113 210 92 189 2.55e-22 98.6
MS.gene072807.t1 MTR_3g083540 44.231 104 57 1 108 210 41 144 2.86e-22 97.4
MS.gene072807.t1 MTR_3g077110 45.192 104 56 1 108 210 12 115 3.15e-22 98.2
MS.gene072807.t1 MTR_8g027345 42.982 114 64 1 108 220 12 125 3.71e-22 97.1
MS.gene072807.t1 MTR_8g098860 45.370 108 57 2 105 210 8 115 4.28e-22 97.1
MS.gene072807.t1 MTR_8g017500 42.105 114 64 2 99 210 2 115 4.68e-22 97.4
MS.gene072807.t1 MTR_5g088610 43.333 120 64 3 107 222 8 127 4.70e-22 97.8
MS.gene072807.t1 MTR_8g031360 46.667 105 54 2 108 210 13 117 4.85e-22 96.7
MS.gene072807.t1 MTR_2g089420 37.500 160 90 4 105 255 8 166 5.87e-22 98.6
MS.gene072807.t1 MTR_4g082230 42.373 118 63 2 108 224 12 125 6.08e-22 98.2
MS.gene072807.t1 MTR_5g079670 41.176 102 59 1 110 210 13 114 7.10e-22 94.0
MS.gene072807.t1 MTR_1g021230 45.370 108 58 1 108 214 57 164 7.86e-22 98.2
MS.gene072807.t1 MTR_7g010210 43.519 108 60 1 110 216 14 121 1.22e-21 94.7
MS.gene072807.t1 MTR_7g010210 43.519 108 60 1 110 216 14 121 1.32e-21 95.9
MS.gene072807.t1 MTR_4g082290 42.373 118 63 2 108 224 12 125 1.48e-21 97.1
MS.gene072807.t1 MTR_1g043080 46.154 104 55 1 108 210 12 115 1.72e-21 94.0
MS.gene072807.t1 MTR_8g042410 42.991 107 60 1 108 213 37 143 1.83e-21 97.8
MS.gene072807.t1 MTR_6g055910 42.857 119 67 1 97 214 3 121 1.89e-21 94.7
MS.gene072807.t1 MTR_6g090405 45.113 133 63 5 109 231 12 144 1.95e-21 94.0
MS.gene072807.t1 MTR_2g089620 44.231 104 57 1 108 210 12 115 2.24e-21 95.1
MS.gene072807.t1 MTR_1g043050 45.192 104 56 1 108 210 12 115 2.26e-21 93.6
MS.gene072807.t1 MTR_7g076740 46.667 105 54 2 108 210 12 116 2.78e-21 94.4
MS.gene072807.t1 MTR_8g017340 47.000 100 51 2 113 210 17 116 2.78e-21 97.1
MS.gene072807.t1 MTR_7g087130 39.669 121 72 1 110 229 14 134 5.48e-21 94.4
MS.gene072807.t1 MTR_8g468380 40.404 99 59 0 112 210 24 122 5.83e-21 95.5
MS.gene072807.t1 MTR_0197s0010 40.476 126 68 3 112 234 5 126 5.92e-21 92.0
MS.gene072807.t1 MTR_5g042030 43.269 104 58 1 108 210 7 110 6.02e-21 93.2
MS.gene072807.t1 MTR_5g010020 45.631 103 54 2 105 205 8 110 7.23e-21 94.0
MS.gene072807.t1 MTR_5g038910 39.000 100 61 0 112 211 28 127 7.24e-21 95.5
MS.gene072807.t1 MTR_1g076150 45.192 104 56 1 108 210 12 115 7.76e-21 92.4
MS.gene072807.t1 MTR_8g017390 45.000 100 53 2 113 210 17 116 7.91e-21 95.5
MS.gene072807.t1 MTR_5g038910 39.000 100 61 0 112 211 28 127 7.99e-21 94.7
MS.gene072807.t1 MTR_8g006470 47.059 102 52 2 110 209 12 113 1.20e-20 92.4
MS.gene072807.t1 MTR_0140s0030 37.903 124 68 2 108 226 13 132 1.39e-20 93.2
MS.gene072807.t1 MTR_0489s0020 37.903 124 68 2 108 226 13 132 1.39e-20 93.2
MS.gene072807.t1 MTR_1g017000 46.667 105 53 3 109 210 12 116 1.52e-20 91.3
MS.gene072807.t1 MTR_7g035075 42.308 104 59 1 107 209 13 116 1.54e-20 90.1
MS.gene072807.t1 MTR_7g035075 33.333 117 75 2 54 170 15 128 1.89e-11 63.9
MS.gene072807.t1 MTR_7g111290 46.465 99 52 1 108 205 12 110 1.82e-20 93.2
MS.gene072807.t1 MTR_2g089450 43.689 103 57 1 108 209 12 114 1.91e-20 90.9
MS.gene072807.t1 MTR_3g103570 45.283 106 56 2 107 210 11 116 1.96e-20 92.8
MS.gene072807.t1 MTR_4g102380 46.078 102 54 1 110 210 14 115 2.29e-20 91.3
MS.gene072807.t1 MTR_8g017350 46.000 100 52 2 113 210 17 116 2.29e-20 94.7
MS.gene072807.t1 MTR_1g100667 42.453 106 60 1 110 214 15 120 2.42e-20 91.3
MS.gene072807.t1 MTR_7g011170 43.269 104 58 1 108 210 12 115 3.16e-20 91.7
MS.gene072807.t1 MTR_4g125520 41.346 104 60 1 108 210 12 115 3.75e-20 91.3
MS.gene072807.t1 MTR_6g080360 38.356 146 85 3 58 203 482 622 5.24e-20 94.0
MS.gene072807.t1 MTR_6g080360 31.667 180 110 3 38 207 399 575 3.14e-19 91.7
MS.gene072807.t1 MTR_2g034790 43.269 104 58 1 108 210 12 115 7.93e-20 90.9
MS.gene072807.t1 MTR_6g080360 38.356 146 85 3 58 203 262 402 8.39e-20 93.2
MS.gene072807.t1 MTR_6g080360 31.111 180 111 3 38 207 179 355 4.65e-19 90.9
MS.gene072807.t1 MTR_6g009430 43.269 104 57 2 109 210 12 115 9.98e-20 90.5
MS.gene072807.t1 MTR_3g065440 45.192 104 56 1 108 210 12 115 1.16e-19 90.1
MS.gene072807.t1 MTR_5g078140 45.192 104 56 1 108 210 12 115 1.22e-19 90.1
MS.gene072807.t1 MTR_4g121460 43.269 104 58 1 108 210 12 115 1.23e-19 90.5
MS.gene072807.t1 MTR_0063s0090 44.000 100 55 1 110 208 14 113 1.25e-19 87.8
MS.gene072807.t1 MTR_2g033170 40.517 116 66 2 107 221 23 136 1.45e-19 90.1
MS.gene072807.t1 MTR_4g057635 48.148 108 53 3 109 213 12 119 1.58e-19 89.7
MS.gene072807.t1 MTR_4g128190 39.344 122 58 4 104 221 7 116 1.68e-19 87.8
MS.gene072807.t1 MTR_7g117730 43.434 99 55 1 113 210 17 115 1.76e-19 88.2
MS.gene072807.t1 MTR_6g012690 42.308 104 59 1 108 210 12 115 2.50e-19 89.7
MS.gene072807.t1 MTR_3g039990 40.196 102 60 1 110 210 15 116 3.64e-19 88.6
MS.gene072807.t1 MTR_1g017140 43.396 106 58 2 107 210 11 116 4.14e-19 89.0
MS.gene072807.t1 MTR_2g088170 45.370 108 58 1 108 214 29 136 4.14e-19 90.1
MS.gene072807.t1 MTR_5g014990 44.340 106 57 2 107 210 11 116 4.49e-19 88.2
MS.gene072807.t1 MTR_1g083630 44.762 105 57 1 108 211 12 116 4.51e-19 90.5
MS.gene072807.t1 MTR_5g078860 41.346 104 60 1 108 210 7 110 4.56e-19 88.2
MS.gene072807.t1 MTR_6g006030 40.385 104 61 1 107 209 13 116 5.78e-19 85.5
MS.gene072807.t1 MTR_1g086530 38.938 113 66 2 110 221 35 145 6.84e-19 87.0
MS.gene072807.t1 MTR_4g029540 41.818 110 62 2 108 215 10 119 9.99e-19 87.0
MS.gene072807.t1 MTR_5g078800 39.423 104 62 1 108 210 7 110 1.10e-18 86.3
MS.gene072807.t1 MTR_2g067420 45.455 99 52 2 109 205 14 112 1.44e-18 87.0
MS.gene072807.t1 MTR_1g086510 38.053 113 67 2 110 221 23 133 2.14e-18 85.5
MS.gene072807.t1 MTR_6g012180 40.594 101 51 2 110 205 14 110 2.61e-18 86.3
MS.gene072807.t1 MTR_7g017260 31.461 178 107 2 110 284 27 192 2.71e-18 85.1
MS.gene072807.t1 MTR_5g078930 40.196 102 60 1 110 210 11 112 3.42e-18 83.6
MS.gene072807.t1 MTR_5g079290 39.216 102 61 1 110 210 19 120 3.87e-18 84.7
MS.gene072807.t1 MTR_5g079120 41.346 104 60 1 108 210 61 164 4.35e-18 85.1
MS.gene072807.t1 MTR_7g102110 43.689 103 56 2 110 210 14 116 4.71e-18 84.3
MS.gene072807.t1 MTR_5g079220 36.036 111 70 1 101 210 14 124 5.26e-18 84.3
MS.gene072807.t1 MTR_2g095520 45.545 101 53 2 107 205 11 111 6.57e-18 85.1
MS.gene072807.t1 MTR_5g078910 39.423 104 62 1 108 210 7 110 7.67e-18 84.3
MS.gene072807.t1 MTR_5g078950 38.889 108 64 2 103 208 1 108 9.71e-18 83.6
