Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074486.t1 | AET01058.2 | 96.1 | 541 | 18 | 2 | 8 | 547 | 235 | 773 | 2.60E-256 | 894.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074486.t1 | Q93YU8 | 26.5 | 411 | 272 | 10 | 128 | 523 | 354 | 749 | 5.8e-31 | 137.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074486.t1 | G7KFE1 | 96.1 | 541 | 18 | 2 | 8 | 547 | 235 | 773 | 1.9e-256 | 894.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051033 | MS.gene074486 | 0.8181 | 2.34E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 119 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTCTGACATAACCTTTC+TGG | 0.154290 | 5.4:+78233251 | None:intergenic |
| CTATGAGTGTCCTTCATATA+TGG | 0.209716 | 5.4:-78233051 | MS.gene074486:CDS |
| GAATTTGCTTCTGCAGCTTC+TGG | 0.249916 | 5.4:+78232945 | None:intergenic |
| TTTCAGAAGGCTTCTGATTC+CGG | 0.264319 | 5.4:-78235581 | MS.gene074486:CDS |
| ATGTCAGAGCATTGAATAAT+TGG | 0.269823 | 5.4:-78233240 | MS.gene074486:CDS |
| CGCTCCACAAGCTATATCTA+TGG | 0.284554 | 5.4:-78235255 | MS.gene074486:CDS |
| ACCAGGCCGGAACGCGGAAT+TGG | 0.309865 | 5.4:+78235646 | None:intergenic |
| TCATTGGAATGATTAGAATT+AGG | 0.326019 | 5.4:+78235794 | None:intergenic |
| TGCAACTGAACCCAGAATTC+TGG | 0.327989 | 5.4:+78233372 | None:intergenic |
| GGAAGAAGGGATTCCTGATT+TGG | 0.328533 | 5.4:-78235873 | MS.gene074486:CDS |
| ATGCCATCAGATGTTTCTTC+AGG | 0.333341 | 5.4:+78233193 | None:intergenic |
| CCGCGTTCCGGCCTGGTAAC+AGG | 0.336574 | 5.4:-78235640 | MS.gene074486:CDS |
| CGCGGAATTGGGCTTAGCTT+TGG | 0.350390 | 5.4:+78235658 | None:intergenic |
| AATTCGAGAAGCCAGAATTC+TGG | 0.366086 | 5.4:-78233383 | MS.gene074486:CDS |
| CGGAAGATAGTCATGACATC+TGG | 0.369030 | 5.4:-78232911 | MS.gene074486:CDS |
| TCATCCTCGTCTTCCAAATC+AGG | 0.371482 | 5.4:+78235860 | None:intergenic |
| CACTTACCCAGCCAGCGAAT+TGG | 0.388742 | 5.4:+78233275 | None:intergenic |
| CCAATCCTACCAGGGGAAAA+GGG | 0.396103 | 5.4:+78233166 | None:intergenic |
| TGCTCTGACATAACCTTTCT+GGG | 0.396292 | 5.4:+78233252 | None:intergenic |
| ACCAATCCTACCAGGGGAAA+AGG | 0.396543 | 5.4:+78233165 | None:intergenic |
| GGTTTAACTCGAACTGTGAT+TGG | 0.398300 | 5.4:-78234749 | MS.gene074486:CDS |
| GGACTTTCCAATTCGCTGGC+TGG | 0.406629 | 5.4:-78233282 | MS.gene074486:CDS |
| TACATATTACAAATATTTGT+GGG | 0.407011 | 5.4:+78233140 | None:intergenic |
| ATGTTTCTTCAGGTTCATAT+AGG | 0.408099 | 5.4:+78233203 | None:intergenic |
| GAAACTCTATCAGGAAGTTA+AGG | 0.411276 | 5.4:-78235227 | MS.gene074486:intron |
| CGAGGATGAAGTTGTTAAAC+AGG | 0.418339 | 5.4:-78235846 | MS.gene074486:CDS |
