AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07411

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07411.t1 MTR_1g076400 97.730 1013 23 0 1 1013 1 1013 0.0 2016
MS.gene07411.t1 MTR_7g117890 28.755 1012 669 19 18 1005 16 999 3.84e-112 371
MS.gene07411.t1 MTR_8g027140 28.208 1021 683 20 8 1005 11 1004 2.49e-108 360
MS.gene07411.t1 MTR_1g040955 65.455 165 55 2 598 762 12 174 1.08e-57 196
MS.gene07411.t1 MTR_1g040985 66.667 138 45 1 596 733 78 214 1.03e-50 179
MS.gene07411.t1 MTR_3g115670 26.792 795 511 33 258 999 26 802 2.73e-46 179
MS.gene07411.t1 MTR_3g019360 28.031 635 402 18 392 1005 225 825 3.44e-44 173
MS.gene07411.t1 MTR_1g040915 72.917 96 25 1 600 695 167 261 5.04e-35 135
MS.gene07411.t1 MTR_1g040915 71.014 69 20 0 96 164 1 69 3.06e-22 98.6
MS.gene07411.t1 MTR_1g094215 21.997 591 384 15 32 600 31 566 2.04e-13 74.7
MS.gene07411.t1 MTR_4g063800 23.583 547 357 18 91 618 84 588 2.10e-13 74.7
MS.gene07411.t1 MTR_7g116600 38.202 89 55 0 239 327 56 144 1.52e-12 71.6
MS.gene07411.t1 MTR_4g485520 25.360 347 219 10 265 600 109 426 8.32e-12 69.3
MS.gene07411.t1 MTR_4g485520 25.360 347 219 10 265 600 277 594 1.28e-11 68.9
MS.gene07411.t1 MTR_1g094215 26.359 368 224 11 249 600 47 383 2.20e-11 67.8
MS.gene07411.t1 MTR_5g034440 23.729 295 206 6 47 331 65 350 9.14e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07411.t1 AT1G76390 27.595 761 470 29 264 965 28 766 1.03e-37 153
MS.gene07411.t1 AT1G76390 27.595 761 470 29 264 965 28 766 1.03e-37 153
MS.gene07411.t1 AT1G20780 26.826 753 488 29 264 968 26 763 1.29e-36 149
MS.gene07411.t1 AT1G20780 26.826 753 488 29 264 968 26 763 1.29e-36 149
MS.gene07411.t1 AT1G20780 26.826 753 488 29 264 968 26 763 1.29e-36 149
MS.gene07411.t1 AT1G68940 23.258 1062 697 33 35 999 37 1077 1.04e-34 144
MS.gene07411.t1 AT1G68940 23.202 1043 685 32 35 982 37 1058 7.14e-34 141
MS.gene07411.t1 AT1G68940 25.131 764 508 26 261 973 246 996 1.69e-31 134
MS.gene07411.t1 AT3G46510 22.978 544 343 22 85 600 80 575 5.04e-12 70.5
MS.gene07411.t1 AT1G71020 25.067 371 228 12 265 616 99 438 5.97e-12 69.7
MS.gene07411.t1 AT1G71020 25.067 371 228 12 265 616 247 586 8.46e-12 69.7
MS.gene07411.t1 AT3G54790 24.643 280 179 10 70 347 67 316 1.04e-11 69.7
MS.gene07411.t1 AT3G54790 24.643 280 179 10 70 347 67 316 1.04e-11 69.7
MS.gene07411.t1 AT3G54790 24.643 280 179 10 70 347 31 280 1.85e-11 68.9
MS.gene07411.t1 AT3G52450 30.496 141 81 2 265 388 11 151 1.88e-11 68.2
MS.gene07411.t1 AT2G23140 29.213 178 110 3 154 331 142 303 3.30e-11 68.2
MS.gene07411.t1 AT2G23140 29.213 178 110 3 154 331 139 300 3.35e-11 68.2
MS.gene07411.t1 AT2G23140 29.213 178 110 3 154 331 139 300 3.35e-11 68.2

Find 209 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGAACCTCTTGTGTTTC+TGG 0.059826 1.2:+64105461 None:intergenic
GCAGCAGCTGATGTTCTTAT+TGG 0.181583 1.2:-64106292 MS.gene07411:CDS
GGCAAAAGCCATAGTTAATT+TGG 0.187215 1.2:-64104377 MS.gene07411:CDS
GGCAGAAGCTTTAGGACTTT+TGG 0.205522 1.2:-64103117 MS.gene07411:CDS
CCTTAGCAGCTTTCCTTCTA+AGG 0.210627 1.2:+64102994 None:intergenic
AAATGCAATGAGACCTTTAT+TGG 0.217381 1.2:-64103171 MS.gene07411:CDS
TTGACCGGCAGTAATATTTA+TGG 0.222346 1.2:-64103026 MS.gene07411:CDS
CATCTTCACTTCTCTGTCAT+TGG 0.229854 1.2:+64105211 None:intergenic
CTGTTGCAAAACTAGCAATT+TGG 0.235539 1.2:+64104033 None:intergenic
GTTAGTTCTCGTTCGGATTT+TGG 0.239898 1.2:+64103692 None:intergenic
ATCAAAGCTTCTAGCCTTCT+AGG 0.241589 1.2:+64103782 None:intergenic
ACCTCTGCTGAATCGTTTCC+AGG 0.248782 1.2:+64104805 None:intergenic
ATCTGCAATCTCTGGAGTTT+TGG 0.262837 1.2:-64102934 MS.gene07411:CDS
CTCTTGAAGCAGATGTTAAA+AGG 0.268785 1.2:-64106156 MS.gene07411:CDS
CATTGCTTGAACGTTATTCT+AGG 0.272811 1.2:-64102965 MS.gene07411:CDS
AACAAGGATTGGATCTCTAT+TGG 0.289337 1.2:-64105272 MS.gene07411:CDS
TCACTTAAGGCAGAAGCTTT+AGG 0.292250 1.2:-64103125 MS.gene07411:CDS
CCAACGCTACGTGCTCTTCT+TGG 0.306871 1.2:-64103980 MS.gene07411:CDS
TCTTCGATCGATTGTCTTAG+TGG 0.313992 1.2:+64105413 None:intergenic
CCGCATAAACGGAGCTGTTA+TGG 0.327966 1.2:-64105567 MS.gene07411:CDS
ACAAGGATTGGATCTCTATT+GGG 0.328260 1.2:-64105271 MS.gene07411:CDS
AGAAAGTTTCTCGAGGATTT+CGG 0.337226 1.2:+64104126 None:intergenic
TATCGAGTCACAGCGCGATT+TGG 0.345338 1.2:-64103552 MS.gene07411:CDS
AACTACAAAGTTGATTGAAA+TGG 0.346902 1.2:-64103672 MS.gene07411:CDS
ACGCTCTCAGTGCACTCTTC+AGG 0.348203 1.2:-64103592 MS.gene07411:CDS
TGTTAAAAGGGCGAATAATA+TGG 0.357230 1.2:-64106143 MS.gene07411:CDS
AACACTTTCTACATTGGTAT+TGG 0.361873 1.2:-64103234 MS.gene07411:CDS
CAGCTATTAGAGCCTGCATT+TGG 0.370250 1.2:+64105306 None:intergenic
TAACAAATCAATTGCTGCCT+TGG 0.372173 1.2:+64104930 None:intergenic
ACAGTTAATATTGTACCTAT+TGG 0.373426 1.2:+64106346 None:intergenic
GTTTCTGATCTCTTAGTCCT+TGG 0.375417 1.2:+64105888 None:intergenic
AAACCAGCAACCGCTTGGTT+TGG 0.375908 1.2:+64103406 None:intergenic
TCAATACTTTGAAAGGGTTC+AGG 0.379007 1.2:-64105648 MS.gene07411:CDS
AGGTATTCAACTACTCCTTC+TGG 0.379870 1.2:+64103812 None:intergenic
GCCATTGATATTCTTGAATC+CGG 0.380624 1.2:+64104397 None:intergenic
GACCTTTCTTTATCAGCCTT+GGG 0.385289 1.2:-64104265 MS.gene07411:CDS
