Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073828.t1 | XP_024634706.1 | 96.4 | 411 | 3 | 1 | 1 | 399 | 18 | 428 | 2.00E-226 | 794.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073828.t1 | Q8VZC0 | 80.6 | 418 | 57 | 3 | 3 | 398 | 20 | 435 | 9.7e-193 | 674.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073828.t1 | A0A072VW87 | 89.4 | 443 | 3 | 1 | 1 | 399 | 18 | 460 | 7.5e-223 | 782.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064542 | MS.gene073828 | PPI |
| MS.gene73119 | MS.gene073828 | PPI |
| MS.gene035805 | MS.gene073828 | PPI |
| MS.gene20737 | MS.gene073828 | PPI |
| MS.gene005596 | MS.gene073828 | PPI |
| MS.gene07219 | MS.gene073828 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073828.t1 | MTR_1g067530 | 89.391 | 443 | 3 | 1 | 1 | 399 | 18 | 460 | 0.0 | 792 |
| MS.gene073828.t1 | MTR_1g088480 | 71.394 | 409 | 98 | 3 | 8 | 397 | 19 | 427 | 0.0 | 579 |
| MS.gene073828.t1 | MTR_4g120030 | 70.305 | 394 | 100 | 5 | 17 | 395 | 28 | 419 | 0.0 | 545 |
| MS.gene073828.t1 | MTR_4g063600 | 69.508 | 305 | 83 | 2 | 95 | 389 | 32 | 336 | 1.54e-153 | 437 |
| MS.gene073828.t1 | MTR_4g063600 | 68.831 | 308 | 83 | 2 | 95 | 389 | 32 | 339 | 3.31e-153 | 436 |
| MS.gene073828.t1 | MTR_2g096660 | 68.831 | 308 | 83 | 2 | 95 | 389 | 38 | 345 | 9.80e-152 | 433 |
| MS.gene073828.t1 | MTR_7g115080 | 26.667 | 330 | 205 | 10 | 93 | 395 | 40 | 359 | 1.29e-23 | 101 |
| MS.gene073828.t1 | MTR_7g115080 | 26.667 | 330 | 205 | 10 | 93 | 395 | 61 | 380 | 1.44e-23 | 102 |
| MS.gene073828.t1 | MTR_7g115080 | 26.667 | 330 | 205 | 10 | 93 | 395 | 27 | 346 | 1.44e-23 | 101 |
| MS.gene073828.t1 | MTR_1g080950 | 26.087 | 322 | 212 | 8 | 93 | 392 | 26 | 343 | 3.27e-23 | 100 |
| MS.gene073828.t1 | MTR_1g080950 | 25.915 | 328 | 216 | 9 | 93 | 398 | 62 | 384 | 4.06e-23 | 100 |
| MS.gene073828.t1 | MTR_1g009600 | 25.312 | 320 | 203 | 12 | 97 | 387 | 7 | 319 | 1.02e-22 | 100 |
| MS.gene073828.t1 | MTR_2g073240 | 27.010 | 311 | 191 | 12 | 97 | 378 | 21 | 324 | 1.47e-21 | 97.4 |
| MS.gene073828.t1 | MTR_0034s0060 | 26.367 | 311 | 193 | 12 | 97 | 378 | 139 | 442 | 2.49e-20 | 93.6 |
| MS.gene073828.t1 | MTR_4g056100 | 25.989 | 354 | 189 | 15 | 93 | 378 | 17 | 365 | 4.09e-19 | 88.6 |
| MS.gene073828.t1 | MTR_4g053420 | 24.138 | 348 | 196 | 14 | 95 | 378 | 14 | 357 | 3.63e-18 | 85.9 |
| MS.gene073828.t1 | MTR_1g107455 | 26.554 | 354 | 187 | 14 | 93 | 378 | 17 | 365 | 1.26e-17 | 84.3 |
| MS.gene073828.t1 | MTR_0354s0040 | 25.255 | 392 | 232 | 14 | 45 | 387 | 32 | 411 | 1.43e-16 | 81.3 |
| MS.gene073828.t1 | MTR_4g102270 | 23.765 | 425 | 261 | 14 | 1 | 378 | 5 | 413 | 2.17e-15 | 77.8 |
| MS.gene073828.t1 | MTR_4g056100 | 25.850 | 294 | 160 | 13 | 93 | 332 | 17 | 306 | 4.90e-15 | 75.9 |
| MS.gene073828.t1 | MTR_4g134490 | 28.814 | 354 | 187 | 19 | 94 | 395 | 24 | 364 | 1.10e-14 | 75.5 |
| MS.gene073828.t1 | MTR_8g099535 | 26.480 | 321 | 185 | 14 | 97 | 371 | 6 | 321 | 1.78e-14 | 74.3 |
| MS.gene073828.t1 | MTR_4g134490 | 28.652 | 356 | 191 | 19 | 94 | 395 | 24 | 370 | 2.43e-14 | 74.3 |
| MS.gene073828.t1 | MTR_5g011940 | 25.852 | 352 | 201 | 12 | 92 | 393 | 87 | 428 | 2.78e-14 | 74.3 |
| MS.gene073828.t1 | MTR_1g108530 | 24.776 | 335 | 199 | 12 | 93 | 378 | 17 | 347 | 3.96e-14 | 73.6 |
| MS.gene073828.t1 | MTR_4g024600 | 25.000 | 340 | 198 | 11 | 95 | 387 | 101 | 430 | 4.91e-14 | 73.6 |
| MS.gene073828.t1 | MTR_4g129820 | 24.484 | 339 | 197 | 12 | 95 | 385 | 95 | 422 | 6.66e-14 | 73.2 |
| MS.gene073828.t1 | MTR_4g056100 | 25.283 | 265 | 148 | 10 | 93 | 309 | 17 | 279 | 1.83e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073828.t1 | AT3G53520 | 79.904 | 418 | 60 | 3 | 3 | 398 | 20 | 435 | 0.0 | 672 |
| MS.gene073828.t1 | AT3G53520 | 79.665 | 418 | 59 | 4 | 3 | 398 | 20 | 433 | 0.0 | 666 |
| MS.gene073828.t1 | AT3G53520 | 75.964 | 441 | 59 | 4 | 3 | 398 | 20 | 458 | 0.0 | 661 |
| MS.gene073828.t1 | AT3G62830 | 68.765 | 413 | 104 | 5 | 8 | 395 | 20 | 432 | 0.0 | 565 |
| MS.gene073828.t1 | AT3G62830 | 68.765 | 413 | 104 | 5 | 8 | 395 | 20 | 432 | 0.0 | 565 |
| MS.gene073828.t1 | AT2G47650 | 67.299 | 422 | 102 | 6 | 4 | 394 | 16 | 432 | 0.0 | 560 |
| MS.gene073828.t1 | AT2G47650 | 66.589 | 428 | 101 | 7 | 4 | 394 | 16 | 438 | 0.0 | 555 |
| MS.gene073828.t1 | AT3G53520 | 78.438 | 320 | 45 | 3 | 3 | 300 | 20 | 337 | 6.33e-179 | 502 |
| MS.gene073828.t1 | AT2G28760 | 68.831 | 308 | 83 | 2 | 95 | 389 | 31 | 338 | 1.76e-154 | 439 |
| MS.gene073828.t1 | AT2G28760 | 68.831 | 308 | 83 | 2 | 95 | 389 | 31 | 338 | 1.76e-154 | 439 |
| MS.gene073828.t1 | AT2G28760 | 68.831 | 308 | 83 | 2 | 95 | 389 | 31 | 338 | 1.76e-154 | 439 |
| MS.gene073828.t1 | AT2G28760 | 68.831 | 308 | 83 | 2 | 95 | 389 | 62 | 369 | 2.11e-154 | 441 |
| MS.gene073828.t1 | AT3G46440 | 68.506 | 308 | 84 | 2 | 95 | 389 | 29 | 336 | 3.27e-154 | 439 |
| MS.gene073828.t1 | AT3G46440 | 68.506 | 308 | 84 | 2 | 95 | 389 | 29 | 336 | 3.27e-154 | 439 |
| MS.gene073828.t1 | AT5G59290 | 68.506 | 308 | 84 | 2 | 95 | 389 | 30 | 337 | 4.31e-154 | 439 |
| MS.gene073828.t1 | AT5G59290 | 68.506 | 308 | 84 | 2 | 95 | 389 | 1 | 308 | 5.73e-154 | 437 |
| MS.gene073828.t1 | AT5G59290 | 68.506 | 308 | 84 | 2 | 95 | 389 | 45 | 352 | 6.92e-154 | 439 |
| MS.gene073828.t1 | AT5G59290 | 68.506 | 308 | 84 | 2 | 95 | 389 | 23 | 330 | 2.21e-153 | 436 |
| MS.gene073828.t1 | AT3G14790 | 27.476 | 313 | 187 | 11 | 97 | 378 | 12 | 315 | 1.09e-22 | 100 |
| MS.gene073828.t1 | AT3G14790 | 27.476 | 313 | 187 | 11 | 97 | 378 | 9 | 312 | 1.36e-22 | 100 |
| MS.gene073828.t1 | AT1G53500 | 25.879 | 313 | 192 | 11 | 97 | 378 | 11 | 314 | 1.45e-21 | 97.4 |
| MS.gene073828.t1 | AT5G28840 | 26.250 | 320 | 210 | 8 | 95 | 392 | 28 | 343 | 3.41e-21 | 94.7 |
| MS.gene073828.t1 | AT5G28840 | 26.250 | 320 | 210 | 8 | 95 | 392 | 28 | 343 | 3.41e-21 | 94.7 |
| MS.gene073828.t1 | AT1G78570 | 27.157 | 313 | 188 | 11 | 97 | 378 | 9 | 312 | 8.85e-21 | 95.1 |
| MS.gene073828.t1 | AT2G27860 | 25.852 | 352 | 188 | 15 | 95 | 378 | 18 | 364 | 2.76e-19 | 89.4 |
| MS.gene073828.t1 | AT1G08200 | 25.568 | 352 | 189 | 15 | 95 | 378 | 18 | 364 | 1.48e-18 | 87.0 |
| MS.gene073828.t1 | AT2G45310 | 25.075 | 335 | 194 | 11 | 95 | 382 | 97 | 421 | 5.18e-15 | 76.6 |
| MS.gene073828.t1 | AT4G00110 | 24.490 | 392 | 229 | 15 | 35 | 378 | 39 | 411 | 3.25e-14 | 74.3 |