| GAAGCTGCAGAAGCAAATTC+AGG | 0.418450 | 5.4:-78232942 | MS.gene074486:CDS |
| TAATCAGTGGTCTCAAGCTT+TGG | 0.420044 | 5.4:-78233119 | MS.gene074486:CDS |
| ACCATGATCATGATGATCAT+TGG | 0.421527 | 5.4:+78235778 | None:intergenic |
| CCAGGCCGGAACGCGGAATT+GGG | 0.422096 | 5.4:+78235647 | None:intergenic |
| GCAGCTGAAGGGATTGATCC+AGG | 0.429630 | 5.4:-78234636 | MS.gene074486:CDS |
| TACTTCCAAGATGTTGCATC+TGG | 0.432326 | 5.4:-78235392 | MS.gene074486:CDS |
| ATGGGAGAAGAAACTCTATC+AGG | 0.432590 | 5.4:-78235236 | MS.gene074486:CDS |
| ATCGAAGCTTTCCAACTTCG+AGG | 0.437391 | 5.4:+78235540 | None:intergenic |
| AAGGATGTGAGGGAGGAAGA+AGG | 0.445552 | 5.4:-78235887 | MS.gene074486:CDS |
| AGGATGTGAGGGAGGAAGAA+GGG | 0.450088 | 5.4:-78235886 | MS.gene074486:CDS |
| AATTGGACTTTCCAATTCGC+TGG | 0.453198 | 5.4:-78233286 | MS.gene074486:CDS |
| GACTTTCCAATTCGCTGGCT+GGG | 0.457914 | 5.4:-78233281 | MS.gene074486:CDS |
| CTAAGCCCAATTCCGCGTTC+CGG | 0.458997 | 5.4:-78235652 | MS.gene074486:CDS |
| ATTCGAGAAGCCAGAATTCT+GGG | 0.459531 | 5.4:-78233382 | MS.gene074486:CDS |
| CTATGACGATAAATAAGATA+AGG | 0.466081 | 5.4:-78234676 | MS.gene074486:CDS |
| CCCAATTCCGCGTTCCGGCC+TGG | 0.466451 | 5.4:-78235647 | MS.gene074486:CDS |
| TATCTTGTTCCCATATATGA+AGG | 0.475356 | 5.4:+78233041 | None:intergenic |
| AGCAACCAGATGCAACATCT+TGG | 0.476022 | 5.4:+78235387 | None:intergenic |
| TATGACGATAAATAAGATAA+GGG | 0.482363 | 5.4:-78234675 | MS.gene074486:CDS |
| CCCTCACATCCTTTGAATCC+CGG | 0.483045 | 5.4:+78235897 | None:intergenic |
| TTGAACAAGAGCTTATCAAT+TGG | 0.486817 | 5.4:-78233303 | MS.gene074486:CDS |
| AAATGCGGGTCATTCATGAT+AGG | 0.488298 | 5.4:-78234826 | MS.gene074486:CDS |
| TATGAGTGTCCTTCATATAT+GGG | 0.489735 | 5.4:-78233050 | MS.gene074486:CDS |
| TTTGGATAGAATATCTGAAA+AGG | 0.493275 | 5.4:-78233101 | MS.gene074486:CDS |
| TCCAATGATCATCATGATCA+TGG | 0.495308 | 5.4:-78235779 | MS.gene074486:CDS |
| TCAAGAGGGTTCCTGTTACC+AGG | 0.499342 | 5.4:+78235629 | None:intergenic |
| AAGCTCTTGTTCAAGCTGCT+TGG | 0.501492 | 5.4:+78233312 | None:intergenic |
| ATCGCGCATATCCTCGAAGT+TGG | 0.501767 | 5.4:-78235551 | MS.gene074486:CDS |
| TTACATATTACAAATATTTG+TGG | 0.505726 | 5.4:+78233139 | None:intergenic |
| TCCACGCTATTAGCATCAAC+GGG | 0.514795 | 5.4:+78235322 | None:intergenic |
| TTGGAATGATTAGAATTAGG+TGG | 0.520407 | 5.4:+78235797 | None:intergenic |
| ATCCACGCTATTAGCATCAA+CGG | 0.521538 | 5.4:+78235321 | None:intergenic |
| CACCCACGGCTACACCTAGC+CGG | 0.529747 | 5.4:-78235916 | MS.gene074486:CDS |
| TACACCTAGCCGGGATTCAA+AGG | 0.532387 | 5.4:-78235906 | MS.gene074486:CDS |
| GGAAGATAGTCATGACATCT+GGG | 0.533944 | 5.4:-78232910 | MS.gene074486:CDS |