GGAATTGATTTCTTTGTTGA+TGG 0.386950 1.2:-64104091 MS.gene07411:CDS
ATCCAACACCAAATTAACTA+TGG 0.387861 1.2:+64104369 None:intergenic
GGATCATATTATTTCGTGCT+TGG 0.390606 1.2:-64104971 MS.gene07411:CDS
AACTAGCAATTTGGTGATGA+TGG 0.392035 1.2:+64104042 None:intergenic
GAACTGGCTCAATATCAAAT+AGG 0.394193 1.2:+64106239 None:intergenic
GTTCCTGTGGAAAGGCTAAC+AGG 0.396841 1.2:+64105539 None:intergenic
AGACCTTTCTTTATCAGCCT+TGG 0.397586 1.2:-64104266 MS.gene07411:CDS
TTAGAGCCTGCATTTGGCTC+AGG 0.401778 1.2:+64105312 None:intergenic
CTTTGTAGTTAGTTCTCGTT+CGG 0.401965 1.2:+64103685 None:intergenic
AACATCAAATCTAGAATAAG+AGG 0.405447 1.2:+64104187 None:intergenic
GAAAAGAGTTGGCCAGCATT+AGG 0.407138 1.2:-64105787 MS.gene07411:CDS
AGAAGGCTAGAAGCTTTGAT+TGG 0.408094 1.2:-64103779 MS.gene07411:CDS
CGCTGTGACTCGATATTTGT+AGG 0.409793 1.2:+64103560 None:intergenic
TTTCCAAACCAAGCGGTTGC+TGG 0.410881 1.2:-64103409 MS.gene07411:CDS
AAAATTCTATTAACAAGGAT+TGG 0.412160 1.2:-64105283 MS.gene07411:CDS
TCTTTCCTTTGCCGCATAAA+CGG 0.416779 1.2:-64105578 MS.gene07411:CDS
CTGCTCCAAGAAAACAAATT+CGG 0.420958 1.2:+64105727 None:intergenic
GACTCTAGAGCAACTCTAGC+AGG 0.426038 1.2:+64106178 None:intergenic
AGCTGTAATTCCTTTAGAAC+TGG 0.426952 1.2:+64106223 None:intergenic
CGACAATGATAATGTACAAA+TGG 0.431176 1.2:-64103741 MS.gene07411:CDS
GATACCGTTATCTCGATCCT+TGG 0.434218 1.2:-64105239 MS.gene07411:CDS
TTAAGAATCAATACTTTGAA+AGG 0.434740 1.2:-64105655 MS.gene07411:CDS
ACTACAAAGTTGATTGAAAT+GGG 0.437763 1.2:-64103671 MS.gene07411:CDS
AAGGAAATGGTGGAATACTA+TGG 0.438629 1.2:-64103077 MS.gene07411:CDS
TGATATTGAGCCAGTTCTAA+AGG 0.439774 1.2:-64106233 MS.gene07411:CDS
GGCATTTGCAAGTTCGAGAC+TGG 0.440948 1.2:-64103959 MS.gene07411:CDS
CATGAGCAGTTCTCAAGACT+TGG 0.442224 1.2:+64106314 None:intergenic
ATGGAGACGGACACCTTAGA+AGG 0.442619 1.2:-64103007 MS.gene07411:CDS
GATTTAAACTTGATACAACT+TGG 0.449112 1.2:-64104346 MS.gene07411:CDS
TTGCAAGTTCGAGACTGGTT+TGG 0.450043 1.2:-64103954 MS.gene07411:CDS
CTATCATGAGCTGCACATAA+AGG 0.455630 1.2:+64103365 None:intergenic
TCTTCATCATCTGCAATCTC+TGG 0.456840 1.2:-64102942 MS.gene07411:CDS
AAGGGATATCGGAAGGTCTC+TGG 0.458262 1.2:-64106041 MS.gene07411:CDS
GAGCAAGTTACAAGGGATAT+CGG 0.462903 1.2:-64106052 MS.gene07411:CDS
CAAGTCAAAATCTCCAATAA+AGG 0.465556 1.2:+64103158 None:intergenic
CTAGCCTTCTAGGCTTGAAA+AGG 0.472124 1.2:+64103792 None:intergenic
ATTTCTTTGTTGATGGAGAA+GGG 0.472359 1.2:-64104084 MS.gene07411:CDS
TCAGCCTTGGGTAAACTAGC+TGG 0.474331 1.2:-64104253 MS.gene07411:CDS
TTGGGGTAGTGAGTCACTTA+AGG 0.479262 1.2:-64103138 MS.gene07411:CDS
GGTCCTTCACAAGGGTTACA+AGG 0.481227 1.2:+64104827 None:intergenic
CTCTAGAGCTGATGCAGCAA+GGG 0.481825 1.2:-64105690 MS.gene07411:CDS
TAGATTTGATGTTCTCTCCT+CGG 0.486570 1.2:-64104177 MS.gene07411:CDS
TAAGAATCAATACTTTGAAA+GGG 0.486686 1.2:-64105654 MS.gene07411:CDS
TGCAAGGGCAGTTGGCGTGC+CGG 0.487076 1.2:-64105828 MS.gene07411:CDS
GGATTGGAACTCATACCAAT+AGG 0.487791 1.2:-64106361 MS.gene07411:CDS
CGTTTCCAGGGTCCTTCACA+AGG 0.487815 1.2:+64104818 None:intergenic
TATTGGAAAAGAGAGTTTCA+AGG 0.490061 1.2:-64106275 MS.gene07411:CDS
CCTATCTCGGATGGTTCCAC+CGG 0.490488 1.2:+64105809 None:intergenic
ACGAAGGTTGTGACCTGAGT+TGG 0.490630 1.2:+64104006 None:intergenic
GCTATCGAGAATTTCTGATC+AGG 0.493655 1.2:-64105990 MS.gene07411:CDS
TTGAGAAAATCAACAAGTAA+AGG 0.494414 1.2:+64103512 None:intergenic
GATGCAAAGGGTTGAGTTCG+AGG 0.494531 1.2:-64105948 MS.gene07411:CDS
AGCCATAGTTAATTTGGTGT+TGG 0.494995 1.2:-64104371 MS.gene07411:CDS
GTATGTCATTCGCGAAAGCC+TGG 0.495334 1.2:+64105861 None:intergenic
AAGGGAATTATTGCTTCCTC+CGG 0.497226 1.2:-64104217 MS.gene07411:CDS
CTAGCTGATCGCATGATTCG+AGG 0.500921 1.2:-64104700 MS.gene07411:intron
CCTTAGAAGGAAAGCTGCTA+AGG 0.501027 1.2:-64102994 MS.gene07411:CDS
CTCTGTCATTGGACTTCCCA+AGG 0.507482 1.2:+64105222 None:intergenic
TTGGAAATAACTGTGAGCTT+TGG 0.507616 1.2:+64103425 None:intergenic
GACTACAAGGTGAGATGCAA+AGG 0.508604 1.2:-64105961 MS.gene07411:CDS
GAGGAGATTGCAAGGGCAGT+TGG 0.509609 1.2:-64105836 MS.gene07411:CDS
GATTTCTTTGTTGATGGAGA+AGG 0.512649 1.2:-64104085 MS.gene07411:CDS
ATACCGTTATCTCGATCCTT+GGG 0.513686 1.2:-64105238 MS.gene07411:CDS
AGCTGGATCTCATGCTAACA+AGG 0.519513 1.2:-64104236 MS.gene07411:CDS
TCTACTTGCTAGTTAAATGC+CGG 0.520480 1.2:-64106093 MS.gene07411:CDS
CTTCCCAAGGATCGAGATAA+CGG 0.521135 1.2:+64105235 None:intergenic
TACCCAAGGCTGATAAAGAA+AGG 0.521431 1.2:+64104263 None:intergenic
CCTTTGATAGAAATGATGTC+TGG 0.521661 1.2:-64104304 MS.gene07411:CDS
TAGAGCCTGCATTTGGCTCA+GGG 0.522213 1.2:+64105313 None:intergenic
AATGTACAAATGGCTGCAGC+TGG 0.523529 1.2:-64103731 MS.gene07411:CDS
AGGACTAAGAGATCAGAAAC+AGG 0.524044 1.2:-64105885 MS.gene07411:CDS
CCGGTGGAACCATCCGAGAT+AGG 0.527413 1.2:-64105809 MS.gene07411:CDS
TATCATTGTCGTCGTTCTCG+AGG 0.528609 1.2:+64103753 None:intergenic
CGGCAAAGGAAAGAATTAAG+AGG 0.530404 1.2:+64105587 None:intergenic
AGAGATCAGCTATTGAAGGT+TGG 0.530598 1.2:-64105508 MS.gene07411:CDS
TTGGAAGCAAATGCTTTACC+TGG 0.532479 1.2:-64103311 MS.gene07411:CDS
ACCGGATTCAAGAATATCAA+TGG 0.533121 1.2:-64104398 MS.gene07411:CDS
AAACTTGATACAACTTGGAA+AGG 0.535362 1.2:-64104341 MS.gene07411:CDS
