AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072831

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072831.t1 MTR_5g011000 97.433 1519 32 1 1 1512 1 1519 0.0 3065
MS.gene072831.t1 MTR_8g038990 27.841 528 327 14 797 1301 769 1265 1.24e-42 172
MS.gene072831.t1 MTR_8g038990 26.237 667 396 21 6 632 43 653 2.24e-38 158
MS.gene072831.t1 MTR_5g023020 26.838 585 346 21 316 866 350 886 3.84e-39 160
MS.gene072831.t1 MTR_4g061700 25.811 647 365 23 318 906 354 943 6.29e-36 149
MS.gene072831.t1 MTR_4g061800 26.466 597 342 20 318 866 355 902 3.13e-35 147
MS.gene072831.t1 MTR_4g086290 24.164 658 349 20 316 866 409 1023 9.53e-27 120
MS.gene072831.t1 MTR_4g086290 24.387 652 355 19 316 866 409 1023 2.16e-26 118
MS.gene072831.t1 MTR_8g066100 28.959 221 131 6 273 487 23 223 2.17e-16 80.9
MS.gene072831.t1 MTR_3g101770 45.122 82 42 1 1364 1442 120 201 8.86e-14 72.8
MS.gene072831.t1 MTR_3g102270 41.379 87 48 2 1355 1438 91 177 2.25e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072831.t1 AT1G63020 50.603 1492 668 22 4 1469 2 1450 0.0 1401
MS.gene072831.t1 AT1G63020 50.603 1492 668 22 4 1469 2 1450 0.0 1401
MS.gene072831.t1 AT1G63020 50.067 1492 662 23 4 1469 2 1436 0.0 1374
MS.gene072831.t1 AT1G63020 52.908 1238 527 19 4 1221 2 1203 0.0 1232
MS.gene072831.t1 AT1G63020 52.951 1169 512 13 312 1469 1 1142 0.0 1167
MS.gene072831.t1 AT2G40030 28.128 1031 611 35 312 1302 311 1251 1.28e-86 314
MS.gene072831.t1 AT2G40030 39.080 87 50 2 1355 1438 1741 1827 5.58e-11 68.6
MS.gene072831.t1 AT2G40030 28.128 1031 611 35 312 1302 311 1251 1.70e-86 313
MS.gene072831.t1 AT5G60040 24.266 919 521 32 42 866 66 903 4.46e-42 169
MS.gene072831.t1 AT4G35800 27.179 585 344 20 316 866 351 887 5.34e-42 170
MS.gene072831.t1 AT4G35800 27.179 585 344 20 316 866 351 887 5.34e-42 170
MS.gene072831.t1 AT5G60040 23.906 937 519 33 42 866 66 920 4.88e-39 160
MS.gene072831.t1 AT3G57660 26.990 289 156 7 316 553 428 712 2.24e-16 86.3
MS.gene072831.t1 AT3G57660 26.990 289 156 7 316 553 441 725 2.40e-16 85.9
MS.gene072831.t1 AT1G45230 48.148 81 39 2 1365 1442 116 196 7.03e-13 70.1
MS.gene072831.t1 AT3G46630 34.906 106 64 3 1336 1438 79 182 1.66e-11 65.9
MS.gene072831.t1 AT1G45230 46.341 82 41 2 1364 1442 115 196 2.54e-11 65.5

Find 299 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTCCTTGCTATGTTTA+AGG 0.068251 5.3:+4607141 MS.gene072831:CDS
TTTAAATAAGAAAAGAAATT+TGG 0.108907 5.3:+4604432 MS.gene072831:CDS
TTCCACTGCTTAGGCTCTTT+TGG 0.149039 5.3:-4612657 None:intergenic
GAAGTCCCTCATCGACTTTC+AGG 0.160626 5.3:+4605482 MS.gene072831:CDS
GACCTTGAGCTTAGTGAAAT+TGG 0.184871 5.3:+4605966 MS.gene072831:CDS
TCGATTATTTCAGGTCATTT+TGG 0.188941 5.3:+4603588 MS.gene072831:intron
GCAAGAAATTGGTTGATTTC+AGG 0.189595 5.3:+4605644 MS.gene072831:CDS
GGACTTCCAAATTCTTCTTA+TGG 0.194957 5.3:+4603441 MS.gene072831:CDS
GAGGATTACCTGCCGATTAT+TGG 0.215609 5.3:+4604458 MS.gene072831:CDS
ATATCTTGTTCCGAGGCTTC+TGG 0.216542 5.3:+4606686 MS.gene072831:CDS
ACTAGAAGTTAAGAATTATT+TGG 0.227005 5.3:+4607831 MS.gene072831:CDS
TTTCCTTGTCTAAATGAAAA+TGG 0.230009 5.3:-4607945 None:intergenic
TTGGACAGGCAACTGATTAA+TGG 0.248893 5.3:+4606395 MS.gene072831:CDS
GGTTGGTCTCAGTTGCTTCT+TGG 0.249095 5.3:+4605433 MS.gene072831:CDS
TCATACCGCAAATGCATTCT+TGG 0.268520 5.3:+4614525 MS.gene072831:CDS
GTGCACCCATAAGAAGAATT+TGG 0.272747 5.3:-4603447 None:intergenic
GACCAGGGCTTGCAAGAAAT+TGG 0.277678 5.3:+4605633 MS.gene072831:CDS
TTAAATAAGAAAAGAAATTT+GGG 0.287779 5.3:+4604433 MS.gene072831:CDS
TCAAATTGCAGAAGCTTTGC+AGG 0.290475 5.3:+4605998 MS.gene072831:CDS
AAATCTTATAATGGTTCTTC+TGG 0.291454 5.3:+4610839 MS.gene072831:CDS
GACTTCCAAATTCTTCTTAT+GGG 0.295172 5.3:+4603442 MS.gene072831:CDS
ACAGCAATATTTGCAACCTT+TGG 0.303749 5.3:-4604191 None:intergenic
GCAATCTCTGCCATGAAGTA+TGG 0.304427 5.3:-4603642 None:intergenic
TATGGATGTAAAATGGTAAA+AGG 0.307882 5.3:-4603624 None:intergenic
CGATGATTGCTCTCACAGTT+AGG 0.309258 5.3:+4606234 MS.gene072831:CDS
GGGACAAAGTGTTGATAAAT+AGG 0.313397 5.3:+4606189 MS.gene072831:CDS
AGTATGTCAATCGGCAAAAT+AGG 0.314657 5.3:+4606027 MS.gene072831:CDS
CTTCTGCAAACAGCTATAAA+AGG 0.318730 5.3:+4610267 MS.gene072831:CDS
TTCCCGACCATCTATTCCTT+TGG 0.324024 5.3:-4614584 None:intergenic
CCTTGGACTGCAACATTCTC+TGG 0.325028 5.3:+4607210 MS.gene072831:CDS
TTATAAGATTTCGTTACTTT+TGG 0.331519 5.3:-4610827 None:intergenic
TTAAATACTTATAGGATAAT+AGG 0.331600 5.3:+4605611 MS.gene072831:intron
TTTCATCCAATGATTTCTTC+AGG 0.331811 5.3:+4604374 MS.gene072831:CDS
GTTTATTCCAAGCATGGATT+TGG 0.335605 5.3:+4605412 MS.gene072831:CDS
CACCATTTCTGCTCAGCCTT+TGG 0.336965 5.3:+4610989 MS.gene072831:CDS
GCTTAATGAGCTGGTTGCTT+TGG 0.339186 5.3:+4606376 MS.gene072831:CDS
GGATGAAACTCTGAATTTCA+TGG 0.343280 5.3:-4604359 None:intergenic