| TGTGGGGCACCAATCCTACC+AGG | 0.536953 | 5.4:+78233157 | None:intergenic |
| TGACAAAAGCAGTAACCTAC+AGG | 0.538263 | 5.4:-78232843 | MS.gene074486:CDS |
| GAAGACACCACAGACGATGA+AGG | 0.540141 | 5.4:+78235364 | None:intergenic |
| TGGAATGATTAGAATTAGGT+GGG | 0.541054 | 5.4:+78235798 | None:intergenic |
| GATATGCGCGATATGTGAAC+CGG | 0.543403 | 5.4:+78235562 | None:intergenic |
| ATGACATCTGGGGAAGGTAA+AGG | 0.544284 | 5.4:-78232899 | MS.gene074486:CDS |
| ATTTCTCTGGCAACCTCAAG+AGG | 0.544709 | 5.4:+78235614 | None:intergenic |
| ACCCACGGCTACACCTAGCC+GGG | 0.551409 | 5.4:-78235915 | MS.gene074486:CDS |
| AGAACTGTGGCCGCAGCTGA+AGG | 0.553134 | 5.4:-78234648 | MS.gene074486:CDS |
| TCTCCCATAGATATAGCTTG+TGG | 0.553280 | 5.4:+78235251 | None:intergenic |
| CTAAAGCGTTTAGAAGAAAG+AGG | 0.555612 | 5.4:-78234791 | MS.gene074486:CDS |
| GAACTGTGGCCGCAGCTGAA+GGG | 0.564185 | 5.4:-78234647 | MS.gene074486:CDS |
| ATCCCGGCTAGGTGTAGCCG+TGG | 0.566699 | 5.4:+78235913 | None:intergenic |
| ACATATTACAAATATTTGTG+GGG | 0.567125 | 5.4:+78233141 | None:intergenic |
| AGAGCTAAGATTGCGCGACC+TGG | 0.573005 | 5.4:+78235279 | None:intergenic |
| CAGCTGAAGGGATTGATCCA+GGG | 0.577103 | 5.4:-78234635 | MS.gene074486:CDS |
| CTTACGAGGAGCTGCTACAA+CGG | 0.579087 | 5.4:-78232763 | MS.gene074486:CDS |
| GAGGGTTCCTGTTACCAGGC+CGG | 0.584922 | 5.4:+78235633 | None:intergenic |
| AAACTCAATCATGATTTCGA+GGG | 0.585049 | 5.4:+78232723 | None:intergenic |
| ACATCCTTTGAATCCCGGCT+AGG | 0.586247 | 5.4:+78235902 | None:intergenic |
| GAAACTCAATCATGATTTCG+AGG | 0.587026 | 5.4:+78232722 | None:intergenic |
| GCTCCACAAGCTATATCTAT+GGG | 0.591800 | 5.4:-78235254 | MS.gene074486:CDS |
| ACTACGATGGCACTCAAGCA+TGG | 0.592246 | 5.4:+78233417 | None:intergenic |
| CAATCCTACCAGGGGAAAAG+GGG | 0.593064 | 5.4:+78233167 | None:intergenic |
| GGTTGCTCCTTCATCGTCTG+TGG | 0.593780 | 5.4:-78235371 | MS.gene074486:CDS |
| TCATGATCATGGTCATCTTG+AGG | 0.598531 | 5.4:-78235768 | MS.gene074486:CDS |
| CCGGGATTCAAAGGATGTGA+GGG | 0.599644 | 5.4:-78235897 | MS.gene074486:CDS |
| TGGTAACAGGAACCCTCTTG+AGG | 0.600072 | 5.4:-78235627 | MS.gene074486:CDS |
| AGCTGAAGGGATTGATCCAG+GGG | 0.603427 | 5.4:-78234634 | MS.gene074486:intron |
| TGAATCTTTGAGAGCTTACG+AGG | 0.606759 | 5.4:-78232777 | MS.gene074486:CDS |
| GGCTGGGTAAGTGCCCAGAA+AGG | 0.607470 | 5.4:-78233265 | MS.gene074486:CDS |
| AGCAAATTCAGGCATTAGAG+CGG | 0.608903 | 5.4:-78232931 | MS.gene074486:CDS |
| ACCCGTTGATGCTAATAGCG+TGG | 0.611422 | 5.4:-78235323 | MS.gene074486:CDS |
| GCCGGGATTCAAAGGATGTG+AGG | 0.611615 | 5.4:-78235898 | MS.gene074486:CDS |
