Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074351.t1 | RHN75950.1 | 98.5 | 839 | 13 | 0 | 1 | 839 | 1 | 839 | 0.00E+00 | 1625.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074351.t1 | Q9SE43 | 75.8 | 848 | 188 | 7 | 1 | 839 | 3 | 842 | 0.0e+00 | 1265.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074351.t1 | A0A396JCR0 | 98.5 | 839 | 13 | 0 | 1 | 839 | 1 | 839 | 0.0e+00 | 1625.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene074351.t1 | TF | HB-HD-ZIP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058938 | MS.gene074351 | 0.912318 | 2.23E-83 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074351.t1 | MTR_2g094520 | 98.331 | 839 | 14 | 0 | 1 | 839 | 1 | 839 | 0.0 | 1721 |
MS.gene074351.t1 | MTR_4g058970 | 79.693 | 847 | 161 | 7 | 1 | 839 | 3 | 846 | 0.0 | 1392 |
MS.gene074351.t1 | MTR_2g030130 | 64.286 | 840 | 280 | 9 | 13 | 839 | 4 | 836 | 0.0 | 1105 |
MS.gene074351.t1 | MTR_2g101190 | 62.275 | 835 | 289 | 10 | 21 | 839 | 12 | 836 | 0.0 | 1058 |
MS.gene074351.t1 | MTR_3g109800 | 61.837 | 849 | 297 | 12 | 3 | 839 | 2 | 835 | 0.0 | 1051 |
MS.gene074351.t1 | MTR_8g013980 | 60.072 | 839 | 306 | 11 | 16 | 839 | 8 | 832 | 0.0 | 1042 |
MS.gene074351.t1 | MTR_3g109800 | 62.047 | 801 | 277 | 12 | 3 | 791 | 2 | 787 | 0.0 | 984 |
MS.gene074351.t1 | MTR_3g109800 | 61.646 | 717 | 250 | 11 | 3 | 707 | 2 | 705 | 0.0 | 869 |
MS.gene074351.t1 | MTR_3g109800 | 59.235 | 601 | 225 | 8 | 249 | 839 | 4 | 594 | 0.0 | 721 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074351.t1 | AT5G60690 | 75.708 | 848 | 189 | 7 | 1 | 839 | 3 | 842 | 0.0 | 1330 |
MS.gene074351.t1 | AT2G34710 | 62.818 | 866 | 278 | 12 | 3 | 839 | 2 | 852 | 0.0 | 1084 |
MS.gene074351.t1 | AT1G30490 | 62.874 | 835 | 282 | 10 | 21 | 839 | 19 | 841 | 0.0 | 1062 |
MS.gene074351.t1 | AT1G52150 | 61.916 | 835 | 289 | 14 | 21 | 839 | 15 | 836 | 0.0 | 1042 |
MS.gene074351.t1 | AT1G52150 | 61.796 | 835 | 291 | 14 | 21 | 839 | 15 | 837 | 0.0 | 1040 |
MS.gene074351.t1 | AT4G32880 | 60.143 | 838 | 306 | 13 | 17 | 839 | 9 | 833 | 0.0 | 1017 |
MS.gene074351.t1 | AT1G52150 | 62.008 | 787 | 270 | 14 | 21 | 791 | 15 | 788 | 0.0 | 972 |
MS.gene074351.t1 | AT5G32670 | 64.286 | 70 | 25 | 0 | 289 | 358 | 37 | 106 | 2.61e-25 | 104 |
MS.gene074351.t1 | AT5G52170 | 25.203 | 369 | 218 | 11 | 24 | 355 | 61 | 408 | 3.82e-15 | 80.1 |
MS.gene074351.t1 | AT5G52170 | 25.203 | 369 | 218 | 11 | 24 | 355 | 61 | 408 | 4.47e-15 | 80.1 |
MS.gene074351.t1 | AT5G52170 | 25.203 | 369 | 218 | 11 | 24 | 355 | 61 | 408 | 4.47e-15 | 80.1 |
MS.gene074351.t1 | AT4G04890 | 41.176 | 85 | 43 | 2 | 23 | 104 | 65 | 145 | 3.47e-11 | 67.4 |
MS.gene074351.t1 | AT4G04890 | 41.176 | 85 | 43 | 2 | 23 | 104 | 65 | 145 | 3.47e-11 | 67.4 |
Find 229 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAGATCTGATTCTCTTAT+TGG | 0.129142 | 2.2:-6856965 | MS.gene074351:CDS |
TGGCTTTCTCGTTCATTAAT+TGG | 0.181977 | 2.2:-6856381 | MS.gene074351:CDS |
TGGCTGCTGCTCGCGACTTC+TGG | 0.215757 | 2.2:-6859205 | MS.gene074351:CDS |
GTCTGAAAGCAGTCATTATC+TGG | 0.240359 | 2.2:-6856999 | MS.gene074351:intron |
TAGGGATGTTCATCTCTTAC+AGG | 0.241280 | 2.2:-6857758 | MS.gene074351:intron |
TCTAAGATACACTACAAATT+TGG | 0.241855 | 2.2:-6859180 | MS.gene074351:CDS |
GGCACCAAGGGAGCATCTTC+TGG | 0.244403 | 2.2:+6857564 | None:intergenic |
GCAAATATCCCAACCGAATC+TGG | 0.265732 | 2.2:+6859613 | None:intergenic |
TGAGCTAGTGTAAGTGCTTC+TGG | 0.266525 | 2.2:+6857122 | None:intergenic |
GATGCTCCCTTGGTGCCTTC+TGG | 0.276911 | 2.2:-6857558 | MS.gene074351:CDS |
TAGAGCGGCCGCAGCACTTC+TGG | 0.282965 | 2.2:+6858792 | None:intergenic |
GATTCGGGAGTGCCCGGTTT+TGG | 0.283665 | 2.2:-6860522 | MS.gene074351:CDS |
TGCAGGCACTTCGCTATATC+AGG | 0.289145 | 2.2:-6858642 | MS.gene074351:intron |
GCAAGTTCCCTTTCACTCCT+TGG | 0.320702 | 2.2:-6858301 | MS.gene074351:CDS |
CCGTCAGCATTTGGAGCTGC+TGG | 0.331315 | 2.2:+6860023 | None:intergenic |
GGCTCAATGTTGGCCAAAAC+CGG | 0.331817 | 2.2:+6860509 | None:intergenic |
GTCGATTGGGTCCAGATGCC+TGG | 0.336793 | 2.2:-6859783 | MS.gene074351:CDS |
TGAGAAGGCAACAGCTGATT+CGG | 0.337430 | 2.2:-6860538 | MS.gene074351:CDS |
TGCTGAACAGATTGAAGCTT+TGG | 0.342547 | 2.2:-6860597 | MS.gene074351:CDS |
GAACTCAGACCTGCAGGTTT+AGG | 0.343156 | 2.2:+6858908 | None:intergenic |
GAAAGGTCACTGTCTGGTTC+TGG | 0.344827 | 2.2:-6859045 | MS.gene074351:CDS |
CGTTAGCATGAGCTGTTGCC+TGG | 0.351416 | 2.2:+6857345 | None:intergenic |
CCATCCAGCGTTAACACTTC+TGG | 0.355722 | 2.2:-6857170 | MS.gene074351:CDS |
CTACCTTCATCCCAGGCATC+TGG | 0.361257 | 2.2:+6859772 | None:intergenic |
TCAAGGTTTGGTTTCAGAAT+AGG | 0.367043 | 2.2:-6860478 | MS.gene074351:CDS |
GGGTTTGCTTGTATGCCAGC+TGG | 0.372830 | 2.2:-6856493 | MS.gene074351:CDS |
CTAGAAATTATCCGCCTTGA+AGG | 0.374957 | 2.2:-6857808 | MS.gene074351:CDS |
CGAACCTTGGATTTGACATC+TGG | 0.378202 | 2.2:-6857380 | MS.gene074351:CDS |
GACCGCTCTCAAAAGGAAAC+TGG | 0.380637 | 2.2:+6857276 | None:intergenic |
TCACTGTCTGGTTCTGGTGC+TGG | 0.384059 | 2.2:-6859039 | MS.gene074351:CDS |
CGAGCAGCAGCCAGCGTCAT+TGG | 0.385288 | 2.2:+6859215 | None:intergenic |
TGTGAGGCAGCTGCAGCATT+AGG | 0.386159 | 2.2:+6859015 | None:intergenic |
CTTCTCAATGAACTAGGCTT+AGG | 0.391335 | 2.2:+6860554 | None:intergenic |
TGCGATGAATAAGCTGTTGA+TGG | 0.394036 | 2.2:-6860286 | MS.gene074351:CDS |
TCACTCAAAGCTGGCTCCTA+TGG | 0.398623 | 2.2:-6858046 | MS.gene074351:CDS |
GGCTTACAGTGTGTAATTGC+TGG | 0.398924 | 2.2:+6860202 | None:intergenic |
ACAATGTTCCCAGCTGGAAA+TGG | 0.408347 | 2.2:-6859352 | MS.gene074351:CDS |
ATGTCTCCTCCGCAATTGAT+AGG | 0.410911 | 2.2:+6859841 | None:intergenic |
CGCTGTGCAGGCGGTTGCAA+CGG | 0.418938 | 2.2:-6857201 | MS.gene074351:CDS |
GCTGGCTCCTATGGCTATCC+TGG | 0.420819 | 2.2:-6858037 | MS.gene074351:CDS |
TCACAGCTGGTGAATGAGAA+TGG | 0.421055 | 2.2:-6860234 | MS.gene074351:CDS |
TCCGTTGCCACCTTGAGAAA+TGG | 0.423146 | 2.2:+6859591 | None:intergenic |
ACGCCACTACCGTCAGCATT+TGG | 0.423791 | 2.2:+6860014 | None:intergenic |
AATGGATCTGCCAGAGCTAT+AGG | 0.426936 | 2.2:-6857100 | MS.gene074351:intron |
CGTCAGCATTTGGAGCTGCT+GGG | 0.428553 | 2.2:+6860024 | None:intergenic |
CTCAGCTTCAGAGTGTGAAC+AGG | 0.430488 | 2.2:-6860317 | MS.gene074351:CDS |
GCATCTCTCAATGAATTCAT+AGG | 0.433129 | 2.2:+6859972 | None:intergenic |
CACAGCTGGTGAATGAGAAT+GGG | 0.435607 | 2.2:-6860233 | MS.gene074351:CDS |
GAGAAGGCAACAGCTGATTC+GGG | 0.436593 | 2.2:-6860537 | MS.gene074351:CDS |
TCTGGGAACATGTCATCAAT+TGG | 0.437275 | 2.2:+6857582 | None:intergenic |
TACAGGAACTGCTGTCGATT+GGG | 0.439880 | 2.2:-6859796 | MS.gene074351:CDS |