AATACAAACACTTTCTACAT+TGG 0.535747 1.2:-64103240 MS.gene07411:CDS
GCAATTGCAGCAGCTTTCAT+CGG 0.538108 1.2:-64103467 MS.gene07411:CDS
TCACTGCTGCTAATTGTGGC+TGG 0.538398 1.2:-64104732 MS.gene07411:CDS
TGTGAGAGATCAGCTATTGA+AGG 0.539191 1.2:-64105512 MS.gene07411:CDS
GGAATTATTGCTTCCTCCGG+AGG 0.539312 1.2:-64104214 MS.gene07411:CDS
TGATGTTCTCTCCTCGGACA+AGG 0.543610 1.2:-64104171 MS.gene07411:CDS
CCAGACATCATTTCTATCAA+AGG 0.545276 1.2:+64104304 None:intergenic
TTGATACAACTTGGAAAGGA+AGG 0.545563 1.2:-64104337 MS.gene07411:CDS
AGGAAGTTGAGCAAGTTACA+AGG 0.548285 1.2:-64106060 MS.gene07411:CDS
TCTTGAAGCAGATGTTAAAA+GGG 0.550180 1.2:-64106155 MS.gene07411:CDS
AAACTTTCTTCTTCTGACGA+TGG 0.550475 1.2:-64104112 MS.gene07411:CDS
AGAATCCCTGAGCCAAATGC+AGG 0.550783 1.2:-64105318 MS.gene07411:CDS
GATAGAGAGATACGATTCAA+AGG 0.551367 1.2:-64105624 MS.gene07411:CDS
GAGTTGCTTCAAGAAAGATC+TGG 0.552357 1.2:-64104904 MS.gene07411:CDS
AATTGGCTGAATCACAAGGA+TGG 0.555747 1.2:-64104993 MS.gene07411:CDS
GATCCTGTTAGCCTTTCCAC+AGG 0.555922 1.2:-64105542 MS.gene07411:CDS
CAGCTCCGTTTATGCGGCAA+AGG 0.557270 1.2:+64105573 None:intergenic
GATAAAGCTGTTACATGGTG+AGG 0.558362 1.2:-64103285 MS.gene07411:CDS
GTCTCCATAAATATTACTGC+CGG 0.561473 1.2:+64103022 None:intergenic
CACATGTAGTTCCTGTGGAA+AGG 0.563701 1.2:+64105531 None:intergenic
TTCTCTCAGCATGAACCAGA+AGG 0.565766 1.2:-64103827 MS.gene07411:CDS
GTAACCCTTGTGAAGGACCC+TGG 0.565954 1.2:-64104823 MS.gene07411:CDS
AGCTGAAAATTCTATTAACA+AGG 0.570382 1.2:-64105288 MS.gene07411:CDS
ATTGGCTGAATCACAAGGAT+GGG 0.570651 1.2:-64104992 MS.gene07411:CDS
ATTGGAAGAGCATCCGCAGA+GGG 0.571893 1.2:-64103216 MS.gene07411:CDS
AAAGGAAAGAATTAAGAGGT+TGG 0.572084 1.2:+64105591 None:intergenic
ACTTTGAAAGATGTTGTAGA+GGG 0.572945 1.2:-64105176 MS.gene07411:CDS
CCAAGAAGAGCACGTAGCGT+TGG 0.573594 1.2:+64103980 None:intergenic
GAGTCAGAATCATCAAGAAG+TGG 0.574190 1.2:+64103887 None:intergenic
CAAGGATTGGATCTCTATTG+GGG 0.575873 1.2:-64105270 MS.gene07411:CDS
AAAGCAATTCTTGCAGCCAA+TGG 0.577003 1.2:-64103926 MS.gene07411:CDS
TTGCTCAACTTCCTCGACAA+TGG 0.577351 1.2:+64106069 None:intergenic
CCTCTGCTGAATCGTTTCCA+GGG 0.579125 1.2:+64104806 None:intergenic
GCTGAGAGAAAAGAAAGAGC+AGG 0.581887 1.2:+64103840 None:intergenic
TGCTTCAAGAAAGATCTGGT+TGG 0.583477 1.2:-64104900 MS.gene07411:CDS
ATTTAACTAGCAAGTAGAAA+CGG 0.583722 1.2:+64106098 None:intergenic
GGCAGTAATATTTATGGAGA+CGG 0.583777 1.2:-64103020 MS.gene07411:CDS
TAGAATAAGAGGAACACCTC+CGG 0.584174 1.2:+64104198 None:intergenic
CACTTTGAAAGATGTTGTAG+AGG 0.586417 1.2:-64105177 MS.gene07411:CDS
CCATAACAGCTCCGTTTATG+CGG 0.587162 1.2:+64105567 None:intergenic
AAGGGCAGTTGGCGTGCCGG+TGG 0.588235 1.2:-64105825 MS.gene07411:CDS
ATTGTCACTGCTGCTAATTG+TGG 0.588383 1.2:-64104736 MS.gene07411:CDS
TTGCAACAGAATTCCAACTC+AGG 0.589919 1.2:-64104019 MS.gene07411:CDS
TCGCGTTTGATTTGTTTGAC+CGG 0.589935 1.2:-64103041 MS.gene07411:CDS
TAACCTTGTAACCCTTGTGA+AGG 0.590842 1.2:-64104830 MS.gene07411:CDS
ATCCGAGATAGGAAAAGAGT+TGG 0.592571 1.2:-64105798 MS.gene07411:CDS
CGAATCATGCGATCAGCTAG+TGG 0.593637 1.2:+64104703 None:intergenic
AGAGTTGGCCAGCATTAGGA+AGG 0.594767 1.2:-64105783 MS.gene07411:CDS
GAGAAATTGGCTGAATCACA+AGG 0.594803 1.2:-64104997 MS.gene07411:CDS
GCAGGTTTATAGCAGTCTCT+CGG 0.596490 1.2:+64103858 None:intergenic
ACTACAAGGTGAGATGCAAA+GGG 0.597147 1.2:-64105960 MS.gene07411:CDS
GATCAGGTTGATAGACTACA+AGG 0.597370 1.2:-64105974 MS.gene07411:CDS
ACATACTTGAGGAGATTGCA+AGG 0.599820 1.2:-64105844 MS.gene07411:CDS
CACGTAGCGTTGGCTTACGA+AGG 0.602202 1.2:+64103990 None:intergenic
TCTCTAGAGCTGATGCAGCA+AGG 0.604293 1.2:-64105691 MS.gene07411:CDS
TACAGGTTCAATCACTGCAA+AGG 0.608049 1.2:-64103489 MS.gene07411:CDS
TTCCAATAGACAAAATGTTG+TGG 0.608354 1.2:+64103328 None:intergenic
TCTCTCACATGTAGTTCCTG+TGG 0.611431 1.2:+64105526 None:intergenic
TGGAAACGATTCAGCAGAGG+TGG 0.613714 1.2:-64104803 MS.gene07411:CDS
AAGAATTAGAGATACACCAT+TGG 0.614299 1.2:+64103910 None:intergenic
CAACTTCCTCGACAATGGAC+CGG 0.616683 1.2:+64106074 None:intergenic
GGTTTGATAAAGCTGTTACA+TGG 0.619938 1.2:-64103290 MS.gene07411:CDS
AAGCAACTCTAACATTTCCA+AGG 0.624995 1.2:-64104947 MS.gene07411:CDS
TAAGACAATCGATCGAAGAG+TGG 0.630519 1.2:-64105409 MS.gene07411:CDS
AAGAGATCAGAAACAGGACC+AGG 0.632504 1.2:-64105879 MS.gene07411:CDS
AGATCCAGCTAGTTTACCCA+AGG 0.633345 1.2:+64104249 None:intergenic
AAGTTACAAGGGATATCGGA+AGG 0.635464 1.2:-64106048 MS.gene07411:CDS
TTCTTGAAGATACTAGCTTG+AGG 0.637093 1.2:-64105445 MS.gene07411:CDS
GGATTGGATCTCTATTGGGG+AGG 0.641735 1.2:-64105267 MS.gene07411:CDS
TGTAACAGCTTTATCAAACC+AGG 0.642306 1.2:+64103293 None:intergenic
CAGAAGAAGAAAGTTTCTCG+AGG 0.644334 1.2:+64104119 None:intergenic
ATTGTTGACAAGTTGAACCA+AGG 0.644614 1.2:-64105905 MS.gene07411:CDS
GGAAGTTGAGCAAGTTACAA+GGG 0.644907 1.2:-64106059 MS.gene07411:CDS
AACTGATCCAGAAACACAAG+AGG 0.645279 1.2:-64105468 MS.gene07411:CDS
AGAGGGGCATGCAAGAAACA+AGG 0.645650 1.2:-64105159 MS.gene07411:intron
CCCTGGAAACGATTCAGCAG+AGG 0.647958 1.2:-64104806 MS.gene07411:CDS
TTTCGCGAATGACATACTTG+AGG 0.650871 1.2:-64105855 MS.gene07411:CDS
GTTTCCAGGGTCCTTCACAA+GGG 0.658541 1.2:+64104819 None:intergenic
TAAATGCCGGTCCATTGTCG+AGG 0.660709 1.2:-64106080 MS.gene07411:CDS
ACAGTTATTTCCAAACCAAG+CGG 0.662952 1.2:-64103416 MS.gene07411:CDS
CTTTGAAAGATGTTGTAGAG+GGG 0.675379 1.2:-64105175 MS.gene07411:CDS
AATAAGAGGAACACCTCCGG+AGG 0.680566 1.2:+64104201 None:intergenic
GTAATGAATGACCTTGTCCG+AGG 0.681100 1.2:+64104160 None:intergenic
TATGAGTTCCAATCCTACCA+TGG 0.683552 1.2:+64106369 None:intergenic
GCTGGATCTCATGCTAACAA+GGG 0.684666 1.2:-64104235 MS.gene07411:CDS
AATAGGTACAATATTAACTG+TGG 0.686641 1.2:-64106344 MS.gene07411:CDS
ACAAAGTTGATTGAAATGGG+AGG 0.690277 1.2:-64103668 MS.gene07411:CDS
CAGCGCGATTTGGTTAAACG+CGG 0.693546 1.2:-64103542 MS.gene07411:CDS
AACAAACGAGCACCCCTCTG+CGG 0.694775 1.2:+64103203 None:intergenic
CATACTTGAGGAGATTGCAA+GGG 0.701171 1.2:-64105843 MS.gene07411:CDS
CTAGCAAGTAGAAACGGCCA+CGG 0.705648 1.2:+64106104 None:intergenic
GGTGGAATACTATGGAACGA+CGG 0.715990 1.2:-64103069 MS.gene07411:CDS
GTTGAGAAGTACAAGAACCG+TGG 0.724475 1.2:-64106121 MS.gene07411:CDS
TATTGGAAGAGCATCCGCAG+AGG 0.727150 1.2:-64103217 MS.gene07411:CDS
TTGGAAGAGCATCCGCAGAG+GGG 0.744656 1.2:-64103215 MS.gene07411:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGTAATAGGAGAAAT+TGG - chr1.2:64104286-64104305 MS.gene07411:CDS 20.0%
!! AAAATTCTATTAACAAGGAT+TGG - chr1.2:64104013-64104032 MS.gene07411:CDS 20.0%
!! CATTTGCATAAAAATGTAAT+AGG - chr1.2:64104277-64104296 MS.gene07411:CDS 20.0%
!! TTAAGAATCAATACTTTGAA+AGG - chr1.2:64103641-64103660 MS.gene07411:CDS 20.0%
!!! ATCATAAGCATTTTAAAAAC+AGG - chr1.2:64105661-64105680 MS.gene07411:CDS 20.0%
!!! TAAGAATCAATACTTTGAAA+GGG - chr1.2:64103642-64103661 MS.gene07411:CDS 20.0%
!!! TCAATTATTGTCTTTTGATA+AGG - chr1.2:64103917-64103936 MS.gene07411:CDS 20.0%
! AATACAAACACTTTCTACAT+TGG - chr1.2:64106056-64106075 MS.gene07411:CDS 25.0%
! AATAGGTACAATATTAACTG+TGG - chr1.2:64102952-64102971 MS.gene07411:CDS 25.0%
! ACAGTTAATATTGTACCTAT+TGG + chr1.2:64102953-64102972 None:intergenic 25.0%
! AGCTGAAAATTCTATTAACA+AGG - chr1.2:64104008-64104027 MS.gene07411:CDS 25.0%
! ATTTAACTAGCAAGTAGAAA+CGG + chr1.2:64103201-64103220 None:intergenic 25.0%
! GATTTAAACTTGATACAACT+TGG - chr1.2:64104950-64104969 MS.gene07411:CDS 25.0%
! TTGAGAAAATCAACAAGTAA+AGG + chr1.2:64105787-64105806 None:intergenic 25.0%
!! AACATCAAATCTAGAATAAG+AGG + chr1.2:64105112-64105131 None:intergenic 25.0%
!! AACTACAAAGTTGATTGAAA+TGG - chr1.2:64105624-64105643 MS.gene07411:CDS 25.0%
!! AATTTAACGACAAATTTTCC+CGG + chr1.2:64103948-64103967 None:intergenic 25.0%
!! ACTACAAAGTTGATTGAAAT+GGG - chr1.2:64105625-64105644 MS.gene07411:CDS 25.0%
!!! CATTTTAAAAACAGGCAAAA+TGG - chr1.2:64105669-64105688 MS.gene07411:CDS 25.0%
!!! TTTATTGGAGATTTTGACTT+GGG - chr1.2:64106140-64106159 MS.gene07411:CDS 25.0%
AAACTTGATACAACTTGGAA+AGG - chr1.2:64104955-64104974 MS.gene07411:CDS 30.0%
AAAGGAAAGAATTAAGAGGT+TGG + chr1.2:64103708-64103727 None:intergenic 30.0%
AAATGCAATGAGACCTTTAT+TGG - chr1.2:64106125-64106144 MS.gene07411:CDS 30.0%
AACACTTTCTACATTGGTAT+TGG - chr1.2:64106062-64106081 MS.gene07411:CDS 30.0%
AAGAATTAGAGATACACCAT+TGG + chr1.2:64105389-64105408 None:intergenic 30.0%
ATATAATCTACTATGACCCT+AGG + chr1.2:64104847-64104866 None:intergenic 30.0%
ATCCAACACCAAATTAACTA+TGG + chr1.2:64104930-64104949 None:intergenic 30.0%
CAAGTCAAAATCTCCAATAA+AGG + chr1.2:64106141-64106160 None:intergenic 30.0%
TATTGGAAAAGAGAGTTTCA+AGG - chr1.2:64103021-64103040 MS.gene07411:CDS 30.0%
TCATGAATACTAAATCTCAG+TGG + chr1.2:64104191-64104210 None:intergenic 30.0%
TCTTGAAGCAGATGTTAAAA+GGG - chr1.2:64103141-64103160 MS.gene07411:CDS 30.0%
TGTTAAAAGGGCGAATAATA+TGG - chr1.2:64103153-64103172 MS.gene07411:CDS 30.0%
TTCCAATAGACAAAATGTTG+TGG + chr1.2:64105971-64105990 None:intergenic 30.0%
! ACTTTGAAAGATGTTGTAGA+GGG - chr1.2:64104120-64104139 MS.gene07411:CDS 30.0%
! ATTTCTTTGTTGATGGAGAA+GGG - chr1.2:64105212-64105231 MS.gene07411:CDS 30.0%
! CGACAATGATAATGTACAAA+TGG - chr1.2:64105555-64105574 MS.gene07411:CDS 30.0%
! GGAATTGATTTCTTTGTTGA+TGG - chr1.2:64105205-64105224 MS.gene07411:CDS 30.0%
!! AAAAGCCGAATTTGTTTTCT+TGG - chr1.2:64103564-64103583 MS.gene07411:CDS 30.0%
!! AGTTGTTTTCATAAGCTATC+CGG + chr1.2:64104744-64104763 None:intergenic 30.0%
!! CTTATTTCTATAAGCTCATC+CGG - chr1.2:64104722-64104741 MS.gene07411:CDS 30.0%
!!! ATTGAAGGTTGGTTTTATGA+TGG - chr1.2:64103799-64103818 MS.gene07411:CDS 30.0%
!!! CTTGTTGATTTTCTCAATAC+AGG - chr1.2:64105790-64105809 MS.gene07411:CDS 30.0%
!!! CTTTATTGGAGATTTTGACT+TGG - chr1.2:64106139-64106158 MS.gene07411:CDS 30.0%
!!! TTATTGGAGATTTTGACTTG+GGG - chr1.2:64106141-64106160 MS.gene07411:CDS 30.0%
AAAAAGAAGAAGCTGCGAAT+AGG - chr1.2:64103536-64103555 MS.gene07411:CDS 35.0%
AAACTTTCTTCTTCTGACGA+TGG - chr1.2:64105184-64105203 MS.gene07411:CDS 35.0%
AACAAGGATTGGATCTCTAT+TGG - chr1.2:64104024-64104043 MS.gene07411:CDS 35.0%
AAGCAACTCTAACATTTCCA+AGG - chr1.2:64104349-64104368 MS.gene07411:CDS 35.0%
ACAAGGATTGGATCTCTATT+GGG - chr1.2:64104025-64104044 MS.gene07411:CDS 35.0%
ACCGGATTCAAGAATATCAA+TGG - chr1.2:64104898-64104917 MS.gene07411:CDS 35.0%
AGAAAGTTTCTCGAGGATTT+CGG + chr1.2:64105173-64105192 None:intergenic 35.0%
CACTTATATGTCAAGTCCTA+GGG - chr1.2:64104828-64104847 MS.gene07411:CDS 35.0%
CATTGCTTGAACGTTATTCT+AGG - chr1.2:64106331-64106350 MS.gene07411:CDS 35.0%
CCAGACATCATTTCTATCAA+AGG + chr1.2:64104995-64105014 None:intergenic 35.0%
CCTTTGATAGAAATGATGTC+TGG - chr1.2:64104992-64105011 MS.gene07411:CDS 35.0%
CTCTTGAAGCAGATGTTAAA+AGG - chr1.2:64103140-64103159 MS.gene07411:CDS 35.0%
CTGCTCCAAGAAAACAAATT+CGG + chr1.2:64103572-64103591 None:intergenic 35.0%
CTGTTGCAAAACTAGCAATT+TGG + chr1.2:64105266-64105285 None:intergenic 35.0%
GATAGAGAGATACGATTCAA+AGG - chr1.2:64103672-64103691 MS.gene07411:CDS 35.0%
GCCATTGATATTCTTGAATC+CGG + chr1.2:64104902-64104921 None:intergenic 35.0%
GGATCATATTATTTCGTGCT+TGG - chr1.2:64104325-64104344 MS.gene07411:CDS 35.0%
GGCAAAAGCCATAGTTAATT+TGG - chr1.2:64104919-64104938 MS.gene07411:CDS 35.0%
GGCAGTAATATTTATGGAGA+CGG - chr1.2:64106276-64106295 MS.gene07411:CDS 35.0%
GGTTTGATAAAGCTGTTACA+TGG - chr1.2:64106006-64106025 MS.gene07411:CDS 35.0%
GTCTCCATAAATATTACTGC+CGG + chr1.2:64106277-64106296 None:intergenic 35.0%
TAACAAATCAATTGCTGCCT+TGG + chr1.2:64104369-64104388 None:intergenic 35.0%
TAGATTTGATGTTCTCTCCT+CGG - chr1.2:64105119-64105138 MS.gene07411:intron 35.0%
TCACTTATATGTCAAGTCCT+AGG - chr1.2:64104827-64104846 MS.gene07411:CDS 35.0%
TTGACCGGCAGTAATATTTA+TGG - chr1.2:64106270-64106289 MS.gene07411:CDS 35.0%
TTGATACAACTTGGAAAGGA+AGG - chr1.2:64104959-64104978 MS.gene07411:CDS 35.0%
TTGGAAATAACTGTGAGCTT+TGG + chr1.2:64105874-64105893 None:intergenic 35.0%
! AAGGAAATGGTGGAATACTA+TGG - chr1.2:64106219-64106238 MS.gene07411:CDS 35.0%
! ACAAAGTTGATTGAAATGGG+AGG - chr1.2:64105628-64105647 MS.gene07411:CDS 35.0%
! ACAGTTATTTCCAAACCAAG+CGG - chr1.2:64105880-64105899 MS.gene07411:CDS 35.0%
! ATTGTTGACAAGTTGAACCA+AGG - chr1.2:64103391-64103410 MS.gene07411:CDS 35.0%
! CACTTTGAAAGATGTTGTAG+AGG - chr1.2:64104119-64104138 MS.gene07411:CDS 35.0%
! CTTTGAAAGATGTTGTAGAG+GGG - chr1.2:64104121-64104140 MS.gene07411:CDS 35.0%
! CTTTGTAGTTAGTTCTCGTT+CGG + chr1.2:64105614-64105633 None:intergenic 35.0%
! GAACTGGCTCAATATCAAAT+AGG + chr1.2:64103060-64103079 None:intergenic 35.0%
! GACCACAACATTTTGTCTAT+TGG - chr1.2:64105966-64105985 MS.gene07411:CDS 35.0%
! GATTTCTTTGTTGATGGAGA+AGG - chr1.2:64105211-64105230 MS.gene07411:CDS 35.0%
! GGTTTTTGTGTCAAAGGAAA+TGG - chr1.2:64106206-64106225 MS.gene07411:CDS 35.0%
! GTCTTTTGATAAGGTCTATC+CGG - chr1.2:64103926-64103945 MS.gene07411:CDS 35.0%
! TCAATACTTTGAAAGGGTTC+AGG - chr1.2:64103648-64103667 MS.gene07411:CDS 35.0%
! TCTACTTGCTAGTTAAATGC+CGG - chr1.2:64103203-64103222 MS.gene07411:CDS 35.0%
! TCTTTTGATAAGGTCTATCC+GGG - chr1.2:64103927-64103946 MS.gene07411:CDS 35.0%
! TGATATTGAGCCAGTTCTAA+AGG - chr1.2:64103063-64103082 MS.gene07411:CDS 35.0%
! TGTAACAGCTTTATCAAACC+AGG + chr1.2:64106006-64106025 None:intergenic 35.0%
! TTCTTGAAGATACTAGCTTG+AGG - chr1.2:64103851-64103870 MS.gene07411:CDS 35.0%
! TTCTTTTTCCTTCCTAATGC+TGG + chr1.2:64103524-64103543 None:intergenic 35.0%
! TTTTGTGTCAAAGGAAATGG+TGG - chr1.2:64106209-64106228 MS.gene07411:CDS 35.0%
!! AACTAGCAATTTGGTGATGA+TGG + chr1.2:64105257-64105276 None:intergenic 35.0%
!! AATACCTTTTCAAGCCTAGA+AGG - chr1.2:64105500-64105519 MS.gene07411:CDS 35.0%
!! AGCCATAGTTAATTTGGTGT+TGG - chr1.2:64104925-64104944 MS.gene07411:CDS 35.0%
!! AGCTGTAATTCCTTTAGAAC+TGG + chr1.2:64103076-64103095 None:intergenic 35.0%
AAAGCAATTCTTGCAGCCAA+TGG - chr1.2:64105370-64105389 MS.gene07411:CDS 40.0%
AACTGATCCAGAAACACAAG+AGG - chr1.2:64103828-64103847 MS.gene07411:CDS 40.0%
AAGGGAATTATTGCTTCCTC+CGG - chr1.2:64105079-64105098 MS.gene07411:intron 40.0%
AAGTTACAAGGGATATCGGA+AGG - chr1.2:64103248-64103267 MS.gene07411:CDS 40.0%
AATTGGCTGAATCACAAGGA+TGG - chr1.2:64104303-64104322 MS.gene07411:CDS 40.0%
ACATACTTGAGGAGATTGCA+AGG - chr1.2:64103452-64103471 MS.gene07411:CDS 40.0%
ACTACAAGGTGAGATGCAAA+GGG - chr1.2:64103336-64103355 MS.gene07411:CDS 40.0%
AGACCTTTCTTTATCAGCCT+TGG - chr1.2:64105030-64105049 MS.gene07411:intron 40.0%
AGAGATCAGCTATTGAAGGT+TGG - chr1.2:64103788-64103807 MS.gene07411:CDS 40.0%
AGGAAGTTGAGCAAGTTACA+AGG - chr1.2:64103236-64103255 MS.gene07411:CDS 40.0%
AGGACTAAGAGATCAGAAAC+AGG - chr1.2:64103411-64103430 MS.gene07411:CDS 40.0%
AGGTATTCAACTACTCCTTC+TGG + chr1.2:64105487-64105506 None:intergenic 40.0%
ATACCGTTATCTCGATCCTT+GGG - chr1.2:64104058-64104077 MS.gene07411:CDS 40.0%
ATATGTCAAACCTGCAATCG+CGG - chr1.2:64104235-64104254 MS.gene07411:CDS 40.0%
ATCCGAGATAGGAAAAGAGT+TGG - chr1.2:64103498-64103517 MS.gene07411:CDS 40.0%
ATTGGCTGAATCACAAGGAT+GGG - chr1.2:64104304-64104323 MS.gene07411:CDS 40.0%
ATTGTCACTGCTGCTAATTG+TGG - chr1.2:64104560-64104579 MS.gene07411:intron 40.0%
CAAGGATTGGATCTCTATTG+GGG - chr1.2:64104026-64104045 MS.gene07411:CDS 40.0%
CAGAAGAAGAAAGTTTCTCG+AGG + chr1.2:64105180-64105199 None:intergenic 40.0%
CATACTTGAGGAGATTGCAA+GGG - chr1.2:64103453-64103472 MS.gene07411:CDS 40.0%
CATCTTCACTTCTCTGTCAT+TGG + chr1.2:64104088-64104107 None:intergenic 40.0%
CGGCAAAGGAAAGAATTAAG+AGG + chr1.2:64103712-64103731 None:intergenic 40.0%
CTATCATGAGCTGCACATAA+AGG + chr1.2:64105934-64105953 None:intergenic 40.0%