MS.gene072807.t1 MTR_8g060940 39.394 99 59 1 110 207 9 107 2.37e-17 82.0
MS.gene072807.t1 MTR_0001s0360 39.216 102 61 1 110 210 9 110 2.38e-17 82.0
MS.gene072807.t1 MTR_4g097570 45.455 99 51 3 109 204 12 110 3.14e-17 82.4
MS.gene072807.t1 MTR_6g055910 51.389 72 35 0 143 214 21 92 5.17e-17 81.3
MS.gene072807.t1 MTR_4g097570 45.000 100 51 3 109 204 12 111 6.15e-17 81.6
MS.gene072807.t1 MTR_4g123040 37.931 116 69 2 107 221 23 136 6.23e-17 82.0
MS.gene072807.t1 MTR_4g128670 44.898 98 52 2 110 205 14 111 6.93e-17 82.4
MS.gene072807.t1 MTR_3g045430 39.252 107 63 2 108 212 12 118 2.52e-16 79.7
MS.gene072807.t1 MTR_0247s0040 37.000 100 62 1 110 208 9 108 2.91e-16 77.0
MS.gene072807.t1 MTR_0193s0090 36.634 101 63 1 110 209 9 109 8.48e-16 76.6
MS.gene072807.t1 MTR_2g096380 47.826 69 36 0 143 211 23 91 1.32e-15 76.3
MS.gene072807.t1 MTR_7g109320 46.154 104 55 1 108 210 12 115 1.75e-15 78.2
MS.gene072807.t1 MTR_4g063100 48.529 68 35 0 143 210 14 81 1.77e-15 75.9
MS.gene072807.t1 MTR_7g061550 37.113 97 58 1 110 203 7 103 1.58e-14 75.5
MS.gene072807.t1 MTR_7g111290 52.381 63 30 0 143 205 6 68 1.80e-14 75.1
MS.gene072807.t1 MTR_1g085880 41.414 99 56 2 113 209 17 115 2.31e-14 72.0
MS.gene072807.t1 MTR_7g035300 39.785 93 44 3 113 205 79 159 1.24e-13 70.9
MS.gene072807.t1 MTR_1g085770 41.414 99 56 2 113 209 17 115 1.34e-13 72.0
MS.gene072807.t1 MTR_7g115550 39.759 83 49 1 113 195 10 91 1.01e-11 67.8
MS.gene072807.t1 MTR_7g115550 39.759 83 49 1 113 195 10 91 1.03e-11 67.8
MS.gene072807.t1 MTR_5g007300 37.662 77 47 1 108 183 64 140 2.54e-11 62.0
MS.gene072807.t1 MTR_5g010470 39.241 79 48 0 110 188 7 85 6.09e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072807.t1 AT3G09370 39.216 408 181 11 40 428 60 419 3.17e-67 224
MS.gene072807.t1 AT3G09370 38.756 418 169 12 40 428 55 414 4.48e-67 224
MS.gene072807.t1 AT3G09370 39.216 408 181 11 40 428 68 427 4.70e-67 224
MS.gene072807.t1 AT5G02320 62.821 156 55 1 55 210 15 167 8.91e-65 217
MS.gene072807.t1 AT5G02320 62.821 156 55 1 55 210 75 227 1.24e-64 218
MS.gene072807.t1 AT5G02320 62.821 156 55 1 55 210 75 227 1.24e-64 218
MS.gene072807.t1 AT4G32730 44.578 249 115 6 53 299 33 260 6.45e-60 210
MS.gene072807.t1 AT5G11510 59.494 158 61 1 53 210 27 181 2.04e-59 208
MS.gene072807.t1 AT5G11510 59.494 158 61 1 53 210 27 181 2.21e-59 209
MS.gene072807.t1 AT4G32730 44.578 249 115 6 53 299 33 260 2.27e-59 211
MS.gene072807.t1 AT4G32730 44.578 249 115 6 53 299 33 260 2.27e-59 211
MS.gene072807.t1 AT4G32730 44.578 249 115 6 53 299 33 260 2.27e-59 211
MS.gene072807.t1 AT4G32730 44.578 249 115 6 53 299 33 260 2.27e-59 211
MS.gene072807.t1 AT5G11510 59.494 158 61 1 53 210 27 181 3.45e-59 210
MS.gene072807.t1 AT5G11510 59.494 158 61 1 53 210 27 181 3.45e-59 210
MS.gene072807.t1 AT5G11510 59.494 158 61 1 53 210 27 181 3.45e-59 210
MS.gene072807.t1 AT4G00540 51.163 172 73 3 53 216 44 212 4.78e-49 173
MS.gene072807.t1 AT4G00540 51.163 172 73 3 53 216 42 210 1.60e-48 172
MS.gene072807.t1 AT4G18770 49.254 134 66 1 100 233 207 338 1.28e-38 145
MS.gene072807.t1 AT4G18770 36.735 98 58 2 55 152 217 310 5.70e-13 71.2
MS.gene072807.t1 AT5G58850 50.000 112 56 0 101 212 96 207 6.96e-35 135
MS.gene072807.t1 AT3G27785 54.286 105 48 0 108 212 187 291 1.03e-33 132
MS.gene072807.t1 AT3G27785 36.735 98 58 2 55 152 189 282 8.30e-12 67.4
MS.gene072807.t1 AT5G40360 51.818 110 53 0 110 219 158 267 6.57e-33 128
MS.gene072807.t1 AT5G40360 31.206 141 87 4 12 152 121 251 3.90e-11 65.1
MS.gene072807.t1 AT3G09230 51.923 104 50 0 107 210 52 155 7.69e-32 126
MS.gene072807.t1 AT3G09230 37.255 102 60 2 55 156 55 152 1.55e-11 66.2
MS.gene072807.t1 AT5G11050 44.167 120 67 0 93 212 88 207 2.47e-31 125
MS.gene072807.t1 AT4G37260 46.552 116 62 0 105 220 8 123 1.95e-30 120
MS.gene072807.t1 AT3G55730 50.000 102 51 0 109 210 55 156 1.05e-29 120
MS.gene072807.t1 AT5G67300 50.000 104 52 0 107 210 3 106 2.21e-29 117
MS.gene072807.t1 AT3G50060 49.074 108 55 0 107 214 3 110 4.75e-29 116
MS.gene072807.t1 AT2G23290 50.000 106 53 0 107 212 10 115 6.03e-29 116
MS.gene072807.t1 AT2G39880 49.038 104 53 0 109 212 49 152 1.38e-28 116
MS.gene072807.t1 AT2G25230 49.515 103 52 0 107 209 23 125 6.03e-28 111
MS.gene072807.t1 AT1G69560 48.980 98 50 0 113 210 110 207 3.13e-26 109
MS.gene072807.t1 AT1G69560 48.980 98 50 0 113 210 126 223 3.48e-26 109
MS.gene072807.t1 AT1G26780 47.573 103 54 0 108 210 96 198 6.05e-26 107
MS.gene072807.t1 AT1G26780 47.573 103 54 0 108 210 96 198 1.03e-25 108
MS.gene072807.t1 AT5G16770 49.038 104 52 1 108 210 12 115 1.32e-25 107
MS.gene072807.t1 AT5G16770 49.038 104 52 1 108 210 12 115 1.32e-25 107
MS.gene072807.t1 AT1G17950 47.475 99 52 0 113 211 8 106 1.48e-25 105
MS.gene072807.t1 AT4G33450 47.959 98 51 0 113 210 22 119 1.71e-25 105
MS.gene072807.t1 AT1G35515 48.039 102 52 1 110 210 14 115 1.88e-25 103
MS.gene072807.t1 AT5G16770 49.038 104 52 1 108 210 12 115 1.99e-25 107
MS.gene072807.t1 AT5G16770 49.038 104 52 1 108 210 12 115 1.99e-25 107
MS.gene072807.t1 AT5G40430 44.444 108 59 1 107 214 51 157 4.01e-25 104
MS.gene072807.t1 AT3G29020 42.063 126 64 1 113 238 68 184 8.17e-25 102
MS.gene072807.t1 AT5G17800 42.400 125 63 2 113 228 96 220 1.28e-24 104
MS.gene072807.t1 AT4G01680 48.077 104 53 1 108 210 12 115 1.30e-24 102
MS.gene072807.t1 AT5G40330 43.396 106 59 1 106 210 10 115 1.94e-24 101
MS.gene072807.t1 AT3G29020 42.063 126 64 1 113 238 70 186 2.11e-24 103
MS.gene072807.t1 AT5G14750 43.519 108 60 1 104 210 12 119 2.22e-24 100
MS.gene072807.t1 AT5G59780 43.243 111 62 1 102 211 2 112 3.02e-24 101
MS.gene072807.t1 AT3G02940 48.077 104 53 1 108 210 12 115 3.04e-24 103
MS.gene072807.t1 AT4G01680 48.077 104 53 1 108 210 12 115 3.12e-24 103
MS.gene072807.t1 AT1G22640 46.078 102 54 1 110 210 14 115 3.22e-24 102
MS.gene072807.t1 AT1G22640 34.314 102 64 2 55 156 14 112 4.90e-11 63.5
MS.gene072807.t1 AT3G30210 40.719 167 91 5 110 270 29 193 4.22e-24 102
MS.gene072807.t1 AT3G12720 44.340 106 58 1 106 210 20 125 4.70e-24 102
MS.gene072807.t1 AT3G02940 48.077 104 53 1 108 210 12 115 5.54e-24 102
MS.gene072807.t1 AT3G02940 48.077 104 53 1 108 210 12 115 5.54e-24 102
MS.gene072807.t1 AT1G56160 47.115 104 53 2 109 210 14 117 6.68e-24 102
MS.gene072807.t1 AT4G28110 46.078 102 54 1 110 210 14 115 6.99e-24 101
MS.gene072807.t1 AT4G09460 46.078 102 54 1 110 210 14 115 8.49e-24 100
MS.gene072807.t1 AT3G46130 46.602 103 54 1 110 211 11 113 8.59e-24 100
MS.gene072807.t1 AT1G73410 48.485 99 51 0 113 211 9 107 8.61e-24 100
MS.gene072807.t1 AT5G06100 40.833 120 67 2 95 213 22 138 8.64e-24 103
MS.gene072807.t1 AT1G73410 47.059 102 54 0 113 214 9 110 9.23e-24 99.0
MS.gene072807.t1 AT1G34670 49.038 104 52 1 108 210 12 115 9.42e-24 102
MS.gene072807.t1 AT2G47190 42.241 116 64 2 107 221 19 132 9.79e-24 100
MS.gene072807.t1 AT5G10280 47.115 104 54 1 108 210 12 115 1.05e-23 102
MS.gene072807.t1 AT5G06100 40.833 120 67 2 95 213 22 138 1.07e-23 104
MS.gene072807.t1 AT5G06100 40.833 120 67 2 95 213 22 138 1.07e-23 104
MS.gene072807.t1 AT5G06100 40.833 120 67 2 95 213 22 138 1.07e-23 104
MS.gene072807.t1 AT5G06100 40.833 120 67 2 95 213 22 138 1.07e-23 104
MS.gene072807.t1 AT5G26660 39.024 164 84 5 108 257 12 173 1.16e-23 102
MS.gene072807.t1 AT3G27920 36.310 168 89 4 105 254 11 178 1.18e-23 99.8
MS.gene072807.t1 AT3G13890 46.154 104 54 2 109 210 12 115 1.25e-23 102
MS.gene072807.t1 AT3G13540 45.455 99 53 1 113 210 28 126 1.34e-23 100
MS.gene072807.t1 AT5G39700 42.400 125 66 2 113 231 59 183 1.50e-23 98.2
MS.gene072807.t1 AT4G21440 45.192 104 56 1 108 210 12 115 1.73e-23 101
MS.gene072807.t1 AT4G13480 50.000 108 51 2 110 216 8 113 2.12e-23 99.8
MS.gene072807.t1 AT1G74080 46.602 103 54 1 108 209 12 114 2.17e-23 101
MS.gene072807.t1 AT5G65230 48.077 104 53 1 108 210 12 115 2.24e-23 100
MS.gene072807.t1 AT3G11440 43.925 107 59 1 108 213 41 147 2.62e-23 102
MS.gene072807.t1 AT1G18570 46.154 104 55 1 108 210 13 116 3.13e-23 101
MS.gene072807.t1 AT1G57560 46.154 104 55 1 108 210 12 115 3.72e-23 99.4
MS.gene072807.t1 AT4G05100 45.192 104 56 1 108 210 13 116 4.04e-23 100
MS.gene072807.t1 AT2G32460 45.794 107 57 1 108 213 18 124 4.35e-23 102
MS.gene072807.t1 AT1G57560 46.154 104 55 1 108 210 12 115 4.79e-23 99.8
MS.gene072807.t1 AT4G38620 45.098 102 55 1 110 210 14 115 4.89e-23 99.0
MS.gene072807.t1 AT3G53200 44.860 107 58 1 108 213 9 115 4.98e-23 98.2
MS.gene072807.t1 AT3G11440 43.925 107 59 1 108 213 41 147 5.14e-23 102
MS.gene072807.t1 AT3G11440 43.925 107 59 1 108 213 41 147 5.14e-23 102
MS.gene072807.t1 AT3G11440 43.925 107 59 1 108 213 41 147 5.14e-23 102
MS.gene072807.t1 AT2G32460 45.794 107 57 1 108 213 6 112 5.18e-23 102
MS.gene072807.t1 AT3G08500 47.115 104 54 1 108 210 30 133 5.40e-23 100
MS.gene072807.t1 AT1G09540 47.115 104 54 1 108 210 12 115 7.14e-23 100
MS.gene072807.t1 AT1G74430 44.231 104 57 1 108 210 12 115 8.19e-23 98.2
MS.gene072807.t1 AT3G48920 50.000 98 48 1 113 209 23 120 8.70e-23 97.8
MS.gene072807.t1 AT3G61250 46.154 104 55 1 108 210 12 115 8.91e-23 99.0
MS.gene072807.t1 AT5G56110 45.794 107 56 2 109 213 12 118 1.15e-22 99.0
MS.gene072807.t1 AT4G26930 45.631 103 55 1 108 209 19 121 1.23e-22 100
MS.gene072807.t1 AT4G01680 43.103 116 53 1 108 210 12 127 1.37e-22 99.4
MS.gene072807.t1 AT1G79180 45.161 124 63 3 109 230 14 134 1.39e-22 98.2
MS.gene072807.t1 AT3G23250 45.192 104 56 1 108 210 12 115 1.68e-22 97.8
MS.gene072807.t1 AT3G23250 33.981 103 65 2 54 156 13 112 1.72e-11 65.5
MS.gene072807.t1 AT3G24310 47.222 108 55 2 110 216 20 126 1.96e-22 97.1
MS.gene072807.t1 AT5G54230 45.098 102 55 1 110 210 14 115 1.99e-22 98.2
MS.gene072807.t1 AT3G12820 48.077 104 52 2 109 210 14 117 2.14e-22 96.3
MS.gene072807.t1 AT5G35550 39.655 116 69 1 103 217 9 124 2.39e-22 96.7
MS.gene072807.t1 AT3G13890 42.478 113 54 2 109 210 12 124 2.41e-22 98.6
MS.gene072807.t1 AT5G61420 48.077 104 53 1 108 210 12 115 6.09e-22 97.4
MS.gene072807.t1 AT5G12870 44.231 104 57 1 108 210 18 121 6.96e-22 95.9
MS.gene072807.t1 AT3G18100 37.671 146 87 2 58 203 450 591 7.25e-22 99.8
MS.gene072807.t1 AT3G18100 31.410 156 103 3 56 210 395 547 1.05e-19 92.8
MS.gene072807.t1 AT3G18100 32.558 129 79 3 91 217 375 497 3.81e-12 69.3
MS.gene072807.t1 AT3G18100 34.286 105 65 2 48 152 491 591 5.70e-12 68.6
MS.gene072807.t1 AT3G18100 37.671 146 87 2 58 203 498 639 7.48e-22 99.8
MS.gene072807.t1 AT3G18100 31.410 156 103 3 56 210 443 595 9.42e-20 93.2
MS.gene072807.t1 AT3G18100 32.558 129 79 3 91 217 423 545 3.15e-12 69.7
MS.gene072807.t1 AT3G18100 34.286 105 65 2 48 152 539 639 5.09e-12 68.9
MS.gene072807.t1 AT4G34990 45.098 102 55 1 110 210 14 115 9.12e-22 95.5
MS.gene072807.t1 AT3G18100 37.671 146 87 2 58 203 337 478 9.91e-22 99.0
MS.gene072807.t1 AT3G18100 31.410 156 103 3 56 210 282 434 1.40e-19 92.4
MS.gene072807.t1 AT3G18100 32.558 129 79 3 91 217 262 384 5.54e-12 68.6
MS.gene072807.t1 AT3G18100 34.286 105 65 2 48 152 378 478 5.59e-12 68.6
MS.gene072807.t1 AT3G18100 37.671 146 87 2 58 203 285 426 1.10e-21 99.0
MS.gene072807.t1 AT3G18100 31.410 156 103 3 56 210 230 382 1.53e-19 92.0
MS.gene072807.t1 AT3G18100 32.558 129 79 3 91 217 210 332 6.62e-12 68.2
MS.gene072807.t1 AT3G18100 34.286 105 65 2 48 152 326 426 7.04e-12 68.2
MS.gene072807.t1 AT1G63910 45.370 108 57 2 105 210 8 115 1.28e-21 96.7
MS.gene072807.t1 AT5G62470 43.564 101 57 0 110 210 14 114 1.48e-21 96.3
MS.gene072807.t1 AT2G16720 43.137 102 57 1 110 210 14 115 1.59e-21 94.4
MS.gene072807.t1 AT5G07690 48.544 103 52 1 108 209 12 114 2.00e-21 95.5
MS.gene072807.t1 AT3G47600 40.336 119 62 2 110 223 14 128 2.18e-21 95.5
MS.gene072807.t1 AT2G26960 31.674 221 128 6 108 311 20 234 2.55e-21 96.7
MS.gene072807.t1 AT5G55020 44.660 103 56 1 108 209 26 128 2.74e-21 97.1
MS.gene072807.t1 AT5G07700 47.115 104 54 1 108 210 12 115 2.87e-21 95.1
MS.gene072807.t1 AT5G07700 47.115 104 54 1 108 210 12 115 2.87e-21 95.1
MS.gene072807.t1 AT2G31180 46.226 106 55 2 109 212 12 117 4.39e-21 92.8
MS.gene072807.t1 AT1G16490 43.697 119 64 3 109 225 14 131 7.46e-21 92.8
MS.gene072807.t1 AT5G23000 49.524 105 50 3 109 210 12 116 8.98e-21 93.6
MS.gene072807.t1 AT1G74650 44.118 102 56 1 110 210 14 115 1.06e-20 93.2
MS.gene072807.t1 AT3G27810 38.571 140 74 3 107 245 19 147 1.15e-20 90.9
MS.gene072807.t1 AT3G27810 33.945 109 69 2 54 162 21 126 9.64e-11 62.0
MS.gene072807.t1 AT4G17785 42.157 102 58 1 110 210 15 116 1.51e-20 93.2
MS.gene072807.t1 AT3G01140 44.231 104 57 1 108 210 12 115 1.57e-20 93.2
MS.gene072807.t1 AT4G12350 43.810 105 57 2 108 210 11 115 1.63e-20 92.0
MS.gene072807.t1 AT4G17785 42.157 102 58 1 110 210 15 116 1.72e-20 93.2
MS.gene072807.t1 AT3G01140 44.231 104 57 1 108 210 55 158 1.97e-20 93.6
MS.gene072807.t1 AT5G40350 34.667 150 95 2 107 255 16 163 2.09e-20 90.1
MS.gene072807.t1 AT5G62470 43.396 106 51 2 110 210 14 115 2.22e-20 92.8
MS.gene072807.t1 AT3G28470 44.330 97 53 1 110 205 14 110 2.44e-20 92.0
MS.gene072807.t1 AT5G15310 43.269 104 58 1 108 210 12 115 2.89e-20 90.5
MS.gene072807.t1 AT1G08810 41.964 112 56 2 108 214 12 119 3.02e-20 91.3
MS.gene072807.t1 AT3G28910 43.137 102 57 1 110 210 14 115 3.56e-20 91.7
MS.gene072807.t1 AT4G25560 45.455 99 53 1 113 210 15 113 4.23e-20 90.9
MS.gene072807.t1 AT5G15310 43.269 104 58 1 108 210 12 115 4.70e-20 91.3
MS.gene072807.t1 AT5G15310 43.269 104 58 1 108 210 12 115 4.84e-20 91.3
MS.gene072807.t1 AT5G57620 47.573 103 52 2 110 210 14 116 5.06e-20 91.3
MS.gene072807.t1 AT1G06180 44.231 104 57 1 108 210 12 115 5.06e-20 89.7
MS.gene072807.t1 AT4G22680 45.098 102 55 1 110 210 14 115 6.14e-20 89.7
MS.gene072807.t1 AT1G25340 41.748 103 59 1 110 211 20 122 7.36e-20 90.1
MS.gene072807.t1 AT4G37780 46.729 107 47 3 110 210 14 116 7.62e-20 90.5
MS.gene072807.t1 AT5G60890 43.137 102 57 1 110 210 14 115 8.32e-20 90.1
MS.gene072807.t1 AT1G66230 45.192 104 56 1 108 210 12 115 8.44e-20 89.7
MS.gene072807.t1 AT2G26950 38.983 118 62 3 108 219 16 129 9.51e-20 91.3
MS.gene072807.t1 AT5G16600 46.154 104 55 1 108 210 12 115 9.68e-20 90.5
MS.gene072807.t1 AT1G14350 37.000 100 63 0 112 211 27 126 1.14e-19 91.7
MS.gene072807.t1 AT1G14350 37.000 100 63 0 112 211 27 126 1.14e-19 91.7
MS.gene072807.t1 AT1G68320 38.889 108 65 1 105 211 16 123 1.15e-19 89.4
MS.gene072807.t1 AT5G65790 44.340 106 57 2 107 210 11 116 1.89e-19 90.5
MS.gene072807.t1 AT3G49690 45.283 106 56 2 107 210 11 116 1.91e-19 89.4
MS.gene072807.t1 AT1G48000 39.091 110 64 2 113 221 37 144 3.35e-19 87.4
MS.gene072807.t1 AT1G25340 41.176 102 56 1 110 211 20 117 3.93e-19 87.8
MS.gene072807.t1 AT2G02820 36.000 100 64 0 112 211 32 131 3.94e-19 89.0
MS.gene072807.t1 AT3G60460 40.708 113 65 2 99 209 2 114 4.55e-19 88.2
MS.gene072807.t1 AT5G14340 41.346 104 60 1 108 210 24 127 4.71e-19 87.4
MS.gene072807.t1 AT5G52600 42.056 107 60 2 109 213 12 118 4.76e-19 85.9
MS.gene072807.t1 AT2G02820 36.000 100 64 0 112 211 32 131 4.95e-19 89.7
MS.gene072807.t1 AT3G01530 38.261 115 70 1 101 214 18 132 5.31e-19 85.9
MS.gene072807.t1 AT2G02820 36.000 100 64 0 112 211 32 131 5.55e-19 89.7
MS.gene072807.t1 AT3G12820 55.882 68 30 0 143 210 2 69 5.62e-19 85.1
MS.gene072807.t1 AT1G25340 41.176 102 56 1 110 211 20 117 5.93e-19 87.8
MS.gene072807.t1 AT1G18710 39.623 106 63 1 108 212 12 117 9.82e-19 86.3
MS.gene072807.t1 AT3G62610 43.269 104 58 1 108 210 12 115 1.14e-18 87.4
MS.gene072807.t1 AT5G49330 44.231 104 57 1 108 210 12 115 1.30e-18 87.4
MS.gene072807.t1 AT5G26660 36.424 151 70 5 120 257 5 142 1.66e-18 86.7
MS.gene072807.t1 AT2G36890 42.623 122 64 4 109 224 12 133 4.48e-18 85.1
MS.gene072807.t1 AT5G49620 38.793 116 68 2 107 221 25 138 5.02e-18 85.1
MS.gene072807.t1 AT1G66370 40.741 108 55 2 108 210 8 111 5.33e-18 84.0
MS.gene072807.t1 AT5G14750 48.529 68 35 0 143 210 18 85 5.44e-18 81.6
MS.gene072807.t1 AT2G36890 42.623 122 64 4 109 224 53 174 6.93e-18 85.1
MS.gene072807.t1 AT5G35550 48.000 75 39 0 143 217 53 127 7.03e-18 84.0
MS.gene072807.t1 AT3G53200 50.704 71 35 0 143 213 12 82 7.27e-18 82.4
MS.gene072807.t1 AT5G62320 41.441 111 57 2 108 210 13 123 8.36e-18 83.2
MS.gene072807.t1 AT2G47460 43.269 104 57 2 109 210 12 115 2.60e-17 84.0
MS.gene072807.t1 AT1G66380 41.071 112 57 2 104 210 4 111 2.69e-17 79.0
MS.gene072807.t1 AT3G06490 37.931 116 69 2 107 221 18 131 4.29e-17 82.8
MS.gene072807.t1 AT3G47600 45.679 81 44 0 143 223 42 122 5.94e-17 82.4
MS.gene072807.t1 AT1G56650 41.071 112 57 2 104 210 4 111 1.16e-16 80.1
MS.gene072807.t1 AT5G52260 43.434 99 55 1 113 210 17 115 3.13e-16 79.3
MS.gene072807.t1 AT5G59780 47.826 69 36 0 143 211 23 91 3.76e-16 77.8
MS.gene072807.t1 AT3G46130 47.826 69 36 0 143 211 13 81 6.08e-16 77.4
MS.gene072807.t1 AT1G66390 41.071 112 57 2 104 210 4 111 7.11e-16 77.8
MS.gene072807.t1 AT3G46130 47.826 69 36 0 143 211 23 91 7.12e-16 77.4
MS.gene072807.t1 AT3G27810 39.806 103 51 2 143 245 7 98 4.24e-15 73.9
MS.gene072807.t1 AT5G40350 34.513 113 72 1 143 255 8 118 7.69e-15 72.8
MS.gene072807.t1 AT5G49620 34.615 130 68 3 107 221 25 152 8.69e-15 75.9
MS.gene072807.t1 AT2G13960 38.211 123 59 5 3 116 19 133 2.13e-14 70.9
MS.gene072807.t1 AT2G37630 38.144 97 57 2 110 203 4 100 3.49e-14 74.3
MS.gene072807.t1 AT2G13960 51.613 62 27 1 55 116 40 98 3.56e-14 69.3
MS.gene072807.t1 AT2G13960 49.153 59 30 0 110 168 40 98 1.74e-11 61.6
MS.gene072807.t1 AT5G14750 45.614 57 31 0 154 210 2 58 9.20e-13 66.2
MS.gene072807.t1 AT5G14750 45.614 57 31 0 154 210 2 58 9.20e-13 66.2
MS.gene072807.t1 AT1G22640 49.123 57 29 0 154 210 2 58 3.93e-12 65.9
MS.gene072807.t1 AT3G23250 52.632 57 27 0 154 210 2 58 6.26e-12 65.9
MS.gene072807.t1 AT1G66380 45.588 68 37 0 143 210 11 78 6.69e-12 62.4
MS.gene072807.t1 AT1G09770 39.759 83 49 1 113 195 10 91 1.57e-11 67.4
MS.gene072807.t1 AT1G14350 32.143 84 44 1 128 211 13 83 1.97e-11 66.2
MS.gene072807.t1 AT1G14350 32.143 84 44 1 128 211 13 83 1.97e-11 66.2

Find 98 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATTTACTGCCATATATT+TGG 0.169401 5.3:-4216112 None:intergenic
TCGCCATTTGGGAAAATTAT+AGG 0.193856 5.3:-4216959 None:intergenic
AAGTTTCTTAGCACCGATTC+TGG 0.231780 5.3:-4217117 None:intergenic
GAGCTGAAGGATTTACAATT+TGG 0.232675 5.3:+4214432 MS.gene072807:CDS
CTCTTTAAGCTACTCAAAAT+TGG 0.234535 5.3:+4217035 MS.gene072807:CDS
CCTAAAGCAGGATGTGTAAT+TGG 0.235963 5.3:+4217255 MS.gene072807:CDS
ATCGCAAATTAGCTCGAAAA+AGG 0.239865 5.3:+4214758 MS.gene072807:CDS
GGATATGCTTGCAACAAATA+TGG 0.257399 5.3:+4216900 MS.gene072807:CDS
ATTCAACCAGTTACTTTGTT+TGG 0.258608 5.3:-4216662 None:intergenic
AGAACATTCCTTCTATTATA+AGG 0.263641 5.3:+4217154 MS.gene072807:CDS
CATCATTCCATGGAATTTCT+AGG 0.264210 5.3:-4217321 None:intergenic
CTTTCTTACTAGCTCAATTA+AGG 0.277662 5.3:-4215616 None:intergenic
ACCAAATATATGGCAGTAAA+TGG 0.297606 5.3:+4216111 MS.gene072807:CDS