ATTGTTTGCCACTCCAAAAC+GGG 0.344019 5.3:-4606586 None:intergenic
CAGATAAATGTTCGCAGAAA+TGG 0.344254 5.3:+4606095 MS.gene072831:CDS
AGGATTACCTGCCGATTATT+GGG 0.345739 5.3:+4604459 MS.gene072831:CDS
GCAATGACAATGGTACATTC+TGG 0.347220 5.3:+4610894 MS.gene072831:CDS
TGAGTTAAGTTCTCGTGTTT+TGG 0.354801 5.3:+4605678 MS.gene072831:CDS
AAAATTGGTAAACAAAGAAA+TGG 0.355562 5.3:+4607793 MS.gene072831:CDS
CATAAAAGCGATAAAGTTTG+AGG 0.357208 5.3:+4603008 MS.gene072831:CDS
CTCTAAGAATTCTGTACAAC+TGG 0.357999 5.3:+4610215 MS.gene072831:CDS
TTGTGATTTCAACCAGTTAT+TGG 0.359411 5.3:+4606931 MS.gene072831:CDS
TCATCTGCAACTTCTGATAC+TGG 0.362171 5.3:+4611146 MS.gene072831:CDS
TTGGTCCATCTGGTTAAAAC+TGG 0.364486 5.3:-4612553 None:intergenic
GATGCTTCAAGTAGACTAAT+AGG 0.367103 5.3:-4607685 None:intergenic
ACAAGTCACTTGTTCTGATC+TGG 0.368529 5.3:+4603419 MS.gene072831:CDS
TGGACAGGCAACTGATTAAT+GGG 0.370621 5.3:+4606396 MS.gene072831:CDS
TATCTTGTTCCGAGGCTTCT+GGG 0.372030 5.3:+4606687 MS.gene072831:CDS
TGGATGAAAGACGTCGTTCT+TGG 0.373338 5.3:+4605897 MS.gene072831:CDS
TTCAGCTAGTGGAGAGTTTG+TGG 0.382492 5.3:+4611214 MS.gene072831:CDS
CAATCTAGATGCATTGGCTT+GGG 0.387250 5.3:+4611498 MS.gene072831:CDS
CATGAAGTATGGATGTAAAA+TGG 0.387461 5.3:-4603631 None:intergenic
TCAAGAAGGTTGACATTCTC+TGG 0.390421 5.3:+4610795 MS.gene072831:CDS
CAGAAATGGTGAATATTATC+AGG 0.392369 5.3:-4610977 None:intergenic
TTGGGGAAACTGTCTGCCCA+TGG 0.393744 5.3:+4611516 MS.gene072831:CDS
AACTGTCTGCCCATGGGGAC+AGG 0.394184 5.3:+4611523 MS.gene072831:CDS
CAGCAATATTTGCAACCTTT+GGG 0.396290 5.3:-4604190 None:intergenic
CAAGAAATTGGTTGATTTCA+GGG 0.399414 5.3:+4605645 MS.gene072831:CDS
CCCCGTGAACTTTCATGTGC+TGG 0.401216 5.3:+4607253 MS.gene072831:CDS
TATTAATCTCTTGGTCCATC+TGG 0.402596 5.3:-4612563 None:intergenic
TTTGATGGTGACTGCCTTCA+CGG 0.405921 5.3:+4606320 MS.gene072831:CDS
GTCAAGTCAAATACAGTCCT+TGG 0.406221 5.3:+4607917 MS.gene072831:CDS
TTCCAAAGGCTGAGCAGAAA+TGG 0.408120 5.3:-4610991 None:intergenic
GAAAATGTTCCACAAGACTT+TGG 0.410243 5.3:-4606739 None:intergenic
CTCTGGACCACAAGACATAA+AGG 0.411401 5.3:+4613214 MS.gene072831:CDS
AGTAATGATCTACCAATAAC+TGG 0.412687 5.3:-4606943 None:intergenic
TGGGGAAACTGTCTGCCCAT+GGG 0.413350 5.3:+4611517 MS.gene072831:CDS
GAATAATGCCGTTGATTGAC+TGG 0.413930 5.3:+4610942 MS.gene072831:CDS
AGTGACAACGCAGACCTTCC+TGG 0.414558 5.3:+4607439 MS.gene072831:CDS
CTTCAAGTAATACCCCGTTT+TGG 0.414732 5.3:+4606573 MS.gene072831:CDS
ATGGTCGGGAAATGGTGATA+TGG 0.416767 5.3:+4614596 MS.gene072831:CDS
ATCAAAATAGGGAAATGGTA+TGG 0.420088 5.3:+4604324 MS.gene072831:intron
ATAGATACTACAGAAGATAT+TGG 0.420170 5.3:-4606263 None:intergenic
CAATCTCGCAAATATTCATC+TGG 0.420397 5.3:+4612591 MS.gene072831:CDS
GGAACAGTGAGAAACTTATA+TGG 0.423338 5.3:+4607517 MS.gene072831:CDS
GATTATTGGGACTTTATCCT+TGG 0.424725 5.3:+4604472 MS.gene072831:CDS
AAAGTAACGAAATCTTATAA+TGG 0.425151 5.3:+4610830 MS.gene072831:CDS
TCGACAAGAATTACGTGTTA+AGG 0.425487 5.3:+4603704 MS.gene072831:CDS
CCTCGTAGAGATGAGAAGTT+TGG 0.426581 5.3:+4613191 MS.gene072831:CDS
TGTAAAAGTATTACCTGAAC+GGG 0.427703 5.3:-4604541 None:intergenic
TCTGTCACACGATGACAATT+CGG 0.431347 5.3:-4605461 None:intergenic
ATTGAAGGGTATTAATCTCT+TGG 0.432033 5.3:-4612572 None:intergenic
CGCAGAGGTGAACAGCAGAT+TGG 0.432250 5.3:-4606290 None:intergenic
TCAGCCTTTGGAATCGATGC+AGG 0.432958 5.3:+4611001 MS.gene072831:CDS
TCAGCTAGTGGAGAGTTTGT+GGG 0.433030 5.3:+4611215 MS.gene072831:CDS
GTGCAGCAGTTAAACTATCC+TGG 0.433101 5.3:-4606448 None:intergenic
AAGGATAAAGTCCCAATAAT+CGG 0.435976 5.3:-4604470 None:intergenic
GAAAATGCTTGCAATTCGTC+TGG 0.436937 5.3:+4605867 MS.gene072831:CDS
TTCTGAAGGAGTCATATTGC+TGG 0.436964 5.3:-4608017 None:intergenic
AAGGCATAGTCAAATTTAGA+AGG 0.437146 5.3:-4606626 None:intergenic
CAAAGCTTCTGCAATTTGAC+AGG 0.437923 5.3:-4605994 None:intergenic
ATATTAACTGGCGTTCTGTC+AGG 0.443311 5.3:-4605813 None:intergenic
TTCCTTGCTATGTTTAAGGC+TGG 0.445099 5.3:+4607145 MS.gene072831:CDS
TGTGAGTGGTTGTCTATGAC+AGG 0.446262 5.3:+4606806 MS.gene072831:CDS
CAGGCAGAAAGCGCTCCGAC+TGG 0.448913 5.3:-4607625 None:intergenic
TATGCATCAAAATAGGGAAA+TGG 0.449961 5.3:+4604319 MS.gene072831:intron
TTTATCGGCCTCTTGTTGAT+GGG 0.453246 5.3:+4606168 MS.gene072831:CDS
ATGAATATTTGCGAGATTGA+AGG 0.455447 5.3:-4612587 None:intergenic
CAATGACAATGGTACATTCT+GGG 0.455481 5.3:+4610895 MS.gene072831:CDS
ATGAGCTGGTTGCTTTGGAC+AGG 0.456391 5.3:+4606381 MS.gene072831:CDS
GCAATTCGTCTGGTTTAAGA+TGG 0.462733 5.3:+4605877 MS.gene072831:CDS
AACTTGCCTTGGAAAATCTC+AGG 0.463750 5.3:-4605705 None:intergenic
AATTGTTTGCCACTCCAAAA+CGG 0.464029 5.3:-4606587 None:intergenic
GCACTTTGTGCACTGTAGCC+AGG 0.465310 5.3:-4602975 None:intergenic
GCATTTCAAGCTGCTGCACT+TGG 0.465552 5.3:-4606508 None:intergenic
AAATTTGCTTTCACTTTCCC+AGG 0.466210 5.3:+4606430 MS.gene072831:CDS
ATCCAAAGGAATAGATGGTC+GGG 0.470130 5.3:+4614582 MS.gene072831:CDS
TTTGTGGGATTAAATGCTAA+AGG 0.473356 5.3:+4611230 MS.gene072831:CDS
TGAGCAATGTAAGACTGGTT+TGG 0.473908 5.3:-4607331 None:intergenic
GCAACAAGACGCAGATGCTT+AGG 0.474004 5.3:-4611182 None:intergenic
AACCAATTTCTTGCAAGCCC+TGG 0.474313 5.3:-4605635 None:intergenic
AGTTCTCCTGAAGAAATCAT+TGG 0.475110 5.3:-4604380 None:intergenic
AAATTGGTAAACAAAGAAAT+GGG 0.475636 5.3:+4607794 MS.gene072831:CDS
CAAAGATCCAAAGGAATAGA+TGG 0.475920 5.3:+4614577 MS.gene072831:CDS
TGTCGAATAGATTTACATGC+AGG 0.477791 5.3:-4603687 None:intergenic
AAGGAAGCTAAGAAATGGTC+AGG 0.478002 5.3:+4614681 MS.gene072831:CDS
GCAGAGGTGAACAGCAGATT+GGG 0.478220 5.3:-4606289 None:intergenic
ACTTCCACATCATTATTTCC+CGG 0.478350 5.3:-4614732 None:intergenic
TGGAGTTGTGGATAATCTCC+AGG 0.480292 5.3:+4611474 MS.gene072831:CDS
CAAGTCACTTGTTCTGATCT+GGG 0.481047 5.3:+4603420 MS.gene072831:CDS
TGCTGGTTGGAACAGTCAAA+AGG 0.483843 5.3:+4607270 MS.gene072831:CDS
TGAAAAGTTTATTCCAAGCA+TGG 0.484092 5.3:+4605406 MS.gene072831:CDS
ATGTTCATCCACACCTTCAC+AGG 0.485697 5.3:-4603496 None:intergenic
AGGAATAGATGGTCGGGAAA+TGG 0.488750 5.3:+4614588 MS.gene072831:CDS
TGGCTTACGAGTAGCAGAAC+AGG 0.491124 5.3:+4606907 MS.gene072831:CDS
TGAGCTGTGTTTGTTAGAGA+AGG 0.491841 5.3:+4606070 MS.gene072831:CDS
AATCATCGAGTGTTGGTGTA+TGG 0.492737 5.3:-4606219 None:intergenic
GTGCAACATTCCATGTGCCT+TGG 0.493283 5.3:+4607193 MS.gene072831:CDS
TCTGCTGTTCACCTCTGCGT+GGG 0.494173 5.3:+4606294 MS.gene072831:CDS
GCAATCTAGATGCATTGGCT+TGG 0.495208 5.3:+4611497 MS.gene072831:CDS
AGAAAATCATGTAAATAGAA+AGG 0.495810 5.3:+4604510 MS.gene072831:CDS
ATGACAAGGAAGCTAAGAAA+TGG 0.497395 5.3:+4614676 MS.gene072831:CDS
GGACAAGTTAACAATAATGA+AGG 0.497681 5.3:+4613154 MS.gene072831:CDS
CAAAACGGGGTATTACTTGA+AGG 0.500907 5.3:-4606572 None:intergenic
TGGGCTGATTATTGTATCCA+AGG 0.501083 5.3:-4604171 None:intergenic
TGACTTGACTGCAATGCTGT+GGG 0.501511 5.3:-4607903 None:intergenic
CGCTGGACATAGTAACCCTC+AGG 0.501989 5.3:-4610871 None:intergenic
AAGTCCCTCATCGACTTTCA+GGG 0.501992 5.3:+4605483 MS.gene072831:CDS
GATGATTGCTCTCACAGTTA+GGG 0.502840 5.3:+4606235 MS.gene072831:CDS
GAGCACCAAGAATGCATTTG+CGG 0.503799 5.3:-4614530 None:intergenic
ATCACAAGATGAATCCTCTT+CGG 0.503984 5.3:-4607569 None:intergenic
AACTGCTGCACATTTGCTGT+TGG 0.505905 5.3:+4606460 MS.gene072831:CDS
TGGTCTCAGTTGCTTCTTGG+TGG 0.507317 5.3:+4605436 MS.gene072831:CDS
GTGACAACGCAGACCTTCCT+GGG 0.507371 5.3:+4607440 MS.gene072831:CDS
AATACACTTACGAAACTCAA+TGG 0.507710 5.3:-4605512 None:intergenic
ATTCCAAGCATGGATTTGGT+TGG 0.508111 5.3:+4605416 MS.gene072831:CDS
TCCAGGTGCATTTATCTCCA+AGG 0.508480 5.3:-4603397 None:intergenic
TCAAGTCAAATACAGTCCTT+GGG 0.508664 5.3:+4607918 MS.gene072831:CDS
AGAGATGAGAAGTTTGGCTC+TGG 0.509525 5.3:+4613197 MS.gene072831:CDS
GCACATTTGCTGTTGGAAGA+TGG 0.510207 5.3:+4606467 MS.gene072831:CDS
CCAGGGCAATCTAGATGCAT+TGG 0.513278 5.3:+4611492 MS.gene072831:CDS
TTGACTTGACTGCAATGCTG+TGG 0.514852 5.3:-4607904 None:intergenic
AAGAAAAGAAATTTGGGGCG+AGG 0.514854 5.3:+4604439 MS.gene072831:CDS
GCAGGAGAAGATCTCAGCCT+TGG 0.515473 5.3:+4603380 MS.gene072831:intron
GCTGGTTGGAACAGTCAAAA+GGG 0.516736 5.3:+4607271 MS.gene072831:CDS
ACTCTTGCACCAACAGATTG+TGG 0.517257 5.3:-4606350 None:intergenic
CAACGGCTGTCTGTAAACTT+AGG 0.518783 5.3:-4614462 None:intergenic
TCAGAACAAGTGACTTGTCC+AGG 0.520715 5.3:-4603414 None:intergenic
GCCAACAGTCTTTCAGCTAG+TGG 0.522257 5.3:+4611203 MS.gene072831:CDS
GAAAAGCATGCTTGCACGAA+GGG 0.523798 5.3:-4611290 None:intergenic
ATTTCACTAAGCTCAAGGTC+TGG 0.524366 5.3:-4605963 None:intergenic
GATAAGTCTGTAGATGTGTA+TGG 0.524627 5.3:+4612519 MS.gene072831:CDS
ATGTCTACTCACAGGTTGGA+TGG 0.524848 5.3:+4614436 MS.gene072831:intron
TGCAGCAGTTAAACTATCCT+GGG 0.526315 5.3:-4606447 None:intergenic
AGTCTACGGGTCAATGTCCC+AGG 0.527003 5.3:-4607457 None:intergenic
ATGTTCTAGAGTGTGGTTCA+AGG 0.527139 5.3:+4607728 MS.gene072831:CDS
AGCTGCGAAGTCTGGAGTTG+TGG 0.529515 5.3:+4611462 MS.gene072831:CDS
ACCAGCACATGAAAGTTCAC+GGG 0.530210 5.3:-4607254 None:intergenic
TGTACCATTGTCATTGCCGC+TGG 0.530768 5.3:-4610888 None:intergenic
TTCTGCCTGTGCGGTTTCTG+AGG 0.530871 5.3:+4607639 MS.gene072831:CDS
GGTTAAAACTGGTTTCTAGC+AGG 0.531854 5.3:-4612542 None:intergenic
AGCTGATAAGCATGCGTGCA+AGG 0.532192 5.3:+4607114 MS.gene072831:CDS
ATGATGGAGGAAATCTCCTA+TGG 0.533841 5.3:+4606887 MS.gene072831:CDS
AACTGTCCACCTGTCCCCAT+GGG 0.534121 5.3:-4611532 None:intergenic
TGAATATTTGCGAGATTGAA+GGG 0.536189 5.3:-4612586 None:intergenic
AAACTGTCCACCTGTCCCCA+TGG 0.537607 5.3:-4611533 None:intergenic
CAGCATGAGCAATGTAAGAC+TGG 0.539126 5.3:-4607336 None:intergenic
AACCAGCACATGAAAGTTCA+CGG 0.541175 5.3:-4607255 None:intergenic
CAGCGTGCTAAATCACTCCT+TGG 0.543747 5.3:+4604154 MS.gene072831:intron
TCTTATGGGTGCACAACATG+TGG 0.545300 5.3:+4603456 MS.gene072831:CDS
GCATGAAGAACATAAGTCTA+CGG 0.545627 5.3:-4607471 None:intergenic
TATGTTTAAGGCTGGAAGCA+AGG 0.546067 5.3:+4607153 MS.gene072831:CDS
ACGTTCCGTACTGTGGTTGT+TGG 0.546782 5.3:+4605936 MS.gene072831:CDS
ATAGCTGTTTGCAGAAGGAA+AGG 0.548165 5.3:-4610261 None:intergenic
AGCCAGGTCTTCATCATCCA+TGG 0.548286 5.3:-4602959 None:intergenic
CTGATTAATGGGCAAAGTGG+TGG 0.548486 5.3:+4606407 MS.gene072831:CDS
CCAGAGAATGTTGCAGTCCA+AGG 0.548500 5.3:-4607210 None:intergenic
GAGTTGCAACAAAGAAAAGT+TGG 0.549595 5.3:+4605843 MS.gene072831:CDS
ACAATCTGTTGGTGCAAGAG+TGG 0.549785 5.3:+4606352 MS.gene072831:CDS
TTGATGGTGACTGCCTTCAC+GGG 0.551285 5.3:+4606321 MS.gene072831:CDS
TCAAAATAGGGAAATGGTAT+GGG 0.552158 5.3:+4604325 MS.gene072831:intron
TTATCGGCCTCTTGTTGATG+GGG 0.553311 5.3:+4606169 MS.gene072831:CDS
ATAAAGTCCCAATAATCGGC+AGG 0.555863 5.3:-4604466 None:intergenic
GTCTTACATTGCTCATGCTG+TGG 0.557888 5.3:+4607339 MS.gene072831:CDS
GGAATCATATCGCAGAATCC+TGG 0.558934 5.3:+4611424 MS.gene072831:intron
AGACCAACCAAATCCATGCT+TGG 0.560056 5.3:-4605419 None:intergenic
ATGTTTAAGGCTGGAAGCAA+GGG 0.561534 5.3:+4607154 MS.gene072831:CDS
GAATGAACAAAACATTCAAG+TGG 0.562268 5.3:-4607391 None:intergenic
ACACATACCTTTATGTCTTG+TGG 0.563349 5.3:-4613221 None:intergenic
CTTCTTGTTGAACATCTCCA+AGG 0.564498 5.3:-4604489 None:intergenic
TCAAAAGGGGCTTCATTCAG+TGG 0.565101 5.3:+4607285 MS.gene072831:CDS
GATATGTATGATGCATATGA+TGG 0.565366 5.3:+4607496 MS.gene072831:CDS
TACCAATTTCACTAAGCTCA+AGG 0.566332 5.3:-4605968 None:intergenic
TTCCAGCCTTAAACATAGCA+AGG 0.567520 5.3:-4607147 None:intergenic
ACGTAACCACCCAGAAGCCT+CGG 0.569914 5.3:-4606696 None:intergenic
TGCTGCTCTAAGTCAAGCGT+CGG 0.572451 5.3:+4607051 MS.gene072831:CDS
ATGTAAAAGTATTACCTGAA+CGG 0.573895 5.3:-4604542 None:intergenic
GATCCAAAGGAATAGATGGT+CGG 0.576137 5.3:+4614581 MS.gene072831:CDS
AGGTTTCTGAGTATGTCAAT+CGG 0.576936 5.3:+4606018 MS.gene072831:CDS
GTAGATTACAAGGCTAATGA+AGG 0.577115 5.3:+4610126 MS.gene072831:CDS
TTCCATGGATGATGAAGACC+TGG 0.577323 5.3:+4602957 None:intergenic
GTCGAATAGATTTACATGCA+GGG 0.578084 5.3:-4603686 None:intergenic
GAAACTCTGAATTTCATGGC+AGG 0.578125 5.3:-4604355 None:intergenic
TGTCTGCCCATGGGGACAGG+TGG 0.578269 5.3:+4611526 MS.gene072831:CDS
AAGAAATTGGTTGATTTCAG+GGG 0.579708 5.3:+4605646 MS.gene072831:CDS
ATCGAGTGTTGGTGTATGGA+AGG 0.580065 5.3:-4606215 None:intergenic
GGGGAAACTGTCTGCCCATG+GGG 0.581263 5.3:+4611518 MS.gene072831:CDS
TCCACTAGCTGAAAGACTGT+TGG 0.585210 5.3:-4611204 None:intergenic
GCCTTGGAGATAAATGCACC+TGG 0.587059 5.3:+4603396 MS.gene072831:CDS
AGAAAGGTACAGATCTGAGA+GGG 0.587444 5.3:-4606840 None:intergenic
CAGGTTGAGAATTTATTGAG+TGG 0.590029 5.3:+4605365 MS.gene072831:intron
AAGACTTTGGACGTATTGCA+TGG 0.591011 5.3:+4606767 MS.gene072831:CDS
AAGAAAGGTACAGATCTGAG+AGG 0.591758 5.3:-4606841 None:intergenic
TTTCGAGAGGATATTATAGG+TGG 0.591930 5.3:+4607598 MS.gene072831:CDS
ATGTTGCAGTCCAAGGCACA+TGG 0.594030 5.3:-4607203 None:intergenic
ATCTGCTGTTCACCTCTGCG+TGG 0.594457 5.3:+4606293 MS.gene072831:CDS
TGTCACTGAAAGAGCTATCA+CGG 0.595023 5.3:-4607423 None:intergenic
AATCTAGATGCATTGGCTTG+GGG 0.595974 5.3:+4611499 MS.gene072831:CDS
CGACAGTACGTTCCGTACTG+TGG 0.596264 5.3:+4605929 MS.gene072831:CDS
AAAGATAGAAAGTCCTGTGA+AGG 0.597271 5.3:+4603483 MS.gene072831:CDS
GAAGGTTGACATTCTCTGGA+AGG 0.597340 5.3:+4610799 MS.gene072831:CDS
GAGCTGTGTTTGTTAGAGAA+GGG 0.598460 5.3:+4606071 MS.gene072831:CDS
CATGAAGAACATAAGTCTAC+GGG 0.599915 5.3:-4607470 None:intergenic
ACTTATAGGATAATAGGACC+AGG 0.600610 5.3:+4605617 MS.gene072831:intron
CTTCTGGTGAACTATACCTG+AGG 0.600978 5.3:+4610855 MS.gene072831:CDS
CAGCCTTTGGAATCGATGCA+GGG 0.601191 5.3:+4611002 MS.gene072831:CDS
GAAATGGTGTGTAGATTACA+AGG 0.602564 5.3:+4610116 MS.gene072831:CDS
CCACCCTGCATCGATTCCAA+AGG 0.603437 5.3:-4611005 None:intergenic
TTGCACGAAGGGTGATGAAA+CGG 0.604147 5.3:-4611279 None:intergenic
CTTCGTGTCCAGTCAATCAA+CGG 0.604908 5.3:-4610950 None:intergenic
ACAATGGTACATTCTGGGGT+AGG 0.605563 5.3:+4610900 MS.gene072831:CDS
CACAGAAAGCTCTTTGTGAG+TGG 0.606040 5.3:+4606792 MS.gene072831:CDS
CGGAGCGCTTTCTGCCTGTG+CGG 0.606596 5.3:+4607630 MS.gene072831:CDS
GATTACAAGGCTAATGAAGG+TGG 0.608968 5.3:+4610129 MS.gene072831:CDS
AAGAGTGGAGCTTAATGAGC+TGG 0.610194 5.3:+4606367 MS.gene072831:CDS
GCGCATAGGAATCAGAAGAA+AGG 0.612948 5.3:-4606856 None:intergenic
AGAAAAGCATGCTTGCACGA+AGG 0.614031 5.3:-4611291 None:intergenic
AATGACAATGGTACATTCTG+GGG 0.614211 5.3:+4610896 MS.gene072831:CDS
TTCTGCTACTCGTAAGCCAT+AGG 0.614340 5.3:-4606903 None:intergenic
CTGCTGTTCACCTCTGCGTG+GGG 0.615902 5.3:+4606295 MS.gene072831:CDS
AAATGAAAATGGCAAACCCA+AGG 0.616087 5.3:-4607934 None:intergenic
TGCAGCCTCAGAAACCGCAC+AGG 0.617889 5.3:-4607644 None:intergenic
TAAATAAGAAAAGAAATTTG+GGG 0.618902 5.3:+4604434 MS.gene072831:CDS
TTCTGGTGAACTATACCTGA+GGG 0.621953 5.3:+4610856 MS.gene072831:CDS
TGACTGCAAATGATATTCAG+AGG 0.622105 5.3:+4612700 MS.gene072831:CDS
TTGCTGTTGGAAGATGGTGT+AGG 0.623248 5.3:+4606473 MS.gene072831:CDS
GTGAACTTTCATGTGCTGGT+TGG 0.624208 5.3:+4607257 MS.gene072831:CDS
CCAATGCATCTAGATTGCCC+TGG 0.625626 5.3:-4611492 None:intergenic
ATGTCCAGCGGCAATGACAA+TGG 0.626224 5.3:+4610884 MS.gene072831:CDS
AGCTGTGTTTGTTAGAGAAG+GGG 0.626631 5.3:+4606072 MS.gene072831:CDS
GATCACCAACAACCACAGTA+CGG 0.628291 5.3:-4605941 None:intergenic
TGATATCATATACTCAGAGA+AGG 0.632502 5.3:+4611555 MS.gene072831:CDS
ATTGTGGAATATACCCGTGA+AGG 0.633278 5.3:-4606334 None:intergenic
ATGGTCAGGAAATGATGACA+TGG 0.634506 5.3:+4614695 MS.gene072831:CDS
CAACTGATTAATGGGCAAAG+TGG 0.635243 5.3:+4606404 MS.gene072831:CDS
AGTCCCTCATCGACTTTCAG+GGG 0.635892 5.3:+4605484 MS.gene072831:CDS
ACTTTGTCCCCATCAACAAG+AGG 0.637655 5.3:-4606176 None:intergenic
GGGTATATTCCACAATCTGT+TGG 0.639665 5.3:+4606341 MS.gene072831:CDS
TGGATCGTCTGAATCATGAA+AGG 0.640285 5.3:+4607020 MS.gene072831:CDS
TGATCAGACACTAAGTGAGA+CGG 0.642559 5.3:+4613133 MS.gene072831:CDS
AAAGCTTCTGCAATTTGACA+GGG 0.645312 5.3:-4605993 None:intergenic
TACGGGTCAATGTCCCAGGA+AGG 0.649365 5.3:-4607453 None:intergenic
GTGAGTGGTTGTCTATGACA+GGG 0.649548 5.3:+4606807 MS.gene072831:CDS
CCCCAAAAGAGCCTAAGCAG+TGG 0.650394 5.3:+4612655 MS.gene072831:CDS
GGATACAATAATCAGCCCAA+AGG 0.652493 5.3:+4604175 MS.gene072831:CDS
CTGGTTGGAACAGTCAAAAG+GGG 0.654096 5.3:+4607272 MS.gene072831:CDS
TGAGAGCAATCATCGAGTGT+TGG 0.655705 5.3:-4606226 None:intergenic
TTGTTTGCCACTCCAAAACG+GGG 0.657316 5.3:-4606585 None:intergenic
GACTTGACTGCAATGCTGTG+GGG 0.657362 5.3:-4607902 None:intergenic
TTGGCCGGGAAATAATGATG+TGG 0.663064 5.3:+4614728 MS.gene072831:CDS
GAGTGTTGGTGTATGGAAGG+AGG 0.664798 5.3:-4606212 None:intergenic
GGAGCTGATATCTTGTTCCG+AGG 0.666220 5.3:+4606679 MS.gene072831:CDS
GTCCCTCATCGACTTTCAGG+GGG 0.671305 5.3:+4605485 MS.gene072831:CDS
ATTATAGGTGGCGAGCCAGT+CGG 0.673261 5.3:+4607610 MS.gene072831:CDS
GGAGTTGTGGATAATCTCCA+GGG 0.675539 5.3:+4611475 MS.gene072831:CDS
CTTATAGGATAATAGGACCA+GGG 0.676685 5.3:+4605618 MS.gene072831:intron
CCAGCACATGAAAGTTCACG+GGG 0.676940 5.3:-4607253 None:intergenic
ATGGTCGCAAAGTTATGACA+AGG 0.678703 5.3:+4614662 MS.gene072831:CDS
CCATCAAAATCCCCACGCAG+AGG 0.684429 5.3:-4606305 None:intergenic
CTGAGGGTTACTATGTCCAG+CGG 0.685559 5.3:+4610872 MS.gene072831:CDS
CTTGTTCCGAGGCTTCTGGG+TGG 0.698988 5.3:+4606690 MS.gene072831:CDS
ATGGTCGGGAAGTTATGACA+AGG 0.704571 5.3:+4614629 MS.gene072831:CDS
CCAAACTTCTCATCTCTACG+AGG 0.721582 5.3:-4613191 None:intergenic
CCTTTGGAATCGATGCAGGG+TGG 0.723625 5.3:+4611005 MS.gene072831:CDS
TAAATGCTAAAGGAATGACG+CGG 0.814027 5.3:+4611240 MS.gene072831:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.3 gene 4602961 4614767 4602961 ID=MS.gene072831
chr5.3 mRNA 4602961 4614767 4602961 ID=MS.gene072831.t1;Parent=MS.gene072831
chr5.3 exon 4602961 4603029 4602961 ID=MS.gene072831.t1.exon1;Parent=MS.gene072831.t1
chr5.3 CDS 4602961 4603029 4602961 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4603384 4603504 4603384 ID=MS.gene072831.t1.exon2;Parent=MS.gene072831.t1
chr5.3 CDS 4603384 4603504 4603384 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4603601 4603725 4603601 ID=MS.gene072831.t1.exon3;Parent=MS.gene072831.t1
chr5.3 CDS 4603601 4603725 4603601 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4604157 4604213 4604157 ID=MS.gene072831.t1.exon4;Parent=MS.gene072831.t1
chr5.3 CDS 4604157 4604213 4604157 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4604334 4604549 4604334 ID=MS.gene072831.t1.exon5;Parent=MS.gene072831.t1
chr5.3 CDS 4604334 4604549 4604334 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4605368 4605523 4605368 ID=MS.gene072831.t1.exon6;Parent=MS.gene072831.t1
chr5.3 CDS 4605368 4605523 4605368 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4605625 4605720 4605625 ID=MS.gene072831.t1.exon7;Parent=MS.gene072831.t1
chr5.3 CDS 4605625 4605720 4605625 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4605807 4608082 4605807 ID=MS.gene072831.t1.exon8;Parent=MS.gene072831.t1
chr5.3 CDS 4605807 4608082 4605807 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4610116 4610288 4610116 ID=MS.gene072831.t1.exon9;Parent=MS.gene072831.t1
chr5.3 CDS 4610116 4610288 4610116 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4610783 4611042 4610783 ID=MS.gene072831.t1.exon10;Parent=MS.gene072831.t1
chr5.3 CDS 4610783 4611042 4610783 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4611140 4611313 4611140 ID=MS.gene072831.t1.exon11;Parent=MS.gene072831.t1
chr5.3 CDS 4611140 4611313 4611140 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4611439 4611576 4611439 ID=MS.gene072831.t1.exon12;Parent=MS.gene072831.t1
chr5.3 CDS 4611439 4611576 4611439 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4612507 4612754 4612507 ID=MS.gene072831.t1.exon13;Parent=MS.gene072831.t1
chr5.3 CDS 4612507 4612754 4612507 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4613124 4613235 4613124 ID=MS.gene072831.t1.exon14;Parent=MS.gene072831.t1
chr5.3 CDS 4613124 4613235 4613124 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
chr5.3 exon 4614450 4614767 4614450 ID=MS.gene072831.t1.exon15;Parent=MS.gene072831.t1
chr5.3 CDS 4614450 4614767 4614450 ID=cds.MS.gene072831.t1;Parent=MS.gene072831.t1
Gene Sequence

>MS.gene072831

ATGGATGATGAAGACCTGGCTACAGTGCACAAAGTGCCATCTGCTCTCATAAAAGCGATAAAGTTTGAGGTTTTAACTGGAGAAGATATAGTTAAGTGTATTCTTGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATCAACTCTGCAGTTATTGTGTGTATCAGATTACTGTTAGTTTAGCAGTGGAATTAGTTCACTTGCATGTACTTGCATGTAAGATGGAAACACAGTGGAGGGTGGGTTGAAAATACATTCTTGTTTGGGTGGATTGGTTACCTTTAACCTATAAAGGGAGACAAGCCTATTTTGCGGAATGGATTATCGATCATAAATCATTTTGATTGACATGTAACTTATTAATCTCATATTTATGTTATTTAGTTTTACGCCTGCAGGAGAAGATCTCAGCCTTGGAGATAAATGCACCTGGACAAGTCACTTGTTCTGATCTGGGACTTCCAAATTCTTCTTATGGGTGCACAACATGTGGTTCAAAAGATAGAAAGTCCTGTGAAGGTGTGGATGAACATATTATATGGAAAATTGGTTTAGAGATTTGTGGTATGATTTTTGAAATCTACTAGATGTTGATCAATTAGTCGATTATTTCAGGTCATTTTGGAGCTATCAAATTTCCTTTTACCATTTTACATCCATACTTCATGGCAGAGATTGCAGAAATCTTGCAAAAGATTTGCCCTGCATGTAAATCTATTCGACAAGAATTACGTGTTAAGGTCTGGTATCTTTTACTTCTACAACATTCGAACAGTTTATCTGGTTTTGTTATAACACAGACCTGGTTTTAGACCACGTCATTTTGCATAGAATTTCATATAATCAATTTTCCATTCTATCTTGAGATGCTTAAATTATATGGCAACTTATCAGGGTTTTATTTATCTTTCCAAAATATTTCCCAAGTTTTAAGTTATATGAGATTCTCAAGTACAATAAGACATCCACTGAAGAAGTATGCATGCTTAAGTACAATGGTACATTGGTACCTGTAGTCTTTGCTCCCAACTGTCCAAAAAAATAATCCTATAATTTTGGATTTTCTACGGATGTTTGTTTGCATGTTACTTTTATGTAGGTTGTCCGTTTGGATTTGCAATTTTTCTTGTTATCTGCTTCCTATTGTTAAGGTTCTATTTCATGCTTACAGCGTGCTAAATCACTCCTTGGATACAATAATCAGCCCAAAGGTTGCAAATATTGCTGTGTAAGTTTATTTTAGGATCTTCCTTGATTCACTCTGAAATAAATTTATTTACTTCCCCTCTTTTTTTTTTTTTTTTATATTATTTTCTGCCACTCTAAGACAGCTTATGCATCAAAATAGGGAAATGGTATGGGTCGTTATCCTGCCATGAAATTCAGAGTTTCATCCAATGATTTCTTCAGGAGAACTGCAATCATTGTTGAAGTAAATGATATATCTTTAAATAAGAAAAGAAATTTGGGGCGAGGATTACCTGCCGATTATTGGGACTTTATCCTTGGAGATGTTCAACAAGAAGAAAATCATGTAAATAGAAAGGTTTTATCACCCGTTCAGGTAATACTTTTACATTCATGTTGTACTTTTGTATCATTATCCTTTGGTACTATGAATTTGCACTATATTAAAATTCATTCTTTGCTAGAAGGGTACTGGTATGTATGCTCCTTGATAATATAATTGATAACGAATGGAGTTATGTGCTGTGTTCAGCTCAACTGCTTGTTAGCACCTCTAATGAAGACGTTGCTTCAAAAGCCTAAATTAGCGTCACATTTAATGTATACAAATTGTTTATCATATGCAAATTTGAGAAGTCCAAAAACATTCATGTGATGATTTTTATGCCTGCTACAAATGAGACAGGGATGGTACTATTATATATCTAATCTTAAAATGGTCCGAAACAAATTTATTCATTACTGATTGAAAAAGTAGGATTCCAACTTGTTAGTTAGACTTTAGTTACTTGGTCTGTTTTTATTACTTTATTGATGATTTTTACGCTTGCTACAAATGAGACAGGGATGGTACTATTATATATCTAATCTTAAAATGGTCCGAAACAAATTTATTCATTACTGATTGAAAAAGTAGGATTCCAACTTGTTAGTTAGACTTTAGTTACTTGGTCTGTATTTATTACTTTATTGTGATCCACCATACCTTGGAGAGTACCTATTGATGTTTTATGGATTGACTGGGAATGACTTGCTGAAATAAACAGTCCATTTCTTTCAATAGAAGAAAATTCCCCTTTTCAAGGTCCTGAATCTTATGATATTCTAATTTGTTGACTCATTTTACTTCTGTGGTCATTCTTTTTTTCTGGTGCTTGACTAATGTAAATTTTATATTTCCTTTTTGATATTCAGGTTGAGAATTTATTGAGTGGTGTTGATCCGAACTTCATTGAAAAGTTTATTCCAAGCATGGATTTGGTTGGTCTCAGTTGCTTCTTGGTGGCGCCGAATTGTCATCGTGTGACAGAAGTCCCTCATCGACTTTCAGGGGGATATCCATTGAGTTTCGTAAGTGTATTCTTCCTCTTTCTAGTAGTCCTTAATATTTATAAGCCGTCACTCGAGTTCCAATTTTTAATATGGTATTCTGTCCGGTTAAATACTTATAGGATAATAGGACCAGGGCTTGCAAGAAATTGGTTGATTTCAGGGGTACAGCAAATGAGTTAAGTTCTCGTGTTTTGGATTGCCTGAGATTTTCCAAGGCAAGTTTCTCTGTTGCTTCATCCTTTGTTTTTCCCACTTAGTCAAAATTACACTTTTTGCTTATGGTTTTACCTTTAAAATGCAGATAAATCCTGACAGAACGCCAGTTAATATTTTTACTGAGTTGCAACAAAGAAAAGTTGGAGAAAATGCTTGCAATTCGTCTGGTTTAAGATGGATGAAAGACGTCGTTCTTGGAAAACGCAACGACAGTACGTTCCGTACTGTGGTTGTTGGTGATCCAGACCTTGAGCTTAGTGAAATTGGTATACCCTGTCAAATTGCAGAAGCTTTGCAGGTTTCTGAGTATGTCAATCGGCAAAATAGGCAAAATTTGCTTTATTGTTGTGAGCTGTGTTTGTTAGAGAAGGGGCAGATAAATGTTCGCAGAAATGGTAATCCAGTAGTTTTGTATAAAAAACAAGATTTGCAGATAGGAGACATATTTTATCGGCCTCTTGTTGATGGGGACAAAGTGTTGATAAATAGGCCTCCTTCCATACACCAACACTCGATGATTGCTCTCACAGTTAGGGTTCTTCCAATATCTTCTGTAGTATCTATTAACCCAATCTGCTGTTCACCTCTGCGTGGGGATTTTGATGGTGACTGCCTTCACGGGTATATTCCACAATCTGTTGGTGCAAGAGTGGAGCTTAATGAGCTGGTTGCTTTGGACAGGCAACTGATTAATGGGCAAAGTGGTGGAAATTTGCTTTCACTTTCCCAGGATAGTTTAACTGCTGCACATTTGCTGTTGGAAGATGGTGTAGGTTTTAATATTTACCAAGTGCAGCAGCTTGAAATGCTCTGTGATAAAGAATTAACATCTCCTGCAATTTTTAAAGCTCCTTCAAGTAATACCCCGTTTTGGAGTGGCAAACAATTGTTCAGCATGCTTTTGCCTTCTAAATTTGACTATGCCTTTCCTTCAAATGATGTTTTTGTTAAAGACGGGGAGCTGATATCTTGTTCCGAGGCTTCTGGGTGGTTACGTGATTCAGAGAACAATGTTTTCCAAAGTCTTGTGGAACATTTTCAAGGGAAGACTTTGGACGTATTGCATGGTGCACAGAAAGCTCTTTGTGAGTGGTTGTCTATGACAGGGTTTAGTGTTTCCCTCTCAGATCTGTACCTTTCTTCTGATTCCTATGCGCGTAAAAACATGATGGAGGAAATCTCCTATGGCTTACGAGTAGCAGAACAGGCTTGTGATTTCAACCAGTTATTGGTAGATCATTACTCTGATTTTCTTTCAGCAAGTCCAGAAGAGAATGAAAATTTTGTGACTGTTGATGTGGATCGTCTGAATCATGAAAGGCAAATATCTGCTGCTCTAAGTCAAGCGTCGGTCGATGCTTTTAGACATGTTTTTCGCAATATTCAGAGTTTAGCTGATAAGCATGCGTGCAAGGACAATTCTTTCCTTGCTATGTTTAAGGCTGGAAGCAAGGGTAATTTACTGAAATTAGTGCAACATTCCATGTGCCTTGGACTGCAACATTCTCTGGTTCGCTTGTCATACAGAATTCCCCGTGAACTTTCATGTGCTGGTTGGAACAGTCAAAAGGGGCTTCATTCAGTGGAGATGTCTTCAGATACTCTTGAACCAAACCAGTCTTACATTGCTCATGCTGTGGTTGAGAGCTCTTTTCTTACTGGGTTGAATCCACTTGAATGTTTTGTTCATTCAGTGACAAACCGTGATAGCTCTTTCAGTGACAACGCAGACCTTCCTGGGACATTGACCCGTAGACTTATGTTCTTCATGCGTGATATGTATGATGCATATGATGGAACAGTGAGAAACTTATATGGCAATCAACTTATACAGTTTTCTTATGATGCCGAAGAGGATTCATCTTGTGATAGCTATTTTCGAGAGGATATTATAGGTGGCGAGCCAGTCGGAGCGCTTTCTGCCTGTGCGGTTTCTGAGGCTGCATACAGTGCTTTGAGTCAACCTATTAGTCTACTTGAAGCATCACCGTTGCTGAACTTAAAAAATGTTCTAGAGTGTGGTTCAAGGAAAAAAGGTGGTGATCAGACCGTGTCTTTATTTTTGTCTGAGAAAATTGGTAAACAAAGAAATGGGTTTGAGTATGCAGCACTAGAAGTTAAGAATTATTTGGAAAGATATATGTTCTCAAACATTGTTTCTACTGTCATGATAATATTCACCCCACAGCATTGCAGTCAAGTCAAATACAGTCCTTGGGTTTGCCATTTTCATTTAGACAAGGAAAATGTAACAAGAAGAAAATTAGAAGTGCATTCTATCATTGACTCTCTTTACCAGCAATATGACTCCTTCAGAAGAGAGTCAAAAGTCATTCTTCCCAGTTTGAAAATATCAAGCAAGTAAGTTTCTTCCATTCTGGTACTTCAAGCGTTGTCTTTTGTCACTGATTGAGATATTCACTGTTCATAATGACTTTAAAAACATTGTTGCTTTATAAATTTCTGATTCTTCCCACTGTCTCTTATCCCAGAGTTCTATATTTGCTTTGCTTTGTATTCTCAGCATTGAATGTTATTTAGATTACATCTAGGCATATTCTTCCTCTGTTTTCCTTATATTATATCATGATTCAGTAACTTGTCTTCCTTTCTACATTTCATGAAAACTTTGGGACTTTTAATTATTTTGGTACCACCCTCCCTTAAGTAAAACTGAAGTCCTCTTGCTTTGGTAAAATTTGATACAGAACTAAAAGAACCTTCTCAAATAATAGAATGGAAGAGAAAGGTTGAAAATCAGAAATTAGGGTAGACAAGTACTGGATAATCTAAAACTATGATTTAGTTTAATGCAATTACGCACTCAAAATTTCAATTACAACAAGGCCACTACAGAGGAATTTGGATATTTTAGTCTAATAATTTTCAATATCAATTGCGGGTTAACTTTTTTACATTCAGTATTGTTTTATAGACCAGATACATGTTGTATGGAATAAATCTTTTATAAGAGTGTGTTTGGCCCTATTTTTTTGAGGTTTTAAAGTTACTTTTAGGATAAAGTTAAAAATTAGAACTTAGAAGTTAAAAGTTGTTTGCTATTTGTCGTTTTTTTTCAACTTTGTTAGTATTTTTAGGTTAAAATCTGTTTGGTAATTAATTCTTAAAGAGCTTTGAGATTTTATTATAAATTATCATAAATCAAATAAAAGCCATTTTTTTTTTTTATAAAAAAACTAAATTCTAAACAGACCTGATTTTTGTCGGGGACGGCCCTGTTAATATTGTTTGATCTCTACATCTTTATTATAAAAAATGTACTGTCAAACACTGATATTATTGTCTAAATCCAAACCCAAATTTACATACAAAATAAAATAGTATAAATATGTAAGCGCCAAATTTTTTTTTTTTATAAATACATAGAATTAGGGTATGGCAGGTTTGGTGGGAACTCCTATAAAATAAATAAAAGGTTTAGTGGGAATTGTGTAATGAGATACACAATAAAGTAGAATAAAAGAAAAAATGTCCCCTGAGGAAATCGAATGGTGAAGCATTCTGCAAAGTGCCATGTAAGTTGGTTTGAAGTTGATTTCAACATCTTATTTTGAAAGTCACTTCTATTTGGTTTTCTTCATTACAAATGAGATACTTTTTATTTTTTTATTTTTTATAAAGAGCTGTATTAAAATTGTGTTTGGCCCTACTTCTCTGTAGAAGTGGAAGAGAAGTAGAAAATAAGGAGGGCCAAACATGCTCTAAGTGTCAAGGTAGTTTTGAGTTTCAATTTTGATCAAGAATAGAGGACATGGGTGATTGACTAAACTATAATTTTGTGACTCTTCATGAAAAATGATATTTTGCCGATATTCAATGAATTTTGTGAACTTTATGAAGTTATAATTCTATATGGTCATAGAAGAACATAGAAGAATAACCAAAGCTATTATTCTTATTGTAGTTGATTCTGAAGGAATCTTTGTTTATCTTTTAGCATTGAAGTTACTATTGCCACAATTGCTGAAATTGGGACCAGTCACTTCTCAACAAGAGAAATACTGTGTTCTTGCTGTATATAACAAATAAAGAATCATATATTCAGTAGTTACACGTGCACACACATCCATGACCCAGTACCTACTGAAATGTAATCCCTTGCTGATATGTTGAGGGATTGGATAACTTTTGTTTCATTGATATTTTTCAAATTTGTTGTTGTTTATGTTTCTTTATGTTTTATTTTCAAGTTAAGAAGGGAGCCCTTTTCCTTCTAACCACGTTTAATTTATATTCTCTGTCTTAATGAGTTTCTTCTTTTATCAAAATGATTATGATTTTAACAGTTTCTATTATCTTAGTTTTTCTGCTTAAATTCTCATTCCTGCTTGGAGCTTTTACCATGGCTACTAACCAAGTCAATGAAATAGCAGGAAATGGTGTGTAGATTACAAGGCTAATGAAGGTGGAGAAACCTCTGTTTGTAATGAAAAAGATGGTGAAGATTGCATCACTGTTGCAGTTGTCGAAGACTCTAAGAATTCTGTACAACTGGACTCTGTTCGCAAGAGTCTGATACCTTTCCTTCTGCAAACAGCTATAAAAGGTCTGTAGTAATATAATCAGAATATCACCTGGAGGTTAAAATGATTAAATGAGCCTTTTAGAGAATCTATTTCCAGGACATTTCTTTAACTGTTGTTCTAGTTCAAATTTTGTTTCCGCTACATAATGACGGTTGAGCTTTTCTGTATCATCATATCTATTTGATGTTTCCAACTTCAATTCAATAAACTCTTGCTTAATTGGCTATTTTGAAATCTTGGTGGAGCTAAAAATGTGTTTTTTTCCTCTTTTCTTTTTGGGTCATGGAGTTGAAGCGTAGTTGTATAAATAAGCCAGGTTCGTCCTGGTCACGGGACTAGGTCACTAAATGATCAGATTATAATATTCAGTTTTTATCACAACTCCACTACATCTTGTTTGATATATACGTGAATCTGGTTTGATACATACATGAATACTTATCGCTTGTTATTTATAGTGAAGTAAAAAATGCTAATACTTAGTACTATCATGAATTTCCTAAATGTCCTTTAGGATTTTTGGAGATCAAGAAGGTTGACATTCTCTGGAAGGATCTGCCAAAAGTAACGAAATCTTATAATGGTTCTTCTGGTGAACTATACCTGAGGGTTACTATGTCCAGCGGCAATGACAATGGTACATTCTGGGGTAGGCTGATAAATCACTGTCACAGAATAATGCCGTTGATTGACTGGACACGAAGTCATCCTGATAATATTCACCATTTCTGCTCAGCCTTTGGAATCGATGCAGGGTGGCAGCATTATTTCCATGTATGATTAAATAAATTTCCTTCCTTTGTATTATGTTCCGATCTGAACGTTATGGAGATGTGTATTTAATTTGCTAGAATATGATTTTTACATGTAGAATTTGTCATCTGCAACTTCTGATACTGGCAAGTCAATTCTTCCTAAGCATCTGCGTCTTGTTGCCAACAGTCTTTCAGCTAGTGGAGAGTTTGTGGGATTAAATGCTAAAGGAATGACGCGGCAAAGAAAACATGCATCCGTTTCATCACCCTTCGTGCAAGCATGCTTTTCTGTCAGTTTTTGCATTCATATTCCAAACAAATGCTTCATATATATATATTTTTTTTTTTATGTAATGGGATTATAATTTATGATAACCTCTAAAATTCATGCTGAAATTGTGGAATCATATCGCAGAATCCTGGTAGTTCCTTTTTAAAAGCTGCGAAGTCTGGAGTTGTGGATAATCTCCAGGGCAATCTAGATGCATTGGCTTGGGGAAACTGTCTGCCCATGGGGACAGGTGGACAGTTTGATATCATATACTCAGAGAAGGTGAAGTTATGAATTTTCTTATCTATTAAAATATTAAACTTTTAGCTTCCAATGACCTTTTGATTGATCATTCATATGTCTTCATTTTCAAAAACCCCTAGAATGTGCTGAGCAGCTGTGCGAAGGTTTTATTGTATAATTAAATTTCATTGTCCCAAAACATTAATTTTTTTCTTATTTTTGAAAAATTTAATTGAAAATTGATTTCAATGACATCAAAGTTATGATGCATAGGTACGGGTACGGTACCCGGTACATAATACGGCAAATTTTAAAAAATGACGGTACGGGTACGTTGATATAAAACATCAAAAAAGAAAAAATTTCAAGTACCATTTTTGTTGTAAAAACATGCTTAGAAAAAAATCAATTATAATAAAAAATAGTAGCGTTATTCGTATTTTGATCATGTGTTTAACACACTTCTATCATCATGTTGCTTAAGAGTTTTACTTTTTTGTGCACCCCCTCTACTATTTTCATCAAAAGCAAGAGAGAGAATTGAAATACAATAAAAAAGCAAAATAATTTTGGTTATTTTTCCACCGCCCGTACGTTTTTGCCGCAACAACTACGGCGAAACAACTAAGTAAAAATGGTATGGTTCAGTACGTAAGTTACGAGTACCGTACGCGTACCTGCTATGGGTGCATACCCGGTACCAGTACTTCTCCATGTTTGGAGTACCCATGCTTTAGAGCATACAAGTCATTTTAATTTTCTGTTGTAAATTTTTGTCAACTGTTCTAAATGAAAAGCAGCATCCTGGCACTTACCGCAGGCTTTCTTATTGTTCATTTCCCTTTCCAAATATAGCCATATATAATGAATAATATGAACTTCCAGTTAAATTTCTTATTGTACCACTTCCTTCTCCAATTTTAATTATCAATTAATTAATTTAAATTTTACCATGGTTGTTTTTAACAGGTAGAGGAGATTGATAAGTCTGTAGATGTGTATGGCCTGCTAGAAACCAGTTTTAACCAGATGGACCAAGAGATTAATACCCTTCAATCTCGCAAATATTCATCTGGAAAATGCAGTTCAGATTTTAGGTCTAAAAATGGGGGTTACACCCCAAAAGAGCCTAAGCAGTGGAAAAGTGTTTTAAGAAATTTCATGACTGCAAATGATATTCAGAGGCTTACTTTTGATGCAAGGGTCATACTGAACAAGTAAGATAACATATATCTTTTCTATGGGTTGATAAGGCTGTCTGTGCATTTGATGGCATGTAGCATTGTATCTATTTATTGATATTGACATTACAATATATAGGATGCATTTATATCATATACTGCATTTATGTAGTGATTTGTCCTATTATTTCAAATTTATAAATAACCCCCTGTAGTTTGAAAGCTTCGTAGCGGGGTTTCCTTGGTTTTTAATAGCTGCTTGTTTTCTGTTTATTGCTACTAAATTTGAGGTATATATATTTTTTTGGACATGGTTTTATTTGGTTGTCTAGGTTGGTTCCCTTAGCTTAATCTGTGATCTCTGCTTTACAGAATAATTTTCAACTTTGGATGTTGTCTTTGTAGGTATCAGATTGATCAGACACTAAGTGAGACGGACAAGTTAACAATAATGAAGGTTTTGCATTTTCATCCTCGTAGAGATGAGAAGTTTGGCTCTGGACCACAAGACATAAAGGTATGTGTGCTTGCATGAAAGTGGTTTATACATGTGCTCAATTATTATTTTTGTTTCATTTCTTCATGCTAGCGTGTTTAAGTATTGGCAATGAGTAGTAAATTGTAACGCCTGACATCAAAATTGGGAAATTTTTCTATATTTTCACTGAAGAAAATTATTATCTCTGCTTAAAGAAAATTTCCTTGGAATACATTATTCTTCCTTTCCTCTTGTGTGGCAATTAGATATGGTGCCATTATAAGCTAAACGACACTGGTACATGGGCTGATGATAGCATTTTATGCATCGAGGAATTTTTCAAGTTTTTTGTTAACATCTTAGTACATTATCATCGGATAATCTTGTTTAAAAGATTATGCTTATTTGTTCTTCATTCCAAAACTCGTATTTGTTTAACTTCAAAACTAGGTTAAAGCTGCCAAATATTATAATGAAAGCAAAATGAACATTACACAGCCATTTTATGTGAAAATAAGAATGAAGAGAAATATTCAAGTGTTGGTGACCTTAAATTGATGGGTCAGAAATTTTTCCCACACTTGTATAAAATCTGTAAACTGAAAAACTGTAGATGGCTATTAACTTTCCTACAAGGAAAACTTGCATTCCATAGAATCATTTGTGGTGTAAACCGTTTCAATGATATGGAAGCTATAGTAAAGAATATTTTTAACTTTCAAATGCAACGGGCCTCTTTATTAGGATTATGGCCCAATTGGGATTAGCTTCTAGTTTATTGGAGCTTCTAAGTTAAAATGGGTATTAGTGTATGTTTCCTATGAAAAAAATCCTTATAAACATAACGATATTTATGGAAAAGTTAAATGGGAACTTCTGAAGAAATTGAGACGCAGTTCAAAATTATTTAAAAAACTCTGGCAGTGGAAGGGAAGAACAGGCTTGTGGTCTTCTGAAAACCCCGGTAATATGCCCCTCCCCCATCCCCCCACCCAAATTGGGGGTTTATCCTTTCCAAACAAGGTGATGGATCATCCTCCCTTCCTCTTCTCACTCAAACATAGGCTTAGTATATTTTGCAAGTACTTTTTTAGCAGTCTTGTTTTTCAGTTTATCCAAATAGCTCTAGGAAAGAGGTGCTTGTTTGCATTTTGGTTGTTTTCCACCAATGTCTTTACCAGTTAAATGCTCCGTGTTATAAAGTTCCCTTCATGCTTGTGGTTGCCCATGCATTTTTTCATGTCTACTCACAGGTTGGATGGCATCCTAAGTTTACAGACAGCCGTTGCTTTTTTATAATACGAAAGGACGGGTCTGTTGAAGATTTTTCATACCGCAAATGCATTCTTGGTGCTCTTGATATTATTGATCCGAAAAAGTCAAAGATCCAAAGGAATAGATGGTCGGGAAATGGTGATATGGAAGCTAAAAAATGGTCGGGAAGTTATGACAAGGAAGCTAAAAAATGGTCGCAAAGTTATGACAAGGAAGCTAAGAAATGGTCAGGAAATGATGACATGGAAGCTAAAAATTGGCCGGGAAATAATGATGTGGAAGTGACTAGCATCTGA
Protein sequence

>MS.gene072831.t1

MDDEDLATVHKVPSALIKAIKFEEKISALEINAPGQVTCSDLGLPNSSYGCTTCGSKDRKSCEGHFGAIKFPFTILHPYFMAEIAEILQKICPACKSIRQELRVKRAKSLLGYNNQPKGCKYCCGNGMGRYPAMKFRVSSNDFFRRTAIIVEVNDISLNKKRNLGRGLPADYWDFILGDVQQEENHVNRKVLSPVQVENLLSGVDPNFIEKFIPSMDLVGLSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKINPDRTPVNIFTELQQRKVGENACNSSGLRWMKDVVLGKRNDSTFRTVVVGDPDLELSEIGIPCQIAEALQVSEYVNRQNRQNLLYCCELCLLEKGQINVRRNGNPVVLYKKQDLQIGDIFYRPLVDGDKVLINRPPSIHQHSMIALTVRVLPISSVVSINPICCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDRQLINGQSGGNLLSLSQDSLTAAHLLLEDGVGFNIYQVQQLEMLCDKELTSPAIFKAPSSNTPFWSGKQLFSMLLPSKFDYAFPSNDVFVKDGELISCSEASGWLRDSENNVFQSLVEHFQGKTLDVLHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNMMEEISYGLRVAEQACDFNQLLVDHYSDFLSASPEENENFVTVDVDRLNHERQISAALSQASVDAFRHVFRNIQSLADKHACKDNSFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLSYRIPRELSCAGWNSQKGLHSVEMSSDTLEPNQSYIAHAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDSYFREDIIGGEPVGALSACAVSEAAYSALSQPISLLEASPLLNLKNVLECGSRKKGGDQTVSLFLSEKIGKQRNGFEYAALEVKNYLERYMFSNIVSTVMIIFTPQHCSQVKYSPWVCHFHLDKENVTRRKLEVHSIIDSLYQQYDSFRRESKVILPSLKISSKKWCVDYKANEGGETSVCNEKDGEDCITVAVVEDSKNSVQLDSVRKSLIPFLLQTAIKGFLEIKKVDILWKDLPKVTKSYNGSSGELYLRVTMSSGNDNGTFWGRLINHCHRIMPLIDWTRSHPDNIHHFCSAFGIDAGWQHYFHNLSSATSDTGKSILPKHLRLVANSLSASGEFVGLNAKGMTRQRKHASVSSPFVQACFSNPGSSFLKAAKSGVVDNLQGNLDALAWGNCLPMGTGGQFDIIYSEKVEEIDKSVDVYGLLETSFNQMDQEINTLQSRKYSSGKCSSDFRSKNGGYTPKEPKQWKSVLRNFMTANDIQRLTFDARVILNKYQIDQTLSETDKLTIMKVLHFHPRRDEKFGSGPQDIKVGWHPKFTDSRCFFIIRKDGSVEDFSYRKCILGALDIIDPKKSKIQRNRWSGNGDMEAKKWSGSYDKEAKKWSQSYDKEAKKWSGNDDMEAKNWPGNNDVEVTSI