Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074039.t1 | XP_003613633.1 | 100 | 332 | 0 | 0 | 1 | 332 | 1 | 332 | 2.10E-192 | 681.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074039.t1 | Q9M9S6 | 88.5 | 331 | 38 | 0 | 1 | 331 | 1 | 331 | 1.8e-176 | 619.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074039.t1 | Q2HTW1 | 100.0 | 332 | 0 | 0 | 1 | 332 | 1 | 332 | 1.5e-192 | 681.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06113 | MS.gene074039 | 0.823637 | 1.24E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074039.t1 | MTR_5g038900 | 100.000 | 332 | 0 | 0 | 1 | 332 | 1 | 332 | 0.0 | 679 |
| MS.gene074039.t1 | MTR_2g096300 | 32.550 | 298 | 195 | 4 | 16 | 311 | 28 | 321 | 1.19e-35 | 132 |
| MS.gene074039.t1 | MTR_4g063040 | 30.794 | 315 | 196 | 5 | 14 | 318 | 27 | 329 | 1.38e-32 | 124 |
| MS.gene074039.t1 | MTR_7g076310 | 24.756 | 307 | 200 | 9 | 17 | 315 | 27 | 310 | 1.90e-15 | 76.6 |
| MS.gene074039.t1 | MTR_7g076310 | 26.250 | 240 | 161 | 6 | 81 | 315 | 58 | 286 | 3.72e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074039.t1 | AT1G14360 | 88.520 | 331 | 38 | 0 | 1 | 331 | 1 | 331 | 0.0 | 602 |
| MS.gene074039.t1 | AT2G02810 | 83.434 | 332 | 55 | 0 | 1 | 332 | 1 | 332 | 0.0 | 568 |
| MS.gene074039.t1 | AT3G46180 | 30.769 | 325 | 212 | 4 | 15 | 331 | 21 | 340 | 1.53e-31 | 121 |
| MS.gene074039.t1 | AT5G59740 | 31.429 | 315 | 208 | 3 | 15 | 326 | 20 | 329 | 4.24e-30 | 117 |
| MS.gene074039.t1 | AT3G46180 | 32.472 | 271 | 173 | 4 | 15 | 281 | 21 | 285 | 1.35e-27 | 109 |
| MS.gene074039.t1 | AT1G12600 | 25.828 | 302 | 195 | 9 | 17 | 311 | 29 | 308 | 4.08e-17 | 81.6 |
| MS.gene074039.t1 | AT4G23010 | 28.922 | 204 | 132 | 5 | 102 | 302 | 102 | 295 | 3.51e-15 | 75.9 |
| MS.gene074039.t1 | AT4G23010 | 27.727 | 220 | 131 | 7 | 102 | 302 | 102 | 312 | 2.03e-13 | 70.9 |
Find 90 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGTTGGGCATGAATTTA+TGG | 0.164255 | 5.1:+29363340 | MS.gene074039:CDS |
| GTGCTCCTTGGTGGTCTTAT+TGG | 0.176225 | 5.1:+29360204 | MS.gene074039:CDS |
| CCAAATGCTCCTCTTGGATA+TGG | 0.204631 | 5.1:+29362488 | MS.gene074039:CDS |
| AGGAAGGTACAAAGGTATTC+TGG | 0.244279 | 5.1:-29362292 | None:intergenic |
| CTTTGTACCTTCCTTGTTGC+TGG | 0.252082 | 5.1:+29362301 | MS.gene074039:CDS |
| AGAACGTGGTTTGTTTAATT+TGG | 0.267247 | 5.1:+29359543 | MS.gene074039:CDS |
| AAAATATCCCATGCTGCTTC+TGG | 0.276882 | 5.1:-29363444 | None:intergenic |
| CCTTCTGCGTCGCCGGAATC+TGG | 0.296006 | 5.1:+29359324 | MS.gene074039:CDS |
| TATGTTGGGCATGAATTTAT+GGG | 0.345961 | 5.1:+29363341 | MS.gene074039:CDS |
| ATCTGGGGTGGTGGAAATAC+TGG | 0.354736 | 5.1:+29360179 | MS.gene074039:CDS |
| CTTCAATGCAGTTATGTTGA+TGG | 0.358209 | 5.1:+29362237 | MS.gene074039:intron |
| AATATACGCCGACCAGATTC+CGG | 0.360790 | 5.1:-29359336 | None:intergenic |
| TTCTTGACTATAAGCCGGTT+TGG | 0.375249 | 5.1:+29363507 | MS.gene074039:CDS |
| CATGTAAATCATATTGTATA+TGG | 0.377775 | 5.1:-29363367 | None:intergenic |
| TTCAGGTCAACGAAGCGATT+TGG | 0.380895 | 5.1:+29359473 | MS.gene074039:intron |
| TATTTACCAAGGCATTCTTC+AGG | 0.383876 | 5.1:+29359355 | MS.gene074039:CDS |
| GCTGGAATTACTAATACTAT+TGG | 0.396641 | 5.1:+29360230 | MS.gene074039:CDS |
| TCCCCTTTCAACAAAGCAAT+GGG | 0.410772 | 5.1:+29363605 | MS.gene074039:CDS |
| TTCATCATTTGCACTTCTAA+AGG | 0.417139 | 5.1:+29362330 | MS.gene074039:CDS |
| TGTGTTACTATGGTATTCTC+TGG | 0.427170 | 5.1:+29363630 | MS.gene074039:CDS |
| TGGTGGTCTTATTGGAGTGC+TGG | 0.428422 | 5.1:+29360212 | MS.gene074039:CDS |
| GAAATACTGGTGGTGCTCCT+TGG | 0.431303 | 5.1:+29360192 | MS.gene074039:CDS |
| TTGATGGGTTCACTCGTATA+CGG | 0.431609 | 5.1:+29362253 | MS.gene074039:CDS |
| TATGTGTAGTGATAAAGATC+TGG | 0.434418 | 5.1:+29360162 | MS.gene074039:intron |
| TAATACTATTGGTCCTGCTA+TGG | 0.436414 | 5.1:+29360241 | MS.gene074039:CDS |
| CCATATCCAAGAGGAGCATT+TGG | 0.439599 | 5.1:-29362488 | None:intergenic |
| GTCCTCGCCTTCTGCGTCGC+CGG | 0.445892 | 5.1:+29359317 | MS.gene074039:CDS |
| GGAAGGTACAAAGGTATTCT+GGG | 0.451346 | 5.1:-29362291 | None:intergenic |
| GCACATCCAAATGCTCCTCT+TGG | 0.463943 | 5.1:+29362482 | MS.gene074039:CDS |
| CAAATGCTCCTCTTGGATAT+GGG | 0.465849 | 5.1:+29362489 | MS.gene074039:CDS |
| TTCAATGCAGTTATGTTGAT+GGG | 0.470619 | 5.1:+29362238 | MS.gene074039:intron |
| AGTGCTTGGGGTATTATGTT+GGG | 0.470779 | 5.1:+29363327 | MS.gene074039:CDS |
| TCTGCCACTTGAGGTAGATC+TGG | 0.486763 | 5.1:-29363662 | None:intergenic |
| GCCAAGTGGTAGTGGATATG+AGG | 0.489109 | 5.1:+29363398 | MS.gene074039:CDS |
| GTGATAAAGATCTGGGGTGG+TGG | 0.491170 | 5.1:+29360170 | MS.gene074039:intron |
| AAGTGCTTGGGGTATTATGT+TGG | 0.492767 | 5.1:+29363326 | MS.gene074039:CDS |
| ATACTGGTGGTGCTCCTTGG+TGG | 0.493880 | 5.1:+29360195 | MS.gene074039:CDS |
| GTATATTAGTTACCCTGCTC+AGG | 0.494178 | 5.1:+29360280 | MS.gene074039:CDS |
| AAAGCTTCAATTCCCATAGC+AGG | 0.502581 | 5.1:-29360254 | None:intergenic |
| TGTTAGCTAAAGAGCCAAAC+CGG | 0.504636 | 5.1:-29363521 | None:intergenic |
| TTATATTCTTGACTATAAGC+CGG | 0.511449 | 5.1:+29363502 | MS.gene074039:CDS |
| CGACGCAGAAGGCGAGGACA+AGG | 0.518457 | 5.1:-29359313 | None:intergenic |
| ATGTGTAGTGATAAAGATCT+GGG | 0.519385 | 5.1:+29360163 | MS.gene074039:intron |
| TTTGAACTTGGCGCAGAACG+TGG | 0.519954 | 5.1:+29359529 | MS.gene074039:CDS |
| CTTGCTGATAGTCTTTGAGC+TGG | 0.522206 | 5.1:-29362456 | None:intergenic |
| AATACTATTGGTCCTGCTAT+GGG | 0.523343 | 5.1:+29360242 | MS.gene074039:CDS |
| CCCCATTGCTTTGTTGAAAG+GGG | 0.523889 | 5.1:-29363606 | None:intergenic |
| ATATGATTTACATGTTTGCA+TGG | 0.526096 | 5.1:+29363376 | MS.gene074039:CDS |
| GTATTGCTGCTGTGGTGCTG+TGG | 0.533005 | 5.1:+29363470 | MS.gene074039:CDS |
| TTTGCATGGCCAAGTGGTAG+TGG | 0.534136 | 5.1:+29363390 | MS.gene074039:CDS |
| ATCCCCTTTCAACAAAGCAA+TGG | 0.537351 | 5.1:+29363604 | MS.gene074039:CDS |
| CCAGATTCCGGCGACGCAGA+AGG | 0.547977 | 5.1:-29359324 | None:intergenic |
| CTCAAAGACTATCAGCAAGC+TGG | 0.553037 | 5.1:+29362460 | MS.gene074039:CDS |
| TATTGCTGCTGTGGTGCTGT+GGG | 0.554263 | 5.1:+29363471 | MS.gene074039:CDS |
| TTAATGGAAGCTCACGGCGG+AGG | 0.556627 | 5.1:+29359278 | None:intergenic |
| ACAACATCCAGAAGCAGCAT+GGG | 0.564204 | 5.1:+29363437 | MS.gene074039:CDS |
| TGTACCTTCCTTGTTGCTGG+AGG | 0.565023 | 5.1:+29362304 | MS.gene074039:CDS |
| AACAACATCCAGAAGCAGCA+TGG | 0.568553 | 5.1:+29363436 | MS.gene074039:CDS |
| CCCTTTCAACAAAGCAATGG+GGG | 0.570305 | 5.1:+29363607 | MS.gene074039:CDS |
| AGAAGGCGAGGACAAGGATG+CGG | 0.571349 | 5.1:-29359307 | None:intergenic |
| CCCAGGATTCCTTAAAAGCA+AGG | 0.572578 | 5.1:+29362555 | MS.gene074039:CDS |
| TTCCGGCGACGCAGAAGGCG+AGG | 0.572738 | 5.1:-29359319 | None:intergenic |
| GTGTTTCCTGAAGAATGCCT+TGG | 0.578829 | 5.1:-29359361 | None:intergenic |
| TGGATTTACTAATGCAACCC+AGG | 0.581751 | 5.1:+29362538 | MS.gene074039:CDS |
| TGGTATCTTCACTATTGAGT+GGG | 0.586928 | 5.1:+29363580 | MS.gene074039:CDS |
| ATGTTGGGCATGAATTTATG+GGG | 0.591007 | 5.1:+29363342 | MS.gene074039:CDS |
| TGGGGTGGTGGAAATACTGG+TGG | 0.597101 | 5.1:+29360182 | MS.gene074039:CDS |
| AGGCGAGGACAAGGATGCGG+CGG | 0.600199 | 5.1:-29359304 | None:intergenic |
| CATACCAGATCTACCTCAAG+TGG | 0.602281 | 5.1:+29363658 | MS.gene074039:CDS |
| GCCTCATATCCACTACCACT+TGG | 0.602799 | 5.1:-29363399 | None:intergenic |
| TCTGCAACTTCTGCCACTTG+AGG | 0.603062 | 5.1:-29363671 | None:intergenic |
| AAATTTGCGAGTGGTAGTGA+TGG | 0.603630 | 5.1:-29363547 | None:intergenic |
| TAGTAAATCCATCAAAAGCA+AGG | 0.603971 | 5.1:-29362526 | None:intergenic |
| CTGCGTCGCCGGAATCTGGT+CGG | 0.615572 | 5.1:+29359328 | MS.gene074039:CDS |
| GTGGTATCTTCACTATTGAG+TGG | 0.618540 | 5.1:+29363579 | MS.gene074039:CDS |
| GGTACAAAGGTATTCTGGGA+TGG | 0.626831 | 5.1:-29362287 | None:intergenic |
| CAGCAACAAGGAAGGTACAA+AGG | 0.630883 | 5.1:-29362300 | None:intergenic |
| ATGAAACACCTCCAGCAACA+AGG | 0.652025 | 5.1:-29362312 | None:intergenic |
| AACACCTCCAGCAACAAGGA+AGG | 0.653676 | 5.1:-29362308 | None:intergenic |
| TACATGTTTGCATGGCCAAG+TGG | 0.656810 | 5.1:+29363384 | MS.gene074039:CDS |
| GATGCTTACAAATTTGCGAG+TGG | 0.674536 | 5.1:-29363556 | None:intergenic |
| CCCCTTTCAACAAAGCAATG+GGG | 0.674603 | 5.1:+29363606 | MS.gene074039:CDS |
| TGGTCGGCGTATATTTACCA+AGG | 0.679374 | 5.1:+29359344 | MS.gene074039:CDS |
| AAACATAGCCCATATCCAAG+AGG | 0.688551 | 5.1:-29362497 | None:intergenic |
| CTCGCTTTAATGGAAGCTCA+CGG | 0.709865 | 5.1:+29359272 | None:intergenic |
| TCGCAAATTTGTAAGCATCG+TGG | 0.735594 | 5.1:+29363560 | MS.gene074039:CDS |
| GCTTTAATGGAAGCTCACGG+CGG | 0.743316 | 5.1:+29359275 | None:intergenic |
| GCACTCCAATAAGACCACCA+AGG | 0.754915 | 5.1:-29360209 | None:intergenic |
| TGTGTAGTGATAAAGATCTG+GGG | 0.762885 | 5.1:+29360164 | MS.gene074039:intron |
| GTAGTGATAAAGATCTGGGG+TGG | 0.767595 | 5.1:+29360167 | MS.gene074039:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAGTATTAAGATTTG+AGG | + | chr5.1:29361259-29361278 | MS.gene074039:intron | 15.0% |
| !! | GTATAATAATTTGATACAAT+TGG | + | chr5.1:29361655-29361674 | MS.gene074039:intron | 15.0% |
| !!! | CATTAGTTATTTAGTTTTTT+GGG | + | chr5.1:29362055-29362074 | MS.gene074039:intron | 15.0% |
| !!! | GTGTAATTTTGATTTTTTTT+TGG | + | chr5.1:29360127-29360146 | MS.gene074039:intron | 15.0% |
| !!! | TTTTAACTTAAGCATTTATA+AGG | - | chr5.1:29361227-29361246 | None:intergenic | 15.0% |
| !! | AAAACATAAAAAGGAACAAT+TGG | - | chr5.1:29359964-29359983 | None:intergenic | 20.0% |
| !! | AACAATTAATCATGATTAGT+GGG | + | chr5.1:29360913-29360932 | MS.gene074039:intron | 20.0% |
| !! | AAGATAGAGAAAACATAAAA+AGG | - | chr5.1:29359973-29359992 | None:intergenic | 20.0% |
| !! | AGTTAATTAATGTGTAAAGT+TGG | + | chr5.1:29360105-29360124 | MS.gene074039:intron | 20.0% |
| !! | ATTGAATTGAAAAATTGTTG+TGG | + | chr5.1:29359406-29359425 | MS.gene074039:intron | 20.0% |
| !! | CATAACTTAACATGAAATTA+TGG | - | chr5.1:29362734-29362753 | None:intergenic | 20.0% |
| !! | CATGTAAATCATATTGTATA+TGG | - | chr5.1:29363370-29363389 | None:intergenic | 20.0% |
| !! | CTTTAGCATTTAAACAAAAT+TGG | + | chr5.1:29361861-29361880 | MS.gene074039:intron | 20.0% |
| !! | TAAGACACATAAAAATGATA+TGG | - | chr5.1:29361501-29361520 | None:intergenic | 20.0% |
| !! | TAGATAGTTAATTCAATTCA+CGG | + | chr5.1:29359761-29359780 | MS.gene074039:intron | 20.0% |
| !! | TGATATATTACATAGAATCA+AGG | + | chr5.1:29360511-29360530 | MS.gene074039:intron | 20.0% |
| !! | TGATTCTATGTAATATATCA+AGG | - | chr5.1:29360511-29360530 | None:intergenic | 20.0% |
| !!! | GCATTAGTTATTTAGTTTTT+TGG | + | chr5.1:29362054-29362073 | MS.gene074039:intron | 20.0% |
| !!! | GTTTAAAAATTTTAGGGTTT+TGG | - | chr5.1:29361051-29361070 | None:intergenic | 20.0% |
| !!! | TATTGAATTCTTTTGTGATT+TGG | + | chr5.1:29359448-29359467 | MS.gene074039:intron | 20.0% |
| !!! | TCTCAATTTTAATAATCCAA+CGG | + | chr5.1:29361830-29361849 | MS.gene074039:intron | 20.0% |
| !!! | TGTTTTAGAGAATTCTATAA+TGG | - | chr5.1:29361422-29361441 | None:intergenic | 20.0% |
| ! | AAAATGTTGAGATTTGAGAA+AGG | - | chr5.1:29363196-29363215 | None:intergenic | 25.0% |
| ! | AAATTCATCATCAGATTATG+TGG | + | chr5.1:29362184-29362203 | MS.gene074039:intron | 25.0% |
| ! | AACTTAAGCATTTATAAGGA+AGG | - | chr5.1:29361223-29361242 | None:intergenic | 25.0% |
| ! | AATTGTATAGTCGTAAACTA+TGG | + | chr5.1:29360320-29360339 | MS.gene074039:intron | 25.0% |
| ! | ACATTCAAACACAAATGAAA+CGG | - | chr5.1:29363171-29363190 | None:intergenic | 25.0% |
| ! | AGAAAATGAAATTCATCTAC+AGG | - | chr5.1:29361813-29361832 | None:intergenic | 25.0% |
| ! | AGTCATTAGAGCTAAAAAAT+TGG | + | chr5.1:29360409-29360428 | MS.gene074039:intron | 25.0% |
| ! | ATATGATTTACATGTTTGCA+TGG | + | chr5.1:29363376-29363395 | MS.gene074039:CDS | 25.0% |
| ! | CAACAATTAATCATGATTAG+TGG | + | chr5.1:29360912-29360931 | MS.gene074039:intron | 25.0% |
| ! | CATCCTAAATAAAGATTCAT+TGG | + | chr5.1:29363247-29363266 | MS.gene074039:intron | 25.0% |
| ! | GATCAGAAATTATTCAGATT+AGG | - | chr5.1:29362777-29362796 | None:intergenic | 25.0% |
| ! | GTATGGGATTATAATAAAAG+TGG | + | chr5.1:29360342-29360361 | MS.gene074039:intron | 25.0% |
| ! | TACTTGATAGATGAATTGAA+AGG | - | chr5.1:29362839-29362858 | None:intergenic | 25.0% |
| ! | TAGTCGTTAAATGTCTTTAT+TGG | + | chr5.1:29362888-29362907 | MS.gene074039:intron | 25.0% |
| ! | TATATATGTAATCCCAAGTT+TGG | - | chr5.1:29360773-29360792 | None:intergenic | 25.0% |
| ! | TCTTTAAATGGTTTCACTAT+TGG | + | chr5.1:29361303-29361322 | MS.gene074039:intron | 25.0% |
| ! | TTATATTCTTGACTATAAGC+CGG | + | chr5.1:29363502-29363521 | MS.gene074039:CDS | 25.0% |
| ! | TTTATGACACTTCTAATCAA+AGG | - | chr5.1:29359700-29359719 | None:intergenic | 25.0% |
| !! | AGACCAATGAATCTTTATTT+AGG | - | chr5.1:29363253-29363272 | None:intergenic | 25.0% |
| !! | ATTTTTAAACCGGATTAACT+AGG | + | chr5.1:29359788-29359807 | MS.gene074039:intron | 25.0% |
| !! | CATTTTTCACATATTATCAG+CGG | - | chr5.1:29359634-29359653 | None:intergenic | 25.0% |
| !! | GTATTAAGATTTGAGGTAAA+AGG | + | chr5.1:29361266-29361285 | MS.gene074039:intron | 25.0% |
| !! | TCATTTTCTCTGATTGTTAT+TGG | + | chr5.1:29360049-29360068 | MS.gene074039:intron | 25.0% |
| !! | TCTCAAATCTCAACATTTTT+AGG | + | chr5.1:29363197-29363216 | MS.gene074039:intron | 25.0% |
| !!! | ATATAGTTTTTTCAGTTACC+AGG | + | chr5.1:29361005-29361024 | MS.gene074039:intron | 25.0% |
| !!! | ATTGTATTACCTTGCTTTTA+AGG | - | chr5.1:29362567-29362586 | None:intergenic | 25.0% |
| !!! | CCACTGGTTTAAAAATTTTA+GGG | - | chr5.1:29361057-29361076 | None:intergenic | 25.0% |
| !!! | TCCACTGGTTTAAAAATTTT+AGG | - | chr5.1:29361058-29361077 | None:intergenic | 25.0% |
| AAATGACATTTAACACGTGT+CGG | - | chr5.1:29360035-29360054 | None:intergenic | 30.0% | |
| ACAAGACCTATATAAAATCC+TGG | - | chr5.1:29360482-29360501 | None:intergenic | 30.0% | |
| AGCAAAAATCACAAATCACA+AGG | - | chr5.1:29363093-29363112 | None:intergenic | 30.0% | |
| ATAAAAATGATATGGCATGC+GGG | - | chr5.1:29361493-29361512 | None:intergenic | 30.0% | |
| ATAGTCGTAAACTATGGTAT+GGG | + | chr5.1:29360326-29360345 | MS.gene074039:intron | 30.0% | |
| ATGTGTAGTGATAAAGATCT+GGG | + | chr5.1:29360163-29360182 | MS.gene074039:intron | 30.0% | |
| ATGTTGTAAGTCTGTAGATT+TGG | - | chr5.1:29362954-29362973 | None:intergenic | 30.0% | |
| CAATTAAATCGCAGAAAGTT+GGG | + | chr5.1:29360965-29360984 | MS.gene074039:intron | 30.0% | |
| CATAAAAATGATATGGCATG+CGG | - | chr5.1:29361494-29361513 | None:intergenic | 30.0% | |
| CATACTTTAATCGTGATTAG+TGG | + | chr5.1:29360821-29360840 | MS.gene074039:intron | 30.0% | |
| CGTTAAATGTCTTTATTGGA+TGG | + | chr5.1:29362892-29362911 | MS.gene074039:intron | 30.0% | |
| GATGGAGATAAGTTCAATAT+TGG | + | chr5.1:29362910-29362929 | MS.gene074039:intron | 30.0% | |
| GCAAAAATCACAAATCACAA+GGG | - | chr5.1:29363092-29363111 | None:intergenic | 30.0% | |
| GCATCATGAATCATTGTATT+GGG | + | chr5.1:29360882-29360901 | MS.gene074039:intron | 30.0% | |
| GCTATATGCCAAAATCAAAA+GGG | - | chr5.1:29362602-29362621 | None:intergenic | 30.0% | |
| GCTGGAATTACTAATACTAT+TGG | + | chr5.1:29360230-29360249 | MS.gene074039:CDS | 30.0% | |
| GTTAATCGCATGCAAAAATA+TGG | + | chr5.1:29359724-29359743 | MS.gene074039:intron | 30.0% | |
| TAAATTGTGAGATCGTAACA+TGG | + | chr5.1:29360713-29360732 | MS.gene074039:intron | 30.0% | |
| TACTCTTGTCTAAACTTACA+TGG | + | chr5.1:29362391-29362410 | MS.gene074039:intron | 30.0% | |
| TAGTAAATCCATCAAAAGCA+AGG | - | chr5.1:29362529-29362548 | None:intergenic | 30.0% | |
| TATAGTCGTAAACTATGGTA+TGG | + | chr5.1:29360325-29360344 | MS.gene074039:intron | 30.0% | |
| TATGTGTAGTGATAAAGATC+TGG | + | chr5.1:29360162-29360181 | MS.gene074039:intron | 30.0% | |
| TATGTTGGGCATGAATTTAT+GGG | + | chr5.1:29363341-29363360 | MS.gene074039:CDS | 30.0% | |
| TGCATCATGAATCATTGTAT+TGG | + | chr5.1:29360881-29360900 | MS.gene074039:intron | 30.0% | |
| TGCTATATGCCAAAATCAAA+AGG | - | chr5.1:29362603-29362622 | None:intergenic | 30.0% | |
| TGGTAGACAGTAATTATACA+TGG | - | chr5.1:29359944-29359963 | None:intergenic | 30.0% | |
| TGTTCAAATGTCTTTAGCAT+AGG | + | chr5.1:29361522-29361541 | MS.gene074039:intron | 30.0% | |
| TGTTGTAAGTCTGTAGATTT+GGG | - | chr5.1:29362953-29362972 | None:intergenic | 30.0% | |
| TTATGTTGGGCATGAATTTA+TGG | + | chr5.1:29363340-29363359 | MS.gene074039:CDS | 30.0% | |
| TTCAATGCAGTTATGTTGAT+GGG | + | chr5.1:29362238-29362257 | MS.gene074039:intron | 30.0% | |
| TTCATCATTTGCACTTCTAA+AGG | + | chr5.1:29362330-29362349 | MS.gene074039:CDS | 30.0% | |
| TTGAATGTAATCACATGTGT+AGG | + | chr5.1:29359662-29359681 | MS.gene074039:intron | 30.0% | |
| ! | AGACTTGCTTAACTCATTAT+CGG | - | chr5.1:29361387-29361406 | None:intergenic | 30.0% |
| ! | ATTCCTATACTTTGAGTTAC+AGG | + | chr5.1:29361773-29361792 | MS.gene074039:intron | 30.0% |
| ! | CCCTAAAATTTTTAAACCAG+TGG | + | chr5.1:29361054-29361073 | MS.gene074039:intron | 30.0% |
| ! | TAAGGACCAGGATTTTATAT+AGG | + | chr5.1:29360473-29360492 | MS.gene074039:intron | 30.0% |
| ! | TATAACATTTTACCTGAGCA+GGG | - | chr5.1:29360295-29360314 | None:intergenic | 30.0% |
| ! | TTAAGATTTGAGGTAAAAGG+TGG | + | chr5.1:29361269-29361288 | MS.gene074039:intron | 30.0% |
| ! | TTATAACATTTTACCTGAGC+AGG | - | chr5.1:29360296-29360315 | None:intergenic | 30.0% |
| ! | TTCCTATACTTTGAGTTACA+GGG | + | chr5.1:29361774-29361793 | MS.gene074039:intron | 30.0% |
| ! | TTTTACTCCTTTCTTCTTTG+TGG | + | chr5.1:29362692-29362711 | MS.gene074039:intron | 30.0% |
| !! | AGAACGTGGTTTGTTTAATT+TGG | + | chr5.1:29359543-29359562 | MS.gene074039:CDS | 30.0% |
| !! | TATAGTGCTTAAAGTTGATG+TGG | + | chr5.1:29361339-29361358 | MS.gene074039:intron | 30.0% |
| !! | TTAGCTCTAATGACTCAATA+AGG | - | chr5.1:29360404-29360423 | None:intergenic | 30.0% |
| !!! | AAATTTTAGGGTTTTGGTCT+CGG | - | chr5.1:29361045-29361064 | None:intergenic | 30.0% |
| !!! | AACAAAATTGGCTAGTTTTG+TGG | + | chr5.1:29361873-29361892 | MS.gene074039:intron | 30.0% |
| !!! | AGTTTTTTGGGTGTCTTAAA+TGG | + | chr5.1:29362067-29362086 | MS.gene074039:intron | 30.0% |
| !!! | TCTTTTGTGATTTGGTTTTC+AGG | + | chr5.1:29359456-29359475 | MS.gene074039:intron | 30.0% |
| AAGTCCTCAAAAATGATTCC+AGG | + | chr5.1:29361597-29361616 | MS.gene074039:CDS | 35.0% | |
| AATACTATTGGTCCTGCTAT+GGG | + | chr5.1:29360242-29360261 | MS.gene074039:CDS | 35.0% | |
| AATGGTTTCACTATTGGAGT+AGG | + | chr5.1:29361309-29361328 | MS.gene074039:intron | 35.0% | |
| ACCATTCCTTATACAGGAAT+AGG | - | chr5.1:29361199-29361218 | None:intergenic | 35.0% | |
| ACTATTGCTTTGTCTTTCTC+AGG | + | chr5.1:29363292-29363311 | MS.gene074039:intron | 35.0% | |
| ACTTTAATCGTGATTAGTGG+AGG | + | chr5.1:29360824-29360843 | MS.gene074039:intron | 35.0% | |
| ATAGAATCAAGGTCAAATGC+GGG | + | chr5.1:29360522-29360541 | MS.gene074039:intron | 35.0% | |
| ATATGCCAAAATCAAAAGGG+AGG | - | chr5.1:29362599-29362618 | None:intergenic | 35.0% | |
| ATCAATGTTGAAACCAAGCA+AGG | - | chr5.1:29360436-29360455 | None:intergenic | 35.0% | |
| ATCCATAATAGACAGTCCTA+AGG | - | chr5.1:29363016-29363035 | None:intergenic | 35.0% | |
| ATCTACAGACTTACAACATC+AGG | + | chr5.1:29362955-29362974 | MS.gene074039:intron | 35.0% | |
| ATGTTGGGCATGAATTTATG+GGG | + | chr5.1:29363342-29363361 | MS.gene074039:CDS | 35.0% | |
| CAAGATAACATTCACCCAAA+AGG | - | chr5.1:29361932-29361951 | None:intergenic | 35.0% | |
| CATAGAATCAAGGTCAAATG+CGG | + | chr5.1:29360521-29360540 | MS.gene074039:intron | 35.0% | |
| CATGAATCATTGTATTGGGA+AGG | + | chr5.1:29360886-29360905 | MS.gene074039:intron | 35.0% | |
| CATGATTAGTGGGAATAGAA+AGG | + | chr5.1:29360923-29360942 | MS.gene074039:intron | 35.0% | |
| CTAAAAAATTGGTCCTTGCT+TGG | + | chr5.1:29360420-29360439 | MS.gene074039:intron | 35.0% | |
| CTTCAATGCAGTTATGTTGA+TGG | + | chr5.1:29362237-29362256 | MS.gene074039:intron | 35.0% | |
| CTTTCCTTTCTCTCAACATT+CGG | + | chr5.1:29362014-29362033 | MS.gene074039:intron | 35.0% | |
| GAAGAAAGGAGTAAAAAACG+AGG | - | chr5.1:29362688-29362707 | None:intergenic | 35.0% | |
| GAAGTCGTTGAGTCTTTAAA+TGG | + | chr5.1:29361291-29361310 | MS.gene074039:intron | 35.0% | |
| GAATGTTGAGAGAAAGGAAA+GGG | - | chr5.1:29362015-29362034 | None:intergenic | 35.0% | |
| GCAAATTCATACAACAAGTC+AGG | - | chr5.1:29360864-29360883 | None:intergenic | 35.0% | |
| GCAATTAAATCGCAGAAAGT+TGG | + | chr5.1:29360964-29360983 | MS.gene074039:intron | 35.0% | |
| GTGGAGCTATATTTAAACCT+CGG | + | chr5.1:29360632-29360651 | MS.gene074039:intron | 35.0% | |
| TAAAAATGATATGGCATGCG+GGG | - | chr5.1:29361492-29361511 | None:intergenic | 35.0% | |
| TAATACTATTGGTCCTGCTA+TGG | + | chr5.1:29360241-29360260 | MS.gene074039:CDS | 35.0% | |
| TATTTAAACCTCGGTAAGCA+AGG | + | chr5.1:29360641-29360660 | MS.gene074039:intron | 35.0% | |
| TCAACATAACTGCATTGAAG+TGG | - | chr5.1:29362237-29362256 | None:intergenic | 35.0% | |
| TCTCACAATTTACGATCTTG+TGG | - | chr5.1:29360705-29360724 | None:intergenic | 35.0% | |
| TGAGTTAAGCAAGTCTATCA+TGG | + | chr5.1:29361391-29361410 | MS.gene074039:intron | 35.0% | |
| TGGTATCTTCACTATTGAGT+GGG | + | chr5.1:29363580-29363599 | MS.gene074039:CDS | 35.0% | |
| TGTGTAGTGATAAAGATCTG+GGG | + | chr5.1:29360164-29360183 | MS.gene074039:intron | 35.0% | |
| TTAAACCAGTGGAATCTATG+AGG | + | chr5.1:29361065-29361084 | MS.gene074039:intron | 35.0% | |
| TTGCTTAACTCATTATCGGT+GGG | - | chr5.1:29361383-29361402 | None:intergenic | 35.0% | |
| TTTCATGCCACAAAGAAGAA+AGG | - | chr5.1:29362702-29362721 | None:intergenic | 35.0% | |
| TTTCCTTTCTCTCAACATTC+GGG | + | chr5.1:29362015-29362034 | MS.gene074039:intron | 35.0% | |
| ! | ATTTTACTGTATTGCTGCTG+TGG | + | chr5.1:29363462-29363481 | MS.gene074039:CDS | 35.0% |
| ! | GTGTTCTTTTTACTACATGC+AGG | + | chr5.1:29361566-29361585 | MS.gene074039:intron | 35.0% |
| ! | TATTTACCAAGGCATTCTTC+AGG | + | chr5.1:29359355-29359374 | MS.gene074039:CDS | 35.0% |
| ! | TCACGGTCACATTTTTAAAC+CGG | + | chr5.1:29359778-29359797 | MS.gene074039:intron | 35.0% |
| ! | TCCTATACTTTGAGTTACAG+GGG | + | chr5.1:29361775-29361794 | MS.gene074039:intron | 35.0% |
| ! | TCTGTAGTTCTTGTCCTTTT+GGG | + | chr5.1:29361915-29361934 | MS.gene074039:intron | 35.0% |
| ! | TGTGTTACTATGGTATTCTC+TGG | + | chr5.1:29363630-29363649 | MS.gene074039:CDS | 35.0% |
| ! | TTCTGTAGTTCTTGTCCTTT+TGG | + | chr5.1:29361914-29361933 | MS.gene074039:intron | 35.0% |
| !! | ATACAATTGGCAATTTGCTG+AGG | + | chr5.1:29361668-29361687 | MS.gene074039:intron | 35.0% |
| !! | GACTGTGAGGTTTTCTAAAA+GGG | + | chr5.1:29361544-29361563 | MS.gene074039:intron | 35.0% |
| !! | TGTACCTGGAATCATTTTTG+AGG | - | chr5.1:29361604-29361623 | None:intergenic | 35.0% |
| !! | TTAAAGTTGATGTGGCTATG+TGG | + | chr5.1:29361347-29361366 | MS.gene074039:intron | 35.0% |
| !! | TTCTTGAACCTTGCTTTTGA+TGG | + | chr5.1:29362518-29362537 | MS.gene074039:CDS | 35.0% |
| !!! | AATTTTAGGGTTTTGGTCTC+GGG | - | chr5.1:29361044-29361063 | None:intergenic | 35.0% |
| !!! | GATTTCCTCCCTTTTGATTT+TGG | + | chr5.1:29362591-29362610 | MS.gene074039:intron | 35.0% |
| !!! | TGTGGATTTTGAAATGCAAG+TGG | + | chr5.1:29359424-29359443 | MS.gene074039:intron | 35.0% |
| !!! | TTTTCATATTAGCACCGACA+CGG | + | chr5.1:29359586-29359605 | MS.gene074039:intron | 35.0% |
| !!! | TTTTTGGGTGTCTTAAATGG+AGG | + | chr5.1:29362070-29362089 | MS.gene074039:intron | 35.0% |
| AAACATAGCCCATATCCAAG+AGG | - | chr5.1:29362500-29362519 | None:intergenic | 40.0% | |
| AAAGCTTCAATTCCCATAGC+AGG | - | chr5.1:29360257-29360276 | None:intergenic | 40.0% | |
| AACATCAGGCTTACTCAGTA+AGG | + | chr5.1:29362969-29362988 | MS.gene074039:intron | 40.0% | |
| ACAATCCTCATAGATTCCAC+TGG | - | chr5.1:29361073-29361092 | None:intergenic | 40.0% | |
| AGTGCAACACCTAGTTAATC+CGG | - | chr5.1:29359800-29359819 | None:intergenic | 40.0% | |
| ATCACAAATCACAAGGGAGA+CGG | - | chr5.1:29363086-29363105 | None:intergenic | 40.0% | |
| ATCCCCTTTCAACAAAGCAA+TGG | + | chr5.1:29363604-29363623 | MS.gene074039:CDS | 40.0% | |
| CAAATGCTCCTCTTGGATAT+GGG | + | chr5.1:29362489-29362508 | MS.gene074039:CDS | 40.0% | |
| CGAATGTTGAGAGAAAGGAA+AGG | - | chr5.1:29362016-29362035 | None:intergenic | 40.0% | |
| CTAAAGGTCAGGAAATTCTC+AGG | + | chr5.1:29362346-29362365 | MS.gene074039:intron | 40.0% | |
| CTTGCTTAACTCATTATCGG+TGG | - | chr5.1:29361384-29361403 | None:intergenic | 40.0% | |
| GAAGGAACCATTCCTTATAC+AGG | - | chr5.1:29361205-29361224 | None:intergenic | 40.0% | |
| GATGCTTACAAATTTGCGAG+TGG | - | chr5.1:29363559-29363578 | None:intergenic | 40.0% | |
| GCCTATTCCTGTATAAGGAA+TGG | + | chr5.1:29361195-29361214 | MS.gene074039:intron | 40.0% | |
| GTAAGGCCTATTCCTGTATA+AGG | + | chr5.1:29361190-29361209 | MS.gene074039:intron | 40.0% | |
| GTACCCAAAAACAAGTGCTT+GGG | + | chr5.1:29363314-29363333 | MS.gene074039:CDS | 40.0% | |
| GTATATTAGTTACCCTGCTC+AGG | + | chr5.1:29360280-29360299 | MS.gene074039:CDS | 40.0% | |
| GTCCTTAGGACTGTCTATTA+TGG | + | chr5.1:29363011-29363030 | MS.gene074039:intron | 40.0% | |
| GTCTACATCCTAAACAGGAT+CGG | + | chr5.1:29360672-29360691 | MS.gene074039:intron | 40.0% | |
| GTCTTAAATGGAGGAGCTTA+TGG | + | chr5.1:29362079-29362098 | MS.gene074039:intron | 40.0% | |
| GTGGTATCTTCACTATTGAG+TGG | + | chr5.1:29363579-29363598 | MS.gene074039:CDS | 40.0% | |
| TAACGAAATGCATCTCTAGC+AGG | + | chr5.1:29360374-29360393 | MS.gene074039:intron | 40.0% | |
| TAAGATCTTGCAAGGTGAGA+TGG | - | chr5.1:29361122-29361141 | None:intergenic | 40.0% | |
| TACCCAAAAACAAGTGCTTG+GGG | + | chr5.1:29363315-29363334 | MS.gene074039:CDS | 40.0% | |
| TCCCCTGTAACTCAAAGTAT+AGG | - | chr5.1:29361779-29361798 | None:intergenic | 40.0% | |
| TCCCCTTTCAACAAAGCAAT+GGG | + | chr5.1:29363605-29363624 | MS.gene074039:CDS | 40.0% | |
| TCTACATCCTAAACAGGATC+GGG | + | chr5.1:29360673-29360692 | MS.gene074039:intron | 40.0% | |
| TCTTAAAGTCGTGAGATCGT+AGG | + | chr5.1:29361137-29361156 | MS.gene074039:intron | 40.0% | |
| TGACATGTGAGTACAACAAC+AGG | - | chr5.1:29363135-29363154 | None:intergenic | 40.0% | |
| TGCTAAAGTTCTACTTCCGT+TGG | - | chr5.1:29361849-29361868 | None:intergenic | 40.0% | |
| TGGATTTACTAATGCAACCC+AGG | + | chr5.1:29362538-29362557 | MS.gene074039:CDS | 40.0% | |
| TGTTAGCTAAAGAGCCAAAC+CGG | - | chr5.1:29363524-29363543 | None:intergenic | 40.0% | |
| TGTTGATACCGTCACATGTA+AGG | + | chr5.1:29360455-29360474 | MS.gene074039:intron | 40.0% | |
| TTCTTGACTATAAGCCGGTT+TGG | + | chr5.1:29363507-29363526 | MS.gene074039:CDS | 40.0% | |
| ! | AAAATATCCCATGCTGCTTC+TGG | - | chr5.1:29363447-29363466 | None:intergenic | 40.0% |
| ! | AAATTTGCGAGTGGTAGTGA+TGG | - | chr5.1:29363550-29363569 | None:intergenic | 40.0% |
| ! | AAGCACGTGAGCATAAGTTT+TGG | - | chr5.1:29362656-29362675 | None:intergenic | 40.0% |
| ! | AAGTGCTTGGGGTATTATGT+TGG | + | chr5.1:29363326-29363345 | MS.gene074039:CDS | 40.0% |
| ! | ACATATTATCAGCGGTGTCA+AGG | - | chr5.1:29359626-29359645 | None:intergenic | 40.0% |
| ! | ACTTTGAGTTACAGGGGATT+TGG | + | chr5.1:29361781-29361800 | MS.gene074039:intron | 40.0% |
| ! | AGTGCTTGGGGTATTATGTT+GGG | + | chr5.1:29363327-29363346 | MS.gene074039:CDS | 40.0% |
| ! | CATTTGCACTTCTAAAGGTC+AGG | + | chr5.1:29362335-29362354 | MS.gene074039:intron | 40.0% |
| ! | CTTTGAGTTACAGGGGATTT+GGG | + | chr5.1:29361782-29361801 | MS.gene074039:intron | 40.0% |
| ! | GATTAACTAGGTGTTGCACT+TGG | + | chr5.1:29359800-29359819 | MS.gene074039:intron | 40.0% |
| ! | GCATCTTGCGTTTTTGAACT+TGG | + | chr5.1:29359517-29359536 | MS.gene074039:CDS | 40.0% |
| ! | GGACTGTGAGGTTTTCTAAA+AGG | + | chr5.1:29361543-29361562 | MS.gene074039:intron | 40.0% |
| ! | TCGCAAATTTGTAAGCATCG+TGG | + | chr5.1:29363560-29363579 | MS.gene074039:CDS | 40.0% |
| ! | TTTGAGTTACAGGGGATTTG+GGG | + | chr5.1:29361783-29361802 | MS.gene074039:intron | 40.0% |
| ! | TTTTTACTACATGCAGGTGC+TGG | + | chr5.1:29361572-29361591 | MS.gene074039:intron | 40.0% |
| !! | ACCTTGCTTTTAAGGAATCC+TGG | - | chr5.1:29362559-29362578 | None:intergenic | 40.0% |
| !! | AGGAAGGTACAAAGGTATTC+TGG | - | chr5.1:29362295-29362314 | None:intergenic | 40.0% |
| !! | ATACCCCAAGCACTTGTTTT+TGG | - | chr5.1:29363321-29363340 | None:intergenic | 40.0% |
| !! | CACGACTTTAAGATCTTGCA+AGG | - | chr5.1:29361130-29361149 | None:intergenic | 40.0% |
| !! | CCTTGCTTTTAAGGAATCCT+GGG | - | chr5.1:29362558-29362577 | None:intergenic | 40.0% |
| !! | GGAAGGTACAAAGGTATTCT+GGG | - | chr5.1:29362294-29362313 | None:intergenic | 40.0% |
| !! | TACCCCAAGCACTTGTTTTT+GGG | - | chr5.1:29363320-29363339 | None:intergenic | 40.0% |
| !! | TTGATGGGTTCACTCGTATA+CGG | + | chr5.1:29362253-29362272 | MS.gene074039:CDS | 40.0% |
| !! | TTTAGACAAGAGTACCAGAC+AGG | - | chr5.1:29362385-29362404 | None:intergenic | 40.0% |
| AACAACATCCAGAAGCAGCA+TGG | + | chr5.1:29363436-29363455 | MS.gene074039:CDS | 45.0% | |
| AATATACGCCGACCAGATTC+CGG | - | chr5.1:29359339-29359358 | None:intergenic | 45.0% | |
| AATCGTGATTAGTGGAGGAG+TGG | + | chr5.1:29360829-29360848 | MS.gene074039:intron | 45.0% | |
| ACAACATCCAGAAGCAGCAT+GGG | + | chr5.1:29363437-29363456 | MS.gene074039:CDS | 45.0% | |
| AGCATCAAGCACAATGTACC+TGG | - | chr5.1:29361618-29361637 | None:intergenic | 45.0% | |
| ATCACAGTCGCTTGTGGTTT+AGG | + | chr5.1:29360565-29360584 | MS.gene074039:intron | 45.0% | |
| ATCCTGGTCCTTACATGTGA+CGG | - | chr5.1:29360466-29360485 | None:intergenic | 45.0% | |
| ATCGTGATTAGTGGAGGAGT+GGG | + | chr5.1:29360830-29360849 | MS.gene074039:intron | 45.0% | |
| ATGAAACACCTCCAGCAACA+AGG | - | chr5.1:29362315-29362334 | None:intergenic | 45.0% | |
| CATACCAGATCTACCTCAAG+TGG | + | chr5.1:29363658-29363677 | MS.gene074039:CDS | 45.0% | |
| CATTATCGGTGGGACTTAGT+GGG | - | chr5.1:29361373-29361392 | None:intergenic | 45.0% | |
| CCAAATGCTCCTCTTGGATA+TGG | + | chr5.1:29362488-29362507 | MS.gene074039:CDS | 45.0% | |
| CCCAGGATTCCTTAAAAGCA+AGG | + | chr5.1:29362555-29362574 | MS.gene074039:CDS | 45.0% | |
| CCCCTTTCAACAAAGCAATG+GGG | + | chr5.1:29363606-29363625 | MS.gene074039:CDS | 45.0% | |
| CCCTTTCAACAAAGCAATGG+GGG | + | chr5.1:29363607-29363626 | MS.gene074039:CDS | 45.0% | |
| CGTAACATGGATCGTGAGAT+CGG | + | chr5.1:29360726-29360745 | MS.gene074039:intron | 45.0% | |
| CGTGAGATCGTACCAAACTT+GGG | + | chr5.1:29360758-29360777 | MS.gene074039:intron | 45.0% | |
| CTACATCCTAAACAGGATCG+GGG | + | chr5.1:29360674-29360693 | MS.gene074039:intron | 45.0% | |
| CTACCCGAATGTTGAGAGAA+AGG | - | chr5.1:29362021-29362040 | None:intergenic | 45.0% | |
| CTCAAAGACTATCAGCAAGC+TGG | + | chr5.1:29362460-29362479 | MS.gene074039:CDS | 45.0% | |
| CTTGCTGATAGTCTTTGAGC+TGG | - | chr5.1:29362459-29362478 | None:intergenic | 45.0% | |
| CTTTCTCTCAACATTCGGGT+AGG | + | chr5.1:29362019-29362038 | MS.gene074039:intron | 45.0% | |
| CTTTGTACCTTCCTTGTTGC+TGG | + | chr5.1:29362301-29362320 | MS.gene074039:CDS | 45.0% | |
| GGCTGATGAAATTGGTCCTT+AGG | + | chr5.1:29362997-29363016 | MS.gene074039:intron | 45.0% | |
| GGTACCCAAAAACAAGTGCT+TGG | + | chr5.1:29363313-29363332 | MS.gene074039:intron | 45.0% | |
| GTAGTGATAAAGATCTGGGG+TGG | + | chr5.1:29360167-29360186 | MS.gene074039:intron | 45.0% | |
| GTCTTTAGCATAGGACTGTG+AGG | + | chr5.1:29361531-29361550 | MS.gene074039:intron | 45.0% | |
| GTGTTTCCTGAAGAATGCCT+TGG | - | chr5.1:29359364-29359383 | None:intergenic | 45.0% | |
| TAAATGGAGGAGCTTATGGC+TGG | + | chr5.1:29362083-29362102 | MS.gene074039:intron | 45.0% | |
| TACATGTTTGCATGGCCAAG+TGG | + | chr5.1:29363384-29363403 | MS.gene074039:CDS | 45.0% | |
| TCATTATCGGTGGGACTTAG+TGG | - | chr5.1:29361374-29361393 | None:intergenic | 45.0% | |
| TCGGAGTCTACATCCTAAAC+AGG | + | chr5.1:29360667-29360686 | MS.gene074039:intron | 45.0% | |
| TCGTGAGATCGTACCAAACT+TGG | + | chr5.1:29360757-29360776 | MS.gene074039:intron | 45.0% | |
| TCTTGACTACCATGCTGGTA+AGG | + | chr5.1:29361173-29361192 | MS.gene074039:intron | 45.0% | |
| TGGTCGGCGTATATTTACCA+AGG | + | chr5.1:29359344-29359363 | MS.gene074039:CDS | 45.0% | |
| TTCAGGTCAACGAAGCGATT+TGG | + | chr5.1:29359473-29359492 | MS.gene074039:intron | 45.0% | |
| TTGACGTGTCAGTGTCTTGT+TGG | + | chr5.1:29360074-29360093 | MS.gene074039:intron | 45.0% | |
| TTGATTAACCACGTGTCACG+CGG | + | chr5.1:29359899-29359918 | MS.gene074039:intron | 45.0% | |
| TTTCTCACAGTGCGTATCCT+GGG | + | chr5.1:29360601-29360620 | MS.gene074039:intron | 45.0% | |
| ! | ACCCCCATTGCTTTGTTGAA+AGG | - | chr5.1:29363611-29363630 | None:intergenic | 45.0% |
| ! | AGGTTGCTGGCTGATGAAAT+TGG | + | chr5.1:29362989-29363008 | MS.gene074039:intron | 45.0% |
| ! | CAGCAACAAGGAAGGTACAA+AGG | - | chr5.1:29362303-29362322 | None:intergenic | 45.0% |
| ! | CCCCATTGCTTTGTTGAAAG+GGG | - | chr5.1:29363609-29363628 | None:intergenic | 45.0% |
| ! | CCCCCATTGCTTTGTTGAAA+GGG | - | chr5.1:29363610-29363629 | None:intergenic | 45.0% |
| ! | CTTCTAATCAAAGGCGTGTC+AGG | - | chr5.1:29359691-29359710 | None:intergenic | 45.0% |
| ! | TTTTCTCACAGTGCGTATCC+TGG | + | chr5.1:29360600-29360619 | MS.gene074039:intron | 45.0% |
| !! | CCATATCCAAGAGGAGCATT+TGG | - | chr5.1:29362491-29362510 | None:intergenic | 45.0% |
| !! | GGTACAAAGGTATTCTGGGA+TGG | - | chr5.1:29362290-29362309 | None:intergenic | 45.0% |
| AACACCTCCAGCAACAAGGA+AGG | - | chr5.1:29362311-29362330 | None:intergenic | 50.0% | |
| ACCTCGGTAAGCAAGGTAGT+CGG | + | chr5.1:29360648-29360667 | MS.gene074039:intron | 50.0% | |
| AGGAATAGGCCTTACCAGCA+TGG | - | chr5.1:29361185-29361204 | None:intergenic | 50.0% | |
| ATCCTAAACAGGATCGGGGA+AGG | + | chr5.1:29360678-29360697 | MS.gene074039:intron | 50.0% | |
| ATCTTGCAAGGTGAGATGGC+TGG | - | chr5.1:29361118-29361137 | None:intergenic | 50.0% | |
| GATAACAGACCTCACCTGTC+TGG | + | chr5.1:29362368-29362387 | MS.gene074039:intron | 50.0% | |
| GCACATCCAAATGCTCCTCT+TGG | + | chr5.1:29362482-29362501 | MS.gene074039:CDS | 50.0% | |
| GCACTCCAATAAGACCACCA+AGG | - | chr5.1:29360212-29360231 | None:intergenic | 50.0% | |
| GCCTCATATCCACTACCACT+TGG | - | chr5.1:29363402-29363421 | None:intergenic | 50.0% | |
| GGCTTACTCAGTAAGGTTGC+TGG | + | chr5.1:29362976-29362995 | MS.gene074039:intron | 50.0% | |
| GTCTGTCACACAATGTGTGC+AGG | + | chr5.1:29361449-29361468 | MS.gene074039:intron | 50.0% | |
| TACCGTCACATGTAAGGACC+AGG | + | chr5.1:29360461-29360480 | MS.gene074039:intron | 50.0% | |
| TCGTCAATCACAGTCGCTTG+TGG | + | chr5.1:29360559-29360578 | MS.gene074039:intron | 50.0% | |
| TGATTAACCACGTGTCACGC+GGG | + | chr5.1:29359900-29359919 | MS.gene074039:intron | 50.0% | |
| TGGATCGTGAGATCGGAACA+TGG | + | chr5.1:29360733-29360752 | MS.gene074039:intron | 50.0% | |
| TGTACCTTCCTTGTTGCTGG+AGG | + | chr5.1:29362304-29362323 | MS.gene074039:CDS | 50.0% | |
| TTTGAACTTGGCGCAGAACG+TGG | + | chr5.1:29359529-29359548 | MS.gene074039:CDS | 50.0% | |
| TTTGCATGGCCAAGTGGTAG+TGG | + | chr5.1:29363390-29363409 | MS.gene074039:CDS | 50.0% | |
| ! | GAAATACTGGTGGTGCTCCT+TGG | + | chr5.1:29360192-29360211 | MS.gene074039:CDS | 50.0% |
| ! | GCAATGGGGGTGTGTTACTA+TGG | + | chr5.1:29363620-29363639 | MS.gene074039:CDS | 50.0% |
| ! | GTGATAAAGATCTGGGGTGG+TGG | + | chr5.1:29360170-29360189 | MS.gene074039:intron | 50.0% |
| ! | TCTGCAACTTCTGCCACTTG+AGG | - | chr5.1:29363674-29363693 | None:intergenic | 50.0% |
| ! | TCTGCCACTTGAGGTAGATC+TGG | - | chr5.1:29363665-29363684 | None:intergenic | 50.0% |
| !! | ACAAGAGTACCAGACAGGTG+AGG | - | chr5.1:29362380-29362399 | None:intergenic | 50.0% |
| !! | ATCTGGGGTGGTGGAAATAC+TGG | + | chr5.1:29360179-29360198 | MS.gene074039:CDS | 50.0% |
| !! | GCCAAGTGGTAGTGGATATG+AGG | + | chr5.1:29363398-29363417 | MS.gene074039:CDS | 50.0% |
| !! | GTGCTCCTTGGTGGTCTTAT+TGG | + | chr5.1:29360204-29360223 | MS.gene074039:CDS | 50.0% |
| !! | TATTAGCACCGACACGGACA+CGG | + | chr5.1:29359592-29359611 | MS.gene074039:intron | 50.0% |
| !! | TATTGCTGCTGTGGTGCTGT+GGG | + | chr5.1:29363471-29363490 | MS.gene074039:CDS | 50.0% |
| !! | TGAGATCGTAGGTGCTGGAT+CGG | + | chr5.1:29361148-29361167 | MS.gene074039:intron | 50.0% |
| !! | TGGTGGTCTTATTGGAGTGC+TGG | + | chr5.1:29360212-29360231 | MS.gene074039:CDS | 50.0% |
| AGAAGGCGAGGACAAGGATG+CGG | - | chr5.1:29359310-29359329 | None:intergenic | 55.0% | |
| AGATGGCTGGATTCGCAGGT+GGG | - | chr5.1:29361105-29361124 | None:intergenic | 55.0% | |
| AGTCGTGAGATCGTAGGTGC+TGG | + | chr5.1:29361143-29361162 | MS.gene074039:intron | 55.0% | |
| CGGGATCTTGACTACCATGC+TGG | + | chr5.1:29361168-29361187 | MS.gene074039:intron | 55.0% | |
| GACCTTCCCCGATCCTGTTT+AGG | - | chr5.1:29360683-29360702 | None:intergenic | 55.0% | |
| TCCGACTACCTTGCTTACCG+AGG | - | chr5.1:29360652-29360671 | None:intergenic | 55.0% | |
| TGTCAATGCCGTGTCCGTGT+CGG | - | chr5.1:29359603-29359622 | None:intergenic | 55.0% | |
| ! | ATACTGGTGGTGCTCCTTGG+TGG | + | chr5.1:29360195-29360214 | MS.gene074039:CDS | 55.0% |
| ! | GTATTGCTGCTGTGGTGCTG+TGG | + | chr5.1:29363470-29363489 | MS.gene074039:CDS | 55.0% |
| !! | GAGATCGTAGGTGCTGGATC+GGG | + | chr5.1:29361149-29361168 | MS.gene074039:intron | 55.0% |
| !! | TGGGGTGGTGGAAATACTGG+TGG | + | chr5.1:29360182-29360201 | MS.gene074039:CDS | 55.0% |
| !! | TTAGGGTTTTGGTCTCGGGC+CGG | - | chr5.1:29361040-29361059 | None:intergenic | 55.0% |
| CACAGTGCGTATCCTGGGTG+TGG | + | chr5.1:29360606-29360625 | MS.gene074039:intron | 60.0% | |
| CACGCGGGTGTGCAGAATGT+GGG | + | chr5.1:29359915-29359934 | MS.gene074039:intron | 60.0% | |
| CGTATCCTGGGTGTGGAGTG+TGG | + | chr5.1:29360613-29360632 | MS.gene074039:intron | 60.0% | |
| GAGATGGCTGGATTCGCAGG+TGG | - | chr5.1:29361106-29361125 | None:intergenic | 60.0% | |
| GGTGAGATGGCTGGATTCGC+AGG | - | chr5.1:29361109-29361128 | None:intergenic | 60.0% | |
| TAGCTCCACACTCCACACCC+AGG | - | chr5.1:29360621-29360640 | None:intergenic | 60.0% | |
| TCACGCGGGTGTGCAGAATG+TGG | + | chr5.1:29359914-29359933 | MS.gene074039:intron | 60.0% | |
| !! | TAGGGTTTTGGTCTCGGGCC+GGG | - | chr5.1:29361039-29361058 | None:intergenic | 60.0% |
| AGGCGAGGACAAGGATGCGG+CGG | - | chr5.1:29359307-29359326 | None:intergenic | 65.0% | |
| AGTTACCAGGCCGCACGACC+CGG | + | chr5.1:29361018-29361037 | MS.gene074039:intron | 65.0% | |
| CCAGATTCCGGCGACGCAGA+AGG | - | chr5.1:29359327-29359346 | None:intergenic | 65.0% | |
| CCTTCTGCGTCGCCGGAATC+TGG | + | chr5.1:29359324-29359343 | MS.gene074039:CDS | 65.0% | |
| CGACGCAGAAGGCGAGGACA+AGG | - | chr5.1:29359316-29359335 | None:intergenic | 65.0% | |
| CTGCGTCGCCGGAATCTGGT+CGG | + | chr5.1:29359328-29359347 | MS.gene074039:CDS | 65.0% | |
| CTGCACACCCGCGTGACACG+TGG | - | chr5.1:29359910-29359929 | None:intergenic | 70.0% | |
| GTCCTCGCCTTCTGCGTCGC+CGG | + | chr5.1:29359317-29359336 | MS.gene074039:CDS | 70.0% | |
| TTCCGGCGACGCAGAAGGCG+AGG | - | chr5.1:29359322-29359341 | None:intergenic | 70.0% | |
| TGGTCTCGGGCCGGGTCGTG+CGG | - | chr5.1:29361031-29361050 | None:intergenic | 75.0% | |
| ! | TCGGGCCGGGTCGTGCGGCC+TGG | - | chr5.1:29361026-29361045 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 29359281 | 29363722 | 29359281 | ID=MS.gene074039 |
| chr5.1 | mRNA | 29359281 | 29363722 | 29359281 | ID=MS.gene074039.t1;Parent=MS.gene074039 |
| chr5.1 | exon | 29359281 | 29359384 | 29359281 | ID=MS.gene074039.t1.exon1;Parent=MS.gene074039.t1 |
| chr5.1 | CDS | 29359281 | 29359384 | 29359281 | ID=cds.MS.gene074039.t1;Parent=MS.gene074039.t1 |
| chr5.1 | exon | 29359478 | 29359575 | 29359478 | ID=MS.gene074039.t1.exon2;Parent=MS.gene074039.t1 |
| chr5.1 | CDS | 29359478 | 29359575 | 29359478 | ID=cds.MS.gene074039.t1;Parent=MS.gene074039.t1 |
| chr5.1 | exon | 29360171 | 29360301 | 29360171 | ID=MS.gene074039.t1.exon3;Parent=MS.gene074039.t1 |
| chr5.1 | CDS | 29360171 | 29360301 | 29360171 | ID=cds.MS.gene074039.t1;Parent=MS.gene074039.t1 |
| chr5.1 | exon | 29361588 | 29361618 | 29361588 | ID=MS.gene074039.t1.exon4;Parent=MS.gene074039.t1 |
| chr5.1 | CDS | 29361588 | 29361618 | 29361588 | ID=cds.MS.gene074039.t1;Parent=MS.gene074039.t1 |
| chr5.1 | exon | 29362248 | 29362351 | 29362248 | ID=MS.gene074039.t1.exon5;Parent=MS.gene074039.t1 |
| chr5.1 | CDS | 29362248 | 29362351 | 29362248 | ID=cds.MS.gene074039.t1;Parent=MS.gene074039.t1 |
| chr5.1 | exon | 29362455 | 29362576 | 29362455 | ID=MS.gene074039.t1.exon6;Parent=MS.gene074039.t1 |
| chr5.1 | CDS | 29362455 | 29362576 | 29362455 | ID=cds.MS.gene074039.t1;Parent=MS.gene074039.t1 |
| chr5.1 | exon | 29363314 | 29363722 | 29363314 | ID=MS.gene074039.t1.exon7;Parent=MS.gene074039.t1 |
| chr5.1 | CDS | 29363314 | 29363722 | 29363314 | ID=cds.MS.gene074039.t1;Parent=MS.gene074039.t1 |
| Gene Sequence |
| Protein sequence |