CCAATTACACATCCTGCTTT+AGG 0.299396 5.3:-4217255 None:intergenic
ATTGAGCTAGTAAGAAAGTA+TGG 0.304423 5.3:+4215621 MS.gene072807:CDS
GTCCCAAACACCTTCTAAAA+TGG 0.308159 5.3:+4217221 MS.gene072807:CDS
AAGAGAAACCTTTCGCCATT+TGG 0.330050 5.3:-4216971 None:intergenic
ACAGATTCAAAGTTTATTGC+TGG 0.344818 5.3:+4216994 MS.gene072807:CDS
TTTCTCCCAAACAAAGTAAC+TGG 0.348007 5.3:+4216656 MS.gene072807:CDS
GCTCACTACTACCAAATATA+TGG 0.350001 5.3:+4216101 MS.gene072807:CDS
AGAGAAACCTTTCGCCATTT+GGG 0.351659 5.3:-4216970 None:intergenic
GTAACTGTTTCCATCTCATT+TGG 0.352658 5.3:-4216820 None:intergenic
TGAAGCAAGTCTCGATGATT+TGG 0.354497 5.3:-4214459 None:intergenic
TTCAACCAGTTACTTTGTTT+GGG 0.356118 5.3:-4216661 None:intergenic
ACAAGTGTCACTATTGCAAT+TGG 0.361751 5.3:-4214499 None:intergenic
TTTCGAATAAACACTCTAGT+TGG 0.364940 5.3:-4216703 None:intergenic
GCTGAAGATCAAAGTTTAGT+TGG 0.373736 5.3:+4216628 MS.gene072807:CDS
AAGAAGAGAAATGTTGGAAA+TGG 0.376076 5.3:+4214404 None:intergenic
TTTACAGCTGCATACTTCCC+TGG 0.377549 5.3:+4215398 MS.gene072807:intron
ATGCTTCCGTAGAGGAATTT+CGG 0.382073 5.3:+4216725 MS.gene072807:CDS
CTGGAATCATCCCCTGCTAC+AGG 0.382435 5.3:+4214525 MS.gene072807:CDS
GAAATTGCAAGGGTTCTTCC+TGG 0.388868 5.3:+4216137 MS.gene072807:CDS
TCATGCAGTGCTGACAAATA+TGG 0.415006 5.3:+4217195 MS.gene072807:CDS
TATTAGAGAAGAGCAGAAAC+TGG 0.419411 5.3:-4216581 None:intergenic
AGTTTCTTAGCACCGATTCT+GGG 0.426239 5.3:-4217116 None:intergenic
GTATCAGATAAGTACCTTCC+AGG 0.429985 5.3:-4216155 None:intergenic
GGGTGCTTGGACGGAGGAGG+AGG 0.459044 5.3:+4216067 MS.gene072807:CDS
TTCGAATAAACACTCTAGTT+GGG 0.460878 5.3:-4216702 None:intergenic
CATAGCATTTCATCATTCCA+TGG 0.466711 5.3:-4217331 None:intergenic
AGAGGCATGATGGAAGCATC+TGG 0.475066 5.3:+4215073 MS.gene072807:CDS
TCAGCACTGCATGACTTCCT+AGG 0.479875 5.3:-4217186 None:intergenic
AGAAATGTTGGAAATGGAAA+AGG 0.480080 5.3:+4214410 None:intergenic
ATGCTTCCATCGCTGGCAAA+AGG 0.480207 5.3:+4215436 MS.gene072807:CDS
AATAAAACCAGCACATGGTT+CGG 0.485028 5.3:+4216600 MS.gene072807:CDS
CGTGGCAACTCCTAGGGCCT+CGG 0.486566 5.3:+4216768 MS.gene072807:CDS
ACATTGAATGCTTCCATCGC+TGG 0.487314 5.3:+4215429 MS.gene072807:CDS
ATTCCTTCCTAGAAATTCCA+TGG 0.492413 5.3:+4217314 MS.gene072807:CDS
AATAGAAGGAATGTTCTCAT+AGG 0.496498 5.3:-4217148 None:intergenic
TTACAGCTGCATACTTCCCT+GGG 0.497263 5.3:+4215399 MS.gene072807:intron
CAAGAAACTTACCCTGTAGC+AGG 0.501547 5.3:-4214537 None:intergenic
GAAAGTATGGTTTCAAGAGA+TGG 0.502613 5.3:+4215634 MS.gene072807:CDS
CTGCGAAGGTAGGGTTGGCA+TGG 0.508501 5.3:-4216855 None:intergenic
GAAGAAAGTTCAAGTTGGAA+TGG 0.513032 5.3:+4217068 MS.gene072807:CDS
CAAGTGTCACTATTGCAATT+GGG 0.513710 5.3:-4214498 None:intergenic
ATGGAATTTCTAGGAAGGAA+TGG 0.513874 5.3:-4217312 None:intergenic
ATGTATTTATCTGCGAAGGT+AGG 0.514030 5.3:-4216865 None:intergenic
AGAAGAGCAGAAACTGGAAG+TGG 0.515412 5.3:-4216575 None:intergenic
GGAAGCATCTGGAAAAGTAT+AGG 0.516036 5.3:+4215084 MS.gene072807:CDS
CTTTCCGATACGACATGGCA+TGG 0.516615 5.3:-4215673 None:intergenic
AAGTAACAGTACTGGAAGAA+AGG 0.519260 5.3:-4216930 None:intergenic
AAATCCATGCCATGTCGTAT+CGG 0.520358 5.3:+4215669 MS.gene072807:CDS
TGTATTTATCTGCGAAGGTA+GGG 0.525550 5.3:-4216864 None:intergenic
GGTCAATTTACCAAATGAGA+TGG 0.526258 5.3:+4216810 MS.gene072807:CDS
TAAATACATGAACTCATCGT+TGG 0.526619 5.3:+4216879 MS.gene072807:CDS
GAAGGAATGGAACAAATCCT+TGG 0.526705 5.3:-4217299 None:intergenic
GCTTTAACCGAACCATGTGC+TGG 0.527242 5.3:-4216607 None:intergenic
ACATCCATGTCACATCTAGT+AGG 0.527575 5.3:-4216550 None:intergenic
CATGAGAAGAAAGTTCAAGT+TGG 0.527908 5.3:+4217063 MS.gene072807:CDS
CATTCAATGTCTGTTCGCCC+AGG 0.528988 5.3:-4215416 None:intergenic
TTATAAGGAAAAGATCTCCT+AGG 0.534381 5.3:+4217169 MS.gene072807:CDS
AAGCAACGTGAGCCCAGAAT+CGG 0.535475 5.3:+4217104 MS.gene072807:CDS
GGCCTCGTAAGTAACAGTAC+TGG 0.541786 5.3:-4216938 None:intergenic
TTTAATGATTCAGGAGGATG+AGG 0.543461 5.3:+4215593 MS.gene072807:intron
GAGATAGTCAAGAGGCATGA+TGG 0.545735 5.3:+4215063 MS.gene072807:CDS
AAAGGGTGCTTGGACGGAGG+AGG 0.550944 5.3:+4216064 MS.gene072807:CDS
GTAAATGGTCAGAAATTGCA+AGG 0.561504 5.3:+4216126 MS.gene072807:CDS
GCTATCACAACTCCTAAAGC+AGG 0.569904 5.3:+4217243 MS.gene072807:CDS
GTTCATGTATTTATCTGCGA+AGG 0.570468 5.3:-4216869 None:intergenic
TTGCAAGGGTTCTTCCTGGA+AGG 0.579944 5.3:+4216141 MS.gene072807:CDS
GGAAATGGAAAAGGAGCTGA+AGG 0.585968 5.3:+4214419 MS.gene072807:CDS
ATCAGACCGAAATTCCTCTA+CGG 0.589229 5.3:-4216731 None:intergenic
TGGAAAAGTATAGGTGGATG+CGG 0.589791 5.3:+4215093 MS.gene072807:CDS
TTTATCTGCGAAGGTAGGGT+TGG 0.592406 5.3:-4216860 None:intergenic
TCGGAAAGCAATGTCGAGAG+AGG 0.597044 5.3:+4215688 MS.gene072807:CDS
GGGAATCTGGACAGAAGAAG+AGG 0.598281 5.3:+4214779 MS.gene072807:CDS
TGGAATCATCCCCTGCTACA+GGG 0.598641 5.3:+4214526 MS.gene072807:CDS
TTCCAGTACTGTTACTTACG+AGG 0.600409 5.3:+4216936 MS.gene072807:CDS
ATTCCATGGAATTTCTAGGA+AGG 0.603209 5.3:-4217317 None:intergenic
AGCATCTGGAAAAGTATAGG+TGG 0.605541 5.3:+4215087 MS.gene072807:CDS
AAGAAACTTACCCTGTAGCA+GGG 0.611048 5.3:-4214536 None:intergenic
CATTGCTTTCCGATACGACA+TGG 0.615803 5.3:-4215678 None:intergenic
ATTCAATGTCTGTTCGCCCA+GGG 0.615954 5.3:-4215415 None:intergenic
GATAATTTAAAACTCAACCA+AGG 0.617456 5.3:+4217282 MS.gene072807:CDS
TATTCGAAATGCTTCCGTAG+AGG 0.625592 5.3:+4216717 MS.gene072807:CDS
ATCACCTACTAGATGTGACA+TGG 0.666242 5.3:+4216546 MS.gene072807:CDS
AGAAACTTACCCTGTAGCAG+GGG 0.678985 5.3:-4214535 None:intergenic
TCTCTAATAAAACCAGCACA+TGG 0.683247 5.3:+4216595 MS.gene072807:CDS
TAAATGGTCAGAAATTGCAA+GGG 0.701805 5.3:+4216127 MS.gene072807:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATAAATAATATTCTGT+AGG + chr5.3:4215846-4215865 MS.gene072807:intron 15.0%
!!! GTACAAATTTTAACTATTAT+TGG + chr5.3:4214898-4214917 MS.gene072807:intron 15.0%
!! AACATAATAAATACCACAAA+AGG - chr5.3:4214967-4214986 None:intergenic 20.0%
!! ACAATGCTATAAAAAATCAT+TGG + chr5.3:4216494-4216513 MS.gene072807:CDS 20.0%
!! TTTGTGGTATTTATTATGTT+AGG + chr5.3:4214967-4214986 MS.gene072807:intron 20.0%
!!! AAGTGAAGTCAATTTTTTAA+AGG + chr5.3:4214576-4214595 MS.gene072807:intron 20.0%
!!! CATTTTATTGATATTTATGC+AGG - chr5.3:4216238-4216257 None:intergenic 20.0%
!!! CTTTTTAAGAAACATACTTA+TGG - chr5.3:4215975-4215994 None:intergenic 20.0%
!!! TTATGCTATATTTTATCATG+AGG - chr5.3:4215276-4215295 None:intergenic 20.0%
!!! TTTCACAATTTTTGTTTGAT+AGG + chr5.3:4214727-4214746 MS.gene072807:intron 20.0%
!!! TTTCTGTCTTTGATTTTTTA+GGG - chr5.3:4216366-4216385 None:intergenic 20.0%
!!! TTTTCTGTCTTTGATTTTTT+AGG - chr5.3:4216367-4216386 None:intergenic 20.0%
! AGAACATTCCTTCTATTATA+AGG + chr5.3:4217154-4217173 MS.gene072807:CDS 25.0%
! ATAATGCAACAAACTACATT+TGG - chr5.3:4214695-4214714 None:intergenic 25.0%
! ATCTAATTCGTTGTATCATA+TGG + chr5.3:4216457-4216476 MS.gene072807:intron 25.0%
! ATGATCTTGTAAAAAGATCA+TGG + chr5.3:4215468-4215487 MS.gene072807:CDS 25.0%
! GTTTATAACTCAAACTAATC+TGG + chr5.3:4215360-4215379 MS.gene072807:intron 25.0%
! TCTAATTCGTTGTATCATAT+GGG + chr5.3:4216458-4216477 MS.gene072807:intron 25.0%
! TTGAAGCATGTATTTATAGA+GGG - chr5.3:4216213-4216232 None:intergenic 25.0%
!! AATGAGTTTAACTGCATTTT+GGG + chr5.3:4215203-4215222 MS.gene072807:intron 25.0%
!! GATAATTTAAAACTCAACCA+AGG + chr5.3:4217282-4217301 MS.gene072807:CDS 25.0%
!! GATCTTTTCCTTATAATAGA+AGG - chr5.3:4217165-4217184 None:intergenic 25.0%
!! TAATGAGTTTAACTGCATTT+TGG + chr5.3:4215202-4215221 MS.gene072807:intron 25.0%
!! TTTGAAGCATGTATTTATAG+AGG - chr5.3:4216214-4216233 None:intergenic 25.0%
!!! ACAAAAGTTGTCATTTTCAA+AGG - chr5.3:4215813-4215832 None:intergenic 25.0%
AACTAATCTGGTTGTTCAAT+TGG + chr5.3:4215372-4215391 MS.gene072807:intron 30.0%
AACTACTAGGTAATCATTTC+AGG + chr5.3:4216012-4216031 MS.gene072807:intron 30.0%
AATAGAAGGAATGTTCTCAT+AGG - chr5.3:4217151-4217170 None:intergenic 30.0%
ACAGATTCAAAGTTTATTGC+TGG + chr5.3:4216994-4217013 MS.gene072807:CDS 30.0%
ACCAAATATATGGCAGTAAA+TGG + chr5.3:4216111-4216130 MS.gene072807:CDS 30.0%
ACCATTTACTGCCATATATT+TGG - chr5.3:4216115-4216134 None:intergenic 30.0%
ATTGAGCTAGTAAGAAAGTA+TGG + chr5.3:4215621-4215640 MS.gene072807:CDS 30.0%
CTCTTTAAGCTACTCAAAAT+TGG + chr5.3:4217035-4217054 MS.gene072807:CDS 30.0%
CTTTCTTACTAGCTCAATTA+AGG - chr5.3:4215619-4215638 None:intergenic 30.0%
GGAAAAAAGTGAAAGAAGAT+TGG + chr5.3:4216789-4216808 MS.gene072807:CDS 30.0%
TAAATACATGAACTCATCGT+TGG + chr5.3:4216879-4216898 MS.gene072807:CDS 30.0%
TAAATGGTCAGAAATTGCAA+GGG + chr5.3:4216127-4216146 MS.gene072807:CDS 30.0%
TACTTCCATCTCTTGAAATT+AGG - chr5.3:4215740-4215759 None:intergenic 30.0%
TGTAAAAAGATCATGGACAA+AGG + chr5.3:4215475-4215494 MS.gene072807:CDS 30.0%
TTACCTAGTAGTTCATATTC+TGG - chr5.3:4216005-4216024 None:intergenic 30.0%
TTATAAGGAAAAGATCTCCT+AGG + chr5.3:4217169-4217188 MS.gene072807:CDS 30.0%
TTCGAATAAACACTCTAGTT+GGG - chr5.3:4216705-4216724 None:intergenic 30.0%
TTTATTGTGCCAATATGTGT+TGG + chr5.3:4215534-4215553 MS.gene072807:intron 30.0%
TTTCGAATAAACACTCTAGT+TGG - chr5.3:4216706-4216725 None:intergenic 30.0%
! ATTCAACCAGTTACTTTGTT+TGG - chr5.3:4216665-4216684 None:intergenic 30.0%
! ATTTTGCAATCTCATGACTA+TGG + chr5.3:4215018-4215037 MS.gene072807:intron 30.0%
! CGGTCTGATAAAAACATTTT+TGG + chr5.3:4216745-4216764 MS.gene072807:CDS 30.0%
! TTCAACCAGTTACTTTGTTT+GGG - chr5.3:4216664-4216683 None:intergenic 30.0%
! TTCTATGCTTTGAATCAGAT+TGG + chr5.3:4215884-4215903 MS.gene072807:intron 30.0%
! TTTTCAAAGGAATAGCATCA+TGG - chr5.3:4215800-4215819 None:intergenic 30.0%
!! CAATTTTGAGTAGCTTAAAG+AGG - chr5.3:4217037-4217056 None:intergenic 30.0%
!! TTGTCTTTGTTATCCTTTTG+TGG + chr5.3:4214951-4214970 MS.gene072807:intron 30.0%
!! TTTTGATTGAGATAGTCAAG+AGG + chr5.3:4215055-4215074 MS.gene072807:CDS 30.0%
!!! ACTCGAAAGTGATTTTTTTG+AGG + chr5.3:4216265-4216284 MS.gene072807:intron 30.0%
!!! TGATAAAAACATTTTTGGCG+TGG + chr5.3:4216750-4216769 MS.gene072807:CDS 30.0%
AAAAAGATCATGGACAAAGG+AGG + chr5.3:4215478-4215497 MS.gene072807:CDS 35.0%
AATAAAACCAGCACATGGTT+CGG + chr5.3:4216600-4216619 MS.gene072807:CDS 35.0%
ATCGCAAATTAGCTCGAAAA+AGG + chr5.3:4214758-4214777 MS.gene072807:CDS 35.0%
ATGTATTTATCTGCGAAGGT+AGG - chr5.3:4216868-4216887 None:intergenic 35.0%
ATTCCTTCCTAGAAATTCCA+TGG + chr5.3:4217314-4217333 MS.gene072807:CDS 35.0%
CATGAGAAGAAAGTTCAAGT+TGG + chr5.3:4217063-4217082 MS.gene072807:CDS 35.0%
CCTGAATCATTAAATGCAGA+AGG - chr5.3:4215587-4215606 None:intergenic 35.0%
CCTTCTGCATTTAATGATTC+AGG + chr5.3:4215584-4215603 MS.gene072807:intron 35.0%
CTCACTGAAAAAGAAGTCAT+CGG + chr5.3:4216522-4216541 MS.gene072807:CDS 35.0%
CTTAACTGTGACGTTTGATT+TGG + chr5.3:4214844-4214863 MS.gene072807:intron 35.0%
CTTGATCCCGCTATAAAAAA+GGG + chr5.3:4216047-4216066 MS.gene072807:CDS 35.0%
GAGCTGAAGGATTTACAATT+TGG + chr5.3:4214432-4214451 MS.gene072807:CDS 35.0%
GCATTTCAACCAACACATAT+TGG - chr5.3:4215546-4215565 None:intergenic 35.0%
GCTCACTACTACCAAATATA+TGG + chr5.3:4216101-4216120 MS.gene072807:CDS 35.0%
GCTGAAGATCAAAGTTTAGT+TGG + chr5.3:4216628-4216647 MS.gene072807:CDS 35.0%
GGATATGCTTGCAACAAATA+TGG + chr5.3:4216900-4216919 MS.gene072807:CDS 35.0%
GGTCAATTTACCAAATGAGA+TGG + chr5.3:4216810-4216829 MS.gene072807:CDS 35.0%
GTAAATGGTCAGAAATTGCA+AGG + chr5.3:4216126-4216145 MS.gene072807:CDS 35.0%
GTAACTGTTTCCATCTCATT+TGG - chr5.3:4216823-4216842 None:intergenic 35.0%
GTTCATGTATTTATCTGCGA+AGG - chr5.3:4216872-4216891 None:intergenic 35.0%
TACTAGGTAATCATTTCAGG+TGG + chr5.3:4216015-4216034 MS.gene072807:intron 35.0%
TATTAGAGAAGAGCAGAAAC+TGG - chr5.3:4216584-4216603 None:intergenic 35.0%
TCGCAAATTAGCTCGAAAAA+GGG + chr5.3:4214759-4214778 MS.gene072807:CDS 35.0%
TCGCCATTTGGGAAAATTAT+AGG - chr5.3:4216962-4216981 None:intergenic 35.0%
TCTCTAATAAAACCAGCACA+TGG + chr5.3:4216595-4216614 MS.gene072807:CDS 35.0%
TCTGCATTTAATGATTCAGG+AGG + chr5.3:4215587-4215606 MS.gene072807:intron 35.0%
TGTATTTATCTGCGAAGGTA+GGG - chr5.3:4216867-4216886 None:intergenic 35.0%
TTGCCAGAATATGAACTACT+AGG + chr5.3:4215999-4216018 MS.gene072807:intron 35.0%
TTTAATGATTCAGGAGGATG+AGG + chr5.3:4215593-4215612 MS.gene072807:intron 35.0%
TTTCTCCCAAACAAAGTAAC+TGG + chr5.3:4216656-4216675 MS.gene072807:CDS 35.0%
! AAGTAACAGTACTGGAAGAA+AGG - chr5.3:4216933-4216952 None:intergenic 35.0%
! ACAAGTGTCACTATTGCAAT+TGG - chr5.3:4214502-4214521 None:intergenic 35.0%
! AGGCCTATAATTTTCCCAAA+TGG + chr5.3:4216956-4216975 MS.gene072807:CDS 35.0%
! ATGGAATTTCTAGGAAGGAA+TGG - chr5.3:4217315-4217334 None:intergenic 35.0%
! ATTCCATGGAATTTCTAGGA+AGG - chr5.3:4217320-4217339 None:intergenic 35.0%
! CAAGTGTCACTATTGCAATT+GGG - chr5.3:4214501-4214520 None:intergenic 35.0%
! GAAAGTATGGTTTCAAGAGA+TGG + chr5.3:4215634-4215653 MS.gene072807:CDS 35.0%
! GCATCTTTTGAACACACTTT+TGG - chr5.3:4216301-4216320 None:intergenic 35.0%
! TAATTTTCCCAAATGGCGAA+AGG + chr5.3:4216963-4216982 MS.gene072807:CDS 35.0%
! TTTTATAGCATTGTCACTCC+TGG - chr5.3:4216488-4216507 None:intergenic 35.0%
! TTTTGAACACACTTTTGGTG+AGG - chr5.3:4216296-4216315 None:intergenic 35.0%
!! ATTCTGTAGGCTTTTTCTGT+TGG + chr5.3:4215859-4215878 MS.gene072807:intron 35.0%
!! CAATAGTGACACTTGTTTTC+TGG + chr5.3:4214506-4214525 MS.gene072807:CDS 35.0%
!! GAAGAAAGTTCAAGTTGGAA+TGG + chr5.3:4217068-4217087 MS.gene072807:CDS 35.0%
!! GTTGTGATAGCCATTTTAGA+AGG - chr5.3:4217234-4217253 None:intergenic 35.0%
!! TATAAAAAAGGGTGCTTGGA+CGG + chr5.3:4216058-4216077 MS.gene072807:CDS 35.0%
!! TGTGACGTTTGATTTGGTTA+AGG + chr5.3:4214850-4214869 MS.gene072807:intron 35.0%
!! TTGATTTGGTTAAGGCTCAA+GGG + chr5.3:4214858-4214877 MS.gene072807:intron 35.0%
!! TTTGATTTGGTTAAGGCTCA+AGG + chr5.3:4214857-4214876 MS.gene072807:intron 35.0%
!!! AGCCATTTTAGAAGGTGTTT+GGG - chr5.3:4217226-4217245 None:intergenic 35.0%
!!! GTCTTTGATTTTTTAGGGAG+AGG - chr5.3:4216361-4216380 None:intergenic 35.0%
!!! TAGCCATTTTAGAAGGTGTT+TGG - chr5.3:4217227-4217246 None:intergenic 35.0%
!!! TCTTCTTTCACTTTTTTCCG+AGG - chr5.3:4216788-4216807 None:intergenic 35.0%
AAATCCATGCCATGTCGTAT+CGG + chr5.3:4215669-4215688 MS.gene072807:CDS 40.0%
AAGAAACTTACCCTGTAGCA+GGG - chr5.3:4214539-4214558 None:intergenic 40.0%
AAGAGAAACCTTTCGCCATT+TGG - chr5.3:4216974-4216993 None:intergenic 40.0%
ACATCCATGTCACATCTAGT+AGG - chr5.3:4216553-4216572 None:intergenic 40.0%
AGAGAAACCTTTCGCCATTT+GGG - chr5.3:4216973-4216992 None:intergenic 40.0%
ATCACCTACTAGATGTGACA+TGG + chr5.3:4216546-4216565 MS.gene072807:CDS 40.0%
ATCAGACCGAAATTCCTCTA+CGG - chr5.3:4216734-4216753 None:intergenic 40.0%
ATCTCATGACTATGGCAAAC+AGG + chr5.3:4215026-4215045 MS.gene072807:intron 40.0%
ATGCTTCCGTAGAGGAATTT+CGG + chr5.3:4216725-4216744 MS.gene072807:CDS 40.0%
CAGAGCCTAATTTCAAGAGA+TGG + chr5.3:4215732-4215751 MS.gene072807:intron 40.0%
CAGTGAGTTTGCCAGTATTA+CGG + chr5.3:4214626-4214645 MS.gene072807:intron 40.0%
CCAATTACACATCCTGCTTT+AGG - chr5.3:4217258-4217277 None:intergenic 40.0%
CCTAAAGCAGGATGTGTAAT+TGG + chr5.3:4217255-4217274 MS.gene072807:CDS 40.0%
CCTTGATCCCGCTATAAAAA+AGG + chr5.3:4216046-4216065 MS.gene072807:CDS 40.0%
GAAGGAATGGAACAAATCCT+TGG - chr5.3:4217302-4217321 None:intergenic 40.0%
GAGGTTGTGACAGAACTAAT+AGG - chr5.3:4216342-4216361 None:intergenic 40.0%
GTATCAGATAAGTACCTTCC+AGG - chr5.3:4216158-4216177 None:intergenic 40.0%
GTCGTTTCGAAATGCATGTT+TGG + chr5.3:4214598-4214617 MS.gene072807:intron 40.0%
TATAAGTGCATTCCTGAAGC+AGG + chr5.3:4216418-4216437 MS.gene072807:intron 40.0%
TATTCGAAATGCTTCCGTAG+AGG + chr5.3:4216717-4216736 MS.gene072807:CDS 40.0%
TGAAGCAAGTCTCGATGATT+TGG - chr5.3:4214462-4214481 None:intergenic 40.0%
TGAATATATGTGCCTGCTTC+AGG - chr5.3:4216433-4216452 None:intergenic 40.0%
TTAGCTCGAAAAAGGGAATC+TGG + chr5.3:4214766-4214785 MS.gene072807:CDS 40.0%
TTGTATCATATGGGTAAGCC+AGG + chr5.3:4216467-4216486 MS.gene072807:intron 40.0%
TTTGCCAGTATTACGGTTCA+CGG + chr5.3:4214633-4214652 MS.gene072807:intron 40.0%
! AGCATCTGGAAAAGTATAGG+TGG + chr5.3:4215087-4215106 MS.gene072807:CDS 40.0%
! GTCCCAAACACCTTCTAAAA+TGG + chr5.3:4217221-4217240 MS.gene072807:CDS 40.0%
! TGGAAAAGTATAGGTGGATG+CGG + chr5.3:4215093-4215112 MS.gene072807:CDS 40.0%
! TTCCAGTACTGTTACTTACG+AGG + chr5.3:4216936-4216955 MS.gene072807:CDS 40.0%
!! AAGTTTCTTAGCACCGATTC+TGG - chr5.3:4217120-4217139 None:intergenic 40.0%
!! AGTTTCTTAGCACCGATTCT+GGG - chr5.3:4217119-4217138 None:intergenic 40.0%
!! GGAAGCATCTGGAAAAGTAT+AGG + chr5.3:4215084-4215103 MS.gene072807:CDS 40.0%
!! TCATGCAGTGCTGACAAATA+TGG + chr5.3:4217195-4217214 MS.gene072807:CDS 40.0%
!! TGTGTTGGTTGAAATGCTGA+TGG + chr5.3:4215549-4215568 MS.gene072807:intron 40.0%
!!! CAAGCACCCTTTTTTATAGC+GGG - chr5.3:4216056-4216075 None:intergenic 40.0%
!!! CCAAGCACCCTTTTTTATAG+CGG - chr5.3:4216057-4216076 None:intergenic 40.0%
!!! CCTTTTTTATAGCGGGATCA+AGG - chr5.3:4216049-4216068 None:intergenic 40.0%
AAAGCAATGTCGAGAGAGGT+AGG + chr5.3:4215692-4215711 MS.gene072807:intron 45.0%
ACATTGAATGCTTCCATCGC+TGG + chr5.3:4215429-4215448 MS.gene072807:CDS 45.0%
AGAAACTTACCCTGTAGCAG+GGG - chr5.3:4214538-4214557 None:intergenic 45.0%
AGAAGAGCAGAAACTGGAAG+TGG - chr5.3:4216578-4216597 None:intergenic 45.0%
ATTCAATGTCTGTTCGCCCA+GGG - chr5.3:4215418-4215437 None:intergenic 45.0%
CAAGAAACTTACCCTGTAGC+AGG - chr5.3:4214540-4214559 None:intergenic 45.0%
CATTGCTTTCCGATACGACA+TGG - chr5.3:4215681-4215700 None:intergenic 45.0%
CTCAAGTCTCAACATTGCAG+TGG - chr5.3:4215236-4215255 None:intergenic 45.0%
CTGCTACAGGGTAAGTTTCT+TGG + chr5.3:4214538-4214557 MS.gene072807:intron 45.0%
GAAATTGCAAGGGTTCTTCC+TGG + chr5.3:4216137-4216156 MS.gene072807:CDS 45.0%
GCTATCACAACTCCTAAAGC+AGG + chr5.3:4217243-4217262 MS.gene072807:CDS 45.0%
GGAAATGGAAAAGGAGCTGA+AGG + chr5.3:4214419-4214438 MS.gene072807:CDS 45.0%
TTACAGCTGCATACTTCCCT+GGG + chr5.3:4215399-4215418 MS.gene072807:intron 45.0%
TTTACAGCTGCATACTTCCC+TGG + chr5.3:4215398-4215417 MS.gene072807:intron 45.0%
TTTATCTGCGAAGGTAGGGT+TGG - chr5.3:4216863-4216882 None:intergenic 45.0%
! CATGTATTTATAGAGGGCGC+AGG - chr5.3:4216207-4216226 None:intergenic 45.0%
! GAGATAGTCAAGAGGCATGA+TGG + chr5.3:4215063-4215082 MS.gene072807:CDS 45.0%
!! AGGGTAAGTTTCTTGGTGCT+TGG + chr5.3:4214545-4214564 MS.gene072807:intron 45.0%
!! CCGCTATAAAAAAGGGTGCT+TGG + chr5.3:4216054-4216073 MS.gene072807:CDS 45.0%
!! GGGTAAGTTTCTTGGTGCTT+GGG + chr5.3:4214546-4214565 MS.gene072807:intron 45.0%
AAGCAACGTGAGCCCAGAAT+CGG + chr5.3:4217104-4217123 MS.gene072807:CDS 50.0%
ATGCTTCCATCGCTGGCAAA+AGG + chr5.3:4215436-4215455 MS.gene072807:CDS 50.0%
CATTCAATGTCTGTTCGCCC+AGG - chr5.3:4215419-4215438 None:intergenic 50.0%
CTTTCCGATACGACATGGCA+TGG - chr5.3:4215676-4215695 None:intergenic 50.0%
GCTTTAACCGAACCATGTGC+TGG - chr5.3:4216610-4216629 None:intergenic 50.0%
GGCCTCGTAAGTAACAGTAC+TGG - chr5.3:4216941-4216960 None:intergenic 50.0%
GGGAATCTGGACAGAAGAAG+AGG + chr5.3:4214779-4214798 MS.gene072807:CDS 50.0%
TCAGCACTGCATGACTTCCT+AGG - chr5.3:4217189-4217208 None:intergenic 50.0%
TCGGAAAGCAATGTCGAGAG+AGG + chr5.3:4215688-4215707 MS.gene072807:CDS 50.0%
TGGAATCATCCCCTGCTACA+GGG + chr5.3:4214526-4214545 MS.gene072807:CDS 50.0%
TTGCAAGGGTTCTTCCTGGA+AGG + chr5.3:4216141-4216160 MS.gene072807:CDS 50.0%
! TCGAAACCTTTTGCCAGCGA+TGG - chr5.3:4215445-4215464 None:intergenic 50.0%
! TTTTGGCGTGGCAACTCCTA+GGG + chr5.3:4216762-4216781 MS.gene072807:CDS 50.0%
!! AAAAAAGGGTGCTTGGACGG+AGG + chr5.3:4216061-4216080 MS.gene072807:CDS 50.0%
!! AGAGGCATGATGGAAGCATC+TGG + chr5.3:4215073-4215092 MS.gene072807:CDS 50.0%
!! TTTTTGGCGTGGCAACTCCT+AGG + chr5.3:4216761-4216780 MS.gene072807:CDS 50.0%
!!! TCACTTTTTTCCGAGGCCCT+AGG - chr5.3:4216781-4216800 None:intergenic 50.0%
ACGGTGGCTCACTGTGAATC+AGG + chr5.3:4214652-4214671 MS.gene072807:intron 55.0%
CTGGAATCATCCCCTGCTAC+AGG + chr5.3:4214525-4214544 MS.gene072807:CDS 55.0%
GCCACCGTGAACCGTAATAC+TGG - chr5.3:4214640-4214659 None:intergenic 55.0%
GCCAGTATTACGGTTCACGG+TGG + chr5.3:4214636-4214655 MS.gene072807:intron 55.0%
! CTGCGAAGGTAGGGTTGGCA+TGG - chr5.3:4216858-4216877 None:intergenic 60.0%
!! AAAGGGTGCTTGGACGGAGG+AGG + chr5.3:4216064-4216083 MS.gene072807:CDS 60.0%
CGTGGCAACTCCTAGGGCCT+CGG + chr5.3:4216768-4216787 MS.gene072807:CDS 65.0%
GGGTGCTTGGACGGAGGAGG+AGG + chr5.3:4216067-4216086 MS.gene072807:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 4214414 4217341 4214414 ID=MS.gene072807
chr5.3 mRNA 4214414 4217341 4214414 ID=MS.gene072807.t1;Parent=MS.gene072807
chr5.3 exon 4214414 4214547 4214414 ID=MS.gene072807.t1.exon1;Parent=MS.gene072807.t1
chr5.3 CDS 4214414 4214547 4214414 ID=cds.MS.gene072807.t1;Parent=MS.gene072807.t1
chr5.3 exon 4214749 4214800 4214749 ID=MS.gene072807.t1.exon2;Parent=MS.gene072807.t1
chr5.3 CDS 4214749 4214800 4214749 ID=cds.MS.gene072807.t1;Parent=MS.gene072807.t1
chr5.3 exon 4215048 4215114 4215048 ID=MS.gene072807.t1.exon3;Parent=MS.gene072807.t1
chr5.3 CDS 4215048 4215114 4215048 ID=cds.MS.gene072807.t1;Parent=MS.gene072807.t1
chr5.3 exon 4215405 4215499 4215405 ID=MS.gene072807.t1.exon4;Parent=MS.gene072807.t1
chr5.3 CDS 4215405 4215499 4215405 ID=cds.MS.gene072807.t1;Parent=MS.gene072807.t1
chr5.3 exon 4215606 4215709 4215606 ID=MS.gene072807.t1.exon5;Parent=MS.gene072807.t1
chr5.3 CDS 4215606 4215709 4215606 ID=cds.MS.gene072807.t1;Parent=MS.gene072807.t1
chr5.3 exon 4216034 4216162 4216034 ID=MS.gene072807.t1.exon6;Parent=MS.gene072807.t1
chr5.3 CDS 4216034 4216162 4216034 ID=cds.MS.gene072807.t1;Parent=MS.gene072807.t1
chr5.3 exon 4216489 4217341 4216489 ID=MS.gene072807.t1.exon7;Parent=MS.gene072807.t1
chr5.3 CDS 4216489 4217341 4216489 ID=cds.MS.gene072807.t1;Parent=MS.gene072807.t1
Gene Sequence

>MS.gene072807

ATGTTGGAAATGGAAAAGGAGCTGAAGGATTTACAATTTGGTTCACCAAATCATCGAGACTTGCTTCATTTATGTCTCTCTTCACCCAATTGCAATAGTGACACTTGTTTTCTGGAATCATCCCCTGCTACAGGGTAAGTTTCTTGGTGCTTGGGACTTTTAAAGTGAAGTCAATTTTTTAAAGGTCGTTTCGAAATGCATGTTTGGTATCACAGTGAGTTTGCCAGTATTACGGTTCACGGTGGCTCACTGTGAATCAGGAAGACTCATCAGTGATACCAAATGTAGTTTGTTGCATTATTGCTTTAATAATTTTCACAATTTTTGTTTGATAGGAAAATAAAATCGCAAATTAGCTCGAAAAAGGGAATCTGGACAGAAGAAGAGGTATGTACGTTGCTTTAATTTAAAATCATTAGTAATATAGTTTCTTAACTGTGACGTTTGATTTGGTTAAGGCTCAAGGGCTATTGAAATATTTGTTGTACAAATTTTAACTATTATTGGAAGTTGCAATTTTTGTTCTTATACTCTTTTTTGTCTTTGTTATCCTTTTGTGGTATTTATTATGTTAGGTTGCAATTTACAGTGTTAATGCTCTCTGATTTTGCAATCTCATGACTATGGCAAACAGGATAATCTTTTGATTGAGATAGTCAAGAGGCATGATGGAAGCATCTGGAAAAGTATAGGTGGATGCGGTAATATATCAGTATATTTATCAATTTGAATTGAACTATTAGTTTATAATTACTCTTTTTTTTTTTTTTTCGTTCGCTAAATTAACATAATGAGTTTAACTGCATTTTGGGTTTTACTCCACTGCAATGTTGAGACTTGAGAGAAGCAAGTGTTTGTTCCTCATGATAAAATATAGCATAAGTAGATACTGTTTGTGACATTATTTGTCATCATTGTAGATTTTTACTATATGTATTTTTATCTCGTTTATAACTCAAACTAATCTGGTTGTTCAATTGGTCTTTTACAGCTGCATACTTCCCTGGGCGAACAGACATTGAATGCTTCCATCGCTGGCAAAAGGTTTCGAATCATGATCTTGTAAAAAGATCATGGACAAAGGAGGTGCTCTTTTAGTGTAAACACTTGTTATAATTTTTTTATTGTGCCAATATGTGTTGGTTGAAATGCTGATGGTGATTGTTGTCTCCTTCTGCATTTAATGATTCAGGAGGATGAGGCCTTAATTGAGCTAGTAAGAAAGTATGGTTTCAAGAGATGGTCTTTTATTGCGAAATCCATGCCATGTCGTATCGGAAAGCAATGTCGAGAGAGGTAGGCAGTTATAAATGTTAGTCAGAGCCTAATTTCAAGAGATGGAAGTATACTGTGAATTTGTGTTTTATTCTTTTAGATGTATTGCCATGATGCTATTCCTTTGAAAATGACAACTTTTGTGTGCAATTTTATCATTCATAAATAATATTCTGTAGGCTTTTTCTGTTGGATTTCTATGCTTTGAATCAGATTGGTCATCTTCATTCATATGTTTCTAAGTATCAAATCATCGATATTATATTTTGCAGATCACTATATTCCATAAGTATGTTTCTTAAAAAGTATGTTGCCAGAATATGAACTACTAGGTAATCATTTCAGGTGGCATAATAACCTTGATCCCGCTATAAAAAAGGGTGCTTGGACGGAGGAGGAGGAGTCAATACTTGCTCACTACTACCAAATATATGGCAGTAAATGGTCAGAAATTGCAAGGGTTCTTCCTGGAAGGTACTTATCTGATACTGTTGTCTGTTATGCAGAATTTTCAACCTGCGCCCTCTATAAATACATGCTTCAAAACCTGCATAAATATCAATAAAATGATAACTTACTCGAAAGTGATTTTTTTGAGGATATACCTCACCAAAAGTGTGTTCAAAAGATGCGTTAGTTTTTCTCAGCAACCTATTAGTTCTGTCACAACCTCTCCCTAAAAAATCAAAGACAGAAAATTAGAACAATTATACTTGAGCTATTGATAAATATAAGTGCATTCCTGAAGCAGGCACATATATTCATAATATCTAATTCGTTGTATCATATGGGTAAGCCAGGAGTGACAATGCTATAAAAAATCATTGGAACAGCTCACTGAAAAAGAAGTCATCGGCATCACCTACTAGATGTGACATGGATGTTTCCACTTCCAGTTTCTGCTCTTCTCTAATAAAACCAGCACATGGTTCGGTTAAAGCTGAAGATCAAAGTTTAGTTGGAATAGTTTCTCCCAAACAAAGTAACTGGTTGAATCACAATGCTGATAGCTTCCCAACTAGAGTGTTTATTCGAAATGCTTCCGTAGAGGAATTTCGGTCTGATAAAAACATTTTTGGCGTGGCAACTCCTAGGGCCTCGGAAAAAAGTGAAAGAAGATTGGTCAATTTACCAAATGAGATGGAAACAGTTACATGCTTCAAAAACCATGCCAACCCTACCTTCGCAGATAAATACATGAACTCATCGTTGGATATGCTTGCAACAAATATGGATTGTTTCCTTTCTTCCAGTACTGTTACTTACGAGGCCTATAATTTTCCCAAATGGCGAAAGGTTTCTCTTACAGATTCAAAGTTTATTGCTGGTAATGAATCTGATAGTTCCTCTTTAAGCTACTCAAAATTGGCTAATCATGAGAAGAAAGTTCAAGTTGGAATGGAAAGCAATAACAAAAGCAACGTGAGCCCAGAATCGGTGCTAAGAAACTTAGCAATGACCTATGAGAACATTCCTTCTATTATAAGGAAAAGATCTCCTAGGAAGTCATGCAGTGCTGACAAATATGGCAAGTCCCAAACACCTTCTAAAATGGCTATCACAACTCCTAAAGCAGGATGTGTAATTGGTTTCGATAATTTAAAACTCAACCAAGGATTTGTTCCATTCCTTCCTAGAAATTCCATGGAATGA
Protein sequence

>MS.gene072807.t1

MLEMEKELKDLQFGSPNHRDLLHLCLSSPNCNSDTCFLESSPATGKIKSQISSKKGIWTEEEDNLLIEIVKRHDGSIWKSIGGCAAYFPGRTDIECFHRWQKVSNHDLVKRSWTKEEDEALIELVRKYGFKRWSFIAKSMPCRIGKQCRERWHNNLDPAIKKGAWTEEEESILAHYYQIYGSKWSEIARVLPGRSDNAIKNHWNSSLKKKSSASPTRCDMDVSTSSFCSSLIKPAHGSVKAEDQSLVGIVSPKQSNWLNHNADSFPTRVFIRNASVEEFRSDKNIFGVATPRASEKSERRLVNLPNEMETVTCFKNHANPTFADKYMNSSLDMLATNMDCFLSSSTVTYEAYNFPKWRKVSLTDSKFIAGNESDSSSLSYSKLANHEKKVQVGMESNNKSNVSPESVLRNLAMTYENIPSIIRKRSPRKSCSADKYGKSQTPSKMAITTPKAGCVIGFDNLKLNQGFVPFLPRNSME