| GAAGTTGTTAAACAGGTACA+TGG | 0.613510 | 5.4:-78235839 | MS.gene074486:CDS |
| TTTCTCTGGCAACCTCAAGA+GGG | 0.614671 | 5.4:+78235615 | None:intergenic |
| TCCCGGCTAGGTGTAGCCGT+GGG | 0.615427 | 5.4:+78235914 | None:intergenic |
| GTTGCATCCAGAAAGAAAAG+TGG | 0.618402 | 5.4:-78233355 | MS.gene074486:CDS |
| TTGACGTTGAACTCACGACC+AGG | 0.620407 | 5.4:-78235297 | MS.gene074486:CDS |
| CCTGTTACCAGGCCGGAACG+CGG | 0.630205 | 5.4:+78235640 | None:intergenic |
| GAACCTGAAGAAACATCTGA+TGG | 0.633107 | 5.4:-78233196 | MS.gene074486:CDS |
| ACTCATAGTAAATACATGCA+TGG | 0.635822 | 5.4:+78233066 | None:intergenic |
| GGTGTGTATTGCGTCATCTG+TGG | 0.637398 | 5.4:+78235935 | None:intergenic |
| AACTCAATCATGATTTCGAG+GGG | 0.642782 | 5.4:+78232724 | None:intergenic |
| TTGCTTCGCATTGACTACGA+TGG | 0.643703 | 5.4:+78233404 | None:intergenic |
| TGGATCAATCCCTTCAGCTG+CGG | 0.644952 | 5.4:+78234638 | None:intergenic |
| GATTCCTGATTTGGAAGACG+AGG | 0.647664 | 5.4:-78235864 | MS.gene074486:CDS |
| ATAGTCATGACATCTGGGGA+AGG | 0.655562 | 5.4:-78232905 | MS.gene074486:CDS |
| TATTTGTAATATGTAATCAG+TGG | 0.656136 | 5.4:-78233132 | MS.gene074486:CDS |
| GGATTCAAAGGATGTGAGGG+AGG | 0.667509 | 5.4:-78235894 | MS.gene074486:CDS |
| AAGCTTCGATATCATCACAA+AGG | 0.672556 | 5.4:-78235527 | MS.gene074486:intron |
| TACGCTGCAAACTAGCCTGT+AGG | 0.677274 | 5.4:+78232828 | None:intergenic |
| GTGGGGCACCAATCCTACCA+GGG | 0.679503 | 5.4:+78233158 | None:intergenic |
| TGGGGCACCAATCCTACCAG+GGG | 0.682053 | 5.4:+78233159 | None:intergenic |
| GATGACGCAATACACACCCA+CGG | 0.696512 | 5.4:-78235930 | MS.gene074486:CDS |
| GAAGATAGTCATGACATCTG+GGG | 0.713324 | 5.4:-78232909 | MS.gene074486:CDS |
| TCAGCAGCTGATACAGAACA+AGG | 0.716259 | 5.4:-78233005 | MS.gene074486:CDS |
| AGATAAGGGATGAAGAACTG+TGG | 0.720407 | 5.4:-78234661 | MS.gene074486:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTGTTCATATTTATAAA+AGG | - | chr5.4:78234225-78234244 | MS.gene074486:intron | 10.0% |
| !! | TTTCATAATTATGATAAAAA+AGG | - | chr5.4:78234375-78234394 | MS.gene074486:intron | 10.0% |
| !! | TACATATTACAAATATTTGT+GGG | + | chr5.4:78235596-78235615 | None:intergenic | 15.0% |
| !! | TATAGTATATAAAAATGATC+AGG | + | chr5.4:78234183-78234202 | None:intergenic | 15.0% |
| !! | TTACATATTACAAATATTTG+TGG | + | chr5.4:78235597-78235616 | None:intergenic | 15.0% |
| !!! | ATCAAAATAAGTTTTTAATG+GGG | + | chr5.4:78234332-78234351 | None:intergenic | 15.0% |
| !!! | CTTTTTCAATGTTTATTTAT+TGG | - | chr5.4:78233868-78233887 | MS.gene074486:intron | 15.0% |
| !!! | GATCAAAATAAGTTTTTAAT+GGG | + | chr5.4:78234333-78234352 | None:intergenic | 15.0% |