| MS.gene073828.t1 | AT4G23920 | 26.901 | 342 | 193 | 16 | 97 | 391 | 5 | 336 | 6.44e-14 | 72.8 |
| MS.gene073828.t1 | AT1G02000 | 24.495 | 396 | 230 | 16 | 35 | 382 | 42 | 416 | 1.39e-13 | 72.4 |
| MS.gene073828.t1 | AT4G10960 | 27.089 | 347 | 194 | 17 | 97 | 395 | 6 | 341 | 3.45e-13 | 70.9 |
| MS.gene073828.t1 | AT4G30440 | 24.699 | 332 | 199 | 11 | 95 | 382 | 88 | 412 | 1.22e-12 | 69.3 |
| MS.gene073828.t1 | AT3G23820 | 25.826 | 333 | 194 | 14 | 95 | 382 | 112 | 436 | 5.19e-12 | 67.8 |
| MS.gene073828.t1 | AT4G12250 | 24.009 | 429 | 263 | 14 | 7 | 385 | 8 | 423 | 1.06e-11 | 66.6 |
Find 120 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAATTTGGTTCATTTGTT+TGG | 0.195117 | 1.3:+47431393 | MS.gene073828:CDS |
| CTCTGATGGTTAGCGATTTC+CGG | 0.198920 | 1.3:+47435724 | MS.gene073828:CDS |
| TCCTTTGCTTTGCTAATATC+TGG | 0.222306 | 1.3:-47435657 | None:intergenic |
| TACTGGGAGGAAAGAGAATT+TGG | 0.223365 | 1.3:+47431380 | MS.gene073828:CDS |
| CCGGAATCCTCCCCACTCTA+AGG | 0.261658 | 1.3:-47431236 | None:intergenic |
| GTCCATATGTGTTGAAAATT+CGG | 0.271718 | 1.3:-47434517 | None:intergenic |
| CGTGTGTGCTTCATTGATTT+TGG | 0.283761 | 1.3:-47431024 | None:intergenic |
| AAGCAAAGGAACTGCTAAAC+TGG | 0.287296 | 1.3:+47435670 | MS.gene073828:CDS |
| ATCCTCAGAAAGAGACTTAC+TGG | 0.308465 | 1.3:+47432410 | MS.gene073828:CDS |
| AGAATTTGGTTCATTTGTTT+GGG | 0.310857 | 1.3:+47431394 | MS.gene073828:CDS |
| AGGTTGAGAGTGGTGGTTAC+TGG | 0.338375 | 1.3:+47431276 | MS.gene073828:CDS |
| GGGAGGATTCCGGCGGGAAT+TGG | 0.339431 | 1.3:+47431246 | MS.gene073828:CDS |
| TTTCCGATTCACAGGTTAAT+GGG | 0.345106 | 1.3:+47435247 | MS.gene073828:intron |
| TTTCCAATATGTCTCTGATT+TGG | 0.350994 | 1.3:+47434743 | MS.gene073828:CDS |
| AAACAACCATTGACTGTATA+CGG | 0.354678 | 1.3:+47434699 | MS.gene073828:CDS |
| ACTGGTGGTGCGGGGTTTGT+TGG | 0.364922 | 1.3:+47431294 | MS.gene073828:CDS |
| AGGATTCCGGCGGGAATTGG+TGG | 0.368653 | 1.3:+47431249 | MS.gene073828:CDS |
| CCTTAGAGTGGGGAGGATTC+CGG | 0.372009 | 1.3:+47431236 | MS.gene073828:CDS |
| TAATGGGCTGGCAGCTTTGA+TGG | 0.374866 | 1.3:+47435263 | MS.gene073828:CDS |
| TAAGAGGTAGTTGATCGATC+TGG | 0.381265 | 1.3:-47431055 | None:intergenic |
| CTACCAAATCAGAGACATAT+TGG | 0.385168 | 1.3:-47434746 | None:intergenic |
| AAGGGATGCACCTTCGTTGC+CGG | 0.392844 | 1.3:-47431217 | None:intergenic |
| TGATCAACCTCAAGCAAAAT+CGG | 0.404285 | 1.3:-47431456 | None:intergenic |
| CATTTGGTTGATAAGTTGAT+TGG | 0.411126 | 1.3:+47431321 | MS.gene073828:CDS |
| GTGGTGGTTACTGGTGGTGC+GGG | 0.412049 | 1.3:+47431285 | MS.gene073828:CDS |
| TGAGGTATATGGTGATCCTT+TGG | 0.422529 | 1.3:+47432384 | MS.gene073828:CDS |
| TCCATATGTGTTGAAAATTC+GGG | 0.422719 | 1.3:-47434516 | None:intergenic |
| CTTCGTTGCCGGAGTTGAAC+CGG | 0.424160 | 1.3:-47431206 | None:intergenic |
| CTTCATTCAAAATCCGATTC+CGG | 0.427534 | 1.3:-47435743 | None:intergenic |
| GAAGACGTTGTTCTCGTAAG+AGG | 0.429983 | 1.3:-47431071 | None:intergenic |
| ATGGGTACACTTAATATGTT+GGG | 0.437761 | 1.3:+47432316 | MS.gene073828:CDS |
| TGGGGCTAGCAAAGAGAATC+GGG | 0.443187 | 1.3:+47432335 | MS.gene073828:CDS |
| GGGGTTTGTTGGAAGTCATT+TGG | 0.444177 | 1.3:+47431305 | MS.gene073828:CDS |
| TCTAACATGGTGAATTCGCC+TGG | 0.444776 | 1.3:-47435321 | None:intergenic |
| GTTGATAAGTTGATTGGTAG+AGG | 0.452000 | 1.3:+47431327 | MS.gene073828:CDS |
| GAGAGGAGTTGTTATGATGA+AGG | 0.452967 | 1.3:+47432534 | MS.gene073828:CDS |
| ACTAGTACTAGTGAGGTATA+TGG | 0.456353 | 1.3:+47432373 | MS.gene073828:CDS |
| AAGAGGTAGTTGATCGATCT+GGG | 0.463238 | 1.3:-47431054 | None:intergenic |
| TACCTAGATCTGGATTGGTC+CGG | 0.466016 | 1.3:+47431187 | MS.gene073828:CDS |
| TTGGGGCTAGCAAAGAGAAT+CGG | 0.473363 | 1.3:+47432334 | MS.gene073828:CDS |
| TTCATTTGTTTGGGAACCCT+AGG | 0.477292 | 1.3:+47431403 | MS.gene073828:CDS |
| TGGTTAGCGATTTCCGGAAT+CGG | 0.480848 | 1.3:+47435730 | MS.gene073828:CDS |
| ATGGATTATCATCGAGGTGC+TGG | 0.482226 | 1.3:+47432582 | MS.gene073828:CDS |
| CGCATAAGTCCACCGGAGGC+CGG | 0.489930 | 1.3:+47431156 | MS.gene073828:CDS |
| CCATTGACTGTATACGGTGA+TGG | 0.498309 | 1.3:+47434705 | MS.gene073828:CDS |
| TGACGAATTAACTCAAACCT+AGG | 0.505279 | 1.3:-47431420 | None:intergenic |
| CGATTCACAGGTTAATGGGC+TGG | 0.508020 | 1.3:+47435251 | MS.gene073828:intron |
| CCCATCATCTAAACACATGC+GGG | 0.508792 | 1.3:-47434540 | None:intergenic |
| CCCGCATGTGTTTAGATGAT+GGG | 0.513142 | 1.3:+47434540 | MS.gene073828:CDS |
| CCATCACCGTATACAGTCAA+TGG | 0.514193 | 1.3:-47434705 | None:intergenic |
| CCCCGCATGTGTTTAGATGA+TGG | 0.517049 | 1.3:+47434539 | MS.gene073828:CDS |
| CACCATGTTAGAGCTTGCTC+AGG | 0.517775 | 1.3:+47435332 | MS.gene073828:CDS |
| TTATAATGAACAGGTGAGGC+AGG | 0.524789 | 1.3:-47431498 | None:intergenic |
| CGGCGGGAATTGGTGGTCGG+AGG | 0.527137 | 1.3:+47431256 | MS.gene073828:CDS |
| TGGACTTATGCGTGAAAGCG+TGG | 0.527221 | 1.3:-47431145 | None:intergenic |
| TTGAATGAAGACGAAGGGAA+AGG | 0.535562 | 1.3:+47435756 | MS.gene073828:CDS |
| TCTTTCTGAGGATGCTCCAA+AGG | 0.536160 | 1.3:-47432400 | None:intergenic |
| AACCGGACCAATCCAGATCT+AGG | 0.540724 | 1.3:-47431189 | None:intergenic |
| GCATGTTGGACCTTTCAACC+TGG | 0.542568 | 1.3:+47435293 | MS.gene073828:CDS |
| ATATCTGGTTTCCTCATGTG+TGG | 0.542809 | 1.3:-47435642 | None:intergenic |
| CCTGGGTTACCCAGGTTGAA+AGG | 0.544164 | 1.3:-47435303 | None:intergenic |
| TGGTGGTCGGAGGTTGAGAG+TGG | 0.551725 | 1.3:+47431266 | MS.gene073828:CDS |
| AACTGCGGAAACACTTGCCA+TGG | 0.557107 | 1.3:+47432563 | MS.gene073828:CDS |
| CATTGACTGTATACGGTGAT+GGG | 0.558298 | 1.3:+47434706 | MS.gene073828:CDS |
| GATGGGTACACTTAATATGT+TGG | 0.563378 | 1.3:+47432315 | MS.gene073828:CDS |
| GAGGGAAGGTCTGCCTCTGA+TGG | 0.564662 | 1.3:+47435710 | MS.gene073828:CDS |
| CCCCAGTAAGTCTCTTTCTG+AGG | 0.565786 | 1.3:-47432412 | None:intergenic |
| TTGATAAGTTGATTGGTAGA+GGG | 0.566398 | 1.3:+47431328 | MS.gene073828:CDS |
| TCCTCAGAAAGAGACTTACT+GGG | 0.566496 | 1.3:+47432411 | MS.gene073828:CDS |
| TGGTCGGAGGTTGAGAGTGG+TGG | 0.567865 | 1.3:+47431269 | MS.gene073828:CDS |
| TTCCGGCGGGAATTGGTGGT+CGG | 0.572919 | 1.3:+47431253 | MS.gene073828:CDS |
| CGGAATCCTCCCCACTCTAA+GGG | 0.574600 | 1.3:-47431235 | None:intergenic |
| AGTGGTGGTTACTGGTGGTG+CGG | 0.575709 | 1.3:+47431284 | MS.gene073828:CDS |
| AGCAAAGGAACTGCTAAACT+GGG | 0.578352 | 1.3:+47435671 | MS.gene073828:CDS |
| GGATTGGTCCGGTTCAACTC+CGG | 0.579392 | 1.3:+47431198 | MS.gene073828:CDS |
