AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073229

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073229.t1 MTR_3g069780 96.226 371 14 0 1 371 1 371 0.0 740
MS.gene073229.t1 MTR_3g438030 95.148 371 18 0 1 371 1 371 0.0 732
MS.gene073229.t1 MTR_3g069520 85.255 373 49 3 1 371 1 369 0.0 642
MS.gene073229.t1 MTR_3g448360 80.697 373 68 3 1 371 1 371 0.0 613
MS.gene073229.t1 MTR_2g079090 68.449 374 100 7 1 371 1 359 3.76e-179 501
MS.gene073229.t1 MTR_0029s0050 68.449 374 100 7 1 371 1 359 1.06e-177 498
MS.gene073229.t1 MTR_3g463960 63.918 388 122 5 1 371 2 388 4.05e-177 498
MS.gene073229.t1 MTR_3g463950 63.918 388 122 5 1 371 2 388 4.05e-177 498
MS.gene073229.t1 MTR_3g463970 63.918 388 122 5 1 371 2 388 4.05e-177 498
MS.gene073229.t1 MTR_3g463940 63.918 388 122 5 1 371 2 388 4.05e-177 498
MS.gene073229.t1 MTR_2g079080 67.647 374 103 7 1 371 1 359 1.20e-176 495
MS.gene073229.t1 MTR_0029s0100 67.914 374 102 7 1 371 1 359 2.52e-175 492
MS.gene073229.t1 MTR_3g463930 61.616 396 125 7 1 371 2 395 5.41e-168 474
MS.gene073229.t1 MTR_2g043980 58.667 375 131 7 1 371 7 361 2.91e-151 431
MS.gene073229.t1 MTR_2g015650 51.882 372 171 5 5 371 6 374 8.44e-129 374
MS.gene073229.t1 MTR_2g015670 49.861 361 161 7 15 371 16 360 2.41e-115 340
MS.gene073229.t1 MTR_2g015630 46.512 344 168 7 35 368 36 373 2.23e-101 305
MS.gene073229.t1 MTR_2g015580 45.058 344 177 4 28 364 45 383 2.44e-100 303
MS.gene073229.t1 MTR_2g043990 51.014 296 114 6 1 292 69 337 8.35e-95 286
MS.gene073229.t1 MTR_2g015590 44.152 342 178 7 28 361 29 365 8.32e-92 280
MS.gene073229.t1 MTR_3g466240 57.014 221 62 3 104 319 2 194 1.62e-76 234
MS.gene073229.t1 MTR_4g104240 38.329 347 187 12 27 361 36 367 2.91e-71 228
MS.gene073229.t1 MTR_2g015590 44.322 273 143 5 28 293 29 299 2.44e-67 216
MS.gene073229.t1 MTR_3g466190 66.867 166 36 3 58 223 7 153 3.17e-65 207
MS.gene073229.t1 MTR_3g466190 79.487 78 16 0 294 371 152 229 4.63e-38 136
MS.gene073229.t1 MTR_8g028160 33.598 378 217 15 5 361 10 374 1.57e-51 176
MS.gene073229.t1 MTR_7g087190 32.718 379 211 14 18 371 31 390 1.93e-51 176
MS.gene073229.t1 MTR_7g116870 33.889 360 202 13 28 369 31 372 2.04e-49 171
MS.gene073229.t1 MTR_1g030340 33.249 397 208 15 4 371 18 386 6.49e-48 167
MS.gene073229.t1 MTR_1g030220 33.613 357 202 11 28 364 38 379 2.15e-47 166
MS.gene073229.t1 MTR_7g111780 33.140 344 199 13 30 363 36 358 2.51e-47 165
MS.gene073229.t1 MTR_1g030268 34.358 358 196 14 28 364 38 377 2.12e-46 163
MS.gene073229.t1 MTR_7g113860 33.058 363 195 15 26 361 25 366 2.85e-46 162
MS.gene073229.t1 MTR_8g089805 32.033 359 206 12 28 363 38 381 8.67e-46 161
MS.gene073229.t1 MTR_7g113860 31.148 366 210 14 20 361 25 372 1.62e-45 160
MS.gene073229.t1 MTR_1g030230 33.696 368 201 14 20 363 22 370 1.54e-44 158
MS.gene073229.t1 MTR_7g033165 31.856 361 200 11 28 362 31 371 2.91e-43 154
MS.gene073229.t1 MTR_7g033155 32.383 386 194 15 22 363 30 392 9.10e-43 154
MS.gene073229.t1 MTR_7g033150 31.746 378 206 14 20 366 25 381 3.47e-42 152
MS.gene073229.t1 MTR_6g007090 32.394 355 214 11 20 361 29 370 1.32e-41 150
MS.gene073229.t1 MTR_1g030275 34.349 361 190 16 28 363 37 375 1.33e-40 147
MS.gene073229.t1 MTR_1g082390 31.092 357 207 15 20 354 21 360 3.49e-39 143
MS.gene073229.t1 MTR_6g007095 31.088 386 230 13 1 367 7 375 3.63e-39 148
MS.gene073229.t1 MTR_6g007095 27.577 359 228 12 18 363 351 690 2.80e-28 116
MS.gene073229.t1 MTR_8g038680 30.141 355 211 14 28 361 26 364 5.46e-37 137
MS.gene073229.t1 MTR_1g030268 33.692 279 159 10 28 293 38 303 3.48e-34 129
MS.gene073229.t1 MTR_7g111780 32.707 266 158 10 111 363 2 259 3.57e-34 127
MS.gene073229.t1 MTR_8g022810 31.686 344 182 17 29 350 40 352 1.27e-33 128
MS.gene073229.t1 MTR_4g056160 29.042 334 212 9 30 354 27 344 1.26e-31 122
MS.gene073229.t1 MTR_4g056280 29.651 344 215 10 19 354 20 344 4.16e-31 121
MS.gene073229.t1 MTR_8g031390 28.824 340 211 14 25 356 32 348 8.67e-31 120
MS.gene073229.t1 MTR_6g007100 30.899 356 200 15 28 367 31 356 1.17e-30 120
MS.gene073229.t1 MTR_2g033930 30.060 336 206 11 30 356 32 347 1.64e-30 120
MS.gene073229.t1 MTR_1g030265 31.629 313 175 13 81 371 53 348 1.76e-30 119
MS.gene073229.t1 MTR_3g052490 30.214 374 218 14 3 362 12 356 3.11e-30 119
MS.gene073229.t1 MTR_8g031430 29.255 376 223 17 4 363 14 362 3.89e-30 119
MS.gene073229.t1 MTR_8g031420 27.632 380 233 14 2 363 5 360 8.63e-30 118
MS.gene073229.t1 MTR_7g033165 32.090 268 154 7 28 279 31 286 3.07e-29 115
MS.gene073229.t1 MTR_1g025680 29.674 337 205 12 30 355 34 349 4.59e-29 117
MS.gene073229.t1 MTR_4g122200 29.282 362 219 13 20 369 27 363 4.64e-29 116
MS.gene073229.t1 MTR_1g025720 29.641 334 196 12 28 347 35 343 1.64e-28 114
MS.gene073229.t1 MTR_7g113860 28.990 307 178 13 79 361 8 298 4.97e-28 112
MS.gene073229.t1 MTR_1g025780 28.614 339 204 14 30 355 41 354 5.03e-28 113
MS.gene073229.t1 MTR_1g025700 30.205 341 197 13 30 355 50 364 7.59e-28 112
MS.gene073229.t1 MTR_8g014910 29.080 337 206 13 30 354 32 347 7.65e-28 112
MS.gene073229.t1 MTR_3g098270 29.360 344 208 12 28 357 32 354 1.34e-27 112
MS.gene073229.t1 MTR_3g005650 27.485 342 215 12 30 361 30 348 1.67e-27 111
MS.gene073229.t1 MTR_2g015080 30.030 333 198 15 34 349 42 356 4.99e-27 110
MS.gene073229.t1 MTR_8g089805 28.094 299 184 10 86 363 25 313 6.66e-27 109
MS.gene073229.t1 MTR_8g031400 28.902 346 204 14 25 356 32 349 1.71e-26 108
MS.gene073229.t1 MTR_2g100620 27.761 335 213 12 30 354 31 346 2.60e-26 108
MS.gene073229.t1 MTR_8g031390 29.333 300 185 13 25 320 32 308 5.15e-26 106
MS.gene073229.t1 MTR_5g078210 27.300 337 209 11 34 358 29 341 6.29e-26 107
MS.gene073229.t1 MTR_3g052480 29.769 346 206 13 30 360 33 356 1.17e-25 106
MS.gene073229.t1 MTR_5g009100 28.152 341 209 14 32 359 48 365 1.61e-25 106
MS.gene073229.t1 MTR_3g052580 29.191 346 210 13 30 362 28 351 2.11e-25 106
MS.gene073229.t1 MTR_8g012540 29.909 331 189 15 28 334 26 337 2.86e-25 105
MS.gene073229.t1 MTR_1g025760 29.290 338 205 12 30 355 80 395 2.88e-25 106
MS.gene073229.t1 MTR_8g079050 29.457 387 215 19 3 362 11 366 3.70e-25 105
MS.gene073229.t1 MTR_3g052580 29.191 346 210 13 30 362 27 350 3.86e-25 105
MS.gene073229.t1 MTR_2g033920 28.696 345 203 12 29 356 34 352 3.91e-25 105
MS.gene073229.t1 MTR_4g087985 28.080 349 213 13 29 356 35 366 1.04e-24 103
MS.gene073229.t1 MTR_3g082830 27.300 337 221 10 30 359 38 357 1.22e-24 103
MS.gene073229.t1 MTR_5g022630 28.406 345 217 11 16 349 29 354 1.39e-24 103
MS.gene073229.t1 MTR_4g035353 24.719 356 236 10 18 361 19 354 2.27e-24 102
MS.gene073229.t1 MTR_5g084750 28.242 347 205 13 30 359 30 349 4.08e-24 102
MS.gene073229.t1 MTR_3g464730 28.142 366 229 16 1 355 2 344 4.95e-24 101
MS.gene073229.t1 MTR_5g084770 29.310 348 207 13 21 354 21 343 8.10e-24 101
MS.gene073229.t1 MTR_3g114090 29.651 344 204 16 26 355 32 351 4.67e-23 99.4
MS.gene073229.t1 MTR_5g074270 28.107 338 207 15 28 351 31 346 1.35e-22 98.2
MS.gene073229.t1 MTR_2g044100 27.350 351 219 15 23 359 36 364 1.36e-22 98.6
MS.gene073229.t1 MTR_7g116510 29.155 343 212 15 29 360 24 346 2.04e-22 97.4
MS.gene073229.t1 MTR_5g022640 26.331 357 231 10 9 355 25 359 2.21e-22 97.4
MS.gene073229.t1 MTR_5g078210 27.492 331 186 12 34 351 29 318 2.81e-22 96.7
MS.gene073229.t1 MTR_5g083040 26.225 347 220 14 30 360 32 358 2.93e-22 97.1
MS.gene073229.t1 MTR_5g084790 27.893 337 219 11 30 359 32 351 3.00e-22 97.1
MS.gene073229.t1 MTR_8g087890 26.506 332 209 13 32 351 33 341 5.07e-22 96.3
MS.gene073229.t1 MTR_1g025910 28.701 331 204 14 35 355 41 349 5.36e-22 96.3
MS.gene073229.t1 MTR_3g435540 27.624 362 211 14 32 367 25 361 5.54e-22 96.3
MS.gene073229.t1 MTR_1g024890 28.000 350 222 13 23 361 25 355 6.09e-22 96.3
MS.gene073229.t1 MTR_7g116520 26.934 349 215 15 29 361 33 357 1.25e-21 95.5
MS.gene073229.t1 MTR_1g060490 26.269 335 201 12 27 349 34 334 3.80e-21 93.6
MS.gene073229.t1 MTR_8g075200 26.720 378 231 15 1 355 2 356 1.40e-20 92.8
MS.gene073229.t1 MTR_0565s0010 24.324 333 216 14 32 351 34 343 2.51e-20 91.7
MS.gene073229.t1 MTR_0009s0250 26.646 319 198 11 30 335 33 328 4.13e-20 90.9
MS.gene073229.t1 MTR_4g108690 27.139 339 207 13 32 355 29 342 4.60e-20 90.9
MS.gene073229.t1 MTR_1g060500 26.149 348 201 16 27 353 37 349 1.58e-19 89.0
MS.gene073229.t1 MTR_1g079540 26.744 344 222 10 27 360 28 351 1.81e-19 89.0
MS.gene073229.t1 MTR_7g104220 26.567 335 201 14 31 353 43 344 2.98e-19 88.2
MS.gene073229.t1 MTR_8g022790 25.439 342 217 10 25 356 32 345 5.76e-19 87.4
MS.gene073229.t1 MTR_3g005660 25.758 330 218 12 32 351 38 350 6.02e-19 87.4
MS.gene073229.t1 MTR_3g114120 26.727 333 209 14 30 350 47 356 6.89e-19 87.4
MS.gene073229.t1 MTR_8g075220 24.802 379 242 13 1 355 1 360 9.44e-19 87.0
MS.gene073229.t1 MTR_5g093090 26.110 383 231 14 1 362 1 352 1.93e-18 85.9
MS.gene073229.t1 MTR_2g084585 25.000 336 220 11 30 354 30 344 3.92e-18 85.1
MS.gene073229.t1 MTR_7g116570 23.580 352 219 13 29 360 33 354 1.84e-17 83.2
MS.gene073229.t1 MTR_8g022810 33.014 209 107 10 29 221 40 231 3.15e-17 82.0
MS.gene073229.t1 MTR_4g019880 26.377 345 220 15 29 360 31 354 4.34e-17 82.0
MS.gene073229.t1 MTR_2g033920 27.338 278 173 9 29 293 34 295 6.37e-17 80.9
MS.gene073229.t1 MTR_1g079530 27.297 370 212 19 3 356 11 339 3.93e-16 79.3
MS.gene073229.t1 MTR_1g092750 23.780 328 211 11 31 349 41 338 7.42e-16 78.2
MS.gene073229.t1 MTR_3g023220 24.923 325 201 12 31 345 34 325 8.85e-16 78.2
MS.gene073229.t1 MTR_2g461580 23.615 343 214 11 30 359 31 338 1.00e-15 77.8
MS.gene073229.t1 MTR_3g021460 23.392 342 210 12 30 356 31 335 8.91e-15 75.1
MS.gene073229.t1 MTR_3g024510 23.795 332 218 14 32 351 40 348 1.56e-14 74.7
MS.gene073229.t1 MTR_1g092740 23.442 337 212 12 31 353 39 343 5.20e-14 72.8
MS.gene073229.t1 MTR_1g092760 23.565 331 207 12 31 349 40 336 1.03e-13 72.0
MS.gene073229.t1 MTR_8g074570 24.713 348 210 13 31 356 39 356 1.86e-13 71.2
MS.gene073229.t1 MTR_5g093090 25.402 311 197 10 1 295 1 292 3.42e-12 67.0
MS.gene073229.t1 MTR_8g087870 25.723 346 209 16 31 361 30 342 1.28e-11 65.5
MS.gene073229.t1 MTR_2g017875 27.108 332 189 19 31 344 35 331 1.67e-11 65.5
MS.gene073229.t1 MTR_6g049220 39.423 104 56 5 19 118 20 120 5.83e-11 61.2
MS.gene073229.t1 MTR_1g092690 22.059 340 217 13 21 349 45 347 7.03e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073229.t1 AT5G45910 44.063 379 186 9 1 362 1 370 1.17e-104 313
MS.gene073229.t1 AT1G28610 42.857 343 180 9 29 362 30 365 4.97e-88 271
MS.gene073229.t1 AT1G31550 40.379 369 203 11 3 361 8 369 6.05e-86 266
MS.gene073229.t1 AT1G28570 42.274 343 183 9 28 361 32 368 1.46e-83 259
MS.gene073229.t1 AT1G28670 40.805 348 186 10 28 363 33 372 2.15e-82 256
MS.gene073229.t1 AT1G28580 40.525 343 189 9 28 361 35 371 2.28e-82 256
MS.gene073229.t1 AT1G31550 39.837 369 202 12 3 361 8 366 4.69e-82 256
MS.gene073229.t1 AT1G28660 41.379 348 183 11 28 363 33 371 7.16e-82 255
MS.gene073229.t1 AT1G28640 40.058 347 189 9 28 363 33 371 8.35e-82 255
MS.gene073229.t1 AT1G28600 40.000 360 193 9 15 361 15 364 1.03e-81 255
MS.gene073229.t1 AT1G28590 40.173 346 192 9 28 364 34 373 1.35e-81 255
MS.gene073229.t1 AT2G27360 41.279 344 186 9 28 361 31 368 3.09e-81 254
MS.gene073229.t1 AT1G28660 41.379 348 182 12 28 363 33 370 4.90e-81 253
MS.gene073229.t1 AT1G28650 40.058 347 189 9 28 363 35 373 2.18e-79 248
MS.gene073229.t1 AT3G48460 37.429 350 188 11 27 361 35 368 1.20e-64 210
MS.gene073229.t1 AT1G28580 38.356 292 168 7 76 361 5 290 9.39e-64 206
MS.gene073229.t1 AT4G01130 32.865 356 202 12 28 361 32 372 1.13e-49 171
MS.gene073229.t1 AT1G28570 41.038 212 118 4 154 361 88 296 2.34e-49 169
MS.gene073229.t1 AT5G03980 33.721 344 176 9 15 353 14 310 5.67e-49 168
MS.gene073229.t1 AT1G28570 41.346 208 115 4 158 361 1 205 6.59e-49 165
MS.gene073229.t1 AT1G54790 32.597 362 198 14 26 361 28 369 4.18e-48 167
MS.gene073229.t1 AT1G56670 32.022 356 197 14 30 368 40 367 6.70e-46 161
MS.gene073229.t1 AT5G14450 31.793 368 206 14 28 371 39 385 1.99e-45 160
MS.gene073229.t1 AT1G67830 32.410 361 200 14 21 353 21 365 3.78e-45 159
MS.gene073229.t1 AT3G62280 31.519 349 209 11 21 361 31 357 3.56e-44 156
MS.gene073229.t1 AT3G05180 33.148 359 192 16 28 359 34 371 4.27e-44 157
MS.gene073229.t1 AT1G54790 30.978 368 208 14 20 361 21 368 1.27e-43 155
MS.gene073229.t1 AT1G09390 31.161 353 204 13 30 368 37 364 3.59e-42 151
MS.gene073229.t1 AT1G54790 29.487 390 211 15 20 361 21 394 1.38e-40 148
MS.gene073229.t1 AT3G26430 30.790 367 213 13 28 371 29 377 1.41e-39 144
MS.gene073229.t1 AT1G28600 39.801 201 103 6 15 204 15 208 1.66e-35 129
MS.gene073229.t1 AT4G01130 32.734 278 164 8 28 293 32 298 2.24e-34 129
MS.gene073229.t1 AT1G28610 42.222 180 87 7 29 198 30 202 3.02e-34 127
MS.gene073229.t1 AT1G71120 29.706 340 198 12 30 356 31 342 1.33e-31 122
MS.gene073229.t1 AT1G56670 30.824 279 157 10 30 293 40 297 6.61e-30 117
MS.gene073229.t1 AT3G27950 28.382 377 225 12 9 363 11 364 1.47e-29 117
MS.gene073229.t1 AT5G45950 29.730 333 202 12 30 354 40 348 1.88e-29 117
MS.gene073229.t1 AT2G40250 28.291 357 213 14 21 358 26 358 2.58e-29 116
MS.gene073229.t1 AT4G10950 27.566 341 218 12 26 356 66 387 4.49e-29 116
MS.gene073229.t1 AT1G75920 28.962 366 214 12 1 355 6 336 7.40e-29 115
MS.gene073229.t1 AT1G23500 26.184 359 230 12 5 356 9 339 1.23e-28 114
MS.gene073229.t1 AT1G73610 27.545 334 205 12 29 355 34 337 6.85e-28 112
MS.gene073229.t1 AT4G01130 28.523 298 179 11 86 361 1 286 8.66e-28 111
MS.gene073229.t1 AT1G06990 27.841 352 219 12 20 358 27 356 1.71e-27 111
MS.gene073229.t1 AT1G75880 28.443 334 214 13 30 355 52 368 3.58e-27 110
MS.gene073229.t1 AT1G71250 26.686 341 224 10 30 361 41 364 6.36e-27 110
MS.gene073229.t1 AT1G20120 27.586 348 211 12 28 358 76 399 6.62e-27 110
MS.gene073229.t1 AT1G53920 29.609 358 208 17 30 370 48 378 7.10e-27 110
MS.gene073229.t1 AT4G10950 27.273 341 215 13 26 356 66 383 1.99e-26 109
MS.gene073229.t1 AT5G63170 27.914 326 195 12 30 346 28 322 5.80e-26 107
MS.gene073229.t1 AT3G62280 29.391 279 173 8 21 293 31 291 9.28e-26 105
MS.gene073229.t1 AT1G20135 26.891 357 212 14 3 349 9 326 1.40e-25 105
MS.gene073229.t1 AT2G23540 28.684 380 221 15 1 356 18 371 1.85e-25 106
MS.gene073229.t1 AT1G75880 29.464 336 207 15 30 355 52 367 2.07e-25 106
MS.gene073229.t1 AT1G75890 28.657 335 212 14 30 355 47 363 2.14e-25 105
MS.gene073229.t1 AT2G03980 29.483 329 198 12 28 345 41 346 2.54e-25 105
MS.gene073229.t1 AT2G03980 29.483 329 198 12 28 345 41 346 2.54e-25 105
MS.gene073229.t1 AT2G03980 29.483 329 198 12 28 345 41 346 2.54e-25 105
MS.gene073229.t1 AT2G03980 29.483 329 198 12 28 345 41 346 2.54e-25 105
MS.gene073229.t1 AT1G75920 28.084 381 213 13 1 355 1 346 2.99e-25 105
MS.gene073229.t1 AT2G42990 28.182 330 209 12 30 350 28 338 3.39e-25 105
MS.gene073229.t1 AT5G40990 29.730 370 222 16 4 357 11 358 3.63e-25 105
MS.gene073229.t1 AT1G75890 28.657 335 212 14 30 355 76 392 5.88e-25 105
MS.gene073229.t1 AT5G08460 28.012 332 203 12 28 344 47 357 5.88e-25 105
MS.gene073229.t1 AT3G14225 28.818 347 207 15 30 357 37 362 6.62e-25 104
MS.gene073229.t1 AT5G15720 26.190 336 210 11 30 350 30 342 8.07e-25 104
MS.gene073229.t1 AT1G75910 26.039 361 224 13 9 355 5 336 1.32e-24 103
MS.gene073229.t1 AT1G75930 29.630 351 187 16 28 353 27 342 1.98e-24 102
MS.gene073229.t1 AT1G75920 29.355 310 179 11 57 355 28 308 2.46e-24 102
MS.gene073229.t1 AT1G20132 27.353 340 209 14 30 355 61 376 2.66e-24 103
MS.gene073229.t1 AT3G14225 28.530 347 204 15 30 357 37 358 3.70e-24 102
MS.gene073229.t1 AT1G53940 30.904 343 203 14 29 357 38 360 5.86e-24 102
MS.gene073229.t1 AT3G16370 26.648 349 227 11 20 359 22 350 6.81e-24 101
MS.gene073229.t1 AT5G45960 26.269 335 219 11 30 353 47 364 1.70e-23 100
MS.gene073229.t1 AT3G04290 28.529 340 217 10 29 360 28 349 3.18e-23 99.8
MS.gene073229.t1 AT2G04570 26.087 345 217 12 30 360 28 348 4.51e-23 99.4
MS.gene073229.t1 AT1G59406 28.443 334 210 13 30 355 30 342 5.52e-23 99.0
MS.gene073229.t1 AT1G59030 28.443 334 210 13 30 355 30 342 5.52e-23 99.0
MS.gene073229.t1 AT1G58725 28.443 334 210 13 30 355 30 342 5.52e-23 99.0
MS.gene073229.t1 AT1G75890 28.035 346 213 15 30 355 47 376 7.11e-23 99.0
MS.gene073229.t1 AT5G42170 27.761 335 209 12 30 354 50 361 8.18e-23 98.6
MS.gene073229.t1 AT5G33370 26.801 347 214 14 29 360 29 350 1.50e-22 97.8
MS.gene073229.t1 AT4G26790 26.409 337 220 11 28 355 27 344 3.47e-22 96.7
MS.gene073229.t1 AT4G26790 26.409 337 220 11 28 355 27 344 3.47e-22 96.7
MS.gene073229.t1 AT2G30310 28.691 359 224 17 5 350 7 346 5.17e-22 96.3
MS.gene073229.t1 AT5G03820 25.737 373 231 17 1 354 4 349 1.18e-21 95.1
MS.gene073229.t1 AT3G09930 26.844 339 211 11 21 349 30 341 1.38e-21 95.1
MS.gene073229.t1 AT3G09930 26.844 339 211 11 21 349 30 341 1.38e-21 95.1
MS.gene073229.t1 AT5G22810 27.747 364 233 15 1 354 8 351 1.66e-21 94.7
MS.gene073229.t1 AT4G28780 27.697 343 216 15 29 360 30 351 1.80e-21 94.7
MS.gene073229.t1 AT1G29670 26.220 328 214 11 32 351 34 341 1.81e-21 94.7
MS.gene073229.t1 AT5G03820 25.469 373 232 16 1 354 32 377 2.83e-21 94.7
MS.gene073229.t1 AT2G31540 28.531 354 223 15 18 358 22 358 3.07e-21 94.0
MS.gene073229.t1 AT3G50400 27.807 374 225 15 3 356 10 358 6.28e-21 93.6
MS.gene073229.t1 AT1G29670 26.524 328 213 11 32 351 102 409 7.00e-21 94.0
MS.gene073229.t1 AT5G37690 25.225 333 211 12 34 353 31 338 2.07e-20 91.7
MS.gene073229.t1 AT1G58430 26.488 336 219 13 28 353 33 350 2.16e-20 91.7
MS.gene073229.t1 AT2G19010 28.571 343 197 16 32 361 32 339 2.26e-20 91.7
MS.gene073229.t1 AT1G53990 26.415 371 232 15 1 357 6 349 2.95e-20 91.3
MS.gene073229.t1 AT1G74460 26.099 364 227 11 3 355 6 338 3.34e-20 91.3
MS.gene073229.t1 AT2G19010 28.571 343 197 16 32 361 62 369 3.65e-20 91.3
MS.gene073229.t1 AT5G18430 25.575 348 219 13 29 360 27 350 3.68e-20 90.9
MS.gene073229.t1 AT1G54000 26.765 340 202 14 27 353 33 338 4.17e-20 91.3
MS.gene073229.t1 AT1G75900 26.727 333 217 13 30 354 43 356 6.01e-20 90.5
MS.gene073229.t1 AT1G58520 27.434 339 200 12 30 355 30 335 7.55e-20 89.7
MS.gene073229.t1 AT1G58525 27.434 339 200 12 30 355 30 335 7.55e-20 89.7
MS.gene073229.t1 AT1G54020 25.562 356 218 15 6 350 8 327 9.25e-20 90.1
MS.gene073229.t1 AT1G29660 26.126 333 209 16 32 351 34 342 9.34e-20 90.1
MS.gene073229.t1 AT1G20130 25.731 342 219 11 30 355 204 526 1.55e-19 90.5
MS.gene073229.t1 AT5G15720 25.806 279 176 9 30 293 30 292 2.60e-19 87.8
MS.gene073229.t1 AT1G20130 25.731 342 219 11 30 355 184 506 2.84e-19 89.7
MS.gene073229.t1 AT5G03610 24.269 342 219 10 25 355 38 350 3.40e-19 88.2
MS.gene073229.t1 AT1G54010 27.027 333 196 15 26 345 32 330 7.07e-19 87.8
MS.gene073229.t1 AT3G53100 25.000 336 220 13 30 354 29 343 1.02e-18 86.7
MS.gene073229.t1 AT5G41890 26.087 368 230 12 11 356 12 359 1.75e-18 86.3
MS.gene073229.t1 AT2G24560 26.197 355 233 14 21 364 24 360 4.24e-18 85.1
MS.gene073229.t1 AT2G30220 27.095 358 230 15 5 350 7 345 4.51e-18 85.1
MS.gene073229.t1 AT1G75920 26.575 365 193 13 1 355 6 305 4.90e-18 84.3
MS.gene073229.t1 AT1G33811 25.364 343 228 13 31 361 35 361 8.09e-18 84.3
MS.gene073229.t1 AT2G19060 27.378 347 198 17 32 359 32 343 8.97e-18 84.0
MS.gene073229.t1 AT3G14820 26.786 336 210 12 30 354 32 342 1.01e-17 84.0
MS.gene073229.t1 AT5G55050 27.920 351 212 15 30 362 39 366 6.72e-17 81.6
MS.gene073229.t1 AT1G53940 31.273 275 164 11 29 293 38 297 2.41e-16 79.3
MS.gene073229.t1 AT5G03600 23.512 336 211 11 24 349 8 307 2.97e-16 79.3
MS.gene073229.t1 AT5G03600 22.951 366 229 12 1 349 13 342 3.13e-16 79.7
MS.gene073229.t1 AT3G14210 26.316 342 205 16 26 353 32 340 6.53e-16 79.0
MS.gene073229.t1 AT2G19050 24.412 340 215 11 32 359 33 342 1.48e-15 77.4
MS.gene073229.t1 AT5G37690 24.471 331 208 13 34 353 31 330 1.87e-15 77.0
MS.gene073229.t1 AT2G36325 24.773 331 215 11 31 354 48 351 3.10e-15 76.6
MS.gene073229.t1 AT5G45670 23.952 334 216 14 32 351 31 340 3.23e-14 73.6
MS.gene073229.t1 AT5G33370 25.357 280 176 11 29 293 29 290 5.29e-13 69.7
MS.gene073229.t1 AT2G31550 28.019 207 128 8 161 358 23 217 8.12e-13 67.8
MS.gene073229.t1 AT2G24560 27.778 288 180 13 21 294 24 297 8.54e-13 68.9
MS.gene073229.t1 AT3G43550 27.076 277 169 10 30 293 30 286 1.64e-12 67.8
MS.gene073229.t1 AT2G04020 29.439 214 132 10 28 232 41 244 2.75e-12 66.6
MS.gene073229.t1 AT2G04020 30.000 210 128 10 28 228 41 240 7.69e-12 66.2
MS.gene073229.t1 AT4G16230 26.923 234 147 8 1 221 3 225 9.76e-12 65.1

Find 60 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCAAAACTAATAAAT+TGG 0.141859 4.3:+54919064 MS.gene073229:CDS
AAAGAAGACTATGATGAATT+TGG 0.241383 4.3:+54918675 MS.gene073229:CDS
GTGATCAAATGCAGCATTTC+CGG 0.268623 4.3:-54917640 None:intergenic
CATTAAATGTGCAATTTGAT+TGG 0.321915 4.3:+54918114 MS.gene073229:CDS
TGCACATTTAATGATTCCTT+TGG 0.373985 4.3:-54918104 None:intergenic
AGAGTCACCGAAGTTGAATA+TGG 0.389848 4.3:-54917607 None:intergenic
ACGAGAGATAGTTCCCTTGA+TGG 0.390493 4.3:+54918367 MS.gene073229:CDS
TTAATTGTAGCTGAGGCATA+TGG 0.396651 4.3:+54917948 MS.gene073229:intron
ATGAAGATCTTCGTTCTGTT+TGG 0.399945 4.3:+54917519 MS.gene073229:CDS
GACATCAAGTGCAGTTGAAC+CGG 0.404703 4.3:-54918048 None:intergenic
CAATACTGATCATGATGATA+TGG 0.409129 4.3:-54919009 None:intergenic
TATTTGCTTATAAGCGGCTT+CGG 0.415948 4.3:-54919103 None:intergenic
TTGAAGTATGTTGAACCATA+AGG 0.422999 4.3:-54917687 None:intergenic
TCCTTCAAAACTAATAAATT+GGG 0.433608 4.3:+54919065 MS.gene073229:CDS
CGACTCATCATAGATTTCAT+AGG 0.433635 4.3:+54917738 MS.gene073229:CDS
GCGGTAGAGCTAGTGGTTCC+AGG 0.437517 4.3:+54918597 MS.gene073229:CDS
TCAGAGCAAACTGTTGTATT+CGG 0.437942 4.3:-54919042 None:intergenic
ATTTGATCACCTCAAAGAAA+TGG 0.440475 4.3:+54917653 MS.gene073229:CDS
TTGTTTATTGTGGGAGAGAT+TGG 0.448762 4.3:+54918299 MS.gene073229:CDS
TTTGATTGATTCAACCATCA+AGG 0.454594 4.3:-54918381 None:intergenic
CCATCTGGACGCATGTCAAA+TGG 0.462850 4.3:+54917714 MS.gene073229:CDS
AAACAGAACGAAGATCTTCA+TGG 0.465847 4.3:-54917517 None:intergenic
CACCCCATTGGAAAGTTACC+TGG 0.468103 4.3:-54918615 None:intergenic
GTTCCAGGTAACTTTCCAAT+GGG 0.469863 4.3:+54918612 MS.gene073229:CDS
TATCAAGCACCACAACAGTA+TGG 0.472277 4.3:+54918831 MS.gene073229:CDS
TGTCAGGCTTTAATTGAAGA+AGG 0.476299 4.3:+54918573 MS.gene073229:intron
TAAGCTATCTTGAAAGGAGC+AGG 0.481547 4.3:-54919171 None:intergenic
CATATCATCATGATCAGTAT+TGG 0.482301 4.3:+54919010 MS.gene073229:CDS
TTTAGAGAAGGATATGCAAA+AGG 0.485906 4.3:-54919147 None:intergenic
AATATACTATCTTAGCTTGA+GGG 0.487430 4.3:-54918779 None:intergenic
ACATACTTCAAACATCCATC+TGG 0.494108 4.3:+54917699 MS.gene073229:CDS
GACTTATGTAAAAGCAAAGA+AGG 0.499168 4.3:+54918155 MS.gene073229:CDS
GCTTATAAGCAAATAGCTAA+AGG 0.500430 4.3:+54919111 MS.gene073229:CDS
GGAGTTAATTTCGCTTATGC+CGG 0.502383 4.3:+54918029 MS.gene073229:CDS
AAAGCATGTTGTGGAGGAAG+TGG 0.510426 4.3:+54918985 MS.gene073229:CDS
TAATTGTAGCTGAGGCATAT+GGG 0.522458 4.3:+54917949 MS.gene073229:intron
CAACTCTAAGCTATCTTGAA+AGG 0.524346 4.3:-54919177 None:intergenic
TTTAGCTATTTGCTTATAAG+CGG 0.529705 4.3:-54919109 None:intergenic
TTGATTGATTCAACCATCAA+GGG 0.530384 4.3:-54918380 None:intergenic
CCATTTGACATGCGTCCAGA+TGG 0.541884 4.3:-54917714 None:intergenic
TGGTGCTTGATATAAACGTC+TGG 0.541930 4.3:-54918820 None:intergenic
GGTTCCAGGTAACTTTCCAA+TGG 0.543176 4.3:+54918611 MS.gene073229:CDS
AATATGGCTTCATACGGTAG+AGG 0.557506 4.3:-54917591 None:intergenic
TTTATTGTGGGAGAGATTGG+TGG 0.559776 4.3:+54918302 MS.gene073229:CDS
TTGGTGATATTCTTATAGGC+CGG 0.575246 4.3:-54917984 None:intergenic
ATAGCTAAAGGTTTAATCGA+AGG 0.579347 4.3:+54919123 MS.gene073229:CDS
TCAAAACTAATAAATTGGGA+TGG 0.581957 4.3:+54919069 MS.gene073229:CDS
GGTGACTCTACAAGTGATAC+CGG 0.585156 4.3:+54917621 MS.gene073229:CDS
AGAAGGAGCGGTAGAGCTAG+TGG 0.586129 4.3:+54918590 MS.gene073229:CDS
AAATATACTATCTTAGCTTG+AGG 0.588022 4.3:-54918780 None:intergenic
ATTTGTATAACATACATTGG+TGG 0.593190 4.3:-54918408 None:intergenic
GGCTTTAATTGAAGAAGGAG+CGG 0.599772 4.3:+54918578 MS.gene073229:intron
TAGTGGAGTCACTGCACCAA+AGG 0.599833 4.3:+54918088 MS.gene073229:CDS
CATCATGATCAGTATTGGTG+TGG 0.600970 4.3:+54919015 MS.gene073229:CDS
ATGTCAGTATTACACCCCAT+TGG 0.600994 4.3:-54918627 None:intergenic
AAGTTGAATATGGCTTCATA+CGG 0.613834 4.3:-54917597 None:intergenic
TATGAAGCCATATTCAACTT+CGG 0.629345 4.3:+54917600 MS.gene073229:CDS
CTCCACACACCATACTGTTG+TGG 0.629875 4.3:-54918840 None:intergenic
TTCCAGGTAACTTTCCAATG+GGG 0.661819 4.3:+54918613 MS.gene073229:CDS
TAAGCGGCTTCGGTAAAATG+TGG 0.667134 4.3:-54919093 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATTTTGTTTAAGTTAT+AGG + chr4.3:54918492-54918511 MS.gene073229:intron 10.0%
!! AAAACAATGAAAATTTAACA+AGG - chr4.3:54918880-54918899 None:intergenic 15.0%
!! TTTATTTAATTATGTTTGTC+AGG + chr4.3:54918557-54918576 MS.gene073229:intron 15.0%
!!! CTAAAATAATCTATTTTATG+AGG + chr4.3:54917851-54917870 MS.gene073229:intron 15.0%
!!! TTATTTTTGTGTGATATAAT+TGG + chr4.3:54918200-54918219 MS.gene073229:intron 15.0%
!! AAAAACTCATTGTTTATTGT+GGG + chr4.3:54918290-54918309 MS.gene073229:CDS 20.0%
!! AAGATTTGTATAACATACAT+TGG - chr4.3:54918414-54918433 None:intergenic 20.0%
!! AATGTACATAAATTAGTGAA+TGG - chr4.3:54918926-54918945 None:intergenic 20.0%
!! AGGTATTAGTGAATAAATAA+TGG + chr4.3:54918512-54918531 MS.gene073229:intron 20.0%
!! ATCCTTCAAAACTAATAAAT+TGG + chr4.3:54919064-54919083 MS.gene073229:CDS 20.0%
!! ATGGAAAAATTAATTCCTTA+TGG + chr4.3:54917672-54917691 MS.gene073229:CDS 20.0%
!! ATGTACATAAATTAGTGAAT+GGG - chr4.3:54918925-54918944 None:intergenic 20.0%
!! TCCTTCAAAACTAATAAATT+GGG + chr4.3:54919065-54919084 MS.gene073229:CDS 20.0%
!! TTTATGTACATTAATGATGT+AGG + chr4.3:54918934-54918953 MS.gene073229:intron 20.0%
!!! AAATATTTTAGTGGTATTAG+TGG + chr4.3:54918071-54918090 MS.gene073229:CDS 20.0%
!!! AACAAAACAAAAGTATTGTT+AGG - chr4.3:54918241-54918260 None:intergenic 20.0%
!!! ATAGATTATTTTAGAGTTCT+TGG - chr4.3:54917845-54917864 None:intergenic 20.0%
!!! TTAATTTTTCCATTTCTTTG+AGG - chr4.3:54917665-54917684 None:intergenic 20.0%
! AAAATAACATGCAAGGATTT+AGG - chr4.3:54918187-54918206 None:intergenic 25.0%
! AAAGAAGACTATGATGAATT+TGG + chr4.3:54918675-54918694 MS.gene073229:CDS 25.0%
! ATTTGTATAACATACATTGG+TGG - chr4.3:54918411-54918430 None:intergenic 25.0%
! CAAAAACTCATTGTTTATTG+TGG + chr4.3:54918289-54918308 MS.gene073229:CDS 25.0%
! CATTAAATGTGCAATTTGAT+TGG + chr4.3:54918114-54918133 MS.gene073229:CDS 25.0%
! TAGTGAATAAATAATGGTCT+TGG + chr4.3:54918518-54918537 MS.gene073229:intron 25.0%
! TCAAAACTAATAAATTGGGA+TGG + chr4.3:54919069-54919088 MS.gene073229:CDS 25.0%
! TTTAGCTATTTGCTTATAAG+CGG - chr4.3:54919112-54919131 None:intergenic 25.0%
!! AAATATACTATCTTAGCTTG+AGG - chr4.3:54918783-54918802 None:intergenic 25.0%
!! AAGCTAGTGAAATTTTCAAT+CGG - chr4.3:54917919-54917938 None:intergenic 25.0%
!! AATATACTATCTTAGCTTGA+GGG - chr4.3:54918782-54918801 None:intergenic 25.0%
!!! CTTGATGTCAAATATTTTAG+TGG + chr4.3:54918062-54918081 MS.gene073229:CDS 25.0%
!!! GATTTTGGTGATATTCTTAT+AGG - chr4.3:54917991-54918010 None:intergenic 25.0%
!!! TCCCAATTTATTAGTTTTGA+AGG - chr4.3:54919069-54919088 None:intergenic 25.0%
!!! TTCTTTGCTTTTACATAAGT+CGG - chr4.3:54918156-54918175 None:intergenic 25.0%
!!! TTTCTGTTTTATTGTCTCTA+TGG - chr4.3:54918757-54918776 None:intergenic 25.0%
AAGTTGAATATGGCTTCATA+CGG - chr4.3:54917600-54917619 None:intergenic 30.0%
AATCCCAGATGCTATAAAAA+AGG + chr4.3:54918007-54918026 MS.gene073229:CDS 30.0%
ATAGCTAAAGGTTTAATCGA+AGG + chr4.3:54919123-54919142 MS.gene073229:CDS 30.0%
ATCCCAGATGCTATAAAAAA+GGG + chr4.3:54918008-54918027 MS.gene073229:CDS 30.0%
ATTTGATCACCTCAAAGAAA+TGG + chr4.3:54917653-54917672 MS.gene073229:CDS 30.0%
CAATACTGATCATGATGATA+TGG - chr4.3:54919012-54919031 None:intergenic 30.0%
CATATCATCATGATCAGTAT+TGG + chr4.3:54919010-54919029 MS.gene073229:CDS 30.0%
GACTTATGTAAAAGCAAAGA+AGG + chr4.3:54918155-54918174 MS.gene073229:CDS 30.0%
GCTTATAAGCAAATAGCTAA+AGG + chr4.3:54919111-54919130 MS.gene073229:CDS 30.0%
TATGAAGCCATATTCAACTT+CGG + chr4.3:54917600-54917619 MS.gene073229:CDS 30.0%
TCACACAAAAATAACATGCA+AGG - chr4.3:54918194-54918213 None:intergenic 30.0%
TGCACATTTAATGATTCCTT+TGG - chr4.3:54918107-54918126 None:intergenic 30.0%
TTGAAGTATGTTGAACCATA+AGG - chr4.3:54917690-54917709 None:intergenic 30.0%
TTTAGAGAAGGATATGCAAA+AGG - chr4.3:54919150-54919169 None:intergenic 30.0%
! TGTAGGTTTTACTTCTGATA+AGG + chr4.3:54918951-54918970 MS.gene073229:intron 30.0%
! TTGATTGATTCAACCATCAA+GGG - chr4.3:54918383-54918402 None:intergenic 30.0%
! TTTGATTGATTCAACCATCA+AGG - chr4.3:54918384-54918403 None:intergenic 30.0%
!! TCTTTGCTTTTACATAAGTC+GGG - chr4.3:54918155-54918174 None:intergenic 30.0%
!! TTTTATAGCATCTGGGATTT+TGG - chr4.3:54918006-54918025 None:intergenic 30.0%
!!! TCTCATTTTAATTGTAGCTG+AGG + chr4.3:54917941-54917960 MS.gene073229:intron 30.0%
ACATACTTCAAACATCCATC+TGG + chr4.3:54917699-54917718 MS.gene073229:CDS 35.0%
ATGAAGATCTTCGTTCTGTT+TGG + chr4.3:54917519-54917538 MS.gene073229:CDS 35.0%
CGACTCATCATAGATTTCAT+AGG + chr4.3:54917738-54917757 MS.gene073229:CDS 35.0%
TAATTGTAGCTGAGGCATAT+GGG + chr4.3:54917949-54917968 MS.gene073229:intron 35.0%
TATTTGCTTATAAGCGGCTT+CGG - chr4.3:54919106-54919125 None:intergenic 35.0%
TCAGAGCAAACTGTTGTATT+CGG - chr4.3:54919045-54919064 None:intergenic 35.0%
TTAATTGTAGCTGAGGCATA+TGG + chr4.3:54917948-54917967 MS.gene073229:intron 35.0%
TTCTTATAGGCCGGTAAAAA+TGG - chr4.3:54917978-54917997 None:intergenic 35.0%
TTGTTTATTGTGGGAGAGAT+TGG + chr4.3:54918299-54918318 MS.gene073229:CDS 35.0%
! ACTTTTGCATGTGGCTTTTT+TGG + chr4.3:54917546-54917565 MS.gene073229:CDS 35.0%
! TGTCAGGCTTTAATTGAAGA+AGG + chr4.3:54918573-54918592 MS.gene073229:intron 35.0%
! TTGGTGATATTCTTATAGGC+CGG - chr4.3:54917987-54918006 None:intergenic 35.0%
! TTTTACTTCTGATAAGGTCG+AGG + chr4.3:54918957-54918976 MS.gene073229:CDS 35.0%
!! TTTGGTATCACTTTTGCATG+TGG + chr4.3:54917537-54917556 MS.gene073229:CDS 35.0%
!!! ACTCCCTTTTTTATAGCATC+TGG - chr4.3:54918014-54918033 None:intergenic 35.0%
!!! ATATGGGTTGCCATTTTTAC+CGG + chr4.3:54917965-54917984 MS.gene073229:CDS 35.0%
!!! CTCCCTTTTTTATAGCATCT+GGG - chr4.3:54918013-54918032 None:intergenic 35.0%
AATATGGCTTCATACGGTAG+AGG - chr4.3:54917594-54917613 None:intergenic 40.0%
AGAGTCACCGAAGTTGAATA+TGG - chr4.3:54917610-54917629 None:intergenic 40.0%
ATGTCAGTATTACACCCCAT+TGG - chr4.3:54918630-54918649 None:intergenic 40.0%
GGAGTTAATTTCGCTTATGC+CGG + chr4.3:54918029-54918048 MS.gene073229:CDS 40.0%
GTGATCAAATGCAGCATTTC+CGG - chr4.3:54917643-54917662 None:intergenic 40.0%
GTTCCAGGTAACTTTCCAAT+GGG + chr4.3:54918612-54918631 MS.gene073229:CDS 40.0%
TAAGCTATCTTGAAAGGAGC+AGG - chr4.3:54919174-54919193 None:intergenic 40.0%
TATCAAGCACCACAACAGTA+TGG + chr4.3:54918831-54918850 MS.gene073229:CDS 40.0%
TGGTGCTTGATATAAACGTC+TGG - chr4.3:54918823-54918842 None:intergenic 40.0%
TTCCAGGTAACTTTCCAATG+GGG + chr4.3:54918613-54918632 MS.gene073229:CDS 40.0%
TTTATTGTGGGAGAGATTGG+TGG + chr4.3:54918302-54918321 MS.gene073229:CDS 40.0%
! GGCTTTAATTGAAGAAGGAG+CGG + chr4.3:54918578-54918597 MS.gene073229:intron 40.0%
!! CATCATGATCAGTATTGGTG+TGG + chr4.3:54919015-54919034 MS.gene073229:CDS 40.0%
!!! AAAGGAGCAGGTTTTAGAGA+AGG - chr4.3:54919162-54919181 None:intergenic 40.0%
!!! GAGGTTTTGAAAGCATGTTG+TGG + chr4.3:54918976-54918995 MS.gene073229:CDS 40.0%
!!! GTTTTGAAAGCATGTTGTGG+AGG + chr4.3:54918979-54918998 MS.gene073229:CDS 40.0%
AAAGCATGTTGTGGAGGAAG+TGG + chr4.3:54918985-54919004 MS.gene073229:CDS 45.0%
ACGAGAGATAGTTCCCTTGA+TGG + chr4.3:54918367-54918386 MS.gene073229:CDS 45.0%
GACATCAAGTGCAGTTGAAC+CGG - chr4.3:54918051-54918070 None:intergenic 45.0%
GGTGACTCTACAAGTGATAC+CGG + chr4.3:54917621-54917640 MS.gene073229:CDS 45.0%
GGTTCCAGGTAACTTTCCAA+TGG + chr4.3:54918611-54918630 MS.gene073229:CDS 45.0%
TAAGCGGCTTCGGTAAAATG+TGG - chr4.3:54919096-54919115 None:intergenic 45.0%
!!! ATTAAAATCAATAATTTTTA+AGG + chr4.3:54917882-54917901 MS.gene073229:intron 5.0%
CACCACAACAGTATGGTGTG+TGG + chr4.3:54918838-54918857 MS.gene073229:intron 50.0%
CACCCCATTGGAAAGTTACC+TGG - chr4.3:54918618-54918637 None:intergenic 50.0%
CCATCTGGACGCATGTCAAA+TGG + chr4.3:54917714-54917733 MS.gene073229:CDS 50.0%
CCATTTGACATGCGTCCAGA+TGG - chr4.3:54917717-54917736 None:intergenic 50.0%
CTCCACACACCATACTGTTG+TGG - chr4.3:54918843-54918862 None:intergenic 50.0%
TAGTGGAGTCACTGCACCAA+AGG + chr4.3:54918088-54918107 MS.gene073229:CDS 50.0%
AGAAGGAGCGGTAGAGCTAG+TGG + chr4.3:54918590-54918609 MS.gene073229:CDS 55.0%
GCGGTAGAGCTAGTGGTTCC+AGG + chr4.3:54918597-54918616 MS.gene073229:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 54917519 54919194 54917519 ID=MS.gene073229
chr4.3 mRNA 54917519 54919194 54917519 ID=MS.gene073229.t1;Parent=MS.gene073229
chr4.3 exon 54917519 54917759 54917519 ID=MS.gene073229.t1.exon1;Parent=MS.gene073229.t1
chr4.3 CDS 54917519 54917759 54917519 ID=cds.MS.gene073229.t1;Parent=MS.gene073229.t1
chr4.3 exon 54917958 54918176 54917958 ID=MS.gene073229.t1.exon2;Parent=MS.gene073229.t1
chr4.3 CDS 54917958 54918176 54917958 ID=cds.MS.gene073229.t1;Parent=MS.gene073229.t1
chr4.3 exon 54918273 54918415 54918273 ID=MS.gene073229.t1.exon3;Parent=MS.gene073229.t1
chr4.3 CDS 54918273 54918415 54918273 ID=cds.MS.gene073229.t1;Parent=MS.gene073229.t1
chr4.3 exon 54918579 54918852 54918579 ID=MS.gene073229.t1.exon4;Parent=MS.gene073229.t1
chr4.3 CDS 54918579 54918852 54918579 ID=cds.MS.gene073229.t1;Parent=MS.gene073229.t1
chr4.3 exon 54918956 54919194 54918956 ID=MS.gene073229.t1.exon5;Parent=MS.gene073229.t1
chr4.3 CDS 54918956 54919194 54918956 ID=cds.MS.gene073229.t1;Parent=MS.gene073229.t1
Gene Sequence

>MS.gene073229

ATGAAGATCTTCGTTCTGTTTGGTATCACTTTTGCATGTGGCTTTTTTGGAAACTTTATTTCAAATGCTAATCCTCTACCGTATGAAGCCATATTCAACTTCGGTGACTCTACAAGTGATACCGGAAATGCTGCATTTGATCACCTCAAAGAAATGGAAAAATTAATTCCTTATGGTTCAACATACTTCAAACATCCATCTGGACGCATGTCAAATGGACGACTCATCATAGATTTCATAGGTACTTTTACACATACTTTTTTTCTTAAATAAATTCTTTTTGTATTAATGAAATAGTAAATAACAAAAAAAAAAAAATAATACCAAGAACTCTAAAATAATCTATTTTATGAGGTCGTTATAATTAAAATCAATAATTTTTAAGGTTGATACATTTCCGATTGAAAATTTCACTAGCTTATTCTCATTTTAATTGTAGCTGAGGCATATGGGTTGCCATTTTTACCGGCCTATAAGAATATCACCAAAATCCCAGATGCTATAAAAAAGGGAGTTAATTTCGCTTATGCCGGTTCAACTGCACTTGATGTCAAATATTTTAGTGGTATTAGTGGAGTCACTGCACCAAAGGAATCATTAAATGTGCAATTTGATTGGTTTAAGAAGCTAAAACCCGACTTATGTAAAAGCAAAGAAGGTTTTGTCCTAAATCCTTGCATGTTATTTTTGTGTGATATAATTGGTTTATCATCTATATGCCTAACAATACTTTTGTTTTGTTATGAGTTCACAGAATGTGACAGCTTCTTCAAAAACTCATTGTTTATTGTGGGAGAGATTGGTGGAAATGATATTTTTTATCATCTTTCTAAAACTATTACTGAACTACGAGAGATAGTTCCCTTGATGGTTGAATCAATCAAAAATACCACCAATGTATGTTATACAAATCTTAAGTAATTAAATGTTTACATATTAGCAAAAAATAAATAACTGTTGACTTCAATTGTAGAATAATTTTGTTTAAGTTATAGGTATTAGTGAATAAATAATGGTCTTGGAAAAATGTAATAGAGATTTATTTAATTATGTTTGTCAGGCTTTAATTGAAGAAGGAGCGGTAGAGCTAGTGGTTCCAGGTAACTTTCCAATGGGGTGTAATACTGACATATTGTCAAAAAAGATTAGTCAGAAGAAAGAAGACTATGATGAATTTGGATGTTTGACAGCTTACAACACTCTCATCGAATACTTTAATGAGCAGCTAAAAAAATCCATAGAGACAATAAAACAGAAACACCCTCAAGCTAAGATAGTATATTTTGACTATTACAACGATGCCAGACGTTTATATCAAGCACCACAACAGTATGGTGTGTGGAGCAATTATTTTCTATCCTTGTTAAATTTTCATTGTTTTATTCTTGTCAAATTTGTTTGATCCCATTCACTAATTTATGTACATTAATGATGTAGGTTTTACTTCTGATAAGGTCGAGGTTTTGAAAGCATGTTGTGGAGGAAGTGGACCATATCATCATGATCAGTATTGGTGTGGAACGCCGAATACAACAGTTTGCTCTGATCCTTCAAAACTAATAAATTGGGATGGACCACATTTTACCGAAGCCGCTTATAAGCAAATAGCTAAAGGTTTAATCGAAGGACCTTTTGCATATCCTTCTCTAAAACCTGCTCCTTTCAAGATAGCTTAG
Protein sequence

>MS.gene073229.t1

MKIFVLFGITFACGFFGNFISNANPLPYEAIFNFGDSTSDTGNAAFDHLKEMEKLIPYGSTYFKHPSGRMSNGRLIIDFIAEAYGLPFLPAYKNITKIPDAIKKGVNFAYAGSTALDVKYFSGISGVTAPKESLNVQFDWFKKLKPDLCKSKEECDSFFKNSLFIVGEIGGNDIFYHLSKTITELREIVPLMVESIKNTTNALIEEGAVELVVPGNFPMGCNTDILSKKISQKKEDYDEFGCLTAYNTLIEYFNEQLKKSIETIKQKHPQAKIVYFDYYNDARRLYQAPQQYGFTSDKVEVLKACCGGSGPYHHDQYWCGTPNTTVCSDPSKLINWDGPHFTEAAYKQIAKGLIEGPFAYPSLKPAPFKIA