GTAAGTGCTTCTGGAGTGCC+AGG | 0.441398 | 2.2:+6857131 | None:intergenic |
GTCAACGCACATCGATTGTT+AGG | 0.445713 | 2.2:+6857308 | None:intergenic |
AGCCTAAGCAGATCAAGGTT+TGG | 0.446562 | 2.2:-6860490 | MS.gene074351:CDS |
CTAAAAGTTCTAAGAACTGC+AGG | 0.446795 | 2.2:+6858568 | None:intergenic |
TCATTTGAACAGTTATGTAC+TGG | 0.447517 | 2.2:-6857651 | MS.gene074351:intron |
GGGATCTGCATGTCAACAAT+GGG | 0.449516 | 2.2:-6856472 | MS.gene074351:CDS |
AGACAACAGTGTTCATTGCT+TGG | 0.451078 | 2.2:-6856401 | MS.gene074351:CDS |
TTGTTAGCCTGGTCCAGATT+CGG | 0.451273 | 2.2:-6859626 | MS.gene074351:intron |
GAGCAGCATAAAATAGCATC+TGG | 0.451862 | 2.2:+6856911 | None:intergenic |
AGGCATGATTGCTTGATTGC+CGG | 0.454592 | 2.2:+6857994 | None:intergenic |
AGCTTTGGAAAAGGTTTATG+TGG | 0.455518 | 2.2:-6860582 | MS.gene074351:CDS |
AAATGAGAGGCTGCAGAAGC+AGG | 0.455804 | 2.2:-6860259 | MS.gene074351:CDS |
GCACCAAGGGAGCATCTTCT+GGG | 0.456872 | 2.2:+6857565 | None:intergenic |
GGTTTCAATGACGCTGTCAA+TGG | 0.456971 | 2.2:-6858424 | MS.gene074351:CDS |
TCCTGCAGACCGCTCTCAAA+AGG | 0.460653 | 2.2:+6857269 | None:intergenic |
TTTGAGTGATGCAGCAGAAA+AGG | 0.462084 | 2.2:+6858060 | None:intergenic |
ACAGATTGAAGCTTTGGAAA+AGG | 0.463288 | 2.2:-6860591 | MS.gene074351:CDS |
CCATGGCACGTCAGTATGTC+CGG | 0.463423 | 2.2:-6857235 | MS.gene074351:CDS |
TACACTACAAATTTGGAAAA+CGG | 0.463495 | 2.2:-6859173 | MS.gene074351:CDS |
TGTTAGTTTAGAACCTACTA+AGG | 0.469404 | 2.2:-6859545 | MS.gene074351:intron |
GCGTGTAGTTTCCGCTGTGC+AGG | 0.471991 | 2.2:-6857213 | MS.gene074351:CDS |
AACCTCGTAGACCTCATTCC+AGG | 0.475028 | 2.2:+6858019 | None:intergenic |
TTCATCTTTGCTAACCAGGC+TGG | 0.476545 | 2.2:-6856762 | MS.gene074351:CDS |
GGGATATTTGCCATTTCTCA+AGG | 0.476954 | 2.2:-6859601 | MS.gene074351:CDS |
CTGGTTAGCAAAGATGAATA+CGG | 0.477103 | 2.2:+6856767 | None:intergenic |
AGCTGCCTCACAGTTTGCGA+GGG | 0.478943 | 2.2:-6859004 | MS.gene074351:CDS |
ACAGCTGATTCGGGAGTGCC+CGG | 0.479031 | 2.2:-6860528 | MS.gene074351:CDS |
AGCCTGGTCCAGATTCGGTT+GGG | 0.479081 | 2.2:-6859621 | MS.gene074351:CDS |
GGTCCAGATGCCTGGGATGA+AGG | 0.479652 | 2.2:-6859775 | MS.gene074351:intron |
GAGGGAGCATCGCTCGGAGT+GGG | 0.480911 | 2.2:-6858101 | MS.gene074351:CDS |
GCTCTATGAATCGTCGCAAA+TGG | 0.481115 | 2.2:-6858775 | MS.gene074351:CDS |
CATCTTGAGCAAGACCTTCA+AGG | 0.481464 | 2.2:+6857794 | None:intergenic |
CATATTTGCCAGACGAATCA+AGG | 0.481482 | 2.2:+6860630 | None:intergenic |
AGGAGTGAAAGGGAACTTGC+TGG | 0.482905 | 2.2:+6858304 | None:intergenic |
CAACTGGTTGAGAATTCAAC+AGG | 0.483215 | 2.2:+6857523 | None:intergenic |
GTTTGTGAAAGGTCACTGTC+TGG | 0.483493 | 2.2:-6859051 | MS.gene074351:CDS |
CGTATTCATCTTTGCTAACC+AGG | 0.483530 | 2.2:-6856766 | MS.gene074351:CDS |
CAGCTGCCTCACAGTTTGCG+AGG | 0.484030 | 2.2:-6859005 | MS.gene074351:CDS |
TCTGCTGCATCACTCAAAGC+TGG | 0.485761 | 2.2:-6858055 | MS.gene074351:CDS |
TTCTCAATGAACTAGGCTTA+GGG | 0.486895 | 2.2:+6860555 | None:intergenic |
TGTTGCCTTCTCAATGAACT+AGG | 0.487411 | 2.2:+6860548 | None:intergenic |
ATTGTTCCTCCATTTCCAGC+TGG | 0.487699 | 2.2:+6859343 | None:intergenic |
CAATTCCTCCAAGGAGTGAA+AGG | 0.489942 | 2.2:+6858293 | None:intergenic |
TTGTTCCTCCATTTCCAGCT+GGG | 0.490051 | 2.2:+6859344 | None:intergenic |
CTTTCTGAGGGAGCATCGCT+CGG | 0.490804 | 2.2:-6858107 | MS.gene074351:CDS |
GACAATCACGATACCAAGTT+GGG | 0.492005 | 2.2:+6859392 | None:intergenic |
GCTCCAAATGCTGACGGTAG+TGG | 0.492798 | 2.2:-6860017 | MS.gene074351:CDS |
GGTTTGCTTGTATGCCAGCT+GGG | 0.493869 | 2.2:-6856492 | MS.gene074351:CDS |
GAGTTCCTTTCAAAGGCTAC+AGG | 0.495421 | 2.2:-6859813 | MS.gene074351:CDS |
AACAACTCTAGTGGCTCTAC+AGG | 0.497254 | 2.2:-6856724 | MS.gene074351:CDS |
AGAGATGCTAATAGCCCTGC+TGG | 0.498973 | 2.2:-6859957 | MS.gene074351:CDS |
CATTGAGCCTAAGCAGATCA+AGG | 0.500320 | 2.2:-6860495 | MS.gene074351:CDS |
CTACAGGAACTGCTGTCGAT+TGG | 0.500801 | 2.2:-6859797 | MS.gene074351:CDS |
GAGAGACACCTTGATTCGTC+TGG | 0.501967 | 2.2:-6860638 | MS.gene074351:CDS |
ATCTGGTCTTGAAGTAAGCC+AGG | 0.503745 | 2.2:-6857363 | MS.gene074351:CDS |
ATCCCAACCGAATCTGGACC+AGG | 0.505926 | 2.2:+6859619 | None:intergenic |
GAACTTCAAAATTACCCAGC+AGG | 0.508005 | 2.2:+6859942 | None:intergenic |
GCCATTTCTCAAGGTGGCAA+CGG | 0.511290 | 2.2:-6859592 | MS.gene074351:CDS |
TGGTCTGTTCTGAACTGTGA+TGG | 0.511447 | 2.2:-6858385 | MS.gene074351:CDS |
CACTTTGGAAGGTTTGTGAA+AGG | 0.517480 | 2.2:-6859062 | MS.gene074351:intron |
CCAGAAGTGTTAACGCTGGA+TGG | 0.519643 | 2.2:+6857170 | None:intergenic |
GTTCCCAGAAGATGCTCCCT+TGG | 0.524999 | 2.2:-6857568 | MS.gene074351:CDS |
ATCAATTGCGGAGGAGACAT+TGG | 0.525084 | 2.2:-6859838 | MS.gene074351:CDS |
GCAGGATAATGTTGCAGCCA+TGG | 0.526267 | 2.2:-6857252 | MS.gene074351:CDS |
CGACAATCACGATACCAAGT+TGG | 0.529574 | 2.2:+6859391 | None:intergenic |
TAGCCTGGTCCAGATTCGGT+TGG | 0.529759 | 2.2:-6859622 | MS.gene074351:CDS |
CAACTTGGTATCGTGATTGT+CGG | 0.529939 | 2.2:-6859390 | MS.gene074351:CDS |
GCAGAAGCAGGTTTCACAGC+TGG | 0.531459 | 2.2:-6860247 | MS.gene074351:CDS |
AGGTTTGGTTTCAGAATAGG+AGG | 0.531854 | 2.2:-6860475 | MS.gene074351:intron |
TTCTAAACTAACAAGACCAC+AGG | 0.536240 | 2.2:+6859555 | None:intergenic |
AATCAAGCAATCATGCCTCT+TGG | 0.536445 | 2.2:-6857989 | MS.gene074351:CDS |
AAGCACTTACACTAGCTCAA+TGG | 0.536805 | 2.2:-6857118 | MS.gene074351:CDS |
TCTGAAAGCAGTCATTATCT+GGG | 0.537125 | 2.2:-6856998 | MS.gene074351:intron |
ATTGGCAGAGTTCCTTTCAA+AGG | 0.541184 | 2.2:-6859820 | MS.gene074351:CDS |
CCAGGCTGGCCTTGACATGT+TGG | 0.541782 | 2.2:-6856748 | MS.gene074351:CDS |
TCTTAAAAGATCGCCCAACT+TGG | 0.542742 | 2.2:-6859405 | MS.gene074351:CDS |
ATGAGGTCTACGAGGTTCAC+CGG | 0.543253 | 2.2:-6858013 | MS.gene074351:CDS |
GTTGACATGCAGATCCCAGC+TGG | 0.543937 | 2.2:+6856478 | None:intergenic |
GTCAATGGATTCAATGATGA+TGG | 0.544773 | 2.2:-6858409 | MS.gene074351:CDS |
GGTCGAATCAAGTAGCCACT+AGG | 0.545059 | 2.2:+6858970 | None:intergenic |
AGTTCCCTTTCACTCCTTGG+AGG | 0.547829 | 2.2:-6858298 | MS.gene074351:CDS |
GGTGGAGCAAAACTCTCCCC+TGG | 0.550796 | 2.2:-6857149 | MS.gene074351:CDS |
CGGAAACCAGAAGGCACCAA+GGG | 0.551319 | 2.2:+6857552 | None:intergenic |
CAGTTCCTGTAGCCTTTGAA+AGG | 0.551448 | 2.2:+6859808 | None:intergenic |
CTCAGACCTGCAGGTTTAGG+TGG | 0.551972 | 2.2:+6858911 | None:intergenic |
CCAACATGTCAAGGCCAGCC+TGG | 0.554158 | 2.2:+6856748 | None:intergenic |
ATTCGACCATGCGAAGGTGG+AGG | 0.554381 | 2.2:-6858955 | MS.gene074351:CDS |
GCACACTTTACCTATAGCTC+TGG | 0.555699 | 2.2:+6857090 | None:intergenic |
TGGGATCTGCATGTCAACAA+TGG | 0.558119 | 2.2:-6856473 | MS.gene074351:CDS |
TCGATTGGGTCCAGATGCCT+GGG | 0.561065 | 2.2:-6859782 | MS.gene074351:CDS |
AGAAAGCGAACTAAAACAGC+AGG | 0.564715 | 2.2:+6858124 | None:intergenic |
AATTCCTCCAAGGAGTGAAA+GGG | 0.566854 | 2.2:+6858294 | None:intergenic |
TCTGAACTGTGATGGTGCCG+AGG | 0.568521 | 2.2:-6858377 | MS.gene074351:CDS |
TTGCAGATTCCTATCAATTG+CGG | 0.571465 | 2.2:-6859850 | MS.gene074351:intron |
CGACGTACCTGCTCAACCGT+TGG | 0.573623 | 2.2:+6858545 | None:intergenic |
TCAAGAAACAAGTGGTGAAG+TGG | 0.576595 | 2.2:-6858611 | MS.gene074351:CDS |
GCTCAATGTTGGCCAAAACC+GGG | 0.577313 | 2.2:+6860510 | None:intergenic |
TGAGGGAGCATCGCTCGGAG+TGG | 0.578290 | 2.2:-6858102 | MS.gene074351:CDS |
TGGTTAGCAAAGATGAATAC+GGG | 0.580621 | 2.2:+6856768 | None:intergenic |
AATTCAATCAAGAATTTGAG+TGG | 0.580677 | 2.2:-6858337 | MS.gene074351:CDS |
AACAGCAGCAAATCGAACCT+TGG | 0.582279 | 2.2:-6857393 | MS.gene074351:CDS |
CAGGCAACAGCTCATGCTAA+CGG | 0.583410 | 2.2:-6857344 | MS.gene074351:CDS |
GGAGTGGCAGCTCGAGCCTG+TGG | 0.583765 | 2.2:-6859571 | MS.gene074351:CDS |
GATCTGCTTAGGCTCAATGT+TGG | 0.585016 | 2.2:+6860499 | None:intergenic |
ATGGATTCAATGATGATGGC+TGG | 0.585896 | 2.2:-6858405 | MS.gene074351:CDS |
AACTTCAAAATTACCCAGCA+GGG | 0.589166 | 2.2:+6859943 | None:intergenic |
TAGGGAGAAGCAGAGAAAAG+AGG | 0.589529 | 2.2:-6860343 | MS.gene074351:CDS |
GAGTTGTTTCCAACATGTCA+AGG | 0.591719 | 2.2:+6856739 | None:intergenic |
TTGATTCGACCATGCGAAGG+TGG | 0.591810 | 2.2:-6858958 | MS.gene074351:CDS |
ATTGATCCTCCACCTTCGCA+TGG | 0.591908 | 2.2:+6858949 | None:intergenic |
TGTAGACCACCTAAACCTGC+AGG | 0.594819 | 2.2:-6858917 | MS.gene074351:intron |
AAGACCAGATGTCAAATCCA+AGG | 0.596011 | 2.2:+6857376 | None:intergenic |
GTCAGCATTTGGAGCTGCTG+GGG | 0.596788 | 2.2:+6860025 | None:intergenic |
TGTTCAATTGTATGTCCAAG+AGG | 0.596874 | 2.2:+6857974 | None:intergenic |
GCGAACTAAAACAGCAGGAG+TGG | 0.597135 | 2.2:+6858129 | None:intergenic |
CATATGATCAAGCCGTCGCG+TGG | 0.597983 | 2.2:-6856438 | MS.gene074351:CDS |
CACTGAAATAGTAACACCCT+CGG | 0.598397 | 2.2:+6858360 | None:intergenic |
TCCAGCGTTAACACTTCTGG+TGG | 0.599839 | 2.2:-6857167 | MS.gene074351:CDS |
CCGGACATACTGACGTGCCA+TGG | 0.600199 | 2.2:+6857235 | None:intergenic |
CTAAGCCTAGTTCATTGAGA+AGG | 0.603333 | 2.2:-6860553 | MS.gene074351:CDS |
GATTAGGAAGAAGATGGCTA+TGG | 0.605721 | 2.2:-6860693 | None:intergenic |
CTGAACTGTGATGGTGCCGA+GGG | 0.608315 | 2.2:-6858376 | MS.gene074351:CDS |
AATTGAACTTGTTTACACAC+AGG | 0.608400 | 2.2:-6859323 | MS.gene074351:intron |
GTCGAATCAAGTAGCCACTA+GGG | 0.608609 | 2.2:+6858971 | None:intergenic |
TTGCACAGACAATTCCTCCA+AGG | 0.608666 | 2.2:+6858284 | None:intergenic |
ATGTTCCCAGCTGGAAATGG+AGG | 0.609193 | 2.2:-6859349 | MS.gene074351:CDS |
TGTAGTTTCCGCTGTGCAGG+CGG | 0.609536 | 2.2:-6857210 | MS.gene074351:CDS |
GGAATTGATGAGAATGCTGT+GGG | 0.610922 | 2.2:-6857630 | MS.gene074351:CDS |
GCGGAAACCAGAAGGCACCA+AGG | 0.611214 | 2.2:+6857551 | None:intergenic |
TGATTCTCTACCTTCATCCC+AGG | 0.611915 | 2.2:+6859765 | None:intergenic |
AATTGGAGCAAATATGAGCT+CGG | 0.611962 | 2.2:+6857599 | None:intergenic |
CCTATGGCTATCCTGGAATG+AGG | 0.613041 | 2.2:-6858030 | MS.gene074351:CDS |
ATATGCTACTGAAACATTTG+TGG | 0.613265 | 2.2:-6856940 | MS.gene074351:CDS |
CCTCATTCCAGGATAGCCAT+AGG | 0.613471 | 2.2:+6858030 | None:intergenic |
TTTGGAAAACGGCAGTGTTG+TGG | 0.614841 | 2.2:-6859162 | MS.gene074351:intron |
CAGATTCCTATCAATTGCGG+AGG | 0.615563 | 2.2:-6859847 | MS.gene074351:CDS |
TACTTGATTCGACCATGCGA+AGG | 0.621634 | 2.2:-6858961 | MS.gene074351:CDS |
AGGACAATGCGGAAACCAGA+AGG | 0.626123 | 2.2:+6857543 | None:intergenic |
ACATACAATTGAACATGAAG+AGG | 0.627020 | 2.2:-6857966 | MS.gene074351:intron |
CTGAAAGCAGTCATTATCTG+GGG | 0.629010 | 2.2:-6856997 | MS.gene074351:intron |
AAGTGGTGTATAGCATGGGT+CGG | 0.629287 | 2.2:-6858594 | MS.gene074351:CDS |
GACATATGCTCCAATGACGC+TGG | 0.629499 | 2.2:-6859225 | MS.gene074351:CDS |
TAAGTGCTTCTGGAGTGCCA+GGG | 0.631518 | 2.2:+6857132 | None:intergenic |
AATTGATGAGAATGCTGTGG+GGG | 0.634959 | 2.2:-6857628 | MS.gene074351:CDS |
TGGTGAAGTGGTGTATAGCA+TGG | 0.636847 | 2.2:-6858599 | MS.gene074351:CDS |
AAGTGCTTCTGGAGTGCCAG+GGG | 0.637051 | 2.2:+6857133 | None:intergenic |
TTCTCAAGGTGGCAACGGAG+TGG | 0.637931 | 2.2:-6859587 | MS.gene074351:CDS |
GCTGCCTCACAGTTTGCGAG+GGG | 0.640346 | 2.2:-6859003 | MS.gene074351:CDS |
GGCTCTACAGGATATCACAC+TGG | 0.641498 | 2.2:-6856712 | MS.gene074351:CDS |
CGGTAGTGGCGTTGATTCTG+CGG | 0.643778 | 2.2:-6860003 | MS.gene074351:CDS |
CATGTTGGAAACAACTCTAG+TGG | 0.653127 | 2.2:-6856733 | MS.gene074351:CDS |
GCTCTCAAAAGGAAACTGGA+AGG | 0.655094 | 2.2:+6857280 | None:intergenic |
GAGATGCTAATAGCCCTGCT+GGG | 0.656369 | 2.2:-6859956 | MS.gene074351:intron |
TGGAATTGATGAGAATGCTG+TGG | 0.658575 | 2.2:-6857631 | MS.gene074351:CDS |
GGTGAAGTGGTGTATAGCAT+GGG | 0.661299 | 2.2:-6858598 | MS.gene074351:CDS |
ATATTTGCCATTTCTCAAGG+TGG | 0.661399 | 2.2:-6859598 | MS.gene074351:CDS |
CAAGTAGCTCAAGAAACAAG+TGG | 0.662122 | 2.2:-6858619 | MS.gene074351:CDS |
AGCATGCACTTTCCACGCGA+CGG | 0.663627 | 2.2:+6856426 | None:intergenic |
AGCTCAGAGATTGACAATTG+CGG | 0.667204 | 2.2:-6858751 | MS.gene074351:intron |
AGGGGTGAAATGCTCCCTAG+TGG | 0.669242 | 2.2:-6858985 | MS.gene074351:CDS |
AACCAAACCTTGATCTGCTT+AGG | 0.671065 | 2.2:+6860488 | None:intergenic |
CGTTGCAACCGCCTGCACAG+CGG | 0.677613 | 2.2:+6857202 | None:intergenic |
GGAGTGTGCCAGAAGTGCTG+CGG | 0.679106 | 2.2:-6858800 | MS.gene074351:CDS |
ATTCGTCTGGCAAATATGTG+CGG | 0.682465 | 2.2:-6860625 | MS.gene074351:CDS |
TCCACCAGAAGTGTTAACGC+TGG | 0.686791 | 2.2:+6857166 | None:intergenic |
ATTTGCGACGATTCATAGAG+CGG | 0.688818 | 2.2:+6858777 | None:intergenic |
CCAGCAGCTCCAAATGCTGA+CGG | 0.689268 | 2.2:-6860023 | MS.gene074351:CDS |
TGAAAGCAGTCATTATCTGG+GGG | 0.691636 | 2.2:-6856996 | MS.gene074351:intron |
TTCACCCCTCGCAAACTGTG+AGG | 0.692443 | 2.2:+6858999 | None:intergenic |
GAGAATTCAACAGGACAATG+CGG | 0.705796 | 2.2:+6857532 | None:intergenic |
GATGAATAAGCTGTTGATGG+AGG | 0.710323 | 2.2:-6860283 | MS.gene074351:CDS |
ATCCTGGAATGAGGTCTACG+AGG | 0.714524 | 2.2:-6858021 | MS.gene074351:CDS |
GAATTGATGAGAATGCTGTG+GGG | 0.719666 | 2.2:-6857629 | MS.gene074351:CDS |
TGTTGATGGAGGAAAATGAG+AGG | 0.721292 | 2.2:-6860272 | MS.gene074351:CDS |
GGTTTAGGTGGTCTACAATG+TGG | 0.731869 | 2.2:+6858923 | None:intergenic |
GCACAGCGGAAACTACACGC+CGG | 0.741198 | 2.2:+6857216 | None:intergenic |
GGATCTGCATGTCAACAATG+GGG | 0.742598 | 2.2:-6856471 | MS.gene074351:CDS |
CTTGAGCAAGACCTTCAAGG+CGG | 0.775739 | 2.2:+6857797 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAAAATAAGAATATAGT+AGG | + | chr2.2:6858186-6858205 | None:intergenic | 15.0% |
!! | AAATTCAAAACAAAAACAAA+GGG | + | chr2.2:6856619-6856638 | None:intergenic | 15.0% |
!! | ACTAAATGTAAAATTATAGA+AGG | + | chr2.2:6858850-6858869 | None:intergenic | 15.0% |
!! | GATTTAATATAATTTCACTT+TGG | - | chr2.2:6857972-6857991 | MS.gene074351:CDS | 15.0% |
!!! | TTCATTTTCATTCATTATTA+TGG | - | chr2.2:6856879-6856898 | MS.gene074351:intron | 15.0% |
!! | AATGAAAATGAACAATGATA+GGG | + | chr2.2:6856871-6856890 | None:intergenic | 20.0% |
!! | AGTTACATTAAAATCTTTGA+AGG | + | chr2.2:6860231-6860250 | None:intergenic | 20.0% |
!! | ATATTATGATGATTATGACA+TGG | - | chr2.2:6857347-6857366 | MS.gene074351:CDS | 20.0% |
!! | CAAATTCAAAACAAAAACAA+AGG | + | chr2.2:6856620-6856639 | None:intergenic | 20.0% |
!! | GCTCAATAAATGATAAATAA+AGG | + | chr2.2:6857776-6857795 | None:intergenic | 20.0% |
!! | GTAAATATAGTATGAGATAT+TGG | + | chr2.2:6857390-6857409 | None:intergenic | 20.0% |
!! | TAATATAATTTCACTTTGGA+AGG | - | chr2.2:6857976-6857995 | MS.gene074351:CDS | 20.0% |
!! | TAATTGTCATTGTTTGATTA+AGG | - | chr2.2:6856922-6856941 | MS.gene074351:CDS | 20.0% |
!! | TGAAAAATTTCAATAGATTG+TGG | - | chr2.2:6857618-6857637 | MS.gene074351:CDS | 20.0% |
!! | TTTATGTACTTTCTATGATT+TGG | - | chr2.2:6859187-6859206 | MS.gene074351:CDS | 20.0% |
!!! | CATGATTAATATTTTCTTCT+AGG | - | chr2.2:6858223-6858242 | MS.gene074351:intron | 20.0% |
!!! | TGTTGTTTAAAACAAATTTG+AGG | + | chr2.2:6860482-6860501 | None:intergenic | 20.0% |
! | AATATAGTATGAGATATTGG+TGG | + | chr2.2:6857387-6857406 | None:intergenic | 25.0% |
! | AATTCAATCAAGAATTTGAG+TGG | - | chr2.2:6858712-6858731 | MS.gene074351:intron | 25.0% |
! | ACCTACTAAGGTAATTAAAA+AGG | - | chr2.2:6857516-6857535 | MS.gene074351:intron | 25.0% |
! | CCTACTAAGGTAATTAAAAA+GGG | - | chr2.2:6857517-6857536 | MS.gene074351:intron | 25.0% |
! | CTACTAAGGTAATTAAAAAG+GGG | - | chr2.2:6857518-6857537 | MS.gene074351:intron | 25.0% |
! | GAATGAAAATGAACAATGAT+AGG | + | chr2.2:6856872-6856891 | None:intergenic | 25.0% |
! | TACACTACAAATTTGGAAAA+CGG | - | chr2.2:6857876-6857895 | MS.gene074351:intron | 25.0% |
! | TACTATGCTTCATATATGAA+CGG | + | chr2.2:6859591-6859610 | None:intergenic | 25.0% |
! | TTGTTTACTTGCATGTTTAT+TGG | - | chr2.2:6859339-6859358 | MS.gene074351:CDS | 25.0% |
!! | TCTAAGATACACTACAAATT+TGG | - | chr2.2:6857869-6857888 | MS.gene074351:intron | 25.0% |
!! | TTAATATTTTCTTCTAGGCA+TGG | - | chr2.2:6858228-6858247 | MS.gene074351:intron | 25.0% |
!!! | AAGATGATTCTTTTGTTTCT+AGG | - | chr2.2:6859272-6859291 | MS.gene074351:intron | 25.0% |
!!! | AGATGATTCTTTTGTTTCTA+GGG | - | chr2.2:6859273-6859292 | MS.gene074351:intron | 25.0% |
!!! | GTATTTGATTTTTCTCTAAC+CGG | - | chr2.2:6859563-6859582 | MS.gene074351:CDS | 25.0% |
ACATACAATTGAACATGAAG+AGG | - | chr2.2:6859083-6859102 | MS.gene074351:intron | 30.0% | |
ATATGCTACTGAAACATTTG+TGG | - | chr2.2:6860109-6860128 | MS.gene074351:intron | 30.0% | |
ATCATAAAAAGACATGGTCA+AGG | + | chr2.2:6859133-6859152 | None:intergenic | 30.0% | |
ATTTGCATTTGGCTAAGATT+TGG | - | chr2.2:6859164-6859183 | MS.gene074351:CDS | 30.0% | |
CAAGTAAACAAACCATAACA+AGG | + | chr2.2:6859330-6859349 | None:intergenic | 30.0% | |
GTAATTAAAAAGGGGACATA+TGG | - | chr2.2:6857526-6857545 | MS.gene074351:intron | 30.0% | |
GTATTATTAATTCACGACGT+AGG | - | chr2.2:6858334-6858353 | MS.gene074351:CDS | 30.0% | |
TAGTTCTTCTAATCGTTACA+CGG | - | chr2.2:6858866-6858885 | MS.gene074351:intron | 30.0% | |
TCATTTGAACAGTTATGTAC+TGG | - | chr2.2:6859398-6859417 | MS.gene074351:CDS | 30.0% | |
TCTACCATCATAAAAAGACA+TGG | + | chr2.2:6859139-6859158 | None:intergenic | 30.0% | |
TTATGATGATTATGACATGG+AGG | - | chr2.2:6857350-6857369 | MS.gene074351:CDS | 30.0% | |
TTTAAACATCATTCTTGCAG+AGG | - | chr2.2:6858604-6858623 | MS.gene074351:CDS | 30.0% | |
! | AACTGTTCAAATGATGATGA+TGG | + | chr2.2:6859392-6859411 | None:intergenic | 30.0% |
! | AATTGAACTTGTTTACACAC+AGG | - | chr2.2:6857726-6857745 | MS.gene074351:intron | 30.0% |
! | ATGTCCATGATCTCATTTTA+GGG | - | chr2.2:6860170-6860189 | MS.gene074351:intron | 30.0% |
! | TATGTCCATGATCTCATTTT+AGG | - | chr2.2:6860169-6860188 | MS.gene074351:intron | 30.0% |
! | TATTTTATGCTGCTCTTTGA+AGG | - | chr2.2:6860146-6860165 | MS.gene074351:intron | 30.0% |
! | TGTGTTGTGTGAAAAGTTTT+GGG | - | chr2.2:6856638-6856657 | MS.gene074351:intron | 30.0% |
! | TGTTAGTTTAGAACCTACTA+AGG | - | chr2.2:6857504-6857523 | MS.gene074351:intron | 30.0% |
! | TTCTTAGAACTTTTAGCCAA+CGG | - | chr2.2:6858488-6858507 | MS.gene074351:intron | 30.0% |
! | TTGACCATGTCTTTTTATGA+TGG | - | chr2.2:6859132-6859151 | MS.gene074351:intron | 30.0% |
! | TTGTGTTGTGTGAAAAGTTT+TGG | - | chr2.2:6856637-6856656 | MS.gene074351:intron | 30.0% |
!! | CCCTTTTTAATTACCTTAGT+AGG | + | chr2.2:6857520-6857539 | None:intergenic | 30.0% |
!! | TTTAGTTGCGATTTGATTTG+TGG | - | chr2.2:6856664-6856683 | MS.gene074351:CDS | 30.0% |
!!! | GATTTGATTTGTGGCTTTTT+TGG | - | chr2.2:6856673-6856692 | MS.gene074351:CDS | 30.0% |
!!! | TTTTAGGGTACAATTGAATC+TGG | - | chr2.2:6860185-6860204 | MS.gene074351:intron | 30.0% |
AACTTCAAAATTACCCAGCA+GGG | + | chr2.2:6857109-6857128 | None:intergenic | 35.0% | |
AAGTAAGTGCGTAAATCCAT+TGG | - | chr2.2:6858806-6858825 | MS.gene074351:CDS | 35.0% | |
AATTGGAGCAAATATGAGCT+CGG | + | chr2.2:6859453-6859472 | None:intergenic | 35.0% | |
CTGAGATCTGATTCTCTTAT+TGG | - | chr2.2:6860084-6860103 | MS.gene074351:intron | 35.0% | |
CTGGTTAGCAAAGATGAATA+CGG | + | chr2.2:6860285-6860304 | None:intergenic | 35.0% | |
GACTAATGTGATCAATACCA+TGG | - | chr2.2:6858378-6858397 | MS.gene074351:CDS | 35.0% | |
GCATCTCTCAATGAATTCAT+AGG | + | chr2.2:6857080-6857099 | None:intergenic | 35.0% | |
GGTAGATGCATATTTGCATT+TGG | - | chr2.2:6859153-6859172 | MS.gene074351:intron | 35.0% | |
GTGAAGAATCAAACGTGAAT+AGG | - | chr2.2:6857748-6857767 | MS.gene074351:intron | 35.0% | |
TAGGATTCTATTGCAAGCTT+TGG | - | chr2.2:6858353-6858372 | MS.gene074351:CDS | 35.0% | |
TAGTATGAGATATTGGTGGA+AGG | + | chr2.2:6857383-6857402 | None:intergenic | 35.0% | |
TCTGAAAGCAGTCATTATCT+GGG | - | chr2.2:6860051-6860070 | MS.gene074351:intron | 35.0% | |
TGACGTCATATTGTGTTTCA+GGG | - | chr2.2:6859618-6859637 | MS.gene074351:CDS | 35.0% | |
TGGCTTTCTCGTTCATTAAT+TGG | - | chr2.2:6860668-6860687 | MS.gene074351:CDS | 35.0% | |
TGGTTAGCAAAGATGAATAC+GGG | + | chr2.2:6860284-6860303 | None:intergenic | 35.0% | |
TGTAACTTCTCTATCCTGTT+TGG | - | chr2.2:6860244-6860263 | MS.gene074351:CDS | 35.0% | |