| TAGCAAAGAGAATCGGGGCG+AGG | 0.581519 | 1.3:+47432341 | MS.gene073828:CDS |
| CGAAGGTGCATCCCTTAGAG+TGG | 0.583204 | 1.3:+47431224 | MS.gene073828:CDS |
| CATGTTGGACCTTTCAACCT+GGG | 0.583530 | 1.3:+47435294 | MS.gene073828:CDS |
| CGGTTCAACTCCGGCAACGA+AGG | 0.584902 | 1.3:+47431207 | MS.gene073828:CDS |
| ACCAGATATTAGCAAAGCAA+AGG | 0.586183 | 1.3:+47435656 | MS.gene073828:CDS |
| CGGAAATCGCTAACCATCAG+AGG | 0.587191 | 1.3:-47435723 | None:intergenic |
| GAAGGTGCATCCCTTAGAGT+GGG | 0.589233 | 1.3:+47431225 | MS.gene073828:CDS |
| GAGGCAGACCTTCCCTCAGT+GGG | 0.595211 | 1.3:-47435704 | None:intergenic |
| TCATCGAGGTGCTGGCGTTG+AGG | 0.598019 | 1.3:+47432590 | MS.gene073828:CDS |
| TGAATTCGCCTGGGTTACCC+AGG | 0.599406 | 1.3:-47435311 | None:intergenic |
| GGGCTGGCAGCTTTGATGGA+TGG | 0.602033 | 1.3:+47435267 | MS.gene073828:CDS |
| TAGAGTGGGGAGGATTCCGG+CGG | 0.603004 | 1.3:+47431239 | MS.gene073828:CDS |
| GATTTACAAGACAAATGTGA+TGG | 0.607290 | 1.3:+47432297 | MS.gene073828:intron |
| GACGAATTAACTCAAACCTA+GGG | 0.609053 | 1.3:-47431419 | None:intergenic |
| TGGTGGTTACTGGTGGTGCG+GGG | 0.612013 | 1.3:+47431286 | MS.gene073828:CDS |
| TACCTGAGCAAGCTCTAACA+TGG | 0.612614 | 1.3:-47435334 | None:intergenic |
| TTGATGGATGGTGAGCATGT+TGG | 0.612814 | 1.3:+47435279 | MS.gene073828:CDS |
| GGTAGTTGATCGATCTGGGG+AGG | 0.613305 | 1.3:-47431050 | None:intergenic |
| CTAACATGGTGAATTCGCCT+GGG | 0.615227 | 1.3:-47435320 | None:intergenic |
| CCTTTCAACCTGGGTAACCC+AGG | 0.616791 | 1.3:+47435303 | MS.gene073828:CDS |
| AGCACCTCGATGATAATCCA+TGG | 0.617547 | 1.3:-47432580 | None:intergenic |
| CGTCTTCTCTTCATCCTCGT+CGG | 0.618862 | 1.3:+47431087 | MS.gene073828:CDS |
| GTAGTTGATCGATCTGGGGA+GGG | 0.619801 | 1.3:-47431049 | None:intergenic |
| GCCCATCATCTAAACACATG+CGG | 0.620747 | 1.3:-47434541 | None:intergenic |
| ATTTACAAGACAAATGTGAT+GGG | 0.627640 | 1.3:+47432298 | MS.gene073828:intron |
| CTCCGACCACCAATTCCCGC+CGG | 0.635861 | 1.3:-47431255 | None:intergenic |
| GCTTTCACGCATAAGTCCAC+CGG | 0.649507 | 1.3:+47431149 | MS.gene073828:CDS |
| AGAGGCAGACCTTCCCTCAG+TGG | 0.650404 | 1.3:-47435705 | None:intergenic |
| TTGAGAGTGGTGGTTACTGG+TGG | 0.651234 | 1.3:+47431279 | MS.gene073828:CDS |
| TTCACGCATAAGTCCACCGG+AGG | 0.657079 | 1.3:+47431152 | MS.gene073828:CDS |
| GGACTTATGCGTGAAAGCGT+GGG | 0.657693 | 1.3:-47431144 | None:intergenic |
| GTGCATCCCTTAGAGTGGGG+AGG | 0.660025 | 1.3:+47431229 | MS.gene073828:CDS |
| AGAGTGGGGAGGATTCCGGC+GGG | 0.664910 | 1.3:+47431240 | MS.gene073828:CDS |
| CTGCTGATGATCCACACATG+AGG | 0.675884 | 1.3:+47435631 | MS.gene073828:CDS |
| ATACTTATAATGAACAGGTG+AGG | 0.680000 | 1.3:-47431502 | None:intergenic |
| TGGGTACACTTAATATGTTG+GGG | 0.687687 | 1.3:+47432317 | MS.gene073828:CDS |
| AAGGTGCATCCCTTAGAGTG+GGG | 0.704743 | 1.3:+47431226 | MS.gene073828:CDS |
| AGAGGTAGTTGATCGATCTG+GGG | 0.705284 | 1.3:-47431053 | None:intergenic |
| CCTCAGAAAGAGACTTACTG+GGG | 0.708574 | 1.3:+47432412 | MS.gene073828:CDS |
| CTCAGAAAGAGACTTACTGG+GGG | 0.710262 | 1.3:+47432413 | MS.gene073828:CDS |
| CCATCATCTAAACACATGCG+GGG | 0.713472 | 1.3:-47434539 | None:intergenic |
| CTTGCCATGGATTATCATCG+AGG | 0.721056 | 1.3:+47432576 | MS.gene073828:CDS |
| TGATGAAGGAAAGCGAACTG+CGG | 0.722751 | 1.3:+47432548 | MS.gene073828:CDS |
| GGGGCTAGCAAAGAGAATCG+GGG | 0.724312 | 1.3:+47432336 | MS.gene073828:CDS |
| AACCGATCAAAATTCCGACG+AGG | 0.743307 | 1.3:-47431101 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTAAATTAAATTTACTAT+AGG | - | chr1.3:47433481-47433500 | None:intergenic | 10.0% |
| !!! | AAAAAAATATCTATTTTAGT+CGG | + | chr1.3:47433235-47433254 | MS.gene073828:intron | 10.0% |
| !!! | ATTTTTTAAAAGAAATGAAT+TGG | + | chr1.3:47433909-47433928 | MS.gene073828:intron | 10.0% |
| !!! | TGAATTTTAATTTTTTGAAT+TGG | + | chr1.3:47435132-47435151 | MS.gene073828:intron | 10.0% |
| !!! | TTATTGATAATTTTTTTACT+GGG | + | chr1.3:47431364-47431383 | MS.gene073828:CDS | 10.0% |
| !!! | TTTATAATTTTATATCATTG+CGG | + | chr1.3:47433851-47433870 | MS.gene073828:intron | 10.0% |
| !! | AAATTCAAAATAAATAGTAG+TGG | - | chr1.3:47435119-47435138 | None:intergenic | 15.0% |
| !! | TATATTCATTCTTTAATCAA+TGG | + | chr1.3:47435435-47435454 | MS.gene073828:intron | 15.0% |
| !!! | AAATAATTCTTCATTTTTCA+TGG | - | chr1.3:47433893-47433912 | None:intergenic | 15.0% |
| !!! | AATAGATATTTTTTTTTTGG+TGG | - | chr1.3:47433230-47433249 | None:intergenic | 15.0% |
| !!! | AATTATTATGTTGGAATTTT+AGG | + | chr1.3:47432510-47432529 | MS.gene073828:intron | 15.0% |
| !!! | AGTCTAAAATTAATTTATGT+TGG | - | chr1.3:47434427-47434446 | None:intergenic | 15.0% |
| !!! | GTTATTGATAATTTTTTTAC+TGG | + | chr1.3:47431363-47431382 | MS.gene073828:CDS | 15.0% |
| !!! | TTATTTTTTGTTATAGAAAC+AGG | + | chr1.3:47432918-47432937 | MS.gene073828:intron | 15.0% |
| !!! | TTTTTAAGTCATATTAGAAT+TGG | - | chr1.3:47432713-47432732 | None:intergenic | 15.0% |
| !! | AAACAAGAAAGAATGAAAAA+AGG | - | chr1.3:47431550-47431569 | None:intergenic | 20.0% |
| !! | AATCTATCATAAACCATATT+TGG | - | chr1.3:47433739-47433758 | None:intergenic | 20.0% |
| !! | GTACTTCGTTAATAATATAT+CGG | - | chr1.3:47433459-47433478 | None:intergenic | 20.0% |
| !! | TAAAGTAACACAAAGAAAAA+GGG | - | chr1.3:47434607-47434626 | None:intergenic | 20.0% |
| !! | TGGTTTATGATAGATTATTA+TGG | + | chr1.3:47433743-47433762 | MS.gene073828:intron | 20.0% |
| !! | TTAAAGTAACACAAAGAAAA+AGG | - | chr1.3:47434608-47434627 | None:intergenic | 20.0% |
| !! | TTAAGCTGTTTATATAAACA+AGG | + | chr1.3:47432975-47432994 | MS.gene073828:intron | 20.0% |
| !! | TTGATTTACAAATGAGAATT+TGG | + | chr1.3:47433959-47433978 | MS.gene073828:intron | 20.0% |
| !! | TTTGGTATTAACTTATTAAC+AGG | + | chr1.3:47433977-47433996 | MS.gene073828:intron | 20.0% |
| !!! | AAATTTTGTGATTGGAATTT+TGG | + | chr1.3:47431841-47431860 | MS.gene073828:intron | 20.0% |
| !!! | AATTGATAGTACAAATTGAA+AGG | - | chr1.3:47434818-47434837 | None:intergenic | 20.0% |
| !!! | TATTGACTTTATTATGTGAT+TGG | + | chr1.3:47431866-47431885 | MS.gene073828:intron | 20.0% |
| !!! | TTTTTTAAGAAATCATGTTG+TGG | + | chr1.3:47433368-47433387 | MS.gene073828:intron | 20.0% |
| ! | AAACTATAGGAGAAACTATT+AGG | + | chr1.3:47433686-47433705 | MS.gene073828:intron | 25.0% |
| ! | AACTATTAGGAAAGATTTAG+AGG | + | chr1.3:47433699-47433718 | MS.gene073828:intron | 25.0% |
| ! | ATTGGTTATATAGTTCACTT+TGG | - | chr1.3:47434133-47434152 | None:intergenic | 25.0% |
| ! | ATTTACAAGACAAATGTGAT+GGG | + | chr1.3:47432298-47432317 | MS.gene073828:intron | 25.0% |
| ! | CAAATAATTCAAATCCAAAC+AGG | - | chr1.3:47432795-47432814 | None:intergenic | 25.0% |
| ! | CAGCATTTGTAATTATACAT+TGG | + | chr1.3:47435210-47435229 | MS.gene073828:intron | 25.0% |
| ! | GAACTATATAACCAATGAAT+AGG | + | chr1.3:47434137-47434156 | MS.gene073828:intron | 25.0% |
| ! | GTGTAACTTTATTATGTGAT+TGG | + | chr1.3:47431906-47431925 | MS.gene073828:intron | 25.0% |
| ! | GTTCTATCATAAACCAAATT+TGG | - | chr1.3:47433569-47433588 | None:intergenic | 25.0% |
| ! | TACATGCTTCTATTTGAATT+TGG | + | chr1.3:47431583-47431602 | MS.gene073828:intron | 25.0% |
| ! | TAGTTAACAAATATTGAGCA+AGG | - | chr1.3:47432765-47432784 | None:intergenic | 25.0% |
| ! | TATCAATGTACAAAAGTTTG+TGG | + | chr1.3:47434900-47434919 | MS.gene073828:intron | 25.0% |
| ! | TGAAACTACAAAACAAGAAT+AGG | - | chr1.3:47435360-47435379 | None:intergenic | 25.0% |
| ! | TTGGTTATATAGTTCACTTT+GGG | - | chr1.3:47434132-47434151 | None:intergenic | 25.0% |
| ! | TTGTAAATCAAATATCAGCA+AGG | - | chr1.3:47433950-47433969 | None:intergenic | 25.0% |
| !! | AGAATTTGGTTCATTTGTTT+GGG | + | chr1.3:47431394-47431413 | MS.gene073828:CDS | 25.0% |
| !! | ATTTTATGAACTTCTTGTGA+TGG | + | chr1.3:47435534-47435553 | MS.gene073828:intron | 25.0% |
| !! | GAATTTTGTGATTGGATTTT+GGG | + | chr1.3:47432248-47432267 | MS.gene073828:intron | 25.0% |
| !! | GGAAATTTGAATTTTGTGAT+TGG | + | chr1.3:47432240-47432259 | MS.gene073828:intron | 25.0% |
| !! | GGAATTTCAAATTTTGTGAT+TGG | + | chr1.3:47431833-47431852 | MS.gene073828:intron | 25.0% |
| !! | TGAATTTTGTGATTGGATTT+TGG | + | chr1.3:47432247-47432266 | MS.gene073828:intron | 25.0% |
| !!! | AAATTTATTTTCCGATTCAC+AGG | + | chr1.3:47435239-47435258 | MS.gene073828:intron | 25.0% |
| !!! | AGATATTTTTTTTTTGGTGG+TGG | - | chr1.3:47433227-47433246 | None:intergenic | 25.0% |
| !!! | GTGTTACTTTAAATTACTGT+GGG | + | chr1.3:47434616-47434635 | MS.gene073828:intron | 25.0% |
| !!! | TGAGAAATTACGTGTTTTTA+TGG | + | chr1.3:47432481-47432500 | MS.gene073828:intron | 25.0% |
| !!! | TGTGTTACTTTAAATTACTG+TGG | + | chr1.3:47434615-47434634 | MS.gene073828:intron | 25.0% |
| !!! | TTGATAATTTTTTTACTGGG+AGG | + | chr1.3:47431367-47431386 | MS.gene073828:CDS | 25.0% |
| !!! | TTGTTTTTGTAGTTGTTCAA+TGG | + | chr1.3:47431804-47431823 | MS.gene073828:intron | 25.0% |
| !!! | TTTTAGAGAAACCATTAGAA+AGG | + | chr1.3:47433520-47433539 | MS.gene073828:intron | 25.0% |
| AACACAAAGAAAAAGGGAAA+GGG | - | chr1.3:47434601-47434620 | None:intergenic | 30.0% | |
| AACATTAGAGACACTTCTAA+TGG | - | chr1.3:47432126-47432145 | None:intergenic | 30.0% | |
| AACCATTAGAAAGGATTTAG+AGG | + | chr1.3:47433529-47433548 | MS.gene073828:intron | 30.0% | |
| AACTCCTAATATCTTTCAGA+TGG | + | chr1.3:47434969-47434988 | MS.gene073828:intron | 30.0% | |
| AAGGATATGATTGTCTTGAT+AGG | - | chr1.3:47431531-47431550 | None:intergenic | 30.0% | |
| ACACAATATTAAGTGCTAAC+TGG | + | chr1.3:47433298-47433317 | MS.gene073828:intron | 30.0% | |
| ACTTCGTTAATGTTTCAAAG+AGG | - | chr1.3:47435045-47435064 | None:intergenic | 30.0% | |
| AGATTATATAGGGAGAAGAT+TGG | + | chr1.3:47433334-47433353 | MS.gene073828:intron | 30.0% | |
| AGATTTAGAGGTTAATGAGT+TGG | + | chr1.3:47433711-47433730 | MS.gene073828:intron | 30.0% | |
| AGGATATGATTGTCTTGATA+GGG | - | chr1.3:47431530-47431549 | None:intergenic | 30.0% | |
| ATACTTATAATGAACAGGTG+AGG | - | chr1.3:47431505-47431524 | None:intergenic | 30.0% | |
| ATATAACCAATGAATAGGTC+AGG | + | chr1.3:47434142-47434161 | MS.gene073828:intron | 30.0% | |
| ATGCATTGAACTTCAAAAAC+AGG | - | chr1.3:47434214-47434233 | None:intergenic | 30.0% | |
| ATGGGTACACTTAATATGTT+GGG | + | chr1.3:47432316-47432335 | MS.gene073828:CDS | 30.0% | |
| ATGTACAAAAGTTTGTGGTT+TGG | + | chr1.3:47434905-47434924 | MS.gene073828:intron | 30.0% | |
| CAACCATTAAACAACAACAA+CGG | - | chr1.3:47432217-47432236 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr1.3:47433182-47433201 | MS.gene073828:intron | 30.0% | |
| GATTTACAAGACAAATGTGA+TGG | + | chr1.3:47432297-47432316 | MS.gene073828:intron | 30.0% | |
| GGGTTATACTTATAATGAAC+AGG | - | chr1.3:47431510-47431529 | None:intergenic | 30.0% | |
| GTAATCAAATGTGTCAATGT+TGG | + | chr1.3:47432174-47432193 | MS.gene073828:intron | 30.0% | |
| GTCCATATGTGTTGAAAATT+CGG | - | chr1.3:47434520-47434539 | None:intergenic | 30.0% | |
| TAACACAAAGAAAAAGGGAA+AGG | - | chr1.3:47434602-47434621 | None:intergenic | 30.0% | |
| TCCATATGTGTTGAAAATTC+GGG | - | chr1.3:47434519-47434538 | None:intergenic | 30.0% | |
| TGCATTGAACTTCAAAAACA+GGG | - | chr1.3:47434213-47434232 | None:intergenic | 30.0% | |
| TGGTGGCTTAATTATTATGT+TGG | + | chr1.3:47432501-47432520 | MS.gene073828:intron | 30.0% | |
| TGTTCACCTAGAAAAACTAT+AGG | + | chr1.3:47433673-47433692 | MS.gene073828:intron | 30.0% | |
| TTATAAACTCACTCACCAAT+TGG | - | chr1.3:47432448-47432467 | None:intergenic | 30.0% | |
| TTTCCAATATGTCTCTGATT+TGG | + | chr1.3:47434743-47434762 | MS.gene073828:CDS | 30.0% | |
| ! | AAACAACCATTGACTGTATA+CGG | + | chr1.3:47434699-47434718 | MS.gene073828:CDS | 30.0% |
| ! | ATAGTTTTTCTAGGTGAACA+AGG | - | chr1.3:47433673-47433692 | None:intergenic | 30.0% |
| ! | CAATATTTGTTAACTACCTG+TGG | + | chr1.3:47432769-47432788 | MS.gene073828:intron | 30.0% |
| ! | GAGAATTTGGTTCATTTGTT+TGG | + | chr1.3:47431393-47431412 | MS.gene073828:CDS | 30.0% |
| ! | GTTTCTCCTATAGTTTTTCT+AGG | - | chr1.3:47433682-47433701 | None:intergenic | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | + | chr1.3:47433723-47433742 | MS.gene073828:intron | 30.0% |
| ! | TGTTAGTAATTTTGTTGCAC+AGG | + | chr1.3:47434568-47434587 | MS.gene073828:CDS | 30.0% |
| !! | CATTTGGTTGATAAGTTGAT+TGG | + | chr1.3:47431321-47431340 | MS.gene073828:CDS | 30.0% |
| !! | CTTAGCTTGTTCATTCTAAA+AGG | + | chr1.3:47433031-47433050 | MS.gene073828:intron | 30.0% |
| !! | GAAATTACGTGTTTTTATGG+TGG | + | chr1.3:47432484-47432503 | MS.gene073828:intron | 30.0% |
| !! | GTACATTGATAAGCTTTAGA+TGG | - | chr1.3:47434891-47434910 | None:intergenic | 30.0% |
| !! | TCACGTTATTTGTACTGATT+TGG | + | chr1.3:47434468-47434487 | MS.gene073828:intron | 30.0% |
| !! | TCATTTTTCATGGAAAGTTG+AGG | - | chr1.3:47433883-47433902 | None:intergenic | 30.0% |
| !! | TCTTTTAACTAGTACTAGTG+AGG | + | chr1.3:47432366-47432385 | MS.gene073828:CDS | 30.0% |
| !! | TTGATAAGTTGATTGGTAGA+GGG | + | chr1.3:47431328-47431347 | MS.gene073828:CDS | 30.0% |
| !!! | CTTTTAGAATGAACAAGCTA+AGG | - | chr1.3:47433033-47433052 | None:intergenic | 30.0% |
| !!! | TGTTTTTGAAGTTCAATGCA+TGG | + | chr1.3:47434213-47434232 | MS.gene073828:intron | 30.0% |
| !!! | TTCATTGATTTTGGTGAGTA+TGG | - | chr1.3:47431018-47431037 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGATTCCACAACA+TGG | - | chr1.3:47433432-47433451 | None:intergenic | 30.0% |
| AACATTTAGCATGATCTGAC+AGG | - | chr1.3:47435410-47435429 | None:intergenic | 35.0% | |
| AAGGTCGCAGAGATTATATA+GGG | + | chr1.3:47433324-47433343 | MS.gene073828:intron | 35.0% | |
| ACCAGATATTAGCAAAGCAA+AGG | + | chr1.3:47435656-47435675 | MS.gene073828:CDS | 35.0% | |
| ACTAGTACTAGTGAGGTATA+TGG | + | chr1.3:47432373-47432392 | MS.gene073828:CDS | 35.0% | |
| ACTTTAAATTACTGTGGGAG+AGG | + | chr1.3:47434621-47434640 | MS.gene073828:intron | 35.0% | |
| AGATCTAGGTAAAAACGAAC+CGG | - | chr1.3:47431178-47431197 | None:intergenic | 35.0% | |
| AGCTCGGAAACTACATTATA+CGG | - | chr1.3:47433067-47433086 | None:intergenic | 35.0% | |
| AGTGTTTAATTGATCTGAGC+TGG | + | chr1.3:47432630-47432649 | MS.gene073828:intron | 35.0% | |
| ATCTAAACCAGTGTTGTCTA+TGG | + | chr1.3:47434264-47434283 | MS.gene073828:intron | 35.0% | |
| ATGTAAACCGACACATTTGA+TGG | - | chr1.3:47432016-47432035 | None:intergenic | 35.0% | |
| ATTATGGCGTAATTTGATCC+AGG | + | chr1.3:47433759-47433778 | MS.gene073828:intron | 35.0% | |
| ATTCCACAACATGGTTTCTT+AGG | - | chr1.3:47433423-47433442 | None:intergenic | 35.0% | |
| CACTCCATCTGAAAGATATT+AGG | - | chr1.3:47434976-47434995 | None:intergenic | 35.0% | |
| CAGACGATGATTAGCAAAAT+AGG | - | chr1.3:47434856-47434875 | None:intergenic | 35.0% | |
| CCAGTTGACATTAAAAATCG+AGG | - | chr1.3:47433001-47433020 | None:intergenic | 35.0% | |
| CTACCAAATCAGAGACATAT+TGG | - | chr1.3:47434749-47434768 | None:intergenic | 35.0% | |
| CTTCATTCAAAATCCGATTC+CGG | - | chr1.3:47435746-47435765 | None:intergenic | 35.0% | |
| GACCTCTAAATCCTTTCTAA+TGG | - | chr1.3:47433534-47433553 | None:intergenic | 35.0% | |
| GACGAATTAACTCAAACCTA+GGG | - | chr1.3:47431422-47431441 | None:intergenic | 35.0% | |
| GATGGGTACACTTAATATGT+TGG | + | chr1.3:47432315-47432334 | MS.gene073828:CDS | 35.0% | |
| GCATTGAACTTCAAAAACAG+GGG | - | chr1.3:47434212-47434231 | None:intergenic | 35.0% | |
| GTAGTTGTTCAATGGTTGTT+TGG | + | chr1.3:47431812-47431831 | MS.gene073828:intron | 35.0% | |
| TACAGTAAGGGATTAAGCAA+TGG | + | chr1.3:47435489-47435508 | MS.gene073828:intron | 35.0% | |
| TCCTTTGCTTTGCTAATATC+TGG | - | chr1.3:47435660-47435679 | None:intergenic | 35.0% | |
| TGACGAATTAACTCAAACCT+AGG | - | chr1.3:47431423-47431442 | None:intergenic | 35.0% | |
| TGATCAACCTCAAGCAAAAT+CGG | - | chr1.3:47431459-47431478 | None:intergenic | 35.0% | |
| TGGGTACACTTAATATGTTG+GGG | + | chr1.3:47432317-47432336 | MS.gene073828:CDS | 35.0% | |
| TGTTGTGGAATCACAAAAGA+TGG | + | chr1.3:47433383-47433402 | MS.gene073828:intron | 35.0% | |
| TTAGAGACACTTCTAATGGA+AGG | - | chr1.3:47432122-47432141 | None:intergenic | 35.0% | |
| TTCAATCCTGACCTATTCAT+TGG | - | chr1.3:47434151-47434170 | None:intergenic | 35.0% | |
| TTTCCGATTCACAGGTTAAT+GGG | + | chr1.3:47435247-47435266 | MS.gene073828:intron | 35.0% | |
| TTTCCTAAGAAACCATGTTG+TGG | + | chr1.3:47433417-47433436 | MS.gene073828:intron | 35.0% | |
| ! | AATGTGTCAATGTTGGTGTT+AGG | + | chr1.3:47432181-47432200 | MS.gene073828:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATT+TGG | + | chr1.3:47433553-47433572 | MS.gene073828:intron | 35.0% |
| ! | CCTCGATTTTTAATGTCAAC+TGG | + | chr1.3:47432998-47433017 | MS.gene073828:intron | 35.0% |
| ! | GGATTTTGAATGAAGACGAA+GGG | + | chr1.3:47435751-47435770 | MS.gene073828:CDS | 35.0% |
| ! | GTTTTTACCTAGATCTGGAT+TGG | + | chr1.3:47431182-47431201 | MS.gene073828:CDS | 35.0% |
| ! | TAATTGATCTGAGCTGGTTT+AGG | + | chr1.3:47432636-47432655 | MS.gene073828:intron | 35.0% |
| ! | TATCAACTTGGTCTTTCGTT+GGG | + | chr1.3:47433087-47433106 | MS.gene073828:intron | 35.0% |
| ! | TCATCTTTTCAAAAACACGC+AGG | + | chr1.3:47435557-47435576 | MS.gene073828:intron | 35.0% |
| ! | TTATCAACTTGGTCTTTCGT+TGG | + | chr1.3:47433086-47433105 | MS.gene073828:intron | 35.0% |
| ! | TTTTCCGATTCACAGGTTAA+TGG | + | chr1.3:47435246-47435265 | MS.gene073828:intron | 35.0% |
| !! | AAAGACCAAGTTGATAAGCT+CGG | - | chr1.3:47433083-47433102 | None:intergenic | 35.0% |
| !! | ATGTGTCAATGTTGGTGTTA+GGG | + | chr1.3:47432182-47432201 | MS.gene073828:intron | 35.0% |
| !! | ATGTTGGAATTTTAGGTGAG+AGG | + | chr1.3:47432517-47432536 | MS.gene073828:intron | 35.0% |
| !! | ATTGATTTTGGTGAGTATGG+TGG | - | chr1.3:47431015-47431034 | None:intergenic | 35.0% |
| !! | CAATATGTCTCTGATTTGGT+AGG | + | chr1.3:47434747-47434766 | MS.gene073828:intron | 35.0% |
| !! | GTTGATAAGTTGATTGGTAG+AGG | + | chr1.3:47431327-47431346 | MS.gene073828:CDS | 35.0% |
| !! | GTTGTTGTTTAATGGTTGCT+TGG | + | chr1.3:47432219-47432238 | MS.gene073828:intron | 35.0% |
| !! | TTTGTACTGATTTGGTTTGC+TGG | + | chr1.3:47434476-47434495 | MS.gene073828:intron | 35.0% |
| !!! | GATTTGGTTTGCTGGTTTTT+AGG | + | chr1.3:47434484-47434503 | MS.gene073828:intron | 35.0% |
| AAACCGACACATTTGATGGA+AGG | - | chr1.3:47432012-47432031 | None:intergenic | 40.0% | |
| AAGAGGTAGTTGATCGATCT+GGG | - | chr1.3:47431057-47431076 | None:intergenic | 40.0% | |
| AAGCAAAGGAACTGCTAAAC+TGG | + | chr1.3:47435670-47435689 | MS.gene073828:CDS | 40.0% | |
| AGATCAGTGTCGTCAGATAT+TGG | - | chr1.3:47434401-47434420 | None:intergenic | 40.0% | |
| AGCAAAGGAACTGCTAAACT+GGG | + | chr1.3:47435671-47435690 | MS.gene073828:CDS | 40.0% | |
| AGTTTCCGAGCTTATCAACT+TGG | + | chr1.3:47433075-47433094 | MS.gene073828:intron | 40.0% | |
| ATCCTCAGAAAGAGACTTAC+TGG | + | chr1.3:47432410-47432429 | MS.gene073828:CDS | 40.0% | |
| ATGCCTTCCATCAAATGTGT+CGG | + | chr1.3:47432006-47432025 | MS.gene073828:intron | 40.0% | |
| ATGTGTGATCTCTACTTCCA+GGG | + | chr1.3:47435176-47435195 | MS.gene073828:intron | 40.0% | |
| ATTAAGTGCTAACTGGCTGA+AGG | + | chr1.3:47433305-47433324 | MS.gene073828:intron | 40.0% | |
| CTAATCATCGTCTGAACTTG+GGG | + | chr1.3:47434862-47434881 | MS.gene073828:intron | 40.0% | |
| CTCAATGTCTTCTCTTGTGT+CGG | + | chr1.3:47432667-47432686 | MS.gene073828:intron | 40.0% | |
| GAAGGTCGCAGAGATTATAT+AGG | + | chr1.3:47433323-47433342 | MS.gene073828:intron | 40.0% | |
| GAGAGGAGTTGTTATGATGA+AGG | + | chr1.3:47432534-47432553 | MS.gene073828:CDS | 40.0% | |
| GCTAATCATCGTCTGAACTT+GGG | + | chr1.3:47434861-47434880 | MS.gene073828:intron | 40.0% | |
| GCTCGGAAACTACATTATAC+GGG | - | chr1.3:47433066-47433085 | None:intergenic | 40.0% | |
| GCTTAATCCCTTACTGTAGA+AGG | - | chr1.3:47435487-47435506 | None:intergenic | 40.0% | |
| GGATTTAGAGGTCAATGAGT+TGG | + | chr1.3:47433541-47433560 | MS.gene073828:intron | 40.0% | |
| GTAATCGTATGTGTCAGTGT+TGG | + | chr1.3:47431770-47431789 | MS.gene073828:intron | 40.0% | |
| TAAGAGGTAGTTGATCGATC+TGG | - | chr1.3:47431058-47431077 | None:intergenic | 40.0% | |
| TACTGGGAGGAAAGAGAATT+TGG | + | chr1.3:47431380-47431399 | MS.gene073828:CDS | 40.0% | |
| TAGTGTCAGTGTCAAACACT+AGG | + | chr1.3:47431982-47432001 | MS.gene073828:intron | 40.0% | |
| TATCCTGAGTCATGTGATGT+TGG | + | chr1.3:47434009-47434028 | MS.gene073828:intron | 40.0% | |
| TCCTCAGAAAGAGACTTACT+GGG | + | chr1.3:47432411-47432430 | MS.gene073828:CDS | 40.0% | |
| TGAACTTCAAAAACAGGGGT+CGG | - | chr1.3:47434208-47434227 | None:intergenic | 40.0% | |
| TGACACAGACACTTACATGT+CGG | - | chr1.3:47432086-47432105 | None:intergenic | 40.0% | |
| TGAGGTATATGGTGATCCTT+TGG | + | chr1.3:47432384-47432403 | MS.gene073828:CDS | 40.0% | |
| TGCATAATATATGCAAGGCC+CGG | + | chr1.3:47433187-47433206 | MS.gene073828:intron | 40.0% | |
| TGCTAATCATCGTCTGAACT+TGG | + | chr1.3:47434860-47434879 | MS.gene073828:intron | 40.0% | |
| TGGGGGAATGTTAATCCAAT+TGG | + | chr1.3:47432430-47432449 | MS.gene073828:CDS | 40.0% | |
| TGTTGTGCCTTCTACAGTAA+GGG | + | chr1.3:47435477-47435496 | MS.gene073828:intron | 40.0% | |
| TTATAATGAACAGGTGAGGC+AGG | - | chr1.3:47431501-47431520 | None:intergenic | 40.0% | |
| TTCATTTGTTTGGGAACCCT+AGG | + | chr1.3:47431403-47431422 | MS.gene073828:CDS | 40.0% | |
| TTGAATGAAGACGAAGGGAA+AGG | + | chr1.3:47435756-47435775 | MS.gene073828:CDS | 40.0% | |
| TTGTTGTGCCTTCTACAGTA+AGG | + | chr1.3:47435476-47435495 | MS.gene073828:intron | 40.0% | |
| ! | ATATCTGGTTTCCTCATGTG+TGG | - | chr1.3:47435645-47435664 | None:intergenic | 40.0% |
| ! | ATCAACTTGGTCTTTCGTTG+GGG | + | chr1.3:47433088-47433107 | MS.gene073828:intron | 40.0% |
| ! | CATTGACTGTATACGGTGAT+GGG | + | chr1.3:47434706-47434725 | MS.gene073828:CDS | 40.0% |
| ! | CGGATTTTGAATGAAGACGA+AGG | + | chr1.3:47435750-47435769 | MS.gene073828:CDS | 40.0% |
| ! | GCCCGAATTTTCAACACATA+TGG | + | chr1.3:47434515-47434534 | MS.gene073828:CDS | 40.0% |
| ! | GTTTACACTCGCTGACTAAA+TGG | - | chr1.3:47433273-47433292 | None:intergenic | 40.0% |
| ! | TCACTTTGGGAAAGTTGTCA+AGG | - | chr1.3:47434119-47434138 | None:intergenic | 40.0% |
| ! | TGTTGATCCGATTTTGCTTG+AGG | + | chr1.3:47431449-47431468 | MS.gene073828:CDS | 40.0% |
| !! | AAGCCTTATTCCACTAAGTG+GGG | - | chr1.3:47433622-47433641 | None:intergenic | 40.0% |
| !! | ATCCTCGTCGGAATTTTGAT+CGG | + | chr1.3:47431099-47431118 | MS.gene073828:CDS | 40.0% |
| !! | CAAGCCTTATTCCACTAAGT+GGG | - | chr1.3:47433623-47433642 | None:intergenic | 40.0% |
| !! | GGTTCGTTTTTACCTAGATC+TGG | + | chr1.3:47431177-47431196 | MS.gene073828:CDS | 40.0% |
| !! | TATGTGTCAGTGTTGGTGTT+AGG | + | chr1.3:47431777-47431796 | MS.gene073828:intron | 40.0% |
| !! | TCGCCGTTGTTGTTGTTTAA+TGG | + | chr1.3:47432211-47432230 | MS.gene073828:intron | 40.0% |
| !!! | AGATATCAGTGGTGGGTTTT+TGG | - | chr1.3:47434371-47434390 | None:intergenic | 40.0% |
| !!! | CGTGTGTGCTTCATTGATTT+TGG | - | chr1.3:47431027-47431046 | None:intergenic | 40.0% |
| AACCGATCAAAATTCCGACG+AGG | - | chr1.3:47431104-47431123 | None:intergenic | 45.0% | |
| ACATCTGCCATAGACAACAC+TGG | - | chr1.3:47434274-47434293 | None:intergenic | 45.0% | |
| AGAGGTAGTTGATCGATCTG+GGG | - | chr1.3:47431056-47431075 | None:intergenic | 45.0% | |
| AGCACCTCGATGATAATCCA+TGG | - | chr1.3:47432583-47432602 | None:intergenic | 45.0% | |
| CAGCCCATTAACCTGTGAAT+CGG | - | chr1.3:47435253-47435272 | None:intergenic | 45.0% | |
| CATAATATATGCAAGGCCCG+GGG | + | chr1.3:47433189-47433208 | MS.gene073828:intron | 45.0% | |
| CATGTTGGACCTTTCAACCT+GGG | + | chr1.3:47435294-47435313 | MS.gene073828:CDS | 45.0% | |
| CCACTTAGTGGAATAAGGCT+TGG | + | chr1.3:47433621-47433640 | MS.gene073828:intron | 45.0% | |
| CCATCACCGTATACAGTCAA+TGG | - | chr1.3:47434708-47434727 | None:intergenic | 45.0% | |
| CCATCATCTAAACACATGCG+GGG | - | chr1.3:47434542-47434561 | None:intergenic | 45.0% | |
| CCCATCATCTAAACACATGC+GGG | - | chr1.3:47434543-47434562 | None:intergenic | 45.0% | |
| CCCGCATGTGTTTAGATGAT+GGG | + | chr1.3:47434540-47434559 | MS.gene073828:CDS | 45.0% | |
| CCTCAGAAAGAGACTTACTG+GGG | + | chr1.3:47432412-47432431 | MS.gene073828:CDS | 45.0% | |
| CTAACATGGTGAATTCGCCT+GGG | - | chr1.3:47435323-47435342 | None:intergenic | 45.0% | |
| CTCAGAAAGAGACTTACTGG+GGG | + | chr1.3:47432413-47432432 | MS.gene073828:CDS | 45.0% | |
| CTCTGATGGTTAGCGATTTC+CGG | + | chr1.3:47435724-47435743 | MS.gene073828:CDS | 45.0% | |
| CTTATTCCACTAAGTGGGGT+CGG | - | chr1.3:47433618-47433637 | None:intergenic | 45.0% | |
| CTTCTAATGGAAGGCTTGTC+TGG | - | chr1.3:47432113-47432132 | None:intergenic | 45.0% | |
| GAACTTCAAAAACAGGGGTC+GGG | - | chr1.3:47434207-47434226 | None:intergenic | 45.0% | |
| GAAGACGTTGTTCTCGTAAG+AGG | - | chr1.3:47431074-47431093 | None:intergenic | 45.0% | |
| GATGTGTGATCTCTACTTCC+AGG | + | chr1.3:47435175-47435194 | MS.gene073828:intron | 45.0% | |
| GCATAATATATGCAAGGCCC+GGG | + | chr1.3:47433188-47433207 | MS.gene073828:intron | 45.0% | |
| GCCCATCATCTAAACACATG+CGG | - | chr1.3:47434544-47434563 | None:intergenic | 45.0% | |
| GGAACCAAAAATCCCACTGA+GGG | + | chr1.3:47435692-47435711 | MS.gene073828:CDS | 45.0% | |
| GGTTTACATGTCGACACTAG+TGG | + | chr1.3:47432027-47432046 | MS.gene073828:intron | 45.0% | |
| GTGTTGTCTATGGCAGATGT+CGG | + | chr1.3:47434274-47434293 | MS.gene073828:intron | 45.0% | |
| TAGCCAACATCACATGACTC+AGG | - | chr1.3:47434015-47434034 | None:intergenic | 45.0% | |
| TCAACGTGTCAGTATCGTGT+TGG | - | chr1.3:47431620-47431639 | None:intergenic | 45.0% | |
| TCTAACATGGTGAATTCGCC+TGG | - | chr1.3:47435324-47435343 | None:intergenic | 45.0% | |
| TGATGAAGGAAAGCGAACTG+CGG | + | chr1.3:47432548-47432567 | MS.gene073828:CDS | 45.0% | |
| TGGTTAGCGATTTCCGGAAT+CGG | + | chr1.3:47435730-47435749 | MS.gene073828:CDS | 45.0% | |
| TTAACTACCTGTGGCCTGTT+TGG | + | chr1.3:47432778-47432797 | MS.gene073828:intron | 45.0% | |
| TTCAAATCCAAACAGGCCAC+AGG | - | chr1.3:47432788-47432807 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr1.3:47433792-47433811 | None:intergenic | 45.0% |
| ! | ATGGATTATCATCGAGGTGC+TGG | + | chr1.3:47432582-47432601 | MS.gene073828:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr1.3:47433793-47433812 | None:intergenic | 45.0% |
| ! | CCATTGACTGTATACGGTGA+TGG | + | chr1.3:47434705-47434724 | MS.gene073828:CDS | 45.0% |
| ! | CTTGCCATGGATTATCATCG+AGG | + | chr1.3:47432576-47432595 | MS.gene073828:CDS | 45.0% |
| ! | TACCTGAGCAAGCTCTAACA+TGG | - | chr1.3:47435337-47435356 | None:intergenic | 45.0% |
| ! | TCTTTCTGAGGATGCTCCAA+AGG | - | chr1.3:47432403-47432422 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr1.3:47433160-47433179 | MS.gene073828:intron | 45.0% |
| ! | TTGATGGATGGTGAGCATGT+TGG | + | chr1.3:47435279-47435298 | MS.gene073828:CDS | 45.0% |
| ! | TTGGGGCTAGCAAAGAGAAT+CGG | + | chr1.3:47432334-47432353 | MS.gene073828:CDS | 45.0% |
| !! | CCAAGCCTTATTCCACTAAG+TGG | - | chr1.3:47433624-47433643 | None:intergenic | 45.0% |
| !! | GGGGTTTGTTGGAAGTCATT+TGG | + | chr1.3:47431305-47431324 | MS.gene073828:CDS | 45.0% |
| !! | TACCTAGATCTGGATTGGTC+CGG | + | chr1.3:47431187-47431206 | MS.gene073828:CDS | 45.0% |
| !!! | GGGTTTTTGGCTTTTCACCA+CGG | - | chr1.3:47434358-47434377 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTGGTGGTGGCCG+AGG | - | chr1.3:47433221-47433240 | None:intergenic | 45.0% |
| !!! | TAAAATAGATATTTTTTTTT+TGG | - | chr1.3:47433233-47433252 | None:intergenic | 5.0% |
| AACCGGACCAATCCAGATCT+AGG | - | chr1.3:47431192-47431211 | None:intergenic | 50.0% | |
| AACTGCGGAAACACTTGCCA+TGG | + | chr1.3:47432563-47432582 | MS.gene073828:CDS | 50.0% | |
| AAGGTGCATCCCTTAGAGTG+GGG | + | chr1.3:47431226-47431245 | MS.gene073828:CDS | 50.0% | |
| AGGTTGAGAGTGGTGGTTAC+TGG | + | chr1.3:47431276-47431295 | MS.gene073828:CDS | 50.0% | |
| ATGCTGCAAGAGTTCTTCCC+TGG | - | chr1.3:47435196-47435215 | None:intergenic | 50.0% | |
| ATGTCGGAGAGCCAAAATCC+TGG | + | chr1.3:47434290-47434309 | MS.gene073828:intron | 50.0% | |
| CCAAAAATCCCACTGAGGGA+AGG | + | chr1.3:47435696-47435715 | MS.gene073828:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr1.3:47433791-47433810 | MS.gene073828:intron | 50.0% | |
| CCATGGCAGATATCAGTGGT+GGG | - | chr1.3:47434378-47434397 | None:intergenic | 50.0% | |
| CCCCAGTAAGTCTCTTTCTG+AGG | - | chr1.3:47432415-47432434 | None:intergenic | 50.0% | |
| CCCCGCATGTGTTTAGATGA+TGG | + | chr1.3:47434539-47434558 | MS.gene073828:CDS | 50.0% | |
| CGACCCCACTTAGTGGAATA+AGG | + | chr1.3:47433616-47433635 | MS.gene073828:intron | 50.0% | |
| CGGAAATCGCTAACCATCAG+AGG | - | chr1.3:47435726-47435745 | None:intergenic | 50.0% | |
| CGTCTTCTCTTCATCCTCGT+CGG | + | chr1.3:47431087-47431106 | MS.gene073828:CDS | 50.0% | |
| CTCTAGACAAGCCTTCCATC+AGG | + | chr1.3:47431699-47431718 | MS.gene073828:intron | 50.0% | |
| CTGCTGATGATCCACACATG+AGG | + | chr1.3:47435631-47435650 | MS.gene073828:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1.3:47433788-47433807 | None:intergenic | 50.0% | |
| GCATGTTGGACCTTTCAACC+TGG | + | chr1.3:47435293-47435312 | MS.gene073828:CDS | 50.0% | |
| GCTTTCACGCATAAGTCCAC+CGG | + | chr1.3:47431149-47431168 | MS.gene073828:CDS | 50.0% | |
| GGGAACCAAAAATCCCACTG+AGG | + | chr1.3:47435691-47435710 | MS.gene073828:CDS | 50.0% | |
| GTAGTGTCCAACACTCCTGA+TGG | - | chr1.3:47431717-47431736 | None:intergenic | 50.0% | |
| GTAGTTGATCGATCTGGGGA+GGG | - | chr1.3:47431052-47431071 | None:intergenic | 50.0% | |
| GTGTCGTCAGATATTGGCCA+TGG | - | chr1.3:47434395-47434414 | None:intergenic | 50.0% | |
| TGGACTTATGCGTGAAAGCG+TGG | - | chr1.3:47431148-47431167 | None:intergenic | 50.0% | |
| TGTCCAACACTCCTGATGGA+AGG | - | chr1.3:47431713-47431732 | None:intergenic | 50.0% | |
| TTGAGAGTGGTGGTTACTGG+TGG | + | chr1.3:47431279-47431298 | MS.gene073828:CDS | 50.0% | |
| TTGGCCATGGCAGATATCAG+TGG | - | chr1.3:47434382-47434401 | None:intergenic | 50.0% | |
| ! | AAGCCTTCCATCAGGAGTGT+TGG | + | chr1.3:47431707-47431726 | MS.gene073828:intron | 50.0% |
| ! | CACCATGTTAGAGCTTGCTC+AGG | + | chr1.3:47435332-47435351 | MS.gene073828:CDS | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr1.3:47433794-47433813 | None:intergenic | 50.0% |
| ! | CCTTCCCTCAGTGGGATTTT+TGG | - | chr1.3:47435699-47435718 | None:intergenic | 50.0% |
| ! | CGATTCACAGGTTAATGGGC+TGG | + | chr1.3:47435251-47435270 | MS.gene073828:intron | 50.0% |
| ! | CGGTCAGTATGCCAGGATTT+TGG | - | chr1.3:47434304-47434323 | None:intergenic | 50.0% |
| ! | GAAGGTGCATCCCTTAGAGT+GGG | + | chr1.3:47431225-47431244 | MS.gene073828:CDS | 50.0% |
| ! | GGACTTATGCGTGAAAGCGT+GGG | - | chr1.3:47431147-47431166 | None:intergenic | 50.0% |
| ! | TGGGGCTAGCAAAGAGAATC+GGG | + | chr1.3:47432335-47432354 | MS.gene073828:CDS | 50.0% |
| ! | TTTTTGTCCCTCGTGTCTGC+AGG | + | chr1.3:47434668-47434687 | MS.gene073828:intron | 50.0% |
| !! | TAATGGGCTGGCAGCTTTGA+TGG | + | chr1.3:47435263-47435282 | MS.gene073828:CDS | 50.0% |
| AAGGGATGCACCTTCGTTGC+CGG | - | chr1.3:47431220-47431239 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1.3:47433610-47433629 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1.3:47433609-47433628 | MS.gene073828:intron | 55.0% | |
| CACATGTCGGTCAGTATGCC+AGG | - | chr1.3:47434311-47434330 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr1.3:47433158-47433177 | None:intergenic | 55.0% | |
| CCCACCACTGATATCTGCCA+TGG | + | chr1.3:47434375-47434394 | MS.gene073828:intron | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr1.3:47433155-47433174 | MS.gene073828:intron | 55.0% | |
| CCTTAGAGTGGGGAGGATTC+CGG | + | chr1.3:47431236-47431255 | MS.gene073828:CDS | 55.0% | |
| CCTTTCAACCTGGGTAACCC+AGG | + | chr1.3:47435303-47435322 | MS.gene073828:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1.3:47433786-47433805 | MS.gene073828:intron | 55.0% | |
| CGGAATCCTCCCCACTCTAA+GGG | - | chr1.3:47431238-47431257 | None:intergenic | 55.0% | |
| CGTATAGCCTGCAGACACGA+GGG | - | chr1.3:47434678-47434697 | None:intergenic | 55.0% | |
| CTGGCATACTGACCGACATG+TGG | + | chr1.3:47434309-47434328 | MS.gene073828:intron | 55.0% | |