| !!! | TGATCAAAATAAGTTTTTAA+TGG | + | chr5.4:78234334-78234353 | None:intergenic | 15.0% |
| !! | AAAAATAAAATGAACAGACA+TGG | + | chr5.4:78235139-78235158 | None:intergenic | 20.0% |
| !! | ACATATTACAAATATTTGTG+GGG | + | chr5.4:78235595-78235614 | None:intergenic | 20.0% |
| !! | ACATTTACATATAAGAACAT+TGG | + | chr5.4:78235100-78235119 | None:intergenic | 20.0% |
| !! | ACCAAATTATATAGAAGTTA+TGG | + | chr5.4:78234831-78234850 | None:intergenic | 20.0% |
| !! | ACCATAACTTCTATATAATT+TGG | - | chr5.4:78234827-78234846 | MS.gene074486:CDS | 20.0% |
| !! | ATAACTTCTATATAATTTGG+TGG | - | chr5.4:78234830-78234849 | MS.gene074486:CDS | 20.0% |
| !! | ATTTATGAGTTTCTATAACA+AGG | - | chr5.4:78233845-78233864 | MS.gene074486:intron | 20.0% |
| !! | CAATAATATTAAGTACATAG+TGG | + | chr5.4:78234211-78234230 | None:intergenic | 20.0% |
| !! | TATGACGATAAATAAGATAA+GGG | - | chr5.4:78234058-78234077 | MS.gene074486:intron | 20.0% |
| !! | TATTTGTAATATGTAATCAG+TGG | - | chr5.4:78235601-78235620 | MS.gene074486:CDS | 20.0% |
| !!! | ATTTTTTCTCGAATGTTTTA+TGG | + | chr5.4:78234560-78234579 | None:intergenic | 20.0% |
| !!! | CTCTTTTAGAATAAAATGAT+TGG | + | chr5.4:78233603-78233622 | None:intergenic | 20.0% |
| !!! | TTTTTTCTCGAATGTTTTAT+GGG | + | chr5.4:78234559-78234578 | None:intergenic | 20.0% |
| ! | AAAAAGAATCTGAATTTCTC+TGG | + | chr5.4:78233135-78233154 | None:intergenic | 25.0% |
| ! | AAACAAAACCAAAATCGAAT+CGG | + | chr5.4:78233571-78233590 | None:intergenic | 25.0% |
| ! | AACATTCGAGAAAAAATTAG+TGG | - | chr5.4:78234563-78234582 | MS.gene074486:intron | 25.0% |
| ! | AATTAGTGGAAGGAATTATT+TGG | - | chr5.4:78234577-78234596 | MS.gene074486:intron | 25.0% |
| ! | ACTTAACTTAATAGTGTGAT+TGG | + | chr5.4:78233678-78233697 | None:intergenic | 25.0% |
| ! | AGGAATGAGAAATATAATGT+AGG | + | chr5.4:78233267-78233286 | None:intergenic | 25.0% |
| ! | ATAAATAAAAAACCTCAGGA+AGG | + | chr5.4:78233747-78233766 | None:intergenic | 25.0% |
| ! | ATCTGCTATACATGTAATTT+CGG | - | chr5.4:78234723-78234742 | MS.gene074486:CDS | 25.0% |
| ! | CTATGACGATAAATAAGATA+AGG | - | chr5.4:78234057-78234076 | MS.gene074486:intron | 25.0% |
| ! | GGAATGAGAAATATAATGTA+GGG | + | chr5.4:78233266-78233285 | None:intergenic | 25.0% |
| ! | GTCACGAATATATCTAAAAA+TGG | + | chr5.4:78234414-78234433 | None:intergenic | 25.0% |
| ! | GTGCAAAACTATGTATAATT+TGG | + | chr5.4:78234865-78234884 | None:intergenic | 25.0% |
| ! | TCAGGAATAGAGAAAATTTA+AGG | + | chr5.4:78234165-78234184 | None:intergenic | 25.0% |
| ! | TCATTGGAATGATTAGAATT+AGG | + | chr5.4:78232942-78232961 | None:intergenic | 25.0% |
| ! | TTTGGