Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073495.t1 | XP_024638897.1 | 98.8 | 255 | 3 | 0 | 39 | 293 | 40 | 294 | 1.10E-128 | 469.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073495.t1 | Q93VV0 | 69.3 | 261 | 80 | 0 | 33 | 293 | 25 | 285 | 8.4e-93 | 341.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073495.t1 | A0A072UT43 | 98.8 | 255 | 3 | 0 | 39 | 293 | 40 | 294 | 8.0e-129 | 469.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054884 | MS.gene073495 | 0.803889 | 2.81E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073495.t1 | MTR_4g021795 | 98.639 | 294 | 3 | 1 | 1 | 293 | 1 | 294 | 0.0 | 594 |
| MS.gene073495.t1 | MTR_1g094610 | 48.889 | 270 | 129 | 4 | 17 | 284 | 11 | 273 | 2.04e-87 | 262 |
| MS.gene073495.t1 | MTR_4g023760 | 31.799 | 239 | 137 | 5 | 44 | 272 | 54 | 276 | 9.19e-30 | 114 |
| MS.gene073495.t1 | MTR_7g118050 | 32.589 | 224 | 118 | 7 | 68 | 272 | 76 | 285 | 9.48e-30 | 114 |
| MS.gene073495.t1 | MTR_7g088350 | 30.242 | 248 | 119 | 10 | 45 | 262 | 84 | 307 | 3.43e-22 | 96.3 |
| MS.gene073495.t1 | MTR_7g118050 | 34.694 | 147 | 74 | 4 | 68 | 195 | 76 | 219 | 2.18e-21 | 90.5 |
| MS.gene073495.t1 | MTR_1g098390 | 31.500 | 200 | 109 | 7 | 51 | 227 | 67 | 261 | 3.59e-21 | 93.2 |
| MS.gene073495.t1 | MTR_6g038020 | 31.527 | 203 | 107 | 7 | 51 | 227 | 65 | 261 | 9.75e-21 | 91.7 |
| MS.gene073495.t1 | MTR_6g038020 | 31.527 | 203 | 107 | 7 | 51 | 227 | 68 | 264 | 9.94e-21 | 91.7 |
| MS.gene073495.t1 | MTR_6g033315 | 29.167 | 192 | 107 | 5 | 78 | 258 | 123 | 296 | 6.12e-19 | 86.7 |
| MS.gene073495.t1 | MTR_7g088360 | 28.261 | 230 | 126 | 8 | 77 | 293 | 139 | 342 | 1.23e-18 | 85.5 |
| MS.gene073495.t1 | MTR_1g036390 | 36.719 | 128 | 59 | 3 | 50 | 169 | 45 | 158 | 1.21e-17 | 81.3 |
| MS.gene073495.t1 | MTR_3g098840 | 27.189 | 217 | 111 | 6 | 75 | 262 | 103 | 301 | 1.46e-17 | 82.8 |
| MS.gene073495.t1 | MTR_1g036390 | 36.719 | 128 | 59 | 3 | 50 | 169 | 71 | 184 | 2.24e-17 | 81.3 |
| MS.gene073495.t1 | MTR_1g036390 | 36.719 | 128 | 59 | 3 | 50 | 169 | 102 | 215 | 2.39e-17 | 81.3 |
| MS.gene073495.t1 | MTR_7g114080 | 28.631 | 241 | 126 | 8 | 22 | 237 | 86 | 305 | 3.16e-16 | 78.6 |
| MS.gene073495.t1 | MTR_4g074600 | 32.824 | 131 | 66 | 3 | 47 | 169 | 22 | 138 | 4.50e-16 | 76.6 |
| MS.gene073495.t1 | MTR_4g074600 | 31.013 | 158 | 86 | 4 | 20 | 169 | 92 | 234 | 6.50e-16 | 77.4 |
| MS.gene073495.t1 | MTR_5g023230 | 29.189 | 185 | 111 | 5 | 107 | 285 | 150 | 320 | 8.30e-16 | 76.6 |
| MS.gene073495.t1 | MTR_5g023230 | 29.189 | 185 | 111 | 5 | 107 | 285 | 170 | 340 | 8.32e-16 | 77.0 |
| MS.gene073495.t1 | MTR_7g114080 | 26.829 | 246 | 133 | 8 | 22 | 237 | 86 | 314 | 3.99e-15 | 75.5 |
| MS.gene073495.t1 | MTR_7g114080 | 34.259 | 108 | 59 | 2 | 65 | 168 | 124 | 223 | 6.11e-15 | 74.3 |
| MS.gene073495.t1 | MTR_4g116160 | 26.275 | 255 | 156 | 8 | 22 | 258 | 120 | 360 | 8.70e-15 | 74.7 |
| MS.gene073495.t1 | MTR_4g116160 | 26.275 | 255 | 156 | 8 | 22 | 258 | 293 | 533 | 1.64e-14 | 73.9 |
| MS.gene073495.t1 | MTR_7g114080 | 32.692 | 104 | 66 | 1 | 65 | 168 | 124 | 223 | 3.45e-14 | 72.0 |
| MS.gene073495.t1 | MTR_4g076120 | 30.065 | 153 | 95 | 4 | 101 | 241 | 177 | 329 | 9.34e-14 | 72.0 |
| MS.gene073495.t1 | MTR_7g083480 | 27.984 | 243 | 135 | 9 | 38 | 258 | 72 | 296 | 1.22e-13 | 71.2 |
| MS.gene073495.t1 | MTR_4g076120 | 30.065 | 153 | 95 | 4 | 101 | 241 | 103 | 255 | 1.38e-13 | 71.2 |
| MS.gene073495.t1 | MTR_4g116160 | 32.558 | 129 | 71 | 4 | 44 | 164 | 315 | 435 | 1.66e-13 | 70.9 |
| MS.gene073495.t1 | MTR_5g023230 | 37.879 | 66 | 41 | 0 | 107 | 172 | 170 | 235 | 3.78e-13 | 68.2 |
| MS.gene073495.t1 | MTR_4g092760 | 46.154 | 65 | 35 | 0 | 105 | 169 | 363 | 427 | 4.15e-13 | 69.7 |
| MS.gene073495.t1 | MTR_4g092760 | 46.154 | 65 | 35 | 0 | 105 | 169 | 274 | 338 | 5.03e-13 | 69.3 |
| MS.gene073495.t1 | MTR_1g085980 | 28.025 | 157 | 97 | 3 | 86 | 230 | 141 | 293 | 6.44e-13 | 68.9 |
| MS.gene073495.t1 | MTR_4g082560 | 29.670 | 182 | 109 | 6 | 106 | 268 | 180 | 361 | 2.13e-12 | 67.8 |
| MS.gene073495.t1 | MTR_1g112830 | 26.562 | 256 | 163 | 7 | 12 | 258 | 371 | 610 | 7.78e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073495.t1 | AT3G09320 | 68.683 | 281 | 88 | 0 | 13 | 293 | 5 | 285 | 3.45e-141 | 399 |
| MS.gene073495.t1 | AT5G04270 | 51.575 | 254 | 117 | 2 | 16 | 269 | 7 | 254 | 2.54e-83 | 252 |
| MS.gene073495.t1 | AT4G22750 | 34.667 | 225 | 120 | 6 | 57 | 268 | 60 | 270 | 7.58e-32 | 120 |
| MS.gene073495.t1 | AT4G00840 | 29.930 | 284 | 168 | 8 | 22 | 285 | 17 | 289 | 4.25e-31 | 118 |
| MS.gene073495.t1 | AT3G60800 | 32.917 | 240 | 133 | 7 | 44 | 268 | 54 | 280 | 7.13e-30 | 115 |
| MS.gene073495.t1 | AT4G00840 | 42.593 | 108 | 59 | 2 | 44 | 148 | 47 | 154 | 8.45e-24 | 97.1 |
| MS.gene073495.t1 | AT5G50020 | 33.333 | 201 | 104 | 7 | 51 | 227 | 66 | 260 | 1.48e-22 | 97.1 |