| CTTCGTTGCCGGAGTTGAAC+CGG | - | chr1.3:47431209-47431228 | None:intergenic | 55.0% | |
| GCCATGGCAGATATCAGTGG+TGG | - | chr1.3:47434379-47434398 | None:intergenic | 55.0% | |
| GGTAAAAACGAACCGGCCTC+CGG | - | chr1.3:47431171-47431190 | None:intergenic | 55.0% | |
| GGTAGTTGATCGATCTGGGG+AGG | - | chr1.3:47431053-47431072 | None:intergenic | 55.0% | |
| TAGCAAAGAGAATCGGGGCG+AGG | + | chr1.3:47432341-47432360 | MS.gene073828:CDS | 55.0% | |
| TGAATTCGCCTGGGTTACCC+AGG | - | chr1.3:47435314-47435333 | None:intergenic | 55.0% | |
| TTCACGCATAAGTCCACCGG+AGG | + | chr1.3:47431152-47431171 | MS.gene073828:CDS | 55.0% | |
| TTTCACCACGGCGCCATACT+CGG | - | chr1.3:47434346-47434365 | None:intergenic | 55.0% | |
| ! | AGTGGTGGTTACTGGTGGTG+CGG | + | chr1.3:47431284-47431303 | MS.gene073828:CDS | 55.0% |
| ! | CCTGGGTTACCCAGGTTGAA+AGG | - | chr1.3:47435306-47435325 | None:intergenic | 55.0% |
| ! | CGAAGGTGCATCCCTTAGAG+TGG | + | chr1.3:47431224-47431243 | MS.gene073828:CDS | 55.0% |
| ! | GGGGCTAGCAAAGAGAATCG+GGG | + | chr1.3:47432336-47432355 | MS.gene073828:CDS | 55.0% |
| !! | GGATTGGTCCGGTTCAACTC+CGG | + | chr1.3:47431198-47431217 | MS.gene073828:CDS | 55.0% |
| AAAAACGAACCGGCCTCCGG+TGG | - | chr1.3:47431168-47431187 | None:intergenic | 60.0% | |
| AAGGCCCGGGGTTCAAACCT+CGG | + | chr1.3:47433201-47433220 | MS.gene073828:intron | 60.0% | |
| ACTAAGTGGGGTCGGCTACC+TGG | - | chr1.3:47433780-47433799 | None:intergenic | 60.0% | |
| AGAGGCAGACCTTCCCTCAG+TGG | - | chr1.3:47435708-47435727 | None:intergenic | 60.0% | |
| AGGATTCCGGCGGGAATTGG+TGG | + | chr1.3:47431249-47431268 | MS.gene073828:CDS | 60.0% | |
| AGGTAGCCGACCCCACTTAG+TGG | + | chr1.3:47433779-47433798 | MS.gene073828:intron | 60.0% | |
| CACGGCGCCATACTCGGATA+TGG | - | chr1.3:47434340-47434359 | None:intergenic | 60.0% | |
| CATATCCGAGTATGGCGCCG+TGG | + | chr1.3:47434338-47434357 | MS.gene073828:intron | 60.0% | |
| CCGGAATCCTCCCCACTCTA+AGG | - | chr1.3:47431239-47431258 | None:intergenic | 60.0% | |
| CGGTTCAACTCCGGCAACGA+AGG | + | chr1.3:47431207-47431226 | MS.gene073828:CDS | 60.0% | |
| GAGGCAGACCTTCCCTCAGT+GGG | - | chr1.3:47435707-47435726 | None:intergenic | 60.0% | |
| GAGGGAAGGTCTGCCTCTGA+TGG | + | chr1.3:47435710-47435729 | MS.gene073828:CDS | 60.0% | |
| GATATGGCGGCGCCACATGT+CGG | - | chr1.3:47434324-47434343 | None:intergenic | 60.0% | |
| GCGTATAGCCTGCAGACACG+AGG | - | chr1.3:47434679-47434698 | None:intergenic | 60.0% | |
| GGCGCCATACTCGGATATGG+CGG | - | chr1.3:47434337-47434356 | None:intergenic | 60.0% | |
| GGTAGCCGACCCCACTTAGT+GGG | + | chr1.3:47433780-47433799 | MS.gene073828:intron | 60.0% | |
| GTGCATCCCTTAGAGTGGGG+AGG | + | chr1.3:47431229-47431248 | MS.gene073828:CDS | 60.0% | |
| TAGAGTGGGGAGGATTCCGG+CGG | + | chr1.3:47431239-47431258 | MS.gene073828:CDS | 60.0% | |
| TGGTCGGAGGTTGAGAGTGG+TGG | + | chr1.3:47431269-47431288 | MS.gene073828:CDS | 60.0% | |
| TGGTGGTCGGAGGTTGAGAG+TGG | + | chr1.3:47431266-47431285 | MS.gene073828:CDS | 60.0% | |
| ! | ACTGGTGGTGCGGGGTTTGT+TGG | + | chr1.3:47431294-47431313 | MS.gene073828:CDS | 60.0% |
| ! | GGGCTGGCAGCTTTGATGGA+TGG | + | chr1.3:47435267-47435286 | MS.gene073828:CDS | 60.0% |
| ! | GTGGTGGTTACTGGTGGTGC+GGG | + | chr1.3:47431285-47431304 | MS.gene073828:CDS | 60.0% |
| ! | TGGTGGTTACTGGTGGTGCG+GGG | + | chr1.3:47431286-47431305 | MS.gene073828:CDS | 60.0% |
| ! | TTCCGGCGGGAATTGGTGGT+CGG | + | chr1.3:47431253-47431272 | MS.gene073828:CDS | 60.0% |
| !! | TCATCGAGGTGCTGGCGTTG+AGG | + | chr1.3:47432590-47432609 | MS.gene073828:CDS | 60.0% |
| AGAGTGGGGAGGATTCCGGC+GGG | + | chr1.3:47431240-47431259 | MS.gene073828:CDS | 65.0% | |
| AGGGGTCGGGTGCACAAGAG+TGG | - | chr1.3:47434194-47434213 | None:intergenic | 65.0% | |
| CGCATAAGTCCACCGGAGGC+CGG | + | chr1.3:47431156-47431175 | MS.gene073828:CDS | 65.0% | |
| CTCCGACCACCAATTCCCGC+CGG | - | chr1.3:47431258-47431277 | None:intergenic | 65.0% | |
| GGCGCCGCCATATCCGAGTA+TGG | + | chr1.3:47434330-47434349 | MS.gene073828:intron | 65.0% | |
| GGGAGGATTCCGGCGGGAAT+TGG | + | chr1.3:47431246-47431265 | MS.gene073828:CDS | 65.0% | |
| GGGGTCGGGTGCACAAGAGT+GGG | - | chr1.3:47434193-47434212 | None:intergenic | 65.0% | |
| GGGTCGGGTGCACAAGAGTG+GGG | - | chr1.3:47434192-47434211 | None:intergenic | 65.0% | |
| GGTCGGGTGCACAAGAGTGG+GGG | - | chr1.3:47434191-47434210 | None:intergenic | 65.0% | |
| GGTGGCCGAGGTTTGAACCC+CGG | - | chr1.3:47433209-47433228 | None:intergenic | 65.0% | |
| GTGGCCGAGGTTTGAACCCC+GGG | - | chr1.3:47433208-47433227 | None:intergenic | 65.0% | |
| ! | CGGCGGGAATTGGTGGTCGG+AGG | + | chr1.3:47431256-47431275 | MS.gene073828:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 47430997 | 47435788 | 47430997 | ID=MS.gene073828 |
| chr1.3 | mRNA | 47430997 | 47435788 | 47430997 | ID=MS.gene073828.t1;Parent=MS.gene073828 |
| chr1.3 | exon | 47430997 | 47431509 | 47430997 | ID=MS.gene073828.t1.exon1;Parent=MS.gene073828.t1 |
| chr1.3 | CDS | 47430997 | 47431509 | 47430997 | ID=cds.MS.gene073828.t1;Parent=MS.gene073828.t1 |
| chr1.3 | exon | 47432307 | 47432451 | 47432307 | ID=MS.gene073828.t1.exon2;Parent=MS.gene073828.t1 |
| chr1.3 | CDS | 47432307 | 47432451 | 47432307 | ID=cds.MS.gene073828.t1;Parent=MS.gene073828.t1 |
| chr1.3 | exon | 47432532 | 47432611 | 47432532 | ID=MS.gene073828.t1.exon3;Parent=MS.gene073828.t1 |
| chr1.3 | CDS | 47432532 | 47432611 | 47432532 | ID=cds.MS.gene073828.t1;Parent=MS.gene073828.t1 |
| chr1.3 | exon | 47434506 | 47434589 | 47434506 | ID=MS.gene073828.t1.exon4;Parent=MS.gene073828.t1 |
| chr1.3 | CDS | 47434506 | 47434589 | 47434506 | ID=cds.MS.gene073828.t1;Parent=MS.gene073828.t1 |
| chr1.3 | exon | 47434690 | 47434764 | 47434690 | ID=MS.gene073828.t1.exon5;Parent=MS.gene073828.t1 |
| chr1.3 | CDS | 47434690 | 47434764 | 47434690 | ID=cds.MS.gene073828.t1;Parent=MS.gene073828.t1 |
| chr1.3 | exon | 47435261 | 47435353 | 47435261 | ID=MS.gene073828.t1.exon6;Parent=MS.gene073828.t1 |
| chr1.3 | CDS | 47435261 | 47435353 | 47435261 | ID=cds.MS.gene073828.t1;Parent=MS.gene073828.t1 |
| chr1.3 | exon | 47435579 | 47435788 | 47435579 | ID=MS.gene073828.t1.exon7;Parent=MS.gene073828.t1 |
| chr1.3 | CDS | 47435579 | 47435788 | 47435579 | ID=cds.MS.gene073828.t1;Parent=MS.gene073828.t1 |
| Gene Sequence |
| Protein sequence |