GACCTTTCTTTATCAGCCTT+GGG - chr1.2:64105031-64105050 MS.gene07411:intron 40.0%
GAGAAATTGGCTGAATCACA+AGG - chr1.2:64104299-64104318 MS.gene07411:CDS 40.0%
GAGCAAGTTACAAGGGATAT+CGG - chr1.2:64103244-64103263 MS.gene07411:CDS 40.0%
GAGTCAGAATCATCAAGAAG+TGG + chr1.2:64105412-64105431 None:intergenic 40.0%
GAGTTGCTTCAAGAAAGATC+TGG - chr1.2:64104392-64104411 MS.gene07411:CDS 40.0%
GATAAAGCTGTTACATGGTG+AGG - chr1.2:64106011-64106030 MS.gene07411:CDS 40.0%
GCTATCGAGAATTTCTGATC+AGG - chr1.2:64103306-64103325 MS.gene07411:CDS 40.0%
GGAAGTTGAGCAAGTTACAA+GGG - chr1.2:64103237-64103256 MS.gene07411:CDS 40.0%
GGATTGGAACTCATACCAAT+AGG - chr1.2:64102935-64102954 MS.gene07411:CDS 40.0%
GTTTCTGATCTCTTAGTCCT+TGG + chr1.2:64103411-64103430 None:intergenic 40.0%
TAACCTTGTAACCCTTGTGA+AGG - chr1.2:64104466-64104485 MS.gene07411:intron 40.0%
TAAGACAATCGATCGAAGAG+TGG - chr1.2:64103887-64103906 MS.gene07411:CDS 40.0%
TACAGGTTCAATCACTGCAA+AGG - chr1.2:64105807-64105826 MS.gene07411:CDS 40.0%
TACCCAAGGCTGATAAAGAA+AGG + chr1.2:64105036-64105055 None:intergenic 40.0%
TAGAATAAGAGGAACACCTC+CGG + chr1.2:64105101-64105120 None:intergenic 40.0%
TCAAGAACCTCTTGTGTTTC+TGG + chr1.2:64103838-64103857 None:intergenic 40.0%
TCACTTAAGGCAGAAGCTTT+AGG - chr1.2:64106171-64106190 MS.gene07411:CDS 40.0%
TCTTCATCATCTGCAATCTC+TGG - chr1.2:64106354-64106373 MS.gene07411:CDS 40.0%
TCTTCGATCGATTGTCTTAG+TGG + chr1.2:64103886-64103905 None:intergenic 40.0%
TCTTTCCTTTGCCGCATAAA+CGG - chr1.2:64103718-64103737 MS.gene07411:CDS 40.0%
TGCTTCAAGAAAGATCTGGT+TGG - chr1.2:64104396-64104415 MS.gene07411:CDS 40.0%
TGTGAGAGATCAGCTATTGA+AGG - chr1.2:64103784-64103803 MS.gene07411:CDS 40.0%
TTGCAACAGAATTCCAACTC+AGG - chr1.2:64105277-64105296 MS.gene07411:CDS 40.0%
TTGGAAGCAAATGCTTTACC+TGG - chr1.2:64105985-64106004 MS.gene07411:CDS 40.0%
TTTCGCGAATGACATACTTG+AGG - chr1.2:64103441-64103460 MS.gene07411:CDS 40.0%
! AACTCTTTTCCTATCTCGGA+TGG + chr1.2:64103499-64103518 None:intergenic 40.0%
! AGAAGGCTAGAAGCTTTGAT+TGG - chr1.2:64105517-64105536 MS.gene07411:CDS 40.0%
! ATCAAAGCTTCTAGCCTTCT+AGG + chr1.2:64105517-64105536 None:intergenic 40.0%
! GGAGAAGGTTTTTGTGTCAA+AGG - chr1.2:64106200-64106219 MS.gene07411:CDS 40.0%
! GGTGGCGAAGAAAATTTTGA+TGG - chr1.2:64104511-64104530 MS.gene07411:intron 40.0%
!! GATCAGGTTGATAGACTACA+AGG - chr1.2:64103322-64103341 MS.gene07411:CDS 40.0%
!! GTTAGTTCTCGTTCGGATTT+TGG + chr1.2:64105607-64105626 None:intergenic 40.0%
!! TCGCGTTTGATTTGTTTGAC+CGG - chr1.2:64106255-64106274 MS.gene07411:CDS 40.0%
!!! AGCTTTAGGACTTTTGGAGA+AGG - chr1.2:64106185-64106204 MS.gene07411:CDS 40.0%
!!! ATCTGCAATCTCTGGAGTTT+TGG - chr1.2:64106362-64106381 MS.gene07411:CDS 40.0%
AAGAGATCAGAAACAGGACC+AGG - chr1.2:64103417-64103436 MS.gene07411:CDS 45.0%
AATGTACAAATGGCTGCAGC+TGG - chr1.2:64105565-64105584 MS.gene07411:CDS 45.0%
AGCTGGATCTCATGCTAACA+AGG - chr1.2:64105060-64105079 MS.gene07411:intron 45.0%
ATCCTGCTTCTTCTCTTCTC+AGG - chr1.2:64104875-64104894 MS.gene07411:CDS 45.0%
CACATGTAGTTCCTGTGGAA+AGG + chr1.2:64103768-64103787 None:intergenic 45.0%
CAGCTATTAGAGCCTGCATT+TGG + chr1.2:64103993-64104012 None:intergenic 45.0%
CATGAGCAGTTCTCAAGACT+TGG + chr1.2:64102985-64103004 None:intergenic 45.0%
CCATAACAGCTCCGTTTATG+CGG + chr1.2:64103732-64103751 None:intergenic 45.0%
CCTTAGAAGGAAAGCTGCTA+AGG - chr1.2:64106302-64106321 MS.gene07411:CDS 45.0%
CCTTAGCAGCTTTCCTTCTA+AGG + chr1.2:64106305-64106324 None:intergenic 45.0%
CGCTGTGACTCGATATTTGT+AGG + chr1.2:64105739-64105758 None:intergenic 45.0%
CTTCCCAAGGATCGAGATAA+CGG + chr1.2:64104064-64104083 None:intergenic 45.0%
GAAAAGAGTTGGCCAGCATT+AGG - chr1.2:64103509-64103528 MS.gene07411:CDS 45.0%
GACTACAAGGTGAGATGCAA+AGG - chr1.2:64103335-64103354 MS.gene07411:CDS 45.0%
GATACCGTTATCTCGATCCT+TGG - chr1.2:64104057-64104076 MS.gene07411:CDS 45.0%
GCAATTGCAGCAGCTTTCAT+CGG - chr1.2:64105829-64105848 MS.gene07411:CDS 45.0%
GCAGCAGCTGATGTTCTTAT+TGG - chr1.2:64103004-64103023 MS.gene07411:CDS 45.0%
GCAGGTTTATAGCAGTCTCT+CGG + chr1.2:64105441-64105460 None:intergenic 45.0%
GCTGAGAGAAAAGAAAGAGC+AGG + chr1.2:64105459-64105478 None:intergenic 45.0%
GCTGGATCTCATGCTAACAA+GGG - chr1.2:64105061-64105080 MS.gene07411:intron 45.0%
GGTGGAATACTATGGAACGA+CGG - chr1.2:64106227-64106246 MS.gene07411:CDS 45.0%
GTAATGAATGACCTTGTCCG+AGG + chr1.2:64105139-64105158 None:intergenic 45.0%
TATCATTGTCGTCGTTCTCG+AGG + chr1.2:64105546-64105565 None:intergenic 45.0%
TATGTCAAACCTGCAATCGC+GGG - chr1.2:64104236-64104255 MS.gene07411:CDS 45.0%
TCGCATGATTCGAGGTAAGA+AGG - chr1.2:64104604-64104623 MS.gene07411:intron 45.0%
TCTCTCACATGTAGTTCCTG+TGG + chr1.2:64103773-64103792 None:intergenic 45.0%
TTCTCTCAGCATGAACCAGA+AGG - chr1.2:64105469-64105488 MS.gene07411:CDS 45.0%
TTGAAAAACCAGCAACCGCT+TGG + chr1.2:64105898-64105917 None:intergenic 45.0%
TTGCTCAACTTCCTCGACAA+TGG + chr1.2:64103230-64103249 None:intergenic 45.0%
TTGGGGTAGTGAGTCACTTA+AGG - chr1.2:64106158-64106177 MS.gene07411:CDS 45.0%
! AGATCCAGCTAGTTTACCCA+AGG + chr1.2:64105050-64105069 None:intergenic 45.0%
! CTAGCCTTCTAGGCTTGAAA+AGG + chr1.2:64105507-64105526 None:intergenic 45.0%
! GGCCAACTCTTTTCCTATCT+CGG + chr1.2:64103503-64103522 None:intergenic 45.0%
! GTTGAGAAGTACAAGAACCG+TGG - chr1.2:64103175-64103194 MS.gene07411:CDS 45.0%
! TTGCAAGTTCGAGACTGGTT+TGG - chr1.2:64105342-64105361 MS.gene07411:CDS 45.0%
!! GTTCTCGTTCGGATTTTGGT+AGG + chr1.2:64105603-64105622 None:intergenic 45.0%
!!! GGCAGAAGCTTTAGGACTTT+TGG - chr1.2:64106179-64106198 MS.gene07411:CDS 45.0%
AAACCAGCAACCGCTTGGTT+TGG + chr1.2:64105893-64105912 None:intergenic 50.0%
AAATTAGTCCCCGCGATTGC+AGG + chr1.2:64104248-64104267 None:intergenic 50.0%
AAGGGATATCGGAAGGTCTC+TGG - chr1.2:64103255-64103274 MS.gene07411:CDS 50.0%
AATAAGAGGAACACCTCCGG+AGG + chr1.2:64105098-64105117 None:intergenic 50.0%
ACCTCTGCTGAATCGTTTCC+AGG + chr1.2:64104494-64104513 None:intergenic 50.0%
ACGAAGGTTGTGACCTGAGT+TGG + chr1.2:64105293-64105312 None:intergenic 50.0%
AGAATCCCTGAGCCAAATGC+AGG - chr1.2:64103978-64103997 MS.gene07411:CDS 50.0%
AGAGTTGGCCAGCATTAGGA+AGG - chr1.2:64103513-64103532 MS.gene07411:CDS 50.0%
ATGGAGACGGACACCTTAGA+AGG - chr1.2:64106289-64106308 MS.gene07411:CDS 50.0%
ATGTCAAACCTGCAATCGCG+GGG - chr1.2:64104237-64104256 MS.gene07411:CDS 50.0%
CAACTTCCTCGACAATGGAC+CGG + chr1.2:64103225-64103244 None:intergenic 50.0%
CCGCATAAACGGAGCTGTTA+TGG - chr1.2:64103729-64103748 MS.gene07411:CDS 50.0%
CCTCTGCTGAATCGTTTCCA+GGG + chr1.2:64104493-64104512 None:intergenic 50.0%
CGAATCATGCGATCAGCTAG+TGG + chr1.2:64104596-64104615 None:intergenic 50.0%
CTAGCAAGTAGAAACGGCCA+CGG + chr1.2:64103195-64103214 None:intergenic 50.0%
CTAGCTGATCGCATGATTCG+AGG - chr1.2:64104596-64104615 MS.gene07411:intron 50.0%
CTCTGTCATTGGACTTCCCA+AGG + chr1.2:64104077-64104096 None:intergenic 50.0%
GATGCAAAGGGTTGAGTTCG+AGG - chr1.2:64103348-64103367 MS.gene07411:CDS 50.0%
GCTTCTTCTCTTCTCAGGAC+CGG - chr1.2:64104880-64104899 MS.gene07411:CDS 50.0%
GGAATTATTGCTTCCTCCGG+AGG - chr1.2:64105082-64105101 MS.gene07411:intron 50.0%
GGATTGGATCTCTATTGGGG+AGG - chr1.2:64104029-64104048 MS.gene07411:CDS 50.0%
GGCATTTGCAAGTTCGAGAC+TGG - chr1.2:64105337-64105356 MS.gene07411:CDS 50.0%
GGTCCTTCACAAGGGTTACA+AGG + chr1.2:64104472-64104491 None:intergenic 50.0%
GTATGTCATTCGCGAAAGCC+TGG + chr1.2:64103438-64103457 None:intergenic 50.0%
GTCCTGAGAAGAGAAGAAGC+AGG + chr1.2:64104880-64104899 None:intergenic 50.0%
GTTCCTGTGGAAAGGCTAAC+AGG + chr1.2:64103760-64103779 None:intergenic 50.0%
GTTTCCAGGGTCCTTCACAA+GGG + chr1.2:64104480-64104499 None:intergenic 50.0%
TAAATGCCGGTCCATTGTCG+AGG - chr1.2:64103216-64103235 MS.gene07411:CDS 50.0%
TATCGAGTCACAGCGCGATT+TGG - chr1.2:64105744-64105763 MS.gene07411:CDS 50.0%
TCACTGCTGCTAATTGTGGC+TGG - chr1.2:64104564-64104583 MS.gene07411:intron 50.0%
TCAGCCTTGGGTAAACTAGC+TGG - chr1.2:64105043-64105062 MS.gene07411:intron 50.0%
TGATGTTCTCTCCTCGGACA+AGG - chr1.2:64105125-64105144 MS.gene07411:intron 50.0%
TGGAAACGATTCAGCAGAGG+TGG - chr1.2:64104493-64104512 MS.gene07411:intron 50.0%
TTTCCAAACCAAGCGGTTGC+TGG - chr1.2:64105887-64105906 MS.gene07411:CDS 50.0%
! AGAGGGGCATGCAAGAAACA+AGG - chr1.2:64104137-64104156 MS.gene07411:CDS 50.0%
! TAGAGCCTGCATTTGGCTCA+GGG + chr1.2:64103986-64104005 None:intergenic 50.0%
! TTAGAGCCTGCATTTGGCTC+AGG + chr1.2:64103987-64104006 None:intergenic 50.0%
!! ATTGGAAGAGCATCCGCAGA+GGG - chr1.2:64106080-64106099 MS.gene07411:CDS 50.0%
!! CAGCGCGATTTGGTTAAACG+CGG - chr1.2:64105754-64105773 MS.gene07411:CDS 50.0%
!! CTCTAGAGCTGATGCAGCAA+GGG - chr1.2:64103606-64103625 MS.gene07411:CDS 50.0%
!! GACTCTAGAGCAACTCTAGC+AGG + chr1.2:64103121-64103140 None:intergenic 50.0%
!! GATCCTGTTAGCCTTTCCAC+AGG - chr1.2:64103754-64103773 MS.gene07411:CDS 50.0%
!! TATTGGAAGAGCATCCGCAG+AGG - chr1.2:64106079-64106098 MS.gene07411:CDS 50.0%
!! TCTCTAGAGCTGATGCAGCA+AGG - chr1.2:64103605-64103624 MS.gene07411:CDS 50.0%
AACAAACGAGCACCCCTCTG+CGG + chr1.2:64106096-64106115 None:intergenic 55.0%
ACGCTCTCAGTGCACTCTTC+AGG - chr1.2:64105704-64105723 MS.gene07411:CDS 55.0%
CAGCTCCGTTTATGCGGCAA+AGG + chr1.2:64103726-64103745 None:intergenic 55.0%
CCAACGCTACGTGCTCTTCT+TGG - chr1.2:64105316-64105335 MS.gene07411:CDS 55.0%
CCCTGGAAACGATTCAGCAG+AGG - chr1.2:64104490-64104509 MS.gene07411:intron 55.0%
CCTATCTCGGATGGTTCCAC+CGG + chr1.2:64103490-64103509 None:intergenic 55.0%
CGTTTCCAGGGTCCTTCACA+AGG + chr1.2:64104481-64104500 None:intergenic 55.0%
GAGGAGATTGCAAGGGCAGT+TGG - chr1.2:64103460-64103479 MS.gene07411:CDS 55.0%
GTAACCCTTGTGAAGGACCC+TGG - chr1.2:64104473-64104492 MS.gene07411:intron 55.0%
! CCAAGAAGAGCACGTAGCGT+TGG + chr1.2:64105319-64105338 None:intergenic 55.0%
!! CACGTAGCGTTGGCTTACGA+AGG + chr1.2:64105309-64105328 None:intergenic 55.0%
!! TTGGAAGAGCATCCGCAGAG+GGG - chr1.2:64106081-64106100 MS.gene07411:CDS 55.0%
CCGGTGGAACCATCCGAGAT+AGG - chr1.2:64103487-64103506 MS.gene07411:CDS 60.0%
TGCAAGGGCAGTTGGCGTGC+CGG - chr1.2:64103468-64103487 MS.gene07411:CDS 65.0%
AAGGGCAGTTGGCGTGCCGG+TGG - chr1.2:64103471-64103490 MS.gene07411:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 64102929 64106389 64102929 ID=MS.gene07411
chr1.2 mRNA 64102929 64106389 64102929 ID=MS.gene07411.t1;Parent=MS.gene07411
chr1.2 exon 64105160 64106389 64105160 ID=MS.gene07411.t1.exon1;Parent=MS.gene07411.t1
chr1.2 CDS 64105160 64106389 64105160 ID=cds.MS.gene07411.t1;Parent=MS.gene07411.t1
chr1.2 exon 64104701 64105019 64104701 ID=MS.gene07411.t1.exon2;Parent=MS.gene07411.t1
chr1.2 CDS 64104701 64105019 64104701 ID=cds.MS.gene07411.t1;Parent=MS.gene07411.t1
chr1.2 exon 64102929 64104421 64102929 ID=MS.gene07411.t1.exon3;Parent=MS.gene07411.t1
chr1.2 CDS 64102929 64104421 64102929 ID=cds.MS.gene07411.t1;Parent=MS.gene07411.t1
Gene Sequence

>MS.gene07411

ATGGTAGGATTGGAACTCATACCAATAGGTACAATATTAACTGTGGTAACAAGCCAAGTCTTGAGAACTGCTCATGCAGCAGCTGATGTTCTTATTGGAAAAGAGAGTTTCAAGGCACTTTCGAAATACCTATTTGATATTGAGCCAGTTCTAAAGGAATTACAGCTTCAAGAATTGAATGATTCTCAACCTGCTAGAGTTGCTCTAGAGTCTCTTGAAGCAGATGTTAAAAGGGCGAATAATATGGTTGAGAAGTACAAGAACCGTGGCCGTTTCTACTTGCTAGTTAAATGCCGGTCCATTGTCGAGGAAGTTGAGCAAGTTACAAGGGATATCGGAAGGTCTCTGGCTGCACTGTCTATTGCAAATACTGAAGTGCTATCGAGAATTTCTGATCAGGTTGATAGACTACAAGGTGAGATGCAAAGGGTTGAGTTCGAGGCTTCACAGTCTCAGCTTGAAATTGTTGACAAGTTGAACCAAGGACTAAGAGATCAGAAACAGGACCAGGCTTTCGCGAATGACATACTTGAGGAGATTGCAAGGGCAGTTGGCGTGCCGGTGGAACCATCCGAGATAGGAAAAGAGTTGGCCAGCATTAGGAAGGAAAAAGAAGAAGCTGCGAATAGGAAAGAAAAAGCCGAATTTGTTTTCTTGGAGCAGATCATTAAGTTACTCTCTAGAGCTGATGCAGCAAGGGATTATGAAGAAGTTAAGAATCAATACTTTGAAAGGGTTCAGGTGATAGAGAGATACGATTCAAAGGAAAAATATATCCAACCTCTTAATTCTTTCCTTTGCCGCATAAACGGAGCTGTTATGGTTGATCCTGTTAGCCTTTCCACAGGAACTACATGTGAGAGATCAGCTATTGAAGGTTGGTTTTATGATGGAAACAGAACTGATCCAGAAACACAAGAGGTTCTTGAAGATACTAGCTTGAGGTCAAACATTCCACTAAGACAATCGATCGAAGAGTGGAGAGAACTCAATTATTGTCTTTTGATAAGGTCTATCCGGGAAAATTTGTCGTTAAATTCTGATCTGAAAGAATCCCTGAGCCAAATGCAGGCTCTAATAGCTGAAAATTCTATTAACAAGGATTGGATCTCTATTGGGGAGGTTACTGATACCGTTATCTCGATCCTTGGGAAGTCCAATGACAGAGAAGTGAAGATGAAGATTTTGATCACTTTGAAAGATGTTGTAGAGGGGCATGCAAGAAACAAGGTAAACATGCTTTTTTTCTTTCTTTCTTGCCACTGAGATTTAGTATTCATGATAACTTACTATACTATTATTACGTATATGTCAAACCTGCAATCGCGGGGACTAATTTAAATTCGAACATTTGCATAAAAATGTAATAGGAGAAATTGGCTGAATCACAAGGATGGGATCATATTATTTCGTGCTTGGAAAGCAACTCTAACATTTCCAAGGCAGCAATTGATTTGTTATATGAGTTGCTTCAAGAAAGATCTGGTTGGAATCAATGTTTTTGCAAAAAACTTTCTGAGAACGACACTGCAGTTCTTAACCTTGTAACCCTTGTGAAGGACCCTGGAAACGATTCAGCAGAGGTGGCGAAGAAAATTTTGATGGAGCTTTTTGAAATAAATGAAAGCAGCATTGTCACTGCTGCTAATTGTGGCTGGTATAAGCCACTAGCTGATCGCATGATTCGAGGTAAGAAGGTTGAATGTTTTCTTGTTGTTACATGTTTATTGTGATGAGATGAATGCTTTTCATTACGTTGAAGATATTATGACATGTCTACAAGCTGTTTTCAGCTTATTTCTATAAGCTCATCCGGATAGCTTATGAAAACAACTTATTATTTGAACACAGTTTGACTTCTTTTTTTTCTTTTTTTTATAGATATAGCATATACATAATCACTTATATGTCAAGTCCTAGGGTCATAGTAGATTATATAGTTAACTATCCTGCTTCTTCTCTTCTCAGGACCGGATTCAAGAATATCAATGGCAAAAGCCATAGTTAATTTGGTGTTGGATGATTTAAACTTGATACAACTTGGAAAGGAAGGAGTTATAACTCCTTTGATAGAAATGATGTCTGGCAGTATCGAGTCGAAAGACCTTTCTTTATCAGCCTTGGGTAAACTAGCTGGATCTCATGCTAACAAGGGAATTATTGCTTCCTCCGGAGGTGTTCCTCTTATTCTAGATTTGATGTTCTCTCCTCGGACAAGGTCATTCATTACAATTAAATGCTCCGAAATCCTCGAGAAACTTTCTTCTTCTGACGATGGAATTGATTTCTTTGTTGATGGAGAAGGGAAACAACTTGAGTTAGATTCCATCATCACCAAATTGCTAGTTTTGCAACAGAATTCCAACTCAGGTCACAACCTTCGTAAGCCAACGCTACGTGCTCTTCTTGGCATTTGCAAGTTCGAGACTGGTTTGGTGAAGAAAGCAATTCTTGCAGCCAATGGTGTATCTCTAATTCTTCCACTTCTTGATGATTCTGACTCAGAAGTCCGAGAGACTGCTATAAACCTGCTCTTTCTTTTCTCTCAGCATGAACCAGAAGGAGTAGTTGAATACCTTTTCAAGCCTAGAAGGCTAGAAGCTTTGATTGGATTCCTCGAGAACGACGACAATGATAATGTACAAATGGCTGCAGCTGGCTTACTAGCTAACCTACCAAAATCCGAACGAGAACTAACTACAAAGTTGATTGAAATGGGAGGACTTGATGCAATCATAAGCATTTTAAAAACAGGCAAAATGGAAGCAAAAGAAAACGCTCTCAGTGCACTCTTCAGGTTCACAGATCCTACAAATATCGAGTCACAGCGCGATTTGGTTAAACGCGGAATATATCCTTTACTTGTTGATTTTCTCAATACAGGTTCAATCACTGCAAAGGCAATTGCAGCAGCTTTCATCGGCGATCTTTCTATGAGCACACCAAAGCTCACAGTTATTTCCAAACCAAGCGGTTGCTGGTTTTTCAAATCATCGCGCGTTCCTTTATGTGCAGCTCATGATAGCGTATGCAGTGTGACCACAACATTTTGTCTATTGGAAGCAAATGCTTTACCTGGTTTGATAAAGCTGTTACATGGTGAGGTTCATGCAACTGCTTATGAAGCAATACAAACACTTTCTACATTGGTATTGGAAGAGCATCCGCAGAGGGGTGCTCGTTTGTTGCATGAGAAAAATGCAATGAGACCTTTATTGGAGATTTTGACTTGGGGTAGTGAGTCACTTAAGGCAGAAGCTTTAGGACTTTTGGAGAAGGTTTTTGTGTCAAAGGAAATGGTGGAATACTATGGAACGACGGCTAGATCGCGTTTGATTTGTTTGACCGGCAGTAATATTTATGGAGACGGACACCTTAGAAGGAAAGCTGCTAAGGTATTGTCATTGCTTGAACGTTATTCTAGGTCTTCATCATCTGCAATCTCTGGAGTTTTGGAGTGA
Protein sequence

>MS.gene07411.t1

MVGLELIPIGTILTVVTSQVLRTAHAAADVLIGKESFKALSKYLFDIEPVLKELQLQELNDSQPARVALESLEADVKRANNMVEKYKNRGRFYLLVKCRSIVEEVEQVTRDIGRSLAALSIANTEVLSRISDQVDRLQGEMQRVEFEASQSQLEIVDKLNQGLRDQKQDQAFANDILEEIARAVGVPVEPSEIGKELASIRKEKEEAANRKEKAEFVFLEQIIKLLSRADAARDYEEVKNQYFERVQVIERYDSKEKYIQPLNSFLCRINGAVMVDPVSLSTGTTCERSAIEGWFYDGNRTDPETQEVLEDTSLRSNIPLRQSIEEWRELNYCLLIRSIRENLSLNSDLKESLSQMQALIAENSINKDWISIGEVTDTVISILGKSNDREVKMKILITLKDVVEGHARNKEKLAESQGWDHIISCLESNSNISKAAIDLLYELLQERSGWNQCFCKKLSENDTAVLNLVTLVKDPGNDSAEVAKKILMELFEINESSIVTAANCGWYKPLADRMIRGPDSRISMAKAIVNLVLDDLNLIQLGKEGVITPLIEMMSGSIESKDLSLSALGKLAGSHANKGIIASSGGVPLILDLMFSPRTRSFITIKCSEILEKLSSSDDGIDFFVDGEGKQLELDSIITKLLVLQQNSNSGHNLRKPTLRALLGICKFETGLVKKAILAANGVSLILPLLDDSDSEVRETAINLLFLFSQHEPEGVVEYLFKPRRLEALIGFLENDDNDNVQMAAAGLLANLPKSERELTTKLIEMGGLDAIISILKTGKMEAKENALSALFRFTDPTNIESQRDLVKRGIYPLLVDFLNTGSITAKAIAAAFIGDLSMSTPKLTVISKPSGCWFFKSSRVPLCAAHDSVCSVTTTFCLLEANALPGLIKLLHGEVHATAYEAIQTLSTLVLEEHPQRGARLLHEKNAMRPLLEILTWGSESLKAEALGLLEKVFVSKEMVEYYGTTARSRLICLTGSNIYGDGHLRRKAAKVLSLLERYSRSSSSAISGVLE