| MS.gene073495.t1 | AT5G50020 | 33.500 | 200 | 103 | 7 | 51 | 226 | 96 | 289 | 1.56e-22 | 97.1 |
| MS.gene073495.t1 | AT3G56930 | 31.579 | 190 | 102 | 6 | 77 | 258 | 123 | 292 | 1.56e-21 | 94.4 |
| MS.gene073495.t1 | AT4G24630 | 29.167 | 240 | 137 | 7 | 12 | 224 | 24 | 257 | 6.01e-20 | 89.4 |
| MS.gene073495.t1 | AT5G41060 | 27.660 | 235 | 122 | 10 | 51 | 258 | 13 | 226 | 1.36e-19 | 87.8 |
| MS.gene073495.t1 | AT5G41060 | 27.660 | 235 | 122 | 10 | 51 | 258 | 13 | 226 | 1.36e-19 | 87.8 |
| MS.gene073495.t1 | AT5G41060 | 25.188 | 266 | 151 | 10 | 20 | 258 | 34 | 278 | 1.39e-19 | 88.2 |
| MS.gene073495.t1 | AT5G41060 | 25.188 | 266 | 151 | 10 | 20 | 258 | 49 | 293 | 1.55e-19 | 88.2 |
| MS.gene073495.t1 | AT5G05070 | 26.568 | 271 | 152 | 9 | 20 | 262 | 66 | 317 | 5.31e-19 | 86.7 |
| MS.gene073495.t1 | AT5G50020 | 32.338 | 201 | 99 | 8 | 51 | 227 | 66 | 253 | 3.79e-18 | 84.3 |
| MS.gene073495.t1 | AT3G26935 | 29.949 | 197 | 109 | 7 | 54 | 227 | 83 | 273 | 2.11e-17 | 82.4 |
| MS.gene073495.t1 | AT3G48760 | 28.111 | 217 | 109 | 9 | 75 | 262 | 110 | 308 | 2.37e-17 | 82.4 |
| MS.gene073495.t1 | AT3G56920 | 28.163 | 245 | 129 | 9 | 45 | 262 | 64 | 288 | 3.47e-17 | 80.9 |
| MS.gene073495.t1 | AT2G40990 | 29.032 | 186 | 101 | 7 | 77 | 254 | 137 | 299 | 6.89e-17 | 80.5 |
| MS.gene073495.t1 | AT3G51390 | 28.302 | 212 | 139 | 4 | 76 | 287 | 133 | 331 | 7.08e-16 | 77.0 |
| MS.gene073495.t1 | AT3G04970 | 31.604 | 212 | 101 | 9 | 54 | 237 | 32 | 227 | 7.44e-16 | 76.6 |
| MS.gene073495.t1 | AT2G14255 | 29.344 | 259 | 154 | 10 | 16 | 258 | 275 | 520 | 7.52e-16 | 77.8 |
| MS.gene073495.t1 | AT3G51390 | 28.302 | 212 | 139 | 4 | 76 | 287 | 138 | 336 | 7.65e-16 | 77.0 |
| MS.gene073495.t1 | AT3G18620 | 36.538 | 104 | 55 | 2 | 106 | 198 | 149 | 252 | 1.81e-15 | 75.9 |
| MS.gene073495.t1 | AT3G04970 | 31.604 | 212 | 101 | 9 | 54 | 237 | 119 | 314 | 1.94e-15 | 76.3 |
| MS.gene073495.t1 | AT3G04970 | 31.959 | 194 | 98 | 8 | 54 | 224 | 119 | 301 | 1.06e-14 | 73.6 |
| MS.gene073495.t1 | AT3G56930 | 32.000 | 150 | 63 | 4 | 77 | 226 | 123 | 233 | 1.90e-14 | 73.6 |
| MS.gene073495.t1 | AT5G20350 | 29.493 | 217 | 130 | 7 | 59 | 258 | 318 | 528 | 2.03e-13 | 70.9 |
| MS.gene073495.t1 | AT1G69420 | 31.579 | 152 | 92 | 3 | 106 | 245 | 164 | 315 | 5.65e-13 | 69.3 |
| MS.gene073495.t1 | AT1G69420 | 31.579 | 152 | 92 | 3 | 106 | 245 | 164 | 315 | 5.65e-13 | 69.3 |
| MS.gene073495.t1 | AT3G22180 | 27.152 | 151 | 98 | 3 | 106 | 244 | 173 | 323 | 3.56e-11 | 63.9 |
| MS.gene073495.t1 | AT4G15080 | 29.586 | 169 | 96 | 5 | 95 | 244 | 161 | 325 | 5.07e-11 | 63.5 |
| MS.gene073495.t1 | AT4G15080 | 29.586 | 169 | 96 | 5 | 95 | 244 | 161 | 325 | 5.07e-11 | 63.5 |
Find 65 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGTTTCTGGGCTCTTAC+TGG | 0.218961 | 4.1:-76288916 | MS.gene073495:CDS |
| CGGCTTCGCGTTCTCGTTTC+CGG | 0.221292 | 4.1:-76292057 | MS.gene073495:CDS |
| CACAGCCAGCTAAGGATATT+TGG | 0.270678 | 4.1:+76287857 | None:intergenic |
| GCTTATAGTGAGAGCACTTT+TGG | 0.276496 | 4.1:+76289532 | None:intergenic |
| ACACATAATGATATAGTTAA+AGG | 0.276995 | 4.1:+76288891 | None:intergenic |
| GATGAAATGACGACGGTTAC+CGG | 0.290148 | 4.1:+76292038 | None:intergenic |
| CTGCTTCGCTTTCTCGATCA+TGG | 0.338698 | 4.1:+76292094 | None:intergenic |
| GTCTTCATTGATAGATGGTT+TGG | 0.345555 | 4.1:-76291984 | MS.gene073495:CDS |
| ACCTAAGTCCAGAACCTATA+TGG | 0.351878 | 4.1:+76287822 | None:intergenic |
| TTGCGTTTGATTTCATGAAT+AGG | 0.366006 | 4.1:+76291816 | None:intergenic |
| GTAAGGATCACCATTGCATT+TGG | 0.377803 | 4.1:-76289382 | MS.gene073495:intron |
| ACGACGGCGTTTATGATTCC+AGG | 0.391763 | 4.1:+76291948 | None:intergenic |
| TCTTCGTCTTCATTGATAGA+TGG | 0.393150 | 4.1:-76291989 | MS.gene073495:CDS |
| CTCCCCGTGCACATCATTGC+CGG | 0.397317 | 4.1:-76289509 | MS.gene073495:CDS |
| ACAGCAAGCCATATAGGTTC+TGG | 0.412789 | 4.1:-76287830 | MS.gene073495:CDS |
| AAGCAGCAACGCGGCGGCGG+CGG | 0.424579 | 4.1:-76292077 | MS.gene073495:CDS |
| TCCCCGTGCACATCATTGCC+GGG | 0.424676 | 4.1:-76289508 | MS.gene073495:CDS |
| TCATACGGGCCAAGGTCATA+TGG | 0.430628 | 4.1:+76288671 | None:intergenic |
| TGGGACCAAATATCCTTAGC+TGG | 0.447899 | 4.1:-76287862 | MS.gene073495:CDS |
| GCCATATAGGTTCTGGACTT+AGG | 0.455513 | 4.1:-76287823 | MS.gene073495:CDS |
| GCGAAGCAGCAACGCGGCGG+CGG | 0.458234 | 4.1:-76292080 | MS.gene073495:CDS |
| CACATAATGATATAGTTAAA+GGG | 0.461586 | 4.1:+76288892 | None:intergenic |
| ATAGTATTATCTTCAACATC+AGG | 0.471334 | 4.1:+76291840 | None:intergenic |
| TGGCCAACAGCAAGCCATAT+AGG | 0.481073 | 4.1:-76287836 | MS.gene073495:CDS |
| ATGAAGGAGTGAGAGCTTTG+TGG | 0.484159 | 4.1:-76288727 | MS.gene073495:CDS |
| TAGTGAGATCATAGACGGTT+CGG | 0.494795 | 4.1:+76287798 | None:intergenic |
| TTGTGTTGGCAGTATTATGA+AGG | 0.498389 | 4.1:-76288743 | MS.gene073495:intron |
| AGCTTTGTGGCTTCAAGAGA+AGG | 0.500113 | 4.1:-76288714 | MS.gene073495:CDS |
| GTTGGTAGTCTAGCTTATGA+TGG | 0.500150 | 4.1:-76289067 | MS.gene073495:CDS |
| GTGAGCAGGGTGGAGATTTG+AGG | 0.510803 | 4.1:-76289560 | MS.gene073495:intron |
| ACCCCGGCAATGATGTGCAC+GGG | 0.519740 | 4.1:+76289506 | None:intergenic |
| TCAAATTCTCATACGGGCCA+AGG | 0.521925 | 4.1:+76288663 | None:intergenic |
| ACATAACAATACCACGATAG+AGG | 0.522922 | 4.1:-76288838 | MS.gene073495:intron |
| ACAGATGTCAAATTCTCATA+CGG | 0.523145 | 4.1:+76288656 | None:intergenic |
| CTGTTGGCCACAGCCAGCTA+AGG | 0.531280 | 4.1:+76287849 | None:intergenic |
| GATCCGTGAAAATAGCTAAA+CGG | 0.540850 | 4.1:+76291889 | None:intergenic |
| CAAATATCCTTAGCTGGCTG+TGG | 0.549591 | 4.1:-76287856 | MS.gene073495:CDS |
| TGTGGCTTCAAGAGAAGGGT+GGG | 0.551105 | 4.1:-76288709 | MS.gene073495:CDS |
| GATTGCCTGCATTTACTCCA+TGG | 0.552216 | 4.1:-76289297 | MS.gene073495:intron |
| AAAGCGAAGCAGCAACGCGG+CGG | 0.560120 | 4.1:-76292083 | MS.gene073495:CDS |
| TATAAACATCCATATGACCT+TGG | 0.564631 | 4.1:-76288680 | MS.gene073495:CDS |
| ACCGTCTATGATCTCACTAA+AGG | 0.568962 | 4.1:-76287794 | MS.gene073495:CDS |
| TAAAAGATGTGTTCTACGAA+TGG | 0.569266 | 4.1:-76289481 | MS.gene073495:intron |
| TATTCATGAAATCAAACGCA+AGG | 0.586968 | 4.1:-76291814 | MS.gene073495:intron |
| AACCCCGGCAATGATGTGCA+CGG | 0.588357 | 4.1:+76289505 | None:intergenic |
| GCTTTGTGGCTTCAAGAGAA+GGG | 0.589103 | 4.1:-76288713 | MS.gene073495:CDS |
| GAACCTATATGGCTTGCTGT+TGG | 0.590025 | 4.1:+76287833 | None:intergenic |
| TACGTAGACGGAACCCGACC+CGG | 0.590081 | 4.1:+76291867 | None:intergenic |
| ACCTTTAGTGAGATCATAGA+CGG | 0.591266 | 4.1:+76287793 | None:intergenic |
| CCCCGTGCACATCATTGCCG+GGG | 0.592790 | 4.1:-76289507 | MS.gene073495:CDS |
| CAGATGTCAAATTCTCATAC+GGG | 0.593509 | 4.1:+76288657 | None:intergenic |
| ATTTGGATAAATAACTGTGT+CGG | 0.599774 | 4.1:-76289365 | MS.gene073495:CDS |
| AACACACATGAAAGCGATGA+CGG | 0.601760 | 4.1:+76291920 | None:intergenic |
| AGTTATTTATCCAAATGCAA+TGG | 0.610149 | 4.1:+76289372 | None:intergenic |
| TTGTGGCTTCAAGAGAAGGG+TGG | 0.610405 | 4.1:-76288710 | MS.gene073495:CDS |
| ACATACCATGGAGTAAATGC+AGG | 0.612415 | 4.1:+76289292 | None:intergenic |
| CCCCGGCAATGATGTGCACG+GGG | 0.613681 | 4.1:+76289507 | None:intergenic |
| ACATCAGGCGTATACGTAGA+CGG | 0.639986 | 4.1:+76291855 | None:intergenic |
| GCATGTCATAACCTCTATCG+TGG | 0.648544 | 4.1:+76288827 | None:intergenic |
| CGGCAATGATGTGCACGGGG+AGG | 0.663843 | 4.1:+76289510 | None:intergenic |
| ATCAATGAAGACGAAGACGG+TGG | 0.672230 | 4.1:+76291995 | None:intergenic |
| TCTATCAATGAAGACGAAGA+CGG | 0.675758 | 4.1:+76291992 | None:intergenic |
| GAGAAAGCGAAGCAGCAACG+CGG | 0.693256 | 4.1:-76292086 | MS.gene073495:CDS |
| AGCGATGACGGTGAAAACGA+CGG | 0.712056 | 4.1:+76291932 | None:intergenic |
| AGCGATTGATGAAATGACGA+CGG | 0.729992 | 4.1:+76292031 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAAATATTGTGTACT+AGG | + | chr4.1:76290061-76290080 | None:intergenic | 15.0% |
| !!! | ATCTTTTTTGAATAAACATT+TGG | - | chr4.1:76291386-76291405 | MS.gene073495:intron | 15.0% |
| !!! | ATTTTTTGCTTATTTAATTG+GGG | - | chr4.1:76288169-76288188 | MS.gene073495:intron | 15.0% |
| !!! | GATTTTTTGCTTATTTAATT+GGG | - | chr4.1:76288168-76288187 | MS.gene073495:intron | 15.0% |
| !!! | TTGTCTTTTTTGTTTTAATT+TGG | - | chr4.1:76288146-76288165 | MS.gene073495:intron | 15.0% |
| !! | AAAAAAAAACATCATGATAG+TGG | + | chr4.1:76288964-76288983 | None:intergenic | 20.0% |
| !! | AAAAAAAACATCATGATAGT+GGG | + | chr4.1:76288963-76288982 | None:intergenic | 20.0% |
| !! | AAAAAAGAAGTTGAAGAAAA+GGG | + | chr4.1:76291907-76291926 | None:intergenic | 20.0% |
| !! | AAAATTGTTTACTTTACTGA+AGG | + | chr4.1:76290903-76290922 | None:intergenic | 20.0% |
| !! | AAATTGTTTACTTTACTGAA+GGG | + | chr4.1:76290902-76290921 | None:intergenic | 20.0% |
| !! | AACAAGTAAAATTAATCCAA+TGG | - | chr4.1:76290129-76290148 | MS.gene073495:intron | 20.0% |
| !! | ACACATAATGATATAGTTAA+AGG | + | chr4.1:76290979-76290998 | None:intergenic | 20.0% |
| !! | ATACACAATCAAATGTTTAT+GGG | + | chr4.1:76290233-76290252 | None:intergenic | 20.0% |
| !! | ATGTAAAAAAATTACATCGT+TGG | + | chr4.1:76291690-76291709 | None:intergenic | 20.0% |
| !! | CACATAATGATATAGTTAAA+GGG | + | chr4.1:76290978-76290997 | None:intergenic | 20.0% |
| !! | GAAAATGATTTCAATATGTT+TGG | - | chr4.1:76289778-76289797 | MS.gene073495:intron | 20.0% |
| !! | TAAAAAAGAAGTTGAAGAAA+AGG | + | chr4.1:76291908-76291927 | None:intergenic | 20.0% |
| !! | TAAAATAAACAAACATACCA+TGG | + | chr4.1:76290590-76290609 | None:intergenic | 20.0% |
| !! | TCTACAATATTAAGAATTAG+AGG | + | chr4.1:76289040-76289059 | None:intergenic | 20.0% |
| !! | TTTCTTTATGCAAACATAAA+TGG | + | chr4.1:76291639-76291658 | None:intergenic | 20.0% |
| !! | TTTGCATTGTTATGAATATT+GGG | - | chr4.1:76288091-76288110 | MS.gene073495:intron | 20.0% |
| !!! | ATATCATTATGTGTTCTTTT+AGG | - | chr4.1:76290985-76291004 | MS.gene073495:intron | 20.0% |
| !!! | GGATTTTTTGCTTATTTAAT+TGG | - | chr4.1:76288167-76288186 | MS.gene073495:intron | 20.0% |
| !!! | TCAATCATTAGAATTTTCAA+TGG | - | chr4.1:76291878-76291897 | MS.gene073495:CDS | 20.0% |
| !!! | TGTTTTGTTTATTTTTTTGC+AGG | - | chr4.1:76291979-76291998 | MS.gene073495:CDS | 20.0% |
| !!! | TTTATTTTTTTGCAGGTTTT+GGG | - | chr4.1:76291986-76292005 | MS.gene073495:CDS | 20.0% |
| !!! | TTTTGCATTGTTATGAATAT+TGG | - | chr4.1:76288090-76288109 | MS.gene073495:intron | 20.0% |
| !!! | TTTTTCTTTCTTCTTTCATT+TGG | - | chr4.1:76291360-76291379 | MS.gene073495:intron | 20.0% |
| ! | ACTAGTTAAGGAATCAAATA+TGG | - | chr4.1:76289590-76289609 | MS.gene073495:intron | 25.0% |
| ! | AGACCATGAAAAATATCAAA+AGG | + | chr4.1:76290707-76290726 | None:intergenic | 25.0% |
| ! | AGATATGATTAATGATCCAT+TGG | - | chr4.1:76288392-76288411 | MS.gene073495:intron | 25.0% |
| ! | AGTTATTTATCCAAATGCAA+TGG | + | chr4.1:76290498-76290517 | None:intergenic | 25.0% |
| ! | ATACAAACACAACAAAAAGA+AGG | + | chr4.1:76289449-76289468 | None:intergenic | 25.0% |
| ! | ATAGTATTATCTTCAACATC+AGG | + | chr4.1:76288030-76288049 | None:intergenic | 25.0% |
| ! | ATGAGCATTAATTAGGAATA+TGG | + | chr4.1:76289902-76289921 | None:intergenic | 25.0% |
| ! | ATTTGGATAAATAACTGTGT+CGG | - | chr4.1:76290502-76290521 | MS.gene073495:intron | 25.0% |
| ! | CAATTATCACATCAATAAGA+TGG | + | chr4.1:76291527-76291546 | None:intergenic | 25.0% |
| ! | CTTATTGATGTGATAATTGA+CGG | - | chr4.1:76291528-76291547 | MS.gene073495:intron | 25.0% |
| ! | GATACACAATCAAATGTTTA+TGG | + | chr4.1:76290234-76290253 | None:intergenic | 25.0% |
| ! | TATGGTAAAACTTTCTTGAA+AGG | - | chr4.1:76289608-76289627 | MS.gene073495:intron | 25.0% |
| ! | TCATAGGTAATTAGGAATAT+GGG | + | chr4.1:76289737-76289756 | None:intergenic | 25.0% |
| ! | TGAGCATTAATTAGGAATAT+GGG | + | chr4.1:76289901-76289920 | None:intergenic | 25.0% |
| ! | TGATTTCGATTTACTCAATT+AGG | - | chr4.1:76291098-76291117 | MS.gene073495:intron | 25.0% |
| ! | TTCATCATGATCATATCATA+TGG | - | chr4.1:76291409-76291428 | MS.gene073495:intron | 25.0% |
| ! | TTCCAAAAAAAAAACATCAC+TGG | + | chr4.1:76290285-76290304 | None:intergenic | 25.0% |
| !! | AAACTAGTTAGCATTTTCTT+AGG | + | chr4.1:76289561-76289580 | None:intergenic | 25.0% |
| !! | CTTCCTTTTGATATTTTTCA+TGG | - | chr4.1:76290701-76290720 | MS.gene073495:intron | 25.0% |
| !!! | ATAGTAATGTGCTATTTGAT+TGG | + | chr4.1:76291719-76291738 | None:intergenic | 25.0% |
| !!! | CATCAATCAAGTTTTATCTT+GGG | - | chr4.1:76290425-76290444 | MS.gene073495:intron | 25.0% |
| !!! | CATGAAATAAACTTTTTTGC+AGG | - | chr4.1:76290930-76290949 | MS.gene073495:intron | 25.0% |
| !!! | GATTTTTAACTAAAACACGT+CGG | + | chr4.1:76288448-76288467 | None:intergenic | 25.0% |
| !!! | GTTTATTTTTTTGCAGGTTT+TGG | - | chr4.1:76291985-76292004 | MS.gene073495:CDS | 25.0% |
| !!! | TCATCAATCAAGTTTTATCT+TGG | - | chr4.1:76290424-76290443 | MS.gene073495:intron | 25.0% |
| !!! | TGACAAAAAGTGTTGTTTAT+TGG | - | chr4.1:76290460-76290479 | MS.gene073495:intron | 25.0% |
| !!! | TTCCAGTGATGTTTTTTTTT+TGG | - | chr4.1:76290280-76290299 | MS.gene073495:intron | 25.0% |
| !!! | TTCTTTTGTATTCTGAAATC+AGG | - | chr4.1:76291554-76291573 | MS.gene073495:intron | 25.0% |
| !!! | TTGTTTTTGTTGTTAATCTG+CGG | - | chr4.1:76288727-76288746 | MS.gene073495:CDS | 25.0% |
| !!! | TTTATGTGTGATTTGTTATG+TGG | - | chr4.1:76288575-76288594 | MS.gene073495:intron | 25.0% |
| AAAAGTAAAACCTTAGTCTG+TGG | + | chr4.1:76289854-76289873 | None:intergenic | 30.0% | |
| AAAATATTGTTGCGGTATAG+CGG | - | chr4.1:76289166-76289185 | MS.gene073495:intron | 30.0% | |
| AACACATTAGTCATACTCAT+AGG | + | chr4.1:76289753-76289772 | None:intergenic | 30.0% | |
| AACATAATTCAACTCAACTG+AGG | - | chr4.1:76291500-76291519 | MS.gene073495:intron | 30.0% | |
| AACGCTTTCAAATAATAGCT+AGG | + | chr4.1:76291479-76291498 | None:intergenic | 30.0% | |
| AACTGATCCAAAATAAACTG+AGG | - | chr4.1:76289269-76289288 | MS.gene073495:intron | 30.0% | |
| AAGGAAGAGAAAACTAAATC+AGG | + | chr4.1:76290688-76290707 | None:intergenic | 30.0% | |
| AAGTTCAATGAGAAAAAAGC+AGG | + | chr4.1:76291299-76291318 | None:intergenic | 30.0% | |
| ACAGATGTCAAATTCTCATA+CGG | + | chr4.1:76291214-76291233 | None:intergenic | 30.0% | |
| ACGTCGGAATTATTGAATAT+CGG | + | chr4.1:76288432-76288451 | None:intergenic | 30.0% | |
| ACTAGTGAAGGAAAACAAAA+AGG | + | chr4.1:76289689-76289708 | None:intergenic | 30.0% | |
| AGTCATACTCATAGGTAATT+AGG | + | chr4.1:76289745-76289764 | None:intergenic | 30.0% | |
| AGTTCAATGAGAAAAAAGCA+GGG | + | chr4.1:76291298-76291317 | None:intergenic | 30.0% | |
| ATACACGATGAAGACAAAAA+TGG | - | chr4.1:76290824-76290843 | MS.gene073495:intron | 30.0% | |
| CATTAAGCTCGTATAAAACT+TGG | + | chr4.1:76288223-76288242 | None:intergenic | 30.0% | |
| CGTATTGTTTCCTTAATCTT+CGG | + | chr4.1:76289212-76289231 | None:intergenic | 30.0% | |
| CTCATAGGTAATTAGGAATA+TGG | + | chr4.1:76289738-76289757 | None:intergenic | 30.0% | |
| CTCATTGAACTTCATTCATT+TGG | - | chr4.1:76291307-76291326 | MS.gene073495:intron | 30.0% | |
| GAATATGGGCTTAATTAACT+AGG | + | chr4.1:76289887-76289906 | None:intergenic | 30.0% | |
| GATACTATAATCAGATGTGA+AGG | - | chr4.1:76291796-76291815 | MS.gene073495:intron | 30.0% | |
| GTTGTGTTTGTATTTGAGAA+AGG | - | chr4.1:76289456-76289475 | MS.gene073495:intron | 30.0% | |
| TAAAAGATGTGTTCTACGAA+TGG | - | chr4.1:76290386-76290405 | MS.gene073495:intron | 30.0% | |
| TATAAACATCCATATGACCT+TGG | - | chr4.1:76291187-76291206 | MS.gene073495:intron | 30.0% | |
| TATGAGTATGACTAATGTGT+TGG | - | chr4.1:76289752-76289771 | MS.gene073495:intron | 30.0% | |
| TATTCATGAAATCAAACGCA+AGG | - | chr4.1:76288053-76288072 | MS.gene073495:intron | 30.0% | |
| TCCAAAATAAACTGAGGTAA+TGG | - | chr4.1:76289275-76289294 | MS.gene073495:intron | 30.0% | |
| TGAGTAAATCGAAATCATTC+TGG | + | chr4.1:76291095-76291114 | None:intergenic | 30.0% | |
| TGGAAAAATATCAGCTTCTA+GGG | + | chr4.1:76289834-76289853 | None:intergenic | 30.0% | |
| TGTTATATTAAGTGAGCCAT+TGG | + | chr4.1:76290148-76290167 | None:intergenic | 30.0% | |
| TTGTTTAGTAGTGACTGTAT+TGG | + | chr4.1:76289361-76289380 | None:intergenic | 30.0% | |
| ! | ACTTTGTAGGTTTTACTTGT+TGG | - | chr4.1:76290782-76290801 | MS.gene073495:intron | 30.0% |
| ! | CACTGGAAAGTTAATTTTCA+TGG | + | chr4.1:76290268-76290287 | None:intergenic | 30.0% |
| ! | CTATACCGCAACAATATTTT+GGG | + | chr4.1:76289166-76289185 | None:intergenic | 30.0% |
| ! | TATAAGTTGAGGGCATATTT+GGG | - | chr4.1:76289299-76289318 | MS.gene073495:CDS | 30.0% |
| ! | TATACCGCAACAATATTTTG+GGG | + | chr4.1:76289165-76289184 | None:intergenic | 30.0% |
| ! | TCAATGTTGCTTAACTTTGT+AGG | - | chr4.1:76290769-76290788 | MS.gene073495:intron | 30.0% |
| ! | TGATATTTTTCCACAGACTA+AGG | - | chr4.1:76289841-76289860 | MS.gene073495:intron | 30.0% |
| ! | TGTTAATGTAGTCTTGATCA+AGG | - | chr4.1:76288797-76288816 | MS.gene073495:intron | 30.0% |
| ! | TTGCGTTTGATTTCATGAAT+AGG | + | chr4.1:76288054-76288073 | None:intergenic | 30.0% |
| ! | TTTTCCTTTCTGCAATCATT+TGG | - | chr4.1:76291334-76291353 | MS.gene073495:intron | 30.0% |
| !! | AAGTTTTATCTTGGGCTTTT+TGG | - | chr4.1:76290433-76290452 | MS.gene073495:intron | 30.0% |
| !! | AGTGTTGTTTATTGGTTGTA+AGG | - | chr4.1:76290468-76290487 | MS.gene073495:intron | 30.0% |
| !! | CATTATGTGTTCTTTTAGGA+TGG | - | chr4.1:76290989-76291008 | MS.gene073495:intron | 30.0% |
| !! | TCAATATGTTTGGTTTGACT+GGG | - | chr4.1:76289788-76289807 | MS.gene073495:intron | 30.0% |
| !! | TTACCGTTTAGCTATTTTCA+CGG | - | chr4.1:76287975-76287994 | MS.gene073495:intron | 30.0% |
| !! | TTCAATATGTTTGGTTTGAC+TGG | - | chr4.1:76289787-76289806 | MS.gene073495:intron | 30.0% |
| !! | TTTGTTATGTGGTGAGTTTT+TGG | - | chr4.1:76288586-76288605 | MS.gene073495:intron | 30.0% |
| AAATATTGTTGCGGTATAGC+GGG | - | chr4.1:76289167-76289186 | MS.gene073495:intron | 35.0% | |
| ACATAACAATACCACGATAG+AGG | - | chr4.1:76291029-76291048 | MS.gene073495:intron | 35.0% | |
| ACCTTTAGTGAGATCATAGA+CGG | + | chr4.1:76292077-76292096 | None:intergenic | 35.0% | |
| ACTCAATTAGGAAGTTGTGT+TGG | - | chr4.1:76291110-76291129 | MS.gene073495:intron | 35.0% | |
| AGTAAAGATGACCTCTTTCA+AGG | + | chr4.1:76289968-76289987 | None:intergenic | 35.0% | |
| ATGACCAAATGATTGCAGAA+AGG | + | chr4.1:76291341-76291360 | None:intergenic | 35.0% | |
| ATTTGCGTGAATGAAATCTG+TGG | - | chr4.1:76290662-76290681 | MS.gene073495:intron | 35.0% | |
| CAGATGTCAAATTCTCATAC+GGG | + | chr4.1:76291213-76291232 | None:intergenic | 35.0% | |
| CCAGCATATGAGCATTAATT+AGG | + | chr4.1:76289909-76289928 | None:intergenic | 35.0% | |
| CCTAATTAATGCTCATATGC+TGG | - | chr4.1:76289906-76289925 | MS.gene073495:intron | 35.0% | |
| CTTAACCTATCCAGCTAAAA+GGG | + | chr4.1:76288763-76288782 | None:intergenic | 35.0% | |
| GATCCGTGAAAATAGCTAAA+CGG | + | chr4.1:76287981-76288000 | None:intergenic | 35.0% | |
| GCGGTTACTTCATAATTCTT+AGG | - | chr4.1:76288841-76288860 | MS.gene073495:CDS | 35.0% | |
| GGAAAAATATCAGCTTCTAG+GGG | + | chr4.1:76289833-76289852 | None:intergenic | 35.0% | |
| GGTCAATCAATCATAACCAA+TGG | + | chr4.1:76288411-76288430 | None:intergenic | 35.0% | |
| GTAAAGATGACCTCTTTCAA+GGG | + | chr4.1:76289967-76289986 | None:intergenic | 35.0% | |
| GTCTTCATTGATAGATGGTT+TGG | - | chr4.1:76287883-76287902 | MS.gene073495:intron | 35.0% | |
| GTGGAAAAATATCAGCTTCT+AGG | + | chr4.1:76289835-76289854 | None:intergenic | 35.0% | |
| TAGGAATATAACGCAACAGA+AGG | + | chr4.1:76289542-76289561 | None:intergenic | 35.0% | |
| TATCCATACCACATCAAATG+CGG | + | chr4.1:76290038-76290057 | None:intergenic | 35.0% | |
| TCTATCAATGAAGACGAAGA+CGG | + | chr4.1:76287878-76287897 | None:intergenic | 35.0% | |