TGTACCCTAAAATGAGATCA+TGG | + | chr2.2:6860177-6860196 | None:intergenic | 35.0% | |
TGTTCAATTGTATGTCCAAG+AGG | + | chr2.2:6859078-6859097 | None:intergenic | 35.0% | |
TTAAAAAGGGGACATATGGA+TGG | - | chr2.2:6857530-6857549 | MS.gene074351:CDS | 35.0% | |
TTCTAAACTAACAAGACCAC+AGG | + | chr2.2:6857497-6857516 | None:intergenic | 35.0% | |
TTCTCAATGAACTAGGCTTA+GGG | + | chr2.2:6856497-6856516 | None:intergenic | 35.0% | |
TTGACGTCATATTGTGTTTC+AGG | - | chr2.2:6859617-6859636 | MS.gene074351:CDS | 35.0% | |
TTGCAGATTCCTATCAATTG+CGG | - | chr2.2:6857199-6857218 | MS.gene074351:CDS | 35.0% | |
! | AATGCATTGCTATTGTTGCA+TGG | - | chr2.2:6857928-6857947 | MS.gene074351:intron | 35.0% |
! | AATGGATTTACGCACTTACT+TGG | + | chr2.2:6858807-6858826 | None:intergenic | 35.0% |
! | ATAGTAGGCATTCTAGCTAA+TGG | + | chr2.2:6858171-6858190 | None:intergenic | 35.0% |
! | ATATTTGCCATTTCTCAAGG+TGG | - | chr2.2:6857451-6857470 | MS.gene074351:intron | 35.0% |
! | ATGCATTGCTATTGTTGCAT+GGG | - | chr2.2:6857929-6857948 | MS.gene074351:intron | 35.0% |
! | GTCAATGGATTCAATGATGA+TGG | - | chr2.2:6858640-6858659 | MS.gene074351:CDS | 35.0% |
! | TCAAGGTTTGGTTTCAGAAT+AGG | - | chr2.2:6856571-6856590 | MS.gene074351:intron | 35.0% |
!! | ACAGATTGAAGCTTTGGAAA+AGG | - | chr2.2:6856458-6856477 | MS.gene074351:CDS | 35.0% |
!! | AGCTTTGGAAAAGGTTTATG+TGG | - | chr2.2:6856467-6856486 | MS.gene074351:CDS | 35.0% |
!! | CTAAAAGTTCTAAGAACTGC+AGG | + | chr2.2:6858484-6858503 | None:intergenic | 35.0% |
!!! | CATGCATTTTTTTCGTTCAG+GGG | - | chr2.2:6860536-6860555 | MS.gene074351:CDS | 35.0% |
!!! | GCATGCATTTTTTTCGTTCA+GGG | - | chr2.2:6860535-6860554 | MS.gene074351:CDS | 35.0% |
!!! | TGCATGCATTTTTTTCGTTC+AGG | - | chr2.2:6860534-6860553 | MS.gene074351:CDS | 35.0% |
!!! | TGTTTTAGTTCGCTTTCTGA+GGG | - | chr2.2:6858930-6858949 | MS.gene074351:CDS | 35.0% |
!!! | TTTTTTGGTTTGCAGGTGTA+GGG | - | chr2.2:6856688-6856707 | MS.gene074351:CDS | 35.0% |
AACCAAACCTTGATCTGCTT+AGG | + | chr2.2:6856564-6856583 | None:intergenic | 40.0% | |
AACTAATGATGCCAAACTCG+AGG | + | chr2.2:6860435-6860454 | None:intergenic | 40.0% | |
AAGACCAGATGTCAAATCCA+AGG | + | chr2.2:6859676-6859695 | None:intergenic | 40.0% | |
AAGCACTTACACTAGCTCAA+TGG | - | chr2.2:6859931-6859950 | MS.gene074351:intron | 40.0% | |
AATCAAGCAATCATGCCTCT+TGG | - | chr2.2:6859060-6859079 | MS.gene074351:intron | 40.0% | |
AATTCCTCCAAGGAGTGAAA+GGG | + | chr2.2:6858758-6858777 | None:intergenic | 40.0% | |
AATTGATGAGAATGCTGTGG+GGG | - | chr2.2:6859421-6859440 | MS.gene074351:intron | 40.0% | |
ACAAAGAAACGTGACTCAAC+TGG | + | chr2.2:6859545-6859564 | None:intergenic | 40.0% | |
AGAAAGCGAACTAAAACAGC+AGG | + | chr2.2:6858928-6858947 | None:intergenic | 40.0% | |
AGACAACAGTGTTCATTGCT+TGG | - | chr2.2:6860648-6860667 | MS.gene074351:CDS | 40.0% | |
AGCTCAGAGATTGACAATTG+CGG | - | chr2.2:6858298-6858317 | MS.gene074351:CDS | 40.0% | |
ATTCGTCTGGCAAATATGTG+CGG | - | chr2.2:6856424-6856443 | MS.gene074351:CDS | 40.0% | |
ATTGGCAGAGTTCCTTTCAA+AGG | - | chr2.2:6857229-6857248 | MS.gene074351:CDS | 40.0% | |
ATTTGCGACGATTCATAGAG+CGG | + | chr2.2:6858275-6858294 | None:intergenic | 40.0% | |
CAAACCATAACAAGGATCAG+AGG | + | chr2.2:6859322-6859341 | None:intergenic | 40.0% | |
CAACTGGTTGAGAATTCAAC+AGG | + | chr2.2:6859529-6859548 | None:intergenic | 40.0% | |
CAACTTGGTATCGTGATTGT+CGG | - | chr2.2:6857659-6857678 | MS.gene074351:intron | 40.0% | |
CAAGTAGCTCAAGAAACAAG+TGG | - | chr2.2:6858430-6858449 | MS.gene074351:intron | 40.0% | |
CACTGAAATAGTAACACCCT+CGG | + | chr2.2:6858692-6858711 | None:intergenic | 40.0% | |
CAGACGAGATATAGAAAGAG+AGG | + | chr2.2:6860035-6860054 | None:intergenic | 40.0% | |
CAGATCATTCTGCAAAAAGC+AGG | + | chr2.2:6858565-6858584 | None:intergenic | 40.0% | |
CATATTTGCCAGACGAATCA+AGG | + | chr2.2:6856422-6856441 | None:intergenic | 40.0% | |
CATGTTGGAAACAACTCTAG+TGG | - | chr2.2:6860316-6860335 | MS.gene074351:CDS | 40.0% | |
CGCTATGCTCTTAAAGTAGA+TGG | - | chr2.2:6860502-6860521 | MS.gene074351:CDS | 40.0% | |
CGTATTCATCTTTGCTAACC+AGG | - | chr2.2:6860283-6860302 | MS.gene074351:CDS | 40.0% | |
CTAAGCCTAGTTCATTGAGA+AGG | - | chr2.2:6856496-6856515 | MS.gene074351:CDS | 40.0% | |
CTAGAAATTATCCGCCTTGA+AGG | - | chr2.2:6859241-6859260 | MS.gene074351:intron | 40.0% | |
CTGAAAGCAGTCATTATCTG+GGG | - | chr2.2:6860052-6860071 | MS.gene074351:intron | 40.0% | |
CTTCTCAATGAACTAGGCTT+AGG | + | chr2.2:6856498-6856517 | None:intergenic | 40.0% | |
GAACTTCAAAATTACCCAGC+AGG | + | chr2.2:6857110-6857129 | None:intergenic | 40.0% | |
GAATTGATGAGAATGCTGTG+GGG | - | chr2.2:6859420-6859439 | MS.gene074351:intron | 40.0% | |
GACAATCACGATACCAAGTT+GGG | + | chr2.2:6857660-6857679 | None:intergenic | 40.0% | |
GAGAATTCAACAGGACAATG+CGG | + | chr2.2:6859520-6859539 | None:intergenic | 40.0% | |
GAGCAGCATAAAATAGCATC+TGG | + | chr2.2:6860141-6860160 | None:intergenic | 40.0% | |
GCTTCATATATGAACGGTAC+CGG | + | chr2.2:6859585-6859604 | None:intergenic | 40.0% | |
GGAATTGATGAGAATGCTGT+GGG | - | chr2.2:6859419-6859438 | MS.gene074351:intron | 40.0% | |
GTAGAGAATCATGCTTCTAG+TGG | - | chr2.2:6857296-6857315 | MS.gene074351:CDS | 40.0% | |
GTCTGAAAGCAGTCATTATC+TGG | - | chr2.2:6860050-6860069 | MS.gene074351:intron | 40.0% | |
TAGGGATGTTCATCTCTTAC+AGG | - | chr2.2:6859291-6859310 | MS.gene074351:intron | 40.0% | |
TCAAGAAACAAGTGGTGAAG+TGG | - | chr2.2:6858438-6858457 | MS.gene074351:intron | 40.0% | |
TCTGGGAACATGTCATCAAT+TGG | + | chr2.2:6859470-6859489 | None:intergenic | 40.0% | |
TCTTAAAAGATCGCCCAACT+TGG | - | chr2.2:6857644-6857663 | MS.gene074351:intron | 40.0% | |
TGAAAGCAGTCATTATCTGG+GGG | - | chr2.2:6860053-6860072 | MS.gene074351:intron | 40.0% | |
TGCAAAAAGCAGGCTGAAAT+AGG | + | chr2.2:6858555-6858574 | None:intergenic | 40.0% | |
TGCAGAATGATCTGTTGTGT+TGG | - | chr2.2:6858571-6858590 | MS.gene074351:CDS | 40.0% | |
TGCGATGAATAAGCTGTTGA+TGG | - | chr2.2:6856763-6856782 | MS.gene074351:CDS | 40.0% | |
TGCTGAACAGATTGAAGCTT+TGG | - | chr2.2:6856452-6856471 | MS.gene074351:CDS | 40.0% | |
TGGAATTGATGAGAATGCTG+TGG | - | chr2.2:6859418-6859437 | MS.gene074351:CDS | 40.0% | |
TGTTGCCTTCTCAATGAACT+AGG | + | chr2.2:6856504-6856523 | None:intergenic | 40.0% | |
TTTGAGTGATGCAGCAGAAA+AGG | + | chr2.2:6858992-6859011 | None:intergenic | 40.0% | |
! | AGGTTTGGTTTCAGAATAGG+AGG | - | chr2.2:6856574-6856593 | MS.gene074351:intron | 40.0% |
! | CACTTTGGAAGGTTTGTGAA+AGG | - | chr2.2:6857987-6858006 | MS.gene074351:CDS | 40.0% |
! | GAGTTGTTTCCAACATGTCA+AGG | + | chr2.2:6860313-6860332 | None:intergenic | 40.0% |
! | GATGAATAAGCTGTTGATGG+AGG | - | chr2.2:6856766-6856785 | MS.gene074351:CDS | 40.0% |
! | GGGATATTTGCCATTTCTCA+AGG | - | chr2.2:6857448-6857467 | MS.gene074351:intron | 40.0% |
! | TCAACCATTGTTTGTTAGCC+TGG | - | chr2.2:6857412-6857431 | MS.gene074351:CDS | 40.0% |
! | TCATGCTTCTAGTGGACAAT+TGG | - | chr2.2:6857304-6857323 | MS.gene074351:CDS | 40.0% |
! | TGTTGATGGAGGAAAATGAG+AGG | - | chr2.2:6856777-6856796 | MS.gene074351:CDS | 40.0% |
! | TTTTGCGAAGTTAATGCAGC+AGG | - | chr2.2:6860403-6860422 | MS.gene074351:intron | 40.0% |
!! | ATGGATTCAATGATGATGGC+TGG | - | chr2.2:6858644-6858663 | MS.gene074351:intron | 40.0% |
!! | TTCCAGTTTCCTTTTGAGAG+CGG | - | chr2.2:6859771-6859790 | MS.gene074351:intron | 40.0% |
!!! | CTGTTTTAGTTCGCTTTCTG+AGG | - | chr2.2:6858929-6858948 | MS.gene074351:CDS | 40.0% |
!!! | CTTTTTTGGTTTGCAGGTGT+AGG | - | chr2.2:6856687-6856706 | MS.gene074351:CDS | 40.0% |
!!! | TTGTGGCTTTTTTGGTTTGC+AGG | - | chr2.2:6856681-6856700 | MS.gene074351:CDS | 40.0% |
AACAGCAGCAAATCGAACCT+TGG | - | chr2.2:6859656-6859675 | MS.gene074351:intron | 45.0% | |
AAGTGGTGTATAGCATGGGT+CGG | - | chr2.2:6858455-6858474 | MS.gene074351:intron | 45.0% | |
AATGGATCTGCCAGAGCTAT+AGG | - | chr2.2:6859949-6859968 | MS.gene074351:intron | 45.0% | |
ACAATGTTCCCAGCTGGAAA+TGG | - | chr2.2:6857697-6857716 | MS.gene074351:intron | 45.0% | |
AGCCTAAGCAGATCAAGGTT+TGG | - | chr2.2:6856559-6856578 | MS.gene074351:intron | 45.0% | |
AGGCATGATTGCTTGATTGC+CGG | + | chr2.2:6859058-6859077 | None:intergenic | 45.0% | |
AGTGCGTAAATCCATTGGCA+CGG | - | chr2.2:6858811-6858830 | MS.gene074351:intron | 45.0% | |
ATCAATTGCGGAGGAGACAT+TGG | - | chr2.2:6857211-6857230 | MS.gene074351:CDS | 45.0% | |
ATGTCTCCTCCGCAATTGAT+AGG | + | chr2.2:6857211-6857230 | None:intergenic | 45.0% | |
ATTGTTCCTCCATTTCCAGC+TGG | + | chr2.2:6857709-6857728 | None:intergenic | 45.0% | |
CAATTCCTCCAAGGAGTGAA+AGG | + | chr2.2:6858759-6858778 | None:intergenic | 45.0% | |
CACAGCTGGTGAATGAGAAT+GGG | - | chr2.2:6856816-6856835 | MS.gene074351:intron | 45.0% | |
CAGATTCCTATCAATTGCGG+AGG | - | chr2.2:6857202-6857221 | MS.gene074351:CDS | 45.0% | |
CAGTTCCTGTAGCCTTTGAA+AGG | + | chr2.2:6857244-6857263 | None:intergenic | 45.0% | |
CATCTTGAGCAAGACCTTCA+AGG | + | chr2.2:6859258-6859277 | None:intergenic | 45.0% | |
CATTGAGCCTAAGCAGATCA+AGG | - | chr2.2:6856554-6856573 | MS.gene074351:intron | 45.0% | |
CGAACCTTGGATTTGACATC+TGG | - | chr2.2:6859669-6859688 | MS.gene074351:intron | 45.0% | |
CGACAATCACGATACCAAGT+TGG | + | chr2.2:6857661-6857680 | None:intergenic | 45.0% | |
GAGTTCCTTTCAAAGGCTAC+AGG | - | chr2.2:6857236-6857255 | MS.gene074351:CDS | 45.0% | |
GATCTGCTTAGGCTCAATGT+TGG | + | chr2.2:6856553-6856572 | None:intergenic | 45.0% | |
GCAAATATCCCAACCGAATC+TGG | + | chr2.2:6857439-6857458 | None:intergenic | 45.0% | |
GCACACTTTACCTATAGCTC+TGG | + | chr2.2:6859962-6859981 | None:intergenic | 45.0% | |
GCAGGTAATATCCTCGAGTT+TGG | - | chr2.2:6860421-6860440 | MS.gene074351:intron | 45.0% | |
GCTCTATGAATCGTCGCAAA+TGG | - | chr2.2:6858274-6858293 | MS.gene074351:CDS | 45.0% | |
GCTCTCAAAAGGAAACTGGA+AGG | + | chr2.2:6859772-6859791 | None:intergenic | 45.0% | |
GCTTCCTCTGATCCTTGTTA+TGG | - | chr2.2:6859315-6859334 | MS.gene074351:intron | 45.0% | |
GGATCTGCATGTCAACAATG+GGG | - | chr2.2:6860578-6860597 | MS.gene074351:CDS | 45.0% | |
GGCTTACAGTGTGTAATTGC+TGG | + | chr2.2:6856850-6856869 | None:intergenic | 45.0% | |
GGGATCTGCATGTCAACAAT+GGG | - | chr2.2:6860577-6860596 | MS.gene074351:CDS | 45.0% | |
GGTGAAGTGGTGTATAGCAT+GGG | - | chr2.2:6858451-6858470 | MS.gene074351:intron | 45.0% | |
GGTTTAGGTGGTCTACAATG+TGG | + | chr2.2:6858129-6858148 | None:intergenic | 45.0% | |
GGTTTCAATGACGCTGTCAA+TGG | - | chr2.2:6858625-6858644 | MS.gene074351:CDS | 45.0% | |
GTCGAATCAAGTAGCCACTA+GGG | + | chr2.2:6858081-6858100 | None:intergenic | 45.0% | |
GTTTGTGAAAGGTCACTGTC+TGG | - | chr2.2:6857998-6858017 | MS.gene074351:CDS | 45.0% | |
TAGGGAGAAGCAGAGAAAAG+AGG | - | chr2.2:6856706-6856725 | MS.gene074351:CDS | 45.0% | |
TCACAGCTGGTGAATGAGAA+TGG | - | chr2.2:6856815-6856834 | MS.gene074351:intron | 45.0% | |
TGAGAAGGCAACAGCTGATT+CGG | - | chr2.2:6856511-6856530 | MS.gene074351:intron | 45.0% | |
TGAGCTAGTGTAAGTGCTTC+TGG | + | chr2.2:6859930-6859949 | None:intergenic | 45.0% | |
TGATTCTCTACCTTCATCCC+AGG | + | chr2.2:6857287-6857306 | None:intergenic | 45.0% | |
TGGACCAGGCTAACAAACAA+TGG | + | chr2.2:6857419-6857438 | None:intergenic | 45.0% | |
TGGGATCTGCATGTCAACAA+TGG | - | chr2.2:6860576-6860595 | MS.gene074351:CDS | 45.0% | |
TGGTGAAGTGGTGTATAGCA+TGG | - | chr2.2:6858450-6858469 | MS.gene074351:intron | 45.0% | |
TTCATCTTTGCTAACCAGGC+TGG | - | chr2.2:6860287-6860306 | MS.gene074351:CDS | 45.0% | |
TTGCACAGACAATTCCTCCA+AGG | + | chr2.2:6858768-6858787 | None:intergenic | 45.0% | |
TTGTTCCTCCATTTCCAGCT+GGG | + | chr2.2:6857708-6857727 | None:intergenic | 45.0% | |
TTTGGAAAACGGCAGTGTTG+TGG | - | chr2.2:6857887-6857906 | MS.gene074351:intron | 45.0% | |
! | AACAACTCTAGTGGCTCTAC+AGG | - | chr2.2:6860325-6860344 | MS.gene074351:CDS | 45.0% |
! | CAATACCATGGCTTTTGTGC+AGG | - | chr2.2:6858390-6858409 | MS.gene074351:CDS | 45.0% |
! | CACTTGCTGCAAAACCAAAC+AGG | + | chr2.2:6860261-6860280 | None:intergenic | 45.0% |
! | GTCAACGCACATCGATTGTT+AGG | + | chr2.2:6859744-6859763 | None:intergenic | 45.0% |
! | GTTTTCACAATGTTCCCAGC+TGG | - | chr2.2:6857691-6857710 | MS.gene074351:intron | 45.0% |
! | TACAGGAACTGCTGTCGATT+GGG | - | chr2.2:6857253-6857272 | MS.gene074351:CDS | 45.0% |
! | TACTTGATTCGACCATGCGA+AGG | - | chr2.2:6858088-6858107 | MS.gene074351:CDS | 45.0% |
! | TGGTCTGTTCTGAACTGTGA+TGG | - | chr2.2:6858664-6858683 | MS.gene074351:intron | 45.0% |
! | TTGTTAGCCTGGTCCAGATT+CGG | - | chr2.2:6857423-6857442 | MS.gene074351:intron | 45.0% |
!! | ATCTGGTCTTGAAGTAAGCC+AGG | - | chr2.2:6859686-6859705 | MS.gene074351:intron | 45.0% |
!! | GGCGGATAATTTCTAGCATC+TGG | + | chr2.2:6859237-6859256 | None:intergenic | 45.0% |
AAATGAGAGGCTGCAGAAGC+AGG | - | chr2.2:6856790-6856809 | MS.gene074351:intron | 50.0% | |
AACCTCGTAGACCTCATTCC+AGG | + | chr2.2:6859033-6859052 | None:intergenic | 50.0% | |
AAGTGCCTGCACAAAAGCCA+TGG | + | chr2.2:6858398-6858417 | None:intergenic | 50.0% | |
AGAGATGCTAATAGCCCTGC+TGG | - | chr2.2:6857092-6857111 | MS.gene074351:intron | 50.0% | |
AGGACAATGCGGAAACCAGA+AGG | + | chr2.2:6859509-6859528 | None:intergenic | 50.0% | |
AGGAGTGAAAGGGAACTTGC+TGG | + | chr2.2:6858748-6858767 | None:intergenic | 50.0% | |
AGTTCCCTTTCACTCCTTGG+AGG | - | chr2.2:6858751-6858770 | MS.gene074351:intron | 50.0% | |
ATCCTGGAATGAGGTCTACG+AGG | - | chr2.2:6859028-6859047 | MS.gene074351:CDS | 50.0% | |
ATGAGGTCTACGAGGTTCAC+CGG | - | chr2.2:6859036-6859055 | MS.gene074351:CDS | 50.0% | |
ATGTTCCCAGCTGGAAATGG+AGG | - | chr2.2:6857700-6857719 | MS.gene074351:intron | 50.0% | |
ATTGATCCTCCACCTTCGCA+TGG | + | chr2.2:6858103-6858122 | None:intergenic | 50.0% | |
CAGGCAACAGCTCATGCTAA+CGG | - | chr2.2:6859705-6859724 | MS.gene074351:intron | 50.0% | |
CATTGGCACGGTGCAGTAAA+TGG | - | chr2.2:6858823-6858842 | MS.gene074351:intron | 50.0% | |
CATTTACTGCACCGTGCCAA+TGG | + | chr2.2:6858825-6858844 | None:intergenic | 50.0% | |
CCATCCAGCGTTAACACTTC+TGG | - | chr2.2:6859879-6859898 | MS.gene074351:intron | 50.0% | |
CCTATGGCTATCCTGGAATG+AGG | - | chr2.2:6859019-6859038 | MS.gene074351:CDS | 50.0% | |
CCTCATTCCAGGATAGCCAT+AGG | + | chr2.2:6859022-6859041 | None:intergenic | 50.0% | |
CTACAGGAACTGCTGTCGAT+TGG | - | chr2.2:6857252-6857271 | MS.gene074351:CDS | 50.0% | |
CTCAGCTTCAGAGTGTGAAC+AGG | - | chr2.2:6856732-6856751 | MS.gene074351:CDS | 50.0% | |
CTTGAGCAAGACCTTCAAGG+CGG | + | chr2.2:6859255-6859274 | None:intergenic | 50.0% | |
GAACTCAGACCTGCAGGTTT+AGG | + | chr2.2:6858144-6858163 | None:intergenic | 50.0% | |
GACATATGCTCCAATGACGC+TGG | - | chr2.2:6857824-6857843 | MS.gene074351:intron | 50.0% | |
GACCGCTCTCAAAAGGAAAC+TGG | + | chr2.2:6859776-6859795 | None:intergenic | 50.0% | |
GAGATGCTAATAGCCCTGCT+GGG | - | chr2.2:6857093-6857112 | MS.gene074351:intron | 50.0% | |
GCAAGTTCCCTTTCACTCCT+TGG | - | chr2.2:6858748-6858767 | MS.gene074351:intron | 50.0% | |
GCAGGATAATGTTGCAGCCA+TGG | - | chr2.2:6859797-6859816 | MS.gene074351:CDS | 50.0% | |
GCAGGCTGAAATAGGTTTCG+AGG | + | chr2.2:6858547-6858566 | None:intergenic | 50.0% | |
GCCATTTCTCAAGGTGGCAA+CGG | - | chr2.2:6857457-6857476 | MS.gene074351:intron | 50.0% | |
GCGAACTAAAACAGCAGGAG+TGG | + | chr2.2:6858923-6858942 | None:intergenic | 50.0% | |
GCTCAATGTTGGCCAAAACC+GGG | + | chr2.2:6856542-6856561 | None:intergenic | 50.0% | |
GGCTCAATGTTGGCCAAAAC+CGG | + | chr2.2:6856543-6856562 | None:intergenic | 50.0% | |
GGCTCTACAGGATATCACAC+TGG | - | chr2.2:6860337-6860356 | MS.gene074351:CDS | 50.0% | |
GGTCGAATCAAGTAGCCACT+AGG | + | chr2.2:6858082-6858101 | None:intergenic | 50.0% | |
TCCAGCGTTAACACTTCTGG+TGG | - | chr2.2:6859882-6859901 | MS.gene074351:intron | 50.0% | |
TCCGTTGCCACCTTGAGAAA+TGG | + | chr2.2:6857461-6857480 | None:intergenic | 50.0% | |
TCTGCTGCATCACTCAAAGC+TGG | - | chr2.2:6858994-6859013 | MS.gene074351:CDS | 50.0% | |
TGCAGGCACTTCGCTATATC+AGG | - | chr2.2:6858407-6858426 | MS.gene074351:CDS | 50.0% | |
TGTAGACCACCTAAACCTGC+AGG | - | chr2.2:6858132-6858151 | MS.gene074351:CDS | 50.0% | |
! | CTTTTAGCCAACGGTTGAGC+AGG | - | chr2.2:6858497-6858516 | MS.gene074351:intron | 50.0% |
! | GAAAGGTCACTGTCTGGTTC+TGG | - | chr2.2:6858004-6858023 | MS.gene074351:CDS | 50.0% |
! | GAGAAGGCAACAGCTGATTC+GGG | - | chr2.2:6856512-6856531 | MS.gene074351:intron | 50.0% |
! | GAGAGACACCTTGATTCGTC+TGG | - | chr2.2:6856411-6856430 | MS.gene074351:CDS | 50.0% |
! | GGTTTGCTTGTATGCCAGCT+GGG | - | chr2.2:6860557-6860576 | MS.gene074351:CDS | 50.0% |
! | TCACTCAAAGCTGGCTCCTA+TGG | - | chr2.2:6859003-6859022 | MS.gene074351:CDS | 50.0% |
! | TTGATTCGACCATGCGAAGG+TGG | - | chr2.2:6858091-6858110 | MS.gene074351:CDS | 50.0% |
!! | CCAGAAGTGTTAACGCTGGA+TGG | + | chr2.2:6859882-6859901 | None:intergenic | 50.0% |
!! | TAAGTGCTTCTGGAGTGCCA+GGG | + | chr2.2:6859920-6859939 | None:intergenic | 50.0% |
!! | TCCACCAGAAGTGTTAACGC+TGG | + | chr2.2:6859886-6859905 | None:intergenic | 50.0% |
ACGCCACTACCGTCAGCATT+TGG | + | chr2.2:6857038-6857057 | None:intergenic | 55.0% | |
AGCATGCACTTTCCACGCGA+CGG | + | chr2.2:6860626-6860645 | None:intergenic | 55.0% | |
AGCTGCCTCACAGTTTGCGA+GGG | - | chr2.2:6858045-6858064 | MS.gene074351:CDS | 55.0% | |
AGGGGTGAAATGCTCCCTAG+TGG | - | chr2.2:6858064-6858083 | MS.gene074351:CDS | 55.0% | |
ATCCCAACCGAATCTGGACC+AGG | + | chr2.2:6857433-6857452 | None:intergenic | 55.0% | |
ATTCGACCATGCGAAGGTGG+AGG | - | chr2.2:6858094-6858113 | MS.gene074351:CDS | 55.0% | |
CATATGATCAAGCCGTCGCG+TGG | - | chr2.2:6860611-6860630 | MS.gene074351:CDS | 55.0% | |
CCAGCAGCTCCAAATGCTGA+CGG | - | chr2.2:6857026-6857045 | MS.gene074351:intron | 55.0% | |
CCATGGCACGTCAGTATGTC+CGG | - | chr2.2:6859814-6859833 | MS.gene074351:CDS | 55.0% | |
CGTTAGCATGAGCTGTTGCC+TGG | + | chr2.2:6859707-6859726 | None:intergenic | 55.0% | |
CTACCTTCATCCCAGGCATC+TGG | + | chr2.2:6857280-6857299 | None:intergenic | 55.0% | |
CTCAGACCTGCAGGTTTAGG+TGG | + | chr2.2:6858141-6858160 | None:intergenic | 55.0% | |
GCAGAAGCAGGTTTCACAGC+TGG | - | chr2.2:6856802-6856821 | MS.gene074351:intron | 55.0% | |
GCTCCAAATGCTGACGGTAG+TGG | - | chr2.2:6857032-6857051 | MS.gene074351:intron | 55.0% | |
GGTCAAGAACTCAGACCTGC+AGG | + | chr2.2:6858150-6858169 | None:intergenic | 55.0% | |
GTTCCCAGAAGATGCTCCCT+TGG | - | chr2.2:6859481-6859500 | MS.gene074351:intron | 55.0% | |
GTTGACATGCAGATCCCAGC+TGG | + | chr2.2:6860574-6860593 | None:intergenic | 55.0% | |
TCCTGCAGACCGCTCTCAAA+AGG | + | chr2.2:6859783-6859802 | None:intergenic | 55.0% | |
TCGATTGGGTCCAGATGCCT+GGG | - | chr2.2:6857267-6857286 | MS.gene074351:CDS | 55.0% | |
TGTAGTTTCCGCTGTGCAGG+CGG | - | chr2.2:6859839-6859858 | MS.gene074351:CDS | 55.0% | |
TGTGAGGCAGCTGCAGCATT+AGG | + | chr2.2:6858037-6858056 | None:intergenic | 55.0% | |
TTCACCCCTCGCAAACTGTG+AGG | + | chr2.2:6858053-6858072 | None:intergenic | 55.0% | |
TTCTCAAGGTGGCAACGGAG+TGG | - | chr2.2:6857462-6857481 | MS.gene074351:intron | 55.0% | |
! | AGCCTGGTCCAGATTCGGTT+GGG | - | chr2.2:6857428-6857447 | MS.gene074351:intron | 55.0% |
! | CGTCAGCATTTGGAGCTGCT+GGG | + | chr2.2:6857028-6857047 | None:intergenic | 55.0% |
! | CTGAACTGTGATGGTGCCGA+GGG | - | chr2.2:6858673-6858692 | MS.gene074351:intron | 55.0% |
! | GGGTTTGCTTGTATGCCAGC+TGG | - | chr2.2:6860556-6860575 | MS.gene074351:CDS | 55.0% |
! | GTCAGCATTTGGAGCTGCTG+GGG | + | chr2.2:6857027-6857046 | None:intergenic | 55.0% |
! | TAGCCTGGTCCAGATTCGGT+TGG | - | chr2.2:6857427-6857446 | MS.gene074351:intron | 55.0% |
! | TCTGAACTGTGATGGTGCCG+AGG | - | chr2.2:6858672-6858691 | MS.gene074351:intron | 55.0% |
!! | AAGTGCTTCTGGAGTGCCAG+GGG | + | chr2.2:6859919-6859938 | None:intergenic | 55.0% |
!! | CGGAAACCAGAAGGCACCAA+GGG | + | chr2.2:6859500-6859519 | None:intergenic | 55.0% |
!! | CGGTAGTGGCGTTGATTCTG+CGG | - | chr2.2:6857046-6857065 | MS.gene074351:intron | 55.0% |
!! | CTTTCTGAGGGAGCATCGCT+CGG | - | chr2.2:6858942-6858961 | MS.gene074351:CDS | 55.0% |
!! | GCACCAAGGGAGCATCTTCT+GGG | + | chr2.2:6859487-6859506 | None:intergenic | 55.0% |
!! | GTAAGTGCTTCTGGAGTGCC+AGG | + | chr2.2:6859921-6859940 | None:intergenic | 55.0% |
!! | TCACTGTCTGGTTCTGGTGC+TGG | - | chr2.2:6858010-6858029 | MS.gene074351:CDS | 55.0% |
!! | TCCTTTTGAGAGCGGTCTGC+AGG | - | chr2.2:6859779-6859798 | MS.gene074351:CDS | 55.0% |
CAGCTGCCTCACAGTTTGCG+AGG | - | chr2.2:6858044-6858063 | MS.gene074351:CDS | 60.0% | |
CCAACATGTCAAGGCCAGCC+TGG | + | chr2.2:6860304-6860323 | None:intergenic | 60.0% | |
CCGGACATACTGACGTGCCA+TGG | + | chr2.2:6859817-6859836 | None:intergenic | 60.0% | |
CGACGTACCTGCTCAACCGT+TGG | + | chr2.2:6858507-6858526 | None:intergenic | 60.0% | |
GCACAGCGGAAACTACACGC+CGG | + | chr2.2:6859836-6859855 | None:intergenic | 60.0% | |
GCGTGTAGTTTCCGCTGTGC+AGG | - | chr2.2:6859836-6859855 | MS.gene074351:CDS | 60.0% | |
GCTGCCTCACAGTTTGCGAG+GGG | - | chr2.2:6858046-6858065 | MS.gene074351:CDS | 60.0% | |
GGTCCAGATGCCTGGGATGA+AGG | - | chr2.2:6857274-6857293 | MS.gene074351:CDS | 60.0% | |
GGTGGAGCAAAACTCTCCCC+TGG | - | chr2.2:6859900-6859919 | MS.gene074351:intron | 60.0% | |
GTCGATTGGGTCCAGATGCC+TGG | - | chr2.2:6857266-6857285 | MS.gene074351:CDS | 60.0% | |
! | CCGTCAGCATTTGGAGCTGC+TGG | + | chr2.2:6857029-6857048 | None:intergenic | 60.0% |
! | GCTGGCTCCTATGGCTATCC+TGG | - | chr2.2:6859012-6859031 | MS.gene074351:CDS | 60.0% |
!! | ACAGCTGATTCGGGAGTGCC+CGG | - | chr2.2:6856521-6856540 | MS.gene074351:intron | 60.0% |
!! | CCAGGCTGGCCTTGACATGT+TGG | - | chr2.2:6860301-6860320 | MS.gene074351:CDS | 60.0% |
!! | GATGCTCCCTTGGTGCCTTC+TGG | - | chr2.2:6859491-6859510 | MS.gene074351:intron | 60.0% |
!! | GCGGAAACCAGAAGGCACCA+AGG | + | chr2.2:6859501-6859520 | None:intergenic | 60.0% |
!! | GGAGTGTGCCAGAAGTGCTG+CGG | - | chr2.2:6858249-6858268 | MS.gene074351:intron | 60.0% |
!! | GGCACCAAGGGAGCATCTTC+TGG | + | chr2.2:6859488-6859507 | None:intergenic | 60.0% |
!!! | GATTCGGGAGTGCCCGGTTT+TGG | - | chr2.2:6856527-6856546 | MS.gene074351:intron | 60.0% |
CGAGCAGCAGCCAGCGTCAT+TGG | + | chr2.2:6857837-6857856 | None:intergenic | 65.0% | |
CGCTGTGCAGGCGGTTGCAA+CGG | - | chr2.2:6859848-6859867 | MS.gene074351:intron | 65.0% | |
CGTTGCAACCGCCTGCACAG+CGG | + | chr2.2:6859850-6859869 | None:intergenic | 65.0% | |
TAGAGCGGCCGCAGCACTTC+TGG | + | chr2.2:6858260-6858279 | None:intergenic | 65.0% | |
TGGCTGCTGCTCGCGACTTC+TGG | - | chr2.2:6857844-6857863 | MS.gene074351:intron | 65.0% | |
!! | GAGGGAGCATCGCTCGGAGT+GGG | - | chr2.2:6858948-6858967 | MS.gene074351:CDS | 65.0% |
!! | TGAGGGAGCATCGCTCGGAG+TGG | - | chr2.2:6858947-6858966 | MS.gene074351:CDS | 65.0% |
GGAGTGGCAGCTCGAGCCTG+TGG | - | chr2.2:6857478-6857497 | MS.gene074351:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 6856369 | 6860702 | 6856369 | ID=MS.gene074351 |
chr2.2 | mRNA | 6856369 | 6860702 | 6856369 | ID=MS.gene074351.t1;Parent=MS.gene074351 |
chr2.2 | exon | 6860476 | 6860702 | 6860476 | ID=MS.gene074351.t1.exon1;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6860476 | 6860702 | 6860476 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6860209 | 6860368 | 6860209 | ID=MS.gene074351.t1.exon2;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6860209 | 6860368 | 6860209 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6859957 | 6860048 | 6859957 | ID=MS.gene074351.t1.exon3;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6859957 | 6860048 | 6859957 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6859776 | 6859866 | 6859776 | ID=MS.gene074351.t1.exon4;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6859776 | 6859866 | 6859776 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6859546 | 6859641 | 6859546 | ID=MS.gene074351.t1.exon5;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6859546 | 6859641 | 6859546 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6859324 | 6859437 | 6859324 | ID=MS.gene074351.t1.exon6;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6859324 | 6859437 | 6859324 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6859163 | 6859246 | 6859163 | ID=MS.gene074351.t1.exon7;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6859163 | 6859246 | 6859163 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6858918 | 6859073 | 6858918 | ID=MS.gene074351.t1.exon8;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6858918 | 6859073 | 6858918 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6858752 | 6858826 | 6858752 | ID=MS.gene074351.t1.exon9;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6858752 | 6858826 | 6858752 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6858553 | 6858659 | 6858553 | ID=MS.gene074351.t1.exon10;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6858553 | 6858659 | 6858553 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6858264 | 6858447 | 6858264 | ID=MS.gene074351.t1.exon11;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6858264 | 6858447 | 6858264 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6857967 | 6858155 | 6857967 | ID=MS.gene074351.t1.exon12;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6857967 | 6858155 | 6857967 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6857759 | 6857833 | 6857759 | ID=MS.gene074351.t1.exon13;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6857759 | 6857833 | 6857759 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6857527 | 6857661 | 6857527 | ID=MS.gene074351.t1.exon14;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6857527 | 6857661 | 6857527 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6857101 | 6857432 | 6857101 | ID=MS.gene074351.t1.exon15;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6857101 | 6857432 | 6857101 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6856904 | 6857009 | 6856904 | ID=MS.gene074351.t1.exon16;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6856904 | 6857009 | 6856904 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6856647 | 6856796 | 6856647 | ID=MS.gene074351.t1.exon17;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6856647 | 6856796 | 6856647 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
chr2.2 | exon | 6856369 | 6856515 | 6856369 | ID=MS.gene074351.t1.exon18;Parent=MS.gene074351.t1 |
chr2.2 | CDS | 6856369 | 6856515 | 6856369 | ID=cds.MS.gene074351.t1;Parent=MS.gene074351.t1 |
Gene Sequence |
Protein sequence |