Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072840.t1 | XP_003603312.1 | 98.4 | 249 | 4 | 0 | 1 | 249 | 1 | 249 | 3.80E-114 | 421 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072840.t1 | B8B3I4 | 69.1 | 249 | 72 | 1 | 6 | 249 | 20 | 268 | 3.3e-82 | 306.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072840.t1 | G7J9W3 | 98.4 | 249 | 4 | 0 | 1 | 249 | 1 | 249 | 2.8e-114 | 421.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene072840.t1 | TF | GARP-ARR-B |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057213 | MS.gene072840 | 0.814125 | 1.81E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072840.t1 | MTR_3g106220 | 98.394 | 249 | 4 | 0 | 1 | 249 | 1 | 249 | 2.22e-179 | 508 |
MS.gene072840.t1 | MTR_1g013170 | 70.204 | 245 | 67 | 2 | 6 | 249 | 3 | 242 | 3.33e-112 | 331 |
MS.gene072840.t1 | MTR_7g117705 | 67.755 | 245 | 73 | 2 | 6 | 249 | 3 | 242 | 9.85e-107 | 316 |
MS.gene072840.t1 | MTR_2g450070 | 63.454 | 249 | 86 | 1 | 6 | 249 | 16 | 264 | 1.39e-104 | 317 |
MS.gene072840.t1 | MTR_2g450070 | 63.454 | 249 | 86 | 1 | 6 | 249 | 16 | 264 | 2.84e-104 | 317 |
MS.gene072840.t1 | MTR_1g013180 | 68.163 | 245 | 72 | 2 | 6 | 249 | 154 | 393 | 1.01e-102 | 313 |
MS.gene072840.t1 | MTR_4g121020 | 56.538 | 260 | 81 | 3 | 3 | 249 | 26 | 266 | 3.05e-92 | 285 |
MS.gene072840.t1 | MTR_4g121020 | 56.538 | 260 | 81 | 3 | 3 | 249 | 26 | 266 | 3.44e-92 | 285 |
MS.gene072840.t1 | MTR_2g034960 | 57.377 | 244 | 96 | 2 | 6 | 249 | 27 | 262 | 1.59e-91 | 281 |
MS.gene072840.t1 | MTR_1g032570 | 58.300 | 247 | 100 | 2 | 4 | 249 | 7 | 251 | 1.70e-90 | 280 |
MS.gene072840.t1 | MTR_3g086100 | 58.848 | 243 | 94 | 3 | 8 | 249 | 13 | 250 | 7.17e-88 | 271 |
MS.gene072840.t1 | MTR_4g131600 | 58.367 | 245 | 93 | 3 | 5 | 249 | 17 | 252 | 1.33e-86 | 268 |
MS.gene072840.t1 | MTR_8g079940 | 56.349 | 252 | 88 | 4 | 6 | 249 | 23 | 260 | 1.91e-85 | 264 |
MS.gene072840.t1 | MTR_4g131580 | 58.678 | 242 | 93 | 3 | 8 | 249 | 17 | 251 | 7.44e-84 | 262 |
MS.gene072840.t1 | MTR_3g102590 | 59.363 | 251 | 45 | 3 | 1 | 250 | 1 | 195 | 7.88e-84 | 249 |
MS.gene072840.t1 | MTR_4g131570 | 58.776 | 245 | 91 | 4 | 8 | 249 | 17 | 254 | 3.06e-83 | 260 |
MS.gene072840.t1 | MTR_3g102590 | 59.200 | 250 | 45 | 3 | 1 | 249 | 1 | 194 | 4.66e-83 | 248 |
MS.gene072840.t1 | MTR_3g102600 | 83.459 | 133 | 22 | 0 | 1 | 133 | 1 | 133 | 1.23e-72 | 220 |
MS.gene072840.t1 | MTR_3g102600 | 75.926 | 54 | 13 | 0 | 197 | 250 | 131 | 184 | 3.92e-23 | 93.2 |
MS.gene072840.t1 | MTR_3g102600 | 83.459 | 133 | 22 | 0 | 1 | 133 | 1 | 133 | 7.37e-72 | 219 |
MS.gene072840.t1 | MTR_3g102600 | 73.585 | 53 | 14 | 0 | 197 | 249 | 131 | 183 | 1.14e-20 | 87.8 |
MS.gene072840.t1 | MTR_1g032570 | 59.239 | 184 | 72 | 2 | 67 | 249 | 1 | 182 | 6.76e-64 | 209 |
MS.gene072840.t1 | MTR_3g086100 | 58.696 | 184 | 70 | 3 | 67 | 249 | 1 | 179 | 2.09e-60 | 198 |
MS.gene072840.t1 | MTR_1g013160 | 63.399 | 153 | 50 | 2 | 70 | 221 | 1 | 148 | 1.18e-54 | 173 |
MS.gene072840.t1 | MTR_4g021760 | 39.676 | 247 | 117 | 4 | 3 | 249 | 6 | 220 | 1.33e-51 | 170 |
MS.gene072840.t1 | MTR_4g021845 | 39.095 | 243 | 116 | 3 | 8 | 250 | 10 | 220 | 4.58e-51 | 166 |
MS.gene072840.t1 | MTR_4g021790 | 38.017 | 242 | 118 | 3 | 8 | 249 | 10 | 219 | 4.32e-46 | 155 |
MS.gene072840.t1 | MTR_4g021855 | 36.777 | 242 | 121 | 4 | 8 | 249 | 10 | 219 | 7.32e-45 | 152 |
MS.gene072840.t1 | MTR_3g102600 | 82.143 | 84 | 15 | 0 | 50 | 133 | 1 | 84 | 1.16e-44 | 147 |
MS.gene072840.t1 | MTR_3g102600 | 75.926 | 54 | 13 | 0 | 197 | 250 | 82 | 135 | 1.75e-23 | 92.8 |
MS.gene072840.t1 | MTR_3g102600 | 82.143 | 84 | 15 | 0 | 50 | 133 | 1 | 84 | 6.43e-44 | 146 |
MS.gene072840.t1 | MTR_3g102600 | 73.585 | 53 | 14 | 0 | 197 | 249 | 82 | 134 | 5.94e-21 | 87.0 |
MS.gene072840.t1 | MTR_4g121020 | 48.864 | 176 | 58 | 3 | 87 | 249 | 6 | 162 | 3.55e-43 | 154 |
MS.gene072840.t1 | MTR_0450s0040 | 35.169 | 236 | 128 | 2 | 12 | 247 | 8 | 218 | 1.28e-40 | 143 |
MS.gene072840.t1 | MTR_6g045327 | 35.484 | 248 | 126 | 5 | 1 | 247 | 7 | 221 | 1.39e-37 | 135 |
MS.gene072840.t1 | MTR_8g105600 | 36.179 | 246 | 143 | 5 | 5 | 249 | 6 | 238 | 6.48e-37 | 137 |
MS.gene072840.t1 | MTR_7g026400 | 36.321 | 212 | 115 | 3 | 38 | 249 | 17 | 208 | 2.21e-33 | 127 |
MS.gene072840.t1 | MTR_5g055260 | 32.231 | 242 | 105 | 8 | 8 | 249 | 10 | 192 | 3.90e-28 | 108 |
MS.gene072840.t1 | MTR_8g032710 | 27.969 | 261 | 156 | 6 | 11 | 249 | 20 | 270 | 2.40e-25 | 103 |
MS.gene072840.t1 | MTR_3g092780 | 33.750 | 160 | 93 | 4 | 12 | 159 | 56 | 214 | 5.03e-24 | 100 |
MS.gene072840.t1 | MTR_3g092780 | 33.750 | 160 | 93 | 4 | 12 | 159 | 56 | 214 | 5.71e-24 | 100 |
MS.gene072840.t1 | MTR_3g092780 | 32.919 | 161 | 94 | 4 | 12 | 159 | 56 | 215 | 2.13e-23 | 99.0 |
MS.gene072840.t1 | MTR_3g092780 | 32.919 | 161 | 94 | 4 | 12 | 159 | 56 | 215 | 2.50e-23 | 99.0 |
MS.gene072840.t1 | MTR_6g016850 | 33.548 | 155 | 96 | 4 | 5 | 157 | 6 | 155 | 2.51e-23 | 93.2 |
MS.gene072840.t1 | MTR_8g093040 | 36.923 | 130 | 82 | 0 | 1 | 130 | 7 | 136 | 2.80e-23 | 95.5 |
MS.gene072840.t1 | MTR_4g023980 | 32.941 | 170 | 83 | 3 | 55 | 224 | 36 | 174 | 5.05e-23 | 92.8 |
MS.gene072840.t1 | MTR_4g061360 | 39.344 | 122 | 71 | 1 | 12 | 130 | 89 | 210 | 1.30e-22 | 97.1 |
MS.gene072840.t1 | MTR_7g118260 | 35.915 | 142 | 80 | 3 | 1 | 134 | 1 | 139 | 2.46e-22 | 95.9 |
MS.gene072840.t1 | MTR_7g118260 | 32.039 | 206 | 115 | 5 | 1 | 198 | 1 | 189 | 2.55e-22 | 95.9 |
MS.gene072840.t1 | MTR_1g067110 | 37.705 | 122 | 73 | 2 | 12 | 130 | 85 | 206 | 2.81e-22 | 95.9 |
MS.gene072840.t1 | MTR_1g067110 | 37.705 | 122 | 73 | 2 | 12 | 130 | 85 | 206 | 2.85e-22 | 95.9 |
MS.gene072840.t1 | MTR_8g024260 | 34.868 | 152 | 88 | 2 | 14 | 162 | 38 | 181 | 4.83e-22 | 95.1 |
MS.gene072840.t1 | MTR_3g037390 | 34.677 | 124 | 78 | 1 | 12 | 132 | 24 | 147 | 1.17e-19 | 88.2 |
MS.gene072840.t1 | MTR_4g108880 | 33.582 | 134 | 84 | 2 | 4 | 132 | 23 | 156 | 3.68e-18 | 83.6 |
MS.gene072840.t1 | MTR_3g084390 | 48.101 | 79 | 31 | 2 | 1 | 69 | 1 | 79 | 1.82e-16 | 72.4 |
MS.gene072840.t1 | MTR_5g014040 | 57.627 | 59 | 25 | 0 | 191 | 249 | 304 | 362 | 3.17e-16 | 78.2 |
MS.gene072840.t1 | MTR_5g014040 | 37.600 | 125 | 72 | 3 | 8 | 130 | 14 | 134 | 6.39e-15 | 74.3 |
MS.gene072840.t1 | MTR_5g014040 | 57.627 | 59 | 25 | 0 | 191 | 249 | 264 | 322 | 3.41e-16 | 77.8 |
MS.gene072840.t1 | MTR_2g090675 | 47.222 | 72 | 38 | 0 | 178 | 249 | 141 | 212 | 4.38e-16 | 77.4 |
MS.gene072840.t1 | MTR_4g064730 | 60.377 | 53 | 21 | 0 | 197 | 249 | 130 | 182 | 5.62e-16 | 76.3 |
MS.gene072840.t1 | MTR_7g089010 | 52.308 | 65 | 30 | 1 | 186 | 249 | 78 | 142 | 8.53e-16 | 75.5 |
MS.gene072840.t1 | MTR_4g098870 | 64.815 | 54 | 19 | 0 | 196 | 249 | 328 | 381 | 8.89e-16 | 76.6 |
MS.gene072840.t1 | MTR_4g098870 | 33.065 | 124 | 79 | 2 | 8 | 130 | 34 | 154 | 6.76e-13 | 68.2 |
MS.gene072840.t1 | MTR_4g098870 | 64.815 | 54 | 19 | 0 | 196 | 249 | 308 | 361 | 9.34e-16 | 76.6 |
MS.gene072840.t1 | MTR_4g098870 | 33.065 | 124 | 79 | 2 | 8 | 130 | 14 | 134 | 7.38e-13 | 68.2 |
MS.gene072840.t1 | MTR_4g098870 | 64.815 | 54 | 19 | 0 | 196 | 249 | 328 | 381 | 9.62e-16 | 76.6 |
MS.gene072840.t1 | MTR_4g098870 | 33.065 | 124 | 79 | 2 | 8 | 130 | 34 | 154 | 1.10e-12 | 67.4 |
MS.gene072840.t1 | MTR_4g098870 | 64.815 | 54 | 19 | 0 | 196 | 249 | 308 | 361 | 9.74e-16 | 76.6 |
MS.gene072840.t1 | MTR_4g098870 | 33.065 | 124 | 79 | 2 | 8 | 130 | 14 | 134 | 1.23e-12 | 67.4 |
MS.gene072840.t1 | MTR_4g098870 | 64.815 | 54 | 19 | 0 | 196 | 249 | 347 | 400 | 1.02e-15 | 76.6 |
MS.gene072840.t1 | MTR_4g098870 | 33.065 | 124 | 79 | 2 | 8 | 130 | 53 | 173 | 9.15e-13 | 67.8 |
MS.gene072840.t1 | MTR_4g078810 | 54.386 | 57 | 26 | 0 | 193 | 249 | 153 | 209 | 1.19e-15 | 76.3 |
MS.gene072840.t1 | MTR_5g014040 | 55.932 | 59 | 26 | 0 | 191 | 249 | 304 | 362 | 4.37e-15 | 74.7 |
MS.gene072840.t1 | MTR_5g014040 | 37.600 | 125 | 72 | 3 | 8 | 130 | 14 | 134 | 6.74e-15 | 73.9 |
MS.gene072840.t1 | MTR_6g088950 | 29.600 | 125 | 87 | 1 | 10 | 133 | 5 | 129 | 5.29e-13 | 66.6 |
MS.gene072840.t1 | MTR_7g115530 | 61.111 | 54 | 20 | 1 | 196 | 248 | 216 | 269 | 1.10e-12 | 66.6 |
MS.gene072840.t1 | MTR_7g115530 | 58.182 | 55 | 22 | 1 | 196 | 249 | 216 | 270 | 1.39e-12 | 66.6 |
MS.gene072840.t1 | MTR_7g115530 | 58.182 | 55 | 22 | 1 | 196 | 249 | 216 | 270 | 1.72e-12 | 66.2 |
MS.gene072840.t1 | MTR_7g115530 | 58.182 | 55 | 22 | 1 | 196 | 249 | 216 | 270 | 2.19e-12 | 66.6 |
MS.gene072840.t1 | MTR_7g115530 | 60.377 | 53 | 20 | 1 | 196 | 247 | 216 | 268 | 2.71e-12 | 65.5 |
MS.gene072840.t1 | MTR_7g115530 | 58.182 | 55 | 22 | 1 | 196 | 249 | 216 | 270 | 2.97e-12 | 65.9 |
MS.gene072840.t1 | MTR_8g038620 | 28.221 | 163 | 90 | 3 | 12 | 147 | 9 | 171 | 4.91e-12 | 63.2 |
MS.gene072840.t1 | MTR_1g080330 | 52.632 | 57 | 26 | 1 | 194 | 249 | 171 | 227 | 1.00e-11 | 64.3 |
MS.gene072840.t1 | MTR_1g080330 | 49.206 | 63 | 31 | 1 | 188 | 249 | 165 | 227 | 1.01e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072840.t1 | AT2G25180 | 68.571 | 245 | 67 | 5 | 6 | 249 | 11 | 246 | 1.10e-106 | 320 |
MS.gene072840.t1 | AT4G31920 | 67.213 | 244 | 60 | 3 | 6 | 249 | 11 | 234 | 1.19e-105 | 317 |
MS.gene072840.t1 | AT3G16857 | 55.056 | 267 | 84 | 5 | 8 | 249 | 33 | 288 | 3.69e-90 | 280 |
MS.gene072840.t1 | AT3G16857 | 56.226 | 265 | 84 | 5 | 8 | 249 | 33 | 288 | 5.50e-90 | 280 |
MS.gene072840.t1 | AT2G01760 | 55.870 | 247 | 106 | 3 | 6 | 249 | 5 | 251 | 1.21e-83 | 254 |
MS.gene072840.t1 | AT5G58080 | 55.426 | 258 | 85 | 4 | 2 | 249 | 8 | 245 | 1.33e-80 | 254 |
MS.gene072840.t1 | AT1G67710 | 55.952 | 252 | 101 | 5 | 1 | 249 | 1 | 245 | 2.54e-79 | 248 |
MS.gene072840.t1 | AT2G01760 | 50.182 | 275 | 106 | 4 | 6 | 249 | 5 | 279 | 1.18e-77 | 240 |
MS.gene072840.t1 | AT3G16857 | 55.310 | 226 | 69 | 5 | 47 | 249 | 2 | 218 | 7.24e-71 | 228 |
MS.gene072840.t1 | AT5G49240 | 39.506 | 243 | 142 | 2 | 8 | 250 | 38 | 275 | 2.41e-56 | 182 |
MS.gene072840.t1 | AT2G01760 | 53.763 | 186 | 83 | 3 | 67 | 249 | 1 | 186 | 2.37e-53 | 175 |
MS.gene072840.t1 | AT1G67710 | 55.914 | 186 | 73 | 4 | 67 | 249 | 1 | 180 | 1.57e-52 | 177 |
MS.gene072840.t1 | AT3G62670 | 38.272 | 243 | 127 | 6 | 13 | 249 | 42 | 267 | 6.54e-42 | 148 |
MS.gene072840.t1 | AT1G49190 | 35.887 | 248 | 144 | 5 | 7 | 247 | 29 | 268 | 6.45e-40 | 142 |
MS.gene072840.t1 | AT1G67710 | 50.602 | 166 | 73 | 4 | 87 | 249 | 12 | 171 | 1.12e-37 | 137 |
MS.gene072840.t1 | AT5G07210 | 30.970 | 268 | 149 | 7 | 10 | 249 | 14 | 273 | 5.82e-30 | 117 |
MS.gene072840.t1 | AT5G07210 | 30.072 | 276 | 149 | 8 | 10 | 249 | 14 | 281 | 1.83e-27 | 110 |
MS.gene072840.t1 | AT2G46790 | 36.598 | 194 | 98 | 6 | 12 | 185 | 37 | 225 | 3.86e-27 | 108 |
MS.gene072840.t1 | AT2G46790 | 36.598 | 194 | 98 | 6 | 12 | 185 | 37 | 225 | 4.35e-27 | 108 |
MS.gene072840.t1 | AT1G49190 | 39.200 | 125 | 76 | 0 | 7 | 131 | 29 | 153 | 4.49e-27 | 109 |
MS.gene072840.t1 | AT5G24470 | 35.366 | 164 | 92 | 4 | 10 | 168 | 48 | 202 | 2.30e-25 | 104 |
MS.gene072840.t1 | AT2G27070 | 29.151 | 271 | 153 | 8 | 10 | 249 | 14 | 276 | 5.31e-24 | 100 |
MS.gene072840.t1 | AT5G60100 | 34.555 | 191 | 95 | 6 | 8 | 171 | 59 | 246 | 9.62e-23 | 96.3 |
MS.gene072840.t1 | AT5G60100 | 34.555 | 191 | 95 | 6 | 8 | 171 | 59 | 246 | 9.62e-23 | 96.3 |
MS.gene072840.t1 | AT5G60100 | 34.555 | 191 | 95 | 6 | 8 | 171 | 59 | 246 | 9.62e-23 | 96.3 |
MS.gene072840.t1 | AT5G60100 | 34.555 | 191 | 95 | 6 | 8 | 171 | 59 | 246 | 1.98e-22 | 95.9 |
MS.gene072840.t1 | AT5G60100 | 34.555 | 191 | 95 | 6 | 8 | 171 | 59 | 246 | 1.98e-22 | 95.9 |
MS.gene072840.t1 | AT5G60100 | 34.555 | 191 | 95 | 6 | 8 | 171 | 59 | 246 | 1.98e-22 | 95.9 |
MS.gene072840.t1 | AT5G60100 | 37.795 | 127 | 75 | 2 | 8 | 130 | 59 | 185 | 4.16e-22 | 95.1 |
MS.gene072840.t1 | AT5G02810 | 38.525 | 122 | 72 | 1 | 12 | 130 | 78 | 199 | 1.23e-21 | 94.0 |
MS.gene072840.t1 | AT1G68210 | 26.866 | 268 | 159 | 4 | 12 | 249 | 13 | 273 | 2.77e-20 | 90.1 |
MS.gene072840.t1 | AT5G61380 | 34.677 | 124 | 78 | 1 | 12 | 132 | 19 | 142 | 4.69e-19 | 86.3 |
MS.gene072840.t1 | AT5G44190 | 66.667 | 54 | 18 | 0 | 196 | 249 | 145 | 198 | 4.77e-18 | 82.4 |
MS.gene072840.t1 | AT5G44190 | 66.667 | 54 | 18 | 0 | 196 | 249 | 145 | 198 | 5.49e-18 | 82.8 |
MS.gene072840.t1 | AT5G59570 | 53.425 | 73 | 31 | 2 | 180 | 249 | 120 | 192 | 2.13e-17 | 80.1 |
MS.gene072840.t1 | AT5G59570 | 53.425 | 73 | 31 | 2 | 180 | 249 | 120 | 192 | 2.13e-17 | 80.1 |
MS.gene072840.t1 | AT2G40970 | 47.368 | 76 | 39 | 1 | 175 | 249 | 81 | 156 | 1.30e-16 | 77.0 |
MS.gene072840.t1 | AT3G46640 | 50.000 | 68 | 34 | 0 | 182 | 249 | 128 | 195 | 1.60e-16 | 77.8 |
MS.gene072840.t1 | AT3G46640 | 50.000 | 68 | 34 | 0 | 182 | 249 | 128 | 195 | 1.84e-16 | 77.8 |
MS.gene072840.t1 | AT3G46640 | 50.000 | 68 | 34 | 0 | 182 | 249 | 128 | 195 | 1.84e-16 | 77.8 |
MS.gene072840.t1 | AT2G20570 | 43.333 | 90 | 47 | 1 | 160 | 249 | 119 | 204 | 1.28e-15 | 75.9 |
MS.gene072840.t1 | AT5G05090 | 58.491 | 53 | 22 | 0 | 197 | 249 | 80 | 132 | 2.01e-15 | 73.9 |
MS.gene072840.t1 | AT3G10760 | 58.491 | 53 | 22 | 0 | 197 | 249 | 104 | 156 | 2.12e-15 | 74.7 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.56e-15 | 75.5 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.95e-14 | 72.4 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.56e-15 | 75.5 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.95e-14 | 72.4 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.56e-15 | 75.5 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.95e-14 | 72.4 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.56e-15 | 75.5 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.95e-14 | 72.4 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.56e-15 | 75.5 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.95e-14 | 72.4 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.96e-15 | 75.1 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.58e-14 | 72.4 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.96e-15 | 75.1 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.58e-14 | 72.4 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.96e-15 | 75.1 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.58e-14 | 72.4 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.96e-15 | 75.1 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.58e-14 | 72.4 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.96e-15 | 75.1 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.58e-14 | 72.4 |
MS.gene072840.t1 | AT4G18020 | 41.667 | 96 | 49 | 1 | 161 | 249 | 252 | 347 | 2.96e-15 | 75.1 |
MS.gene072840.t1 | AT4G18020 | 34.559 | 136 | 80 | 3 | 6 | 134 | 12 | 145 | 2.58e-14 | 72.4 |
MS.gene072840.t1 | AT2G20570 | 62.000 | 50 | 19 | 0 | 200 | 249 | 171 | 220 | 3.04e-14 | 72.0 |
MS.gene072840.t1 | AT4G00760 | 27.184 | 206 | 122 | 7 | 30 | 215 | 1 | 198 | 1.09e-11 | 64.3 |
MS.gene072840.t1 | AT3G57040 | 29.651 | 172 | 94 | 4 | 12 | 161 | 9 | 175 | 4.75e-11 | 61.2 |
MS.gene072840.t1 | AT3G57040 | 29.651 | 172 | 94 | 4 | 12 | 161 | 9 | 175 | 4.75e-11 | 61.2 |
MS.gene072840.t1 | AT1G59940 | 32.824 | 131 | 76 | 2 | 14 | 132 | 35 | 165 | 7.49e-11 | 60.8 |
MS.gene072840.t1 | AT1G10470 | 31.579 | 133 | 79 | 2 | 12 | 132 | 20 | 152 | 7.80e-11 | 60.8 |
MS.gene072840.t1 | AT1G10470 | 31.579 | 133 | 79 | 2 | 12 | 132 | 34 | 166 | 8.06e-11 | 61.2 |
Find 56 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAACTTGTCTCATGGTTT+TGG | 0.250920 | 3.2:+87730362 | MS.gene072840:CDS |
ACATTTGGCAGCATGTAATT+AGG | 0.295640 | 3.2:+87731858 | MS.gene072840:CDS |
TGAACTTGTGGGACTTGAAA+TGG | 0.326717 | 3.2:+87731586 | MS.gene072840:CDS |
GCAGAAAATTCAGATGAAAA+TGG | 0.333558 | 3.2:+87731971 | MS.gene072840:CDS |
AGAAGAAGCCTCGGGTTGTT+TGG | 0.367984 | 3.2:+87732080 | MS.gene072840:CDS |
TAGAGGAGCTAAAGAACATT+TGG | 0.372140 | 3.2:+87731843 | MS.gene072840:CDS |
GCTGAAACCTGTGAGATTAG+AGG | 0.402851 | 3.2:+87731826 | MS.gene072840:CDS |
ATTTCAGTGTTGTCTGCATA+TGG | 0.417968 | 3.2:+87731752 | MS.gene072840:intron |
CACGCATTCCGATGGGAAAA+CGG | 0.428750 | 3.2:-87730320 | None:intergenic |
CGAGGCTTCTTCTGAGCTGA+TGG | 0.438400 | 3.2:-87732070 | None:intergenic |
GTTGCTGCTGTTAATCAGTT+AGG | 0.449852 | 3.2:+87732127 | MS.gene072840:CDS |
AGCTTAAATCCATCCATGTC+AGG | 0.455967 | 3.2:-87731560 | None:intergenic |
GACTAAGAAAAGAAAGGATC+AGG | 0.456770 | 3.2:+87732000 | MS.gene072840:CDS |
GAAGATGAGGATAAAGAGAA+TGG | 0.467439 | 3.2:+87732031 | MS.gene072840:CDS |
TCCAAAACCATGAGACAAGT+TGG | 0.479542 | 3.2:-87730363 | None:intergenic |
CGACGATCCAACTTGTCTCA+TGG | 0.481091 | 3.2:+87730356 | MS.gene072840:CDS |
TTTAGCTCCTCTAATCTCAC+AGG | 0.481770 | 3.2:-87731833 | None:intergenic |
TTTAAGCTGCTTGAACTTGT+GGG | 0.484142 | 3.2:+87731575 | MS.gene072840:CDS |
TCCGATGGGAAAACGGTCAC+CGG | 0.502454 | 3.2:-87730313 | None:intergenic |
GAAGAAGAAGTCTGATCCAA+AGG | 0.514805 | 3.2:+87731880 | MS.gene072840:CDS |
GACAAAACTACTTCTGATAG+TGG | 0.516959 | 3.2:+87731926 | MS.gene072840:CDS |
GAACGTGGCAAGCCATCTCC+AGG | 0.523004 | 3.2:+87732489 | MS.gene072840:CDS |
ATTTAAGCTGCTTGAACTTG+TGG | 0.531591 | 3.2:+87731574 | MS.gene072840:CDS |
TGTTATTGCTTGACTAGTTG+TGG | 0.534638 | 3.2:-87731474 | None:intergenic |
GCCTCGGGTTGTTTGGTCTG+TGG | 0.542268 | 3.2:+87732087 | MS.gene072840:CDS |
GGCAGTGGACTAAGATCCGC+AGG | 0.543371 | 3.2:+87731947 | MS.gene072840:CDS |
ACTACTTCTGATAGTGGCAG+TGG | 0.549024 | 3.2:+87731932 | MS.gene072840:CDS |
TGTGCACATCACTGATTACC+AGG | 0.551505 | 3.2:-87731535 | None:intergenic |
CATCAGCTCAGAAGAAGCCT+CGG | 0.554303 | 3.2:+87732071 | MS.gene072840:CDS |
GGCGAGAACACGCATTCCGA+TGG | 0.558372 | 3.2:-87730328 | None:intergenic |
CAGATAATCACAGGCACCAT+GGG | 0.562735 | 3.2:-87731804 | None:intergenic |
GAGGCTTCTTCTGAGCTGAT+GGG | 0.565647 | 3.2:-87732069 | None:intergenic |
AAAGCTGACTAAGAAAAGAA+AGG | 0.566687 | 3.2:+87731994 | MS.gene072840:CDS |
ATCAGCTCAGAAGAAGCCTC+GGG | 0.581453 | 3.2:+87732072 | MS.gene072840:CDS |
AGATCCCCACTTACTTATGA+CGG | 0.584541 | 3.2:-87731615 | None:intergenic |
GCAGATAATCACAGGCACCA+TGG | 0.592029 | 3.2:-87731805 | None:intergenic |
TGCATATGGTGATACAAAGC+TGG | 0.593897 | 3.2:+87731766 | MS.gene072840:CDS |
GATCCCCACTTACTTATGAC+GGG | 0.593976 | 3.2:-87731614 | None:intergenic |
GTGCACATGCCTGACATGGA+TGG | 0.600433 | 3.2:+87731551 | MS.gene072840:CDS |
AGGTTTCAGCAGATAATCAC+AGG | 0.609824 | 3.2:-87731813 | None:intergenic |
TGATGTGCACATGCCTGACA+TGG | 0.615041 | 3.2:+87731547 | MS.gene072840:CDS |
TCAGGATGAAGACGAAGATG+AGG | 0.615403 | 3.2:+87732018 | MS.gene072840:CDS |
ACAAGTTGGATCGTCGTCAA+CGG | 0.615563 | 3.2:-87730349 | None:intergenic |
GCGAGAACACGCATTCCGAT+GGG | 0.617268 | 3.2:-87730327 | None:intergenic |
GACCGTGGTATTGACATCTA+CGG | 0.617438 | 3.2:-87730395 | None:intergenic |
CCCACTTACTTATGACGGGA+AGG | 0.626480 | 3.2:-87731610 | None:intergenic |
GATACAAAGCTGGTGATGAA+AGG | 0.634012 | 3.2:+87731776 | MS.gene072840:CDS |
AAATATCACAAGGGAGAACG+TGG | 0.641409 | 3.2:+87732474 | MS.gene072840:CDS |
TAACAGCAGCAACAAACTTG+CGG | 0.664827 | 3.2:-87732117 | None:intergenic |
TCCACAGACCAAACAACCCG+AGG | 0.670707 | 3.2:-87732088 | None:intergenic |
AAACAAAGACAAGTTTGACC+TGG | 0.671629 | 3.2:+87731517 | MS.gene072840:CDS |
CTCCGTAGATGTCAATACCA+CGG | 0.676022 | 3.2:+87730393 | MS.gene072840:CDS |
TGAATGTCGAAAATATCACA+AGG | 0.689686 | 3.2:+87732464 | MS.gene072840:CDS |
GTGATGAAAGGAATTTCCCA+TGG | 0.694201 | 3.2:+87731788 | MS.gene072840:CDS |
GAATGTCGAAAATATCACAA+GGG | 0.725612 | 3.2:+87732465 | MS.gene072840:CDS |
AGAGAATGGTAATGACAACG+AGG | 0.788270 | 3.2:+87732045 | MS.gene072840:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTATTTGAATTTC+TGG | - | chr3.2:87730584-87730603 | None:intergenic | 10.0% |
!! | ATAAAAAAAAACATGTCTTT+AGG | + | chr3.2:87730593-87730612 | MS.gene072840:intron | 15.0% |
!! | TCAAAATGAATAAATAGAAA+AGG | - | chr3.2:87731674-87731693 | None:intergenic | 15.0% |
!!! | ATATATTTCATTTTGTTTAG+TGG | + | chr3.2:87731028-87731047 | MS.gene072840:intron | 15.0% |
!!! | ATCATATCAAGAATTTTTTT+GGG | - | chr3.2:87732445-87732464 | None:intergenic | 15.0% |
!! | ATAATACTCAAATTCAGTAA+TGG | - | chr3.2:87732389-87732408 | None:intergenic | 20.0% |
!! | ATATCTAGTAAAAATATGCT+TGG | - | chr3.2:87730930-87730949 | None:intergenic | 20.0% |
!! | ATTAACACCAAAACAAAAAA+TGG | - | chr3.2:87731084-87731103 | None:intergenic | 20.0% |
!!! | CAATTTTTACAGATTTTATG+TGG | + | chr3.2:87730794-87730813 | MS.gene072840:intron | 20.0% |
!!! | CATCATATCAAGAATTTTTT+TGG | - | chr3.2:87732446-87732465 | None:intergenic | 20.0% |
!!! | TATTTTTACTAGATATGTGA+AGG | + | chr3.2:87730934-87730953 | MS.gene072840:intron | 20.0% |
!!! | TCAAAATGTTTTTGAATATC+TGG | + | chr3.2:87732250-87732269 | MS.gene072840:intron | 20.0% |
! | AACGATATTGTGTAGATATT+TGG | + | chr3.2:87730653-87730672 | MS.gene072840:intron | 25.0% |
! | AAGAAAAAAATTAACAGCTG+AGG | - | chr3.2:87731651-87731670 | None:intergenic | 25.0% |
! | ATAAAAATTGTTTGTGTTGC+AGG | - | chr3.2:87732178-87732197 | None:intergenic | 25.0% |
! | ATGAAAAGAGTCATGATTTA+GGG | + | chr3.2:87730701-87730720 | MS.gene072840:intron | 25.0% |
! | CAAAGACAAGAAAAGAAAAA+TGG | - | chr3.2:87731284-87731303 | None:intergenic | 25.0% |
! | TAATGGAATACTTTATGACA+TGG | - | chr3.2:87732372-87732391 | None:intergenic | 25.0% |
! | TACTAATCATGAAGAAATAC+AGG | - | chr3.2:87731340-87731359 | None:intergenic | 25.0% |
! | TGTTTCTTTATACTATCACA+GGG | - | chr3.2:87730776-87730795 | None:intergenic | 25.0% |
!! | GGAACTTTTACTAAGAATAA+AGG | + | chr3.2:87730674-87730693 | MS.gene072840:intron | 25.0% |
!! | TTGTTTCTTTATACTATCAC+AGG | - | chr3.2:87730777-87730796 | None:intergenic | 25.0% |
!!! | AAGTGATACTTATTTCTGAT+TGG | + | chr3.2:87731439-87731458 | MS.gene072840:intron | 25.0% |
!!! | AGTGATACTTATTTCTGATT+GGG | + | chr3.2:87731440-87731459 | MS.gene072840:intron | 25.0% |
!!! | CGATGTTTATTTTAAATCCT+AGG | + | chr3.2:87732275-87732294 | MS.gene072840:intron | 25.0% |
!!! | TCATAAGTCATTTTAAACCT+AGG | - | chr3.2:87732295-87732314 | None:intergenic | 25.0% |
!!! | TCATTTTGACTCTTGTTTAT+TGG | + | chr3.2:87731685-87731704 | MS.gene072840:intron | 25.0% |
AAAGCTGACTAAGAAAAGAA+AGG | + | chr3.2:87731994-87732013 | MS.gene072840:CDS | 30.0% | |
AAGTCAACACACTATGAATT+TGG | - | chr3.2:87730736-87730755 | None:intergenic | 30.0% | |
ACTTAATTATGTGCTTGCTT+GGG | + | chr3.2:87730896-87730915 | MS.gene072840:intron | 30.0% | |
ATAAAATTCAGTAAAGCTCG+AGG | - | chr3.2:87732214-87732233 | None:intergenic | 30.0% | |
GAATGTCGAAAATATCACAA+GGG | + | chr3.2:87732465-87732484 | MS.gene072840:CDS | 30.0% | |
GATGAAAAGAGTCATGATTT+AGG | + | chr3.2:87730700-87730719 | MS.gene072840:intron | 30.0% | |
GCAGAAAATTCAGATGAAAA+TGG | + | chr3.2:87731971-87731990 | MS.gene072840:CDS | 30.0% | |
TGAATGTCGAAAATATCACA+AGG | + | chr3.2:87732464-87732483 | MS.gene072840:CDS | 30.0% | |
TTGACTATAACCAAGTGATT+GGG | - | chr3.2:87731261-87731280 | None:intergenic | 30.0% | |
! | AAGCAATGAAGCTCTAATTA+CGG | - | chr3.2:87730965-87730984 | None:intergenic | 30.0% |
!! | CTTTAGGATCAAATCTAACT+GGG | + | chr3.2:87730609-87730628 | MS.gene072840:intron | 30.0% |
!! | GTGATACTTATTTCTGATTG+GGG | + | chr3.2:87731441-87731460 | MS.gene072840:intron | 30.0% |
!! | TCTTTAGGATCAAATCTAAC+TGG | + | chr3.2:87730608-87730627 | MS.gene072840:intron | 30.0% |
!! | TTCACTGTTGCTTTCTTTAT+TGG | + | chr3.2:87731378-87731397 | MS.gene072840:intron | 30.0% |
!! | TTCATTTTGTTTAGTGGCTT+TGG | + | chr3.2:87731034-87731053 | MS.gene072840:intron | 30.0% |
!!! | TAATGTTGTTTTACTTGCAG+AGG | + | chr3.2:87732414-87732433 | MS.gene072840:intron | 30.0% |
!!! | TGGTCAACCATTTTTTGTTT+TGG | + | chr3.2:87731074-87731093 | MS.gene072840:intron | 30.0% |
AAACAAAGACAAGTTTGACC+TGG | + | chr3.2:87731517-87731536 | MS.gene072840:CDS | 35.0% | |
AATATTCCGGAGTTTAGTCA+GGG | + | chr3.2:87731149-87731168 | MS.gene072840:intron | 35.0% | |
ACATTTGGCAGCATGTAATT+AGG | + | chr3.2:87731858-87731877 | MS.gene072840:CDS | 35.0% | |
ATTTAAGCTGCTTGAACTTG+TGG | + | chr3.2:87731574-87731593 | MS.gene072840:CDS | 35.0% | |
ATTTCAGTGTTGTCTGCATA+TGG | + | chr3.2:87731752-87731771 | MS.gene072840:intron | 35.0% | |
CACTTAATTATGTGCTTGCT+TGG | + | chr3.2:87730895-87730914 | MS.gene072840:intron | 35.0% | |
GAAATGAAATTCATCCCAAG+TGG | - | chr3.2:87732327-87732346 | None:intergenic | 35.0% | |
GAAGATGAGGATAAAGAGAA+TGG | + | chr3.2:87732031-87732050 | MS.gene072840:CDS | 35.0% | |
GACAAAACTACTTCTGATAG+TGG | + | chr3.2:87731926-87731945 | MS.gene072840:CDS | 35.0% | |
GACTAAGAAAAGAAAGGATC+AGG | + | chr3.2:87732000-87732019 | MS.gene072840:CDS | 35.0% | |
GATCAAATCTAACTGGGAAA+TGG | + | chr3.2:87730615-87730634 | MS.gene072840:intron | 35.0% | |
GTTGACTATAACCAAGTGAT+TGG | - | chr3.2:87731262-87731281 | None:intergenic | 35.0% | |
TAATATTCCGGAGTTTAGTC+AGG | + | chr3.2:87731148-87731167 | MS.gene072840:intron | 35.0% | |
TAGAGGAGCTAAAGAACATT+TGG | + | chr3.2:87731843-87731862 | MS.gene072840:CDS | 35.0% | |
TGACTAAACTCCGGAATATT+AGG | - | chr3.2:87731149-87731168 | None:intergenic | 35.0% | |
TGGACTGAATATGCACTTTA+TGG | + | chr3.2:87731054-87731073 | MS.gene072840:intron | 35.0% | |
TTATGATGATAGATGCCACT+TGG | + | chr3.2:87732309-87732328 | MS.gene072840:intron | 35.0% | |
TTTAAGCTGCTTGAACTTGT+GGG | + | chr3.2:87731575-87731594 | MS.gene072840:CDS | 35.0% | |
! | ACTGTTGTTGCTTAGATTTC+AGG | + | chr3.2:87731312-87731331 | MS.gene072840:intron | 35.0% |
! | ATGAGCAACTTTTCCTACTA+CGG | - | chr3.2:87731000-87731019 | None:intergenic | 35.0% |
! | TATGATGATAGATGCCACTT+GGG | + | chr3.2:87732310-87732329 | MS.gene072840:intron | 35.0% |
! | TGTTATTGCTTGACTAGTTG+TGG | - | chr3.2:87731477-87731496 | None:intergenic | 35.0% |
!!! | AGTAGTTTTGTCTGGTTTAC+TGG | - | chr3.2:87731918-87731937 | None:intergenic | 35.0% |
!!! | CTATCAGAAGTAGTTTTGTC+TGG | - | chr3.2:87731926-87731945 | None:intergenic | 35.0% |
!!! | CTGGTTTTGTTTTTCTCCTT+TGG | - | chr3.2:87731899-87731918 | None:intergenic | 35.0% |
!!! | GTCTTTGTTTTCTCTCAACA+TGG | - | chr3.2:87731507-87731526 | None:intergenic | 35.0% |
AAATATCACAAGGGAGAACG+TGG | + | chr3.2:87732474-87732493 | MS.gene072840:CDS | 40.0% | |
AGATCCCCACTTACTTATGA+CGG | - | chr3.2:87731618-87731637 | None:intergenic | 40.0% | |
AGCTTAAATCCATCCATGTC+AGG | - | chr3.2:87731563-87731582 | None:intergenic | 40.0% | |
AGGTTTCAGCAGATAATCAC+AGG | - | chr3.2:87731816-87731835 | None:intergenic | 40.0% | |
CTAAACTCCGGAATATTAGG+AGG | - | chr3.2:87731146-87731165 | None:intergenic | 40.0% | |
GAAGAAGAAGTCTGATCCAA+AGG | + | chr3.2:87731880-87731899 | MS.gene072840:CDS | 40.0% | |
GTGATGAAAGGAATTTCCCA+TGG | + | chr3.2:87731788-87731807 | MS.gene072840:CDS | 40.0% | |
GTTGCTGCTGTTAATCAGTT+AGG | + | chr3.2:87732127-87732146 | MS.gene072840:CDS | 40.0% | |
TAACAGCAGCAACAAACTTG+CGG | - | chr3.2:87732120-87732139 | None:intergenic | 40.0% | |
TAGAGCTTCATTGCTTGTAG+AGG | + | chr3.2:87730969-87730988 | MS.gene072840:intron | 40.0% | |
TCCAAAACCATGAGACAAGT+TGG | - | chr3.2:87730366-87730385 | None:intergenic | 40.0% | |
TCTAACTGGGAAATGGAGTT+AGG | + | chr3.2:87730622-87730641 | MS.gene072840:intron | 40.0% | |
TGAACTTGTGGGACTTGAAA+TGG | + | chr3.2:87731586-87731605 | MS.gene072840:CDS | 40.0% | |
TGATTGGGATCAAGAGGTTA+AGG | - | chr3.2:87731246-87731265 | None:intergenic | 40.0% | |
TGCATATGGTGATACAAAGC+TGG | + | chr3.2:87731766-87731785 | MS.gene072840:CDS | 40.0% | |
! | AGAGAATGGTAATGACAACG+AGG | + | chr3.2:87732045-87732064 | MS.gene072840:CDS | 40.0% |
! | ATCTGAATTTTCTGCTCCTG+CGG | - | chr3.2:87731966-87731985 | None:intergenic | 40.0% |
! | GAGTCATGATTTAGGGTCAA+AGG | + | chr3.2:87730708-87730727 | MS.gene072840:intron | 40.0% |
! | GATACAAAGCTGGTGATGAA+AGG | + | chr3.2:87731776-87731795 | MS.gene072840:CDS | 40.0% |
! | TCCAACTTGTCTCATGGTTT+TGG | + | chr3.2:87730362-87730381 | MS.gene072840:CDS | 40.0% |
! | TTTAGCTCCTCTAATCTCAC+AGG | - | chr3.2:87731836-87731855 | None:intergenic | 40.0% |
ACCAAGTGATTGGGATCAAG+AGG | - | chr3.2:87731252-87731271 | None:intergenic | 45.0% | |
ACCTCTTGATCCCAATCACT+TGG | + | chr3.2:87731248-87731267 | MS.gene072840:intron | 45.0% | |
ACCTTCCCGTCATAAGTAAG+TGG | + | chr3.2:87731609-87731628 | MS.gene072840:intron | 45.0% | |
CAGATAATCACAGGCACCAT+GGG | - | chr3.2:87731807-87731826 | None:intergenic | 45.0% | |
CCTTCCCGTCATAAGTAAGT+GGG | + | chr3.2:87731610-87731629 | MS.gene072840:intron | 45.0% | |
CTCCGTAGATGTCAATACCA+CGG | + | chr3.2:87730393-87730412 | MS.gene072840:CDS | 45.0% | |
CTCTCGAATGATTCCTCCTA+GGG | + | chr3.2:87731215-87731234 | MS.gene072840:intron | 45.0% | |
CTTCCCGTCATAAGTAAGTG+GGG | + | chr3.2:87731611-87731630 | MS.gene072840:intron | 45.0% | |
GATCCCCACTTACTTATGAC+GGG | - | chr3.2:87731617-87731636 | None:intergenic | 45.0% | |
GCTGAAACCTGTGAGATTAG+AGG | + | chr3.2:87731826-87731845 | MS.gene072840:CDS | 45.0% | |
GTCAATACCACGGTCAGATT+CGG | + | chr3.2:87730403-87730422 | MS.gene072840:intron | 45.0% | |
GTCAGGGAGGTAATTGAACT+CGG | + | chr3.2:87731165-87731184 | MS.gene072840:intron | 45.0% | |
TCAGGATGAAGACGAAGATG+AGG | + | chr3.2:87732018-87732037 | MS.gene072840:CDS | 45.0% | |
TCAGGGAGGTAATTGAACTC+GGG | + | chr3.2:87731166-87731185 | MS.gene072840:intron | 45.0% | |
TCTCGAATGATTCCTCCTAG+GGG | + | chr3.2:87731216-87731235 | MS.gene072840:intron | 45.0% | |
TCTCTCGAATGATTCCTCCT+AGG | + | chr3.2:87731214-87731233 | MS.gene072840:intron | 45.0% | |
TGTAGAGGTAGTACCGTAGT+AGG | + | chr3.2:87730984-87731003 | MS.gene072840:intron | 45.0% | |
TTACCTCCCTGACTAAACTC+CGG | - | chr3.2:87731158-87731177 | None:intergenic | 45.0% | |
! | ACAAGTTGGATCGTCGTCAA+CGG | - | chr3.2:87730352-87730371 | None:intergenic | 45.0% |
! | TGTGCACATCACTGATTACC+AGG | - | chr3.2:87731538-87731557 | None:intergenic | 45.0% |
!! | ACTACTTCTGATAGTGGCAG+TGG | + | chr3.2:87731932-87731951 | MS.gene072840:CDS | 45.0% |
!! | GACCGTGGTATTGACATCTA+CGG | - | chr3.2:87730398-87730417 | None:intergenic | 45.0% |
ACTAGATCCGAATCTGACCG+TGG | - | chr3.2:87730413-87730432 | None:intergenic | 50.0% | |
AGAACCCGAGCTTGATTCAC+AGG | - | chr3.2:87731197-87731216 | None:intergenic | 50.0% | |
ATCAGCTCAGAAGAAGCCTC+GGG | + | chr3.2:87732072-87732091 | MS.gene072840:CDS | 50.0% | |
ATTCCGGAGTTTAGTCAGGG+AGG | + | chr3.2:87731152-87731171 | MS.gene072840:intron | 50.0% | |
CACGCATTCCGATGGGAAAA+CGG | - | chr3.2:87730323-87730342 | None:intergenic | 50.0% | |