| TCTTCGTCTTCATTGATAGA+TGG | - | chr4.1:76287878-76287897 | MS.gene073495:intron | 35.0% | |
| TGGATAGGTTAAGCAATAGT+AGG | - | chr4.1:76288770-76288789 | MS.gene073495:intron | 35.0% | |
| TTAATCTGCATGATCAACAG+TGG | + | chr4.1:76289420-76289439 | None:intergenic | 35.0% | |
| ! | AAAATGCTAACTAGTTTCCC+TGG | - | chr4.1:76289564-76289583 | MS.gene073495:intron | 35.0% |
| ! | AAATGCTAACTAGTTTCCCT+GGG | - | chr4.1:76289565-76289584 | MS.gene073495:intron | 35.0% |
| ! | AGGTAATGGCTATAAGTTGA+GGG | - | chr4.1:76289289-76289308 | MS.gene073495:intron | 35.0% |
| ! | ATAAGTTGAGGGCATATTTG+GGG | - | chr4.1:76289300-76289319 | MS.gene073495:CDS | 35.0% |
| ! | ATGTCATGTGTTGATGTGTT+TGG | - | chr4.1:76289516-76289535 | MS.gene073495:CDS | 35.0% |
| ! | CTATAAGTTGAGGGCATATT+TGG | - | chr4.1:76289298-76289317 | MS.gene073495:CDS | 35.0% |
| ! | GCCATTACCTCAGTTTATTT+TGG | + | chr4.1:76289279-76289298 | None:intergenic | 35.0% |
| ! | GCTATACCGCAACAATATTT+TGG | + | chr4.1:76289167-76289186 | None:intergenic | 35.0% |
| ! | TTGTGTTGGCAGTATTATGA+AGG | - | chr4.1:76291124-76291143 | MS.gene073495:intron | 35.0% |
| !! | AAAAACATCATGATAGTGGG+AGG | + | chr4.1:76288960-76288979 | None:intergenic | 35.0% |
| !! | ATACCGCAACAATATTTTGG+GGG | + | chr4.1:76289164-76289183 | None:intergenic | 35.0% |
| !! | GTAGTCTTGATCAAGGTTTT+GGG | - | chr4.1:76288804-76288823 | MS.gene073495:intron | 35.0% |
| !! | TGTAGTCTTGATCAAGGTTT+TGG | - | chr4.1:76288803-76288822 | MS.gene073495:intron | 35.0% |
| !! | TTTAGCTATTTTCACGGATC+CGG | - | chr4.1:76287981-76288000 | MS.gene073495:intron | 35.0% |
| !!! | ACTTTTTTGCAGGTTGTTTC+TGG | - | chr4.1:76290940-76290959 | MS.gene073495:intron | 35.0% |
| !!! | CTTTTTTGCAGGTTGTTTCT+GGG | - | chr4.1:76290941-76290960 | MS.gene073495:intron | 35.0% |
| !!! | TCATATGCTGGCTTTTAAAG+TGG | - | chr4.1:76289918-76289937 | MS.gene073495:intron | 35.0% |
| !!! | TTTTTGTTGTTAATCTGCGG+TGG | - | chr4.1:76288730-76288749 | MS.gene073495:CDS | 35.0% |
| !!! | TTTTTTTGGAACTGTGAGCA+GGG | - | chr4.1:76290294-76290313 | MS.gene073495:intron | 35.0% |
| !!! | TTTTTTTTGGAACTGTGAGC+AGG | - | chr4.1:76290293-76290312 | MS.gene073495:intron | 35.0% |
| AACACACATGAAAGCGATGA+CGG | + | chr4.1:76287950-76287969 | None:intergenic | 40.0% | |
| ACATACCATGGAGTAAATGC+AGG | + | chr4.1:76290578-76290597 | None:intergenic | 40.0% | |
| ACCGTCTATGATCTCACTAA+AGG | - | chr4.1:76292073-76292092 | MS.gene073495:CDS | 40.0% | |
| ACCTAAGTCCAGAACCTATA+TGG | + | chr4.1:76292048-76292067 | None:intergenic | 40.0% | |
| ACTAAACAAACGCAGCACAA+TGG | - | chr4.1:76289372-76289391 | MS.gene073495:CDS | 40.0% | |
| AGCGATTGATGAAATGACGA+CGG | + | chr4.1:76287839-76287858 | None:intergenic | 40.0% | |
| ATACTAACCCGCATTTGATG+TGG | - | chr4.1:76290027-76290046 | MS.gene073495:intron | 40.0% | |
| ATCCATACCACATCAAATGC+GGG | + | chr4.1:76290037-76290056 | None:intergenic | 40.0% | |
| ATGGTCTGTGCTAGATTTGA+TGG | - | chr4.1:76290720-76290739 | MS.gene073495:intron | 40.0% | |
| CAACCCCCAAAATATTGTTG+CGG | - | chr4.1:76289158-76289177 | MS.gene073495:intron | 40.0% | |
| CAATGAGAAAAAAGCAGGGT+GGG | + | chr4.1:76291294-76291313 | None:intergenic | 40.0% | |
| CACGATGAAGACAAAAATGG+CGG | - | chr4.1:76290827-76290846 | MS.gene073495:intron | 40.0% | |
| CTAAACAAACGCAGCACAAT+GGG | - | chr4.1:76289373-76289392 | MS.gene073495:CDS | 40.0% | |
| GACAATGTTGTATACGAGTC+TGG | - | chr4.1:76289994-76290013 | MS.gene073495:intron | 40.0% | |
| GCTGATCAGTGAAAAAGTCA+TGG | + | chr4.1:76291457-76291476 | None:intergenic | 40.0% | |
| GCTTAACCTATCCAGCTAAA+AGG | + | chr4.1:76288764-76288783 | None:intergenic | 40.0% | |
| GTAAGGATCACCATTGCATT+TGG | - | chr4.1:76290485-76290504 | MS.gene073495:intron | 40.0% | |
| GTGTAATTCTTGCGTTTCCT+AGG | - | chr4.1:76288988-76289007 | MS.gene073495:intron | 40.0% | |
| TAAACAAACGCAGCACAATG+GGG | - | chr4.1:76289374-76289393 | MS.gene073495:CDS | 40.0% | |
| TAGTGAGATCATAGACGGTT+CGG | + | chr4.1:76292072-76292091 | None:intergenic | 40.0% | |
| TCAATGAGAAAAAAGCAGGG+TGG | + | chr4.1:76291295-76291314 | None:intergenic | 40.0% | |
| TCATTCACGCAAATACAACG+TGG | + | chr4.1:76290656-76290675 | None:intergenic | 40.0% | |
| TGTATACGAGTCTGGCTATA+AGG | - | chr4.1:76290002-76290021 | MS.gene073495:intron | 40.0% | |
| TTACCGGAGTTTCATTGTAG+TGG | - | chr4.1:76289326-76289345 | MS.gene073495:CDS | 40.0% | |
| ! | AATGCTAACTAGTTTCCCTG+GGG | - | chr4.1:76289566-76289585 | MS.gene073495:intron | 40.0% |
| ! | GAACACATCTTTTACAACCC+CGG | + | chr4.1:76290380-76290399 | None:intergenic | 40.0% |
| ! | GAGGTAATGGCTATAAGTTG+AGG | - | chr4.1:76289288-76289307 | MS.gene073495:intron | 40.0% |
| ! | TTCCTTAATCTTCGGTGTAG+CGG | + | chr4.1:76289204-76289223 | None:intergenic | 40.0% |
| !! | AAAGTGGACTGTCGTATATG+CGG | - | chr4.1:76289934-76289953 | MS.gene073495:intron | 40.0% |
| !! | AGTGACTGTATTGGCTAGTA+TGG | + | chr4.1:76289352-76289371 | None:intergenic | 40.0% |
| !! | GGCATATTTGGGGTTTTTAC+CGG | - | chr4.1:76289310-76289329 | MS.gene073495:CDS | 40.0% |
| !! | GTTGGTAGTCTAGCTTATGA+TGG | - | chr4.1:76290800-76290819 | MS.gene073495:intron | 40.0% |
| !! | TTAGCTATTTTCACGGATCC+GGG | - | chr4.1:76287982-76288001 | MS.gene073495:intron | 40.0% |
| !! | TTTGGTCTTTTCTCTTCACC+TGG | - | chr4.1:76287901-76287920 | MS.gene073495:intron | 40.0% |
| !!! | GCTTATAGTGAGAGCACTTT+TGG | + | chr4.1:76290338-76290357 | None:intergenic | 40.0% |
| AACCCGCATTTGATGTGGTA+TGG | - | chr4.1:76290032-76290051 | MS.gene073495:intron | 45.0% | |
| ACAGCAAGCCATATAGGTTC+TGG | - | chr4.1:76292037-76292056 | MS.gene073495:CDS | 45.0% | |
| ACATCAGGCGTATACGTAGA+CGG | + | chr4.1:76288015-76288034 | None:intergenic | 45.0% | |
| ACCATTCACGTGGCAGAAAA+AGG | - | chr4.1:76290182-76290201 | MS.gene073495:intron | 45.0% | |
| ACTTCGTTGAACCATTCACG+TGG | - | chr4.1:76290172-76290191 | MS.gene073495:intron | 45.0% | |
| ATCAATGAAGACGAAGACGG+TGG | + | chr4.1:76287875-76287894 | None:intergenic | 45.0% | |
| ATGAAGGAGTGAGAGCTTTG+TGG | - | chr4.1:76291140-76291159 | MS.gene073495:intron | 45.0% | |
| ATGAGCTACGACAAATCACG+TGG | - | chr4.1:76288260-76288279 | MS.gene073495:intron | 45.0% | |
| ATTCCTTAACTAGTGCCCCA+GGG | + | chr4.1:76289584-76289603 | None:intergenic | 45.0% | |
| CAAATATCCTTAGCTGGCTG+TGG | - | chr4.1:76292011-76292030 | MS.gene073495:CDS | 45.0% | |
| CACAGCCAGCTAAGGATATT+TGG | + | chr4.1:76292013-76292032 | None:intergenic | 45.0% | |
| CATGATCAACAGTGGCACTT+AGG | + | chr4.1:76289412-76289431 | None:intergenic | 45.0% | |
| GATGAAATGACGACGGTTAC+CGG | + | chr4.1:76287832-76287851 | None:intergenic | 45.0% | |
| GATTGCCTGCATTTACTCCA+TGG | - | chr4.1:76290570-76290589 | MS.gene073495:intron | 45.0% | |
| GCATGTCATAACCTCTATCG+TGG | + | chr4.1:76291043-76291062 | None:intergenic | 45.0% | |
| GCTTTGTGGCTTCAAGAGAA+GGG | - | chr4.1:76291154-76291173 | MS.gene073495:intron | 45.0% | |
| TCAAATTCTCATACGGGCCA+AGG | + | chr4.1:76291207-76291226 | None:intergenic | 45.0% | |
| TCACGCAAATACAACGTGGT+AGG | + | chr4.1:76290652-76290671 | None:intergenic | 45.0% | |
| TCAGATGTGAAGGTGACAGA+TGG | - | chr4.1:76291806-76291825 | MS.gene073495:intron | 45.0% | |
| TGGCCACTACAATGAAACTC+CGG | + | chr4.1:76289332-76289351 | None:intergenic | 45.0% | |
| TGGGACCAAATATCCTTAGC+TGG | - | chr4.1:76292005-76292024 | MS.gene073495:CDS | 45.0% | |
| TTGAGCGAAGACTAACACCT+AGG | + | chr4.1:76289008-76289027 | None:intergenic | 45.0% | |
| ! | AGCTTTGTGGCTTCAAGAGA+AGG | - | chr4.1:76291153-76291172 | MS.gene073495:intron | 45.0% |
| ! | TCCTTTTTCTGCCACGTGAA+TGG | + | chr4.1:76290186-76290205 | None:intergenic | 45.0% |
| ! | TGGAATGCTTCCCTTTTAGC+TGG | - | chr4.1:76288750-76288769 | MS.gene073495:intron | 45.0% |
| !! | AACATCATGATAGTGGGAGG+TGG | + | chr4.1:76288957-76288976 | None:intergenic | 45.0% |
| !! | CGCAACAATATTTTGGGGGT+TGG | + | chr4.1:76289160-76289179 | None:intergenic | 45.0% |
| !! | GAACCTATATGGCTTGCTGT+TGG | + | chr4.1:76292037-76292056 | None:intergenic | 45.0% |
| !! | GCCATATAGGTTCTGGACTT+AGG | - | chr4.1:76292044-76292063 | MS.gene073495:CDS | 45.0% |
| !! | TGCTTCCCTTTTAGCTGGAT+AGG | - | chr4.1:76288755-76288774 | MS.gene073495:intron | 45.0% |
| !!! | TGATCAAGGTTTTGGGAGCT+TGG | - | chr4.1:76288811-76288830 | MS.gene073495:intron | 45.0% |
| AACTGATGCGCGCACATTTG+TGG | - | chr4.1:76289077-76289096 | MS.gene073495:CDS | 50.0% | |
| ACGACGGCGTTTATGATTCC+AGG | + | chr4.1:76287922-76287941 | None:intergenic | 50.0% | |
| AGCAGGGTGGGAGAAAAAAC+AGG | + | chr4.1:76291282-76291301 | None:intergenic | 50.0% | |
| CGGTTGTCTTCCCTTGAAAG+AGG | - | chr4.1:76289954-76289973 | MS.gene073495:intron | 50.0% | |
| GATTCCTTAACTAGTGCCCC+AGG | + | chr4.1:76289585-76289604 | None:intergenic | 50.0% | |
| GCGCATCAGTTGTACTCAAC+TGG | + | chr4.1:76289068-76289087 | None:intergenic | 50.0% | |
| TCATACGGGCCAAGGTCATA+TGG | + | chr4.1:76291199-76291218 | None:intergenic | 50.0% | |
| TGGCCAACAGCAAGCCATAT+AGG | - | chr4.1:76292031-76292050 | MS.gene073495:CDS | 50.0% | |
| TGTGGCTTCAAGAGAAGGGT+GGG | - | chr4.1:76291158-76291177 | MS.gene073495:intron | 50.0% | |
| TTCATGAGCTGTCAGCTCAG+TGG | + | chr4.1:76288491-76288510 | None:intergenic | 50.0% | |
| TTGTGGCTTCAAGAGAAGGG+TGG | - | chr4.1:76291157-76291176 | MS.gene073495:intron | 50.0% | |
| ! | AGCGATGACGGTGAAAACGA+CGG | + | chr4.1:76287938-76287957 | None:intergenic | 50.0% |
| ! | CTATTTTCACGGATCCGGGT+CGG | - | chr4.1:76287986-76288005 | MS.gene073495:intron | 50.0% |
| ! | GTTTTCCTTCACTAGTGCCC+CGG | - | chr4.1:76289693-76289712 | MS.gene073495:intron | 50.0% |
| ! | TATTGTTGCGGTATAGCGGG+TGG | - | chr4.1:76289170-76289189 | MS.gene073495:intron | 50.0% |
| ! | TATTTTCACGGATCCGGGTC+GGG | - | chr4.1:76287987-76288006 | MS.gene073495:intron | 50.0% |
| ! | TTTCCCTGGGGCACTAGTTA+AGG | - | chr4.1:76289578-76289597 | MS.gene073495:intron | 50.0% |
| ! | TTTTCCTTCACTAGTGCCCC+GGG | - | chr4.1:76289694-76289713 | MS.gene073495:intron | 50.0% |
| !! | ATCATGATAGTGGGAGGTGG+CGG | + | chr4.1:76288954-76288973 | None:intergenic | 50.0% |
| !! | GGTTGTTTCTGGGCTCTTAC+TGG | - | chr4.1:76290951-76290970 | MS.gene073495:intron | 50.0% |
| !!! | TTTTGGAACTGTGAGCAGGG+TGG | - | chr4.1:76290297-76290316 | MS.gene073495:intron | 50.0% |
| AACCCCGGCAATGATGTGCA+CGG | + | chr4.1:76290365-76290384 | None:intergenic | 55.0% | |
| ACTCTGTGGCTGCAACGTCA+AGG | + | chr4.1:76289132-76289151 | None:intergenic | 55.0% | |
| GAGAAAGCGAAGCAGCAACG+CGG | - | chr4.1:76287781-76287800 | MS.gene073495:CDS | 55.0% | |
| GGCCGCTACACCGAAGATTA+AGG | - | chr4.1:76289199-76289218 | MS.gene073495:intron | 55.0% | |
| GTCATGCTAACTAGTGCCCC+CGG | + | chr4.1:76289715-76289734 | None:intergenic | 55.0% | |
| GTGAGCAGGGTGGAGATTTG+AGG | - | chr4.1:76290307-76290326 | MS.gene073495:intron | 55.0% | |
| TCATGCTAACTAGTGCCCCC+GGG | + | chr4.1:76289714-76289733 | None:intergenic | 55.0% | |
| TTGGGAGCTTGGCAGTGTTG+CGG | - | chr4.1:76288822-76288841 | MS.gene073495:intron | 55.0% | |
| TTTCCTTCACTAGTGCCCCG+GGG | - | chr4.1:76289695-76289714 | MS.gene073495:intron | 55.0% | |
| !! | AGGTGGCGGAAATCAGGTTG+CGG | + | chr4.1:76288940-76288959 | None:intergenic | 55.0% |
| AAAGCGAAGCAGCAACGCGG+CGG | - | chr4.1:76287784-76287803 | MS.gene073495:CDS | 60.0% | |
| ACCCCGGCAATGATGTGCAC+GGG | + | chr4.1:76290364-76290383 | None:intergenic | 60.0% | |
| CATGCTAACTAGTGCCCCCG+GGG | + | chr4.1:76289713-76289732 | None:intergenic | 60.0% | |
| CGGCTTCGCGTTCTCGTTTC+CGG | - | chr4.1:76287810-76287829 | MS.gene073495:CDS | 60.0% | |
| CTCCCCGTGCACATCATTGC+CGG | - | chr4.1:76290358-76290377 | MS.gene073495:intron | 60.0% | |
| CTGTTGGCCACAGCCAGCTA+AGG | + | chr4.1:76292021-76292040 | None:intergenic | 60.0% | |
| TACGTAGACGGAACCCGACC+CGG | + | chr4.1:76288003-76288022 | None:intergenic | 60.0% | |
| TCCCCGTGCACATCATTGCC+GGG | - | chr4.1:76290359-76290378 | MS.gene073495:intron | 60.0% | |
| TTCCTTCACTAGTGCCCCGG+GGG | - | chr4.1:76289696-76289715 | MS.gene073495:intron | 60.0% | |
| ! | GGCGGAAATCAGGTTGCGGT+TGG | + | chr4.1:76288936-76288955 | None:intergenic | 60.0% |
| ! | GGGGGTTGGCAGATACTCTG+TGG | + | chr4.1:76289146-76289165 | None:intergenic | 60.0% |
| ! | TCTTCGGTGTAGCGGCCGTA+CGG | + | chr4.1:76289196-76289215 | None:intergenic | 60.0% |
| !! | AGTGGGAGGTGGCGGAAATC+AGG | + | chr4.1:76288946-76288965 | None:intergenic | 60.0% |
| CCCCGGCAATGATGTGCACG+GGG | + | chr4.1:76290363-76290382 | None:intergenic | 65.0% | |
| CCCCGTGCACATCATTGCCG+GGG | - | chr4.1:76290360-76290379 | MS.gene073495:intron | 65.0% | |
| CGGCAATGATGTGCACGGGG+AGG | + | chr4.1:76290360-76290379 | None:intergenic | 65.0% | |
| !! | CGGTATAGCGGGTGGCCGTA+CGG | - | chr4.1:76289178-76289197 | MS.gene073495:intron | 65.0% |
| ! | TGCCCCCGGGGCACTAGTGA+AGG | + | chr4.1:76289701-76289720 | None:intergenic | 70.0% |
| AAGCAGCAACGCGGCGGCGG+CGG | - | chr4.1:76287790-76287809 | MS.gene073495:CDS | 75.0% | |
| GCGAAGCAGCAACGCGGCGG+CGG | - | chr4.1:76287787-76287806 | MS.gene073495:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 76287775 | 76292114 | 76287775 | ID=MS.gene073495 |
| chr4.1 | mRNA | 76287775 | 76292114 | 76287775 | ID=MS.gene073495.t1;Parent=MS.gene073495 |
| chr4.1 | exon | 76291815 | 76292114 | 76291815 | ID=MS.gene073495.t1.exon1;Parent=MS.gene073495.t1 |
| chr4.1 | CDS | 76291815 | 76292114 | 76291815 | ID=cds.MS.gene073495.t1;Parent=MS.gene073495.t1 |
| chr4.1 | exon | 76289482 | 76289574 | 76289482 | ID=MS.gene073495.t1.exon2;Parent=MS.gene073495.t1 |
| chr4.1 | CDS | 76289482 | 76289574 | 76289482 | ID=cds.MS.gene073495.t1;Parent=MS.gene073495.t1 |
| chr4.1 | exon | 76289298 | 76289399 | 76289298 | ID=MS.gene073495.t1.exon3;Parent=MS.gene073495.t1 |
| chr4.1 | CDS | 76289298 | 76289399 | 76289298 | ID=cds.MS.gene073495.t1;Parent=MS.gene073495.t1 |
| chr4.1 | exon | 76289021 | 76289098 | 76289021 | ID=MS.gene073495.t1.exon4;Parent=MS.gene073495.t1 |
| chr4.1 | CDS | 76289021 | 76289098 | 76289021 | ID=cds.MS.gene073495.t1;Parent=MS.gene073495.t1 |
| chr4.1 | exon | 76288839 | 76288937 | 76288839 | ID=MS.gene073495.t1.exon5;Parent=MS.gene073495.t1 |
| chr4.1 | CDS | 76288839 | 76288937 | 76288839 | ID=cds.MS.gene073495.t1;Parent=MS.gene073495.t1 |
| chr4.1 | exon | 76288658 | 76288753 | 76288658 | ID=MS.gene073495.t1.exon6;Parent=MS.gene073495.t1 |
| chr4.1 | CDS | 76288658 | 76288753 | 76288658 | ID=cds.MS.gene073495.t1;Parent=MS.gene073495.t1 |
| chr4.1 | exon | 76287775 | 76287888 | 76287775 | ID=MS.gene073495.t1.exon7;Parent=MS.gene073495.t1 |
| chr4.1 | CDS | 76287775 | 76287888 | 76287775 | ID=cds.MS.gene073495.t1;Parent=MS.gene073495.t1 |
| Gene Sequence |
| Protein sequence |