CATCAGCTCAGAAGAAGCCT+CGG | + | chr3.2:87732071-87732090 | MS.gene072840:CDS | 50.0% | |
CGACGATCCAACTTGTCTCA+TGG | + | chr3.2:87730356-87730375 | MS.gene072840:CDS | 50.0% | |
CTCGAATGATTCCTCCTAGG+GGG | + | chr3.2:87731217-87731236 | MS.gene072840:intron | 50.0% | |
GAGGCTTCTTCTGAGCTGAT+GGG | - | chr3.2:87732072-87732091 | None:intergenic | 50.0% | |
GCAGATAATCACAGGCACCA+TGG | - | chr3.2:87731808-87731827 | None:intergenic | 50.0% | |
GTTAATCCTCCTGCTCTCGA+GGG | + | chr3.2:87731098-87731117 | MS.gene072840:intron | 50.0% | |
TCGAATGATTCCTCCTAGGG+GGG | + | chr3.2:87731218-87731237 | MS.gene072840:intron | 50.0% | |
TGATGTGCACATGCCTGACA+TGG | + | chr3.2:87731547-87731566 | MS.gene072840:CDS | 50.0% | |
TGTTAATCCTCCTGCTCTCG+AGG | + | chr3.2:87731097-87731116 | MS.gene072840:intron | 50.0% | |
TTCCGCCTGTGAATCAAGCT+CGG | + | chr3.2:87731189-87731208 | MS.gene072840:intron | 50.0% | |
! | AGAAGAAGCCTCGGGTTGTT+TGG | + | chr3.2:87732080-87732099 | MS.gene072840:CDS | 50.0% |
! | CCCACTTACTTATGACGGGA+AGG | - | chr3.2:87731613-87731632 | None:intergenic | 50.0% |
ACCCGAGCTTGATTCACAGG+CGG | - | chr3.2:87731194-87731213 | None:intergenic | 55.0% | |
CGAGGCTTCTTCTGAGCTGA+TGG | - | chr3.2:87732073-87732092 | None:intergenic | 55.0% | |
GCGAGAACACGCATTCCGAT+GGG | - | chr3.2:87730330-87730349 | None:intergenic | 55.0% | |
GGGGAGGCCTCCTAATATTC+CGG | + | chr3.2:87731136-87731155 | MS.gene072840:intron | 55.0% | |
GTGCACATGCCTGACATGGA+TGG | + | chr3.2:87731551-87731570 | MS.gene072840:CDS | 55.0% | |
TCCACAGACCAAACAACCCG+AGG | - | chr3.2:87732091-87732110 | None:intergenic | 55.0% | |
TCCGATGGGAAAACGGTCAC+CGG | - | chr3.2:87730316-87730335 | None:intergenic | 55.0% | |
TCCGCCTGTGAATCAAGCTC+GGG | + | chr3.2:87731190-87731209 | MS.gene072840:intron | 55.0% | |
! | TCCGGTGACCGTTTTCCCAT+CGG | + | chr3.2:87730312-87730331 | MS.gene072840:CDS | 55.0% |
AGAGGTTAAGGAGCCCCCCT+AGG | - | chr3.2:87731234-87731253 | None:intergenic | 60.0% | |
AGGGAAGGACCCCTCTCAAG+GGG | + | chr3.2:87731117-87731136 | MS.gene072840:intron | 60.0% | |
ATCCTCCTGCTCTCGAGGGA+AGG | + | chr3.2:87731102-87731121 | MS.gene072840:intron | 60.0% | |
GAACGTGGCAAGCCATCTCC+AGG | + | chr3.2:87732489-87732508 | MS.gene072840:CDS | 60.0% | |
GAGGGAAGGACCCCTCTCAA+GGG | + | chr3.2:87731116-87731135 | MS.gene072840:intron | 60.0% | |
GGCGAGAACACGCATTCCGA+TGG | - | chr3.2:87730331-87730350 | None:intergenic | 60.0% | |
TAGGAGGCCTCCCCTTGAGA+GGG | - | chr3.2:87731130-87731149 | None:intergenic | 60.0% | |
TTAGGAGGCCTCCCCTTGAG+AGG | - | chr3.2:87731131-87731150 | None:intergenic | 60.0% | |
! | GCCTCGGGTTGTTTGGTCTG+TGG | + | chr3.2:87732087-87732106 | MS.gene072840:CDS | 60.0% |
!! | GGCAGTGGACTAAGATCCGC+AGG | + | chr3.2:87731947-87731966 | MS.gene072840:CDS | 60.0% |
AGGAGGCCTCCCCTTGAGAG+GGG | - | chr3.2:87731129-87731148 | None:intergenic | 65.0% | |
CGAGGGAAGGACCCCTCTCA+AGG | + | chr3.2:87731115-87731134 | MS.gene072840:intron | 65.0% | |
GAAGGACCCCTCTCAAGGGG+AGG | + | chr3.2:87731120-87731139 | MS.gene072840:intron | 65.0% | |
GGTTAAGGAGCCCCCCTAGG+AGG | - | chr3.2:87731231-87731250 | None:intergenic | 65.0% | |
GTCCTTCCCTCGAGAGCAGG+AGG | - | chr3.2:87731107-87731126 | None:intergenic | 65.0% | |
GGGGTCCTTCCCTCGAGAGC+AGG | - | chr3.2:87731110-87731129 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 87730303 | 87732522 | 87730303 | ID=MS.gene072840 |
chr3.2 | mRNA | 87730303 | 87732522 | 87730303 | ID=MS.gene072840.t1;Parent=MS.gene072840 |
chr3.2 | exon | 87730303 | 87730414 | 87730303 | ID=MS.gene072840.t1.exon1;Parent=MS.gene072840.t1 |
chr3.2 | CDS | 87730303 | 87730414 | 87730303 | ID=cds.MS.gene072840.t1;Parent=MS.gene072840.t1 |
chr3.2 | exon | 87731471 | 87731623 | 87731471 | ID=MS.gene072840.t1.exon2;Parent=MS.gene072840.t1 |
chr3.2 | CDS | 87731471 | 87731623 | 87731471 | ID=cds.MS.gene072840.t1;Parent=MS.gene072840.t1 |
chr3.2 | exon | 87731759 | 87732157 | 87731759 | ID=MS.gene072840.t1.exon3;Parent=MS.gene072840.t1 |
chr3.2 | CDS | 87731759 | 87732157 | 87731759 | ID=cds.MS.gene072840.t1;Parent=MS.gene072840.t1 |
chr3.2 | exon | 87732434 | 87732522 | 87732434 | ID=MS.gene072840.t1.exon4;Parent=MS.gene072840.t1 |
chr3.2 | CDS | 87732434 | 87732522 | 87732434 | ID=cds.MS.gene072840.t1;Parent=MS.gene072840.t1 |
Gene Sequence |
Protein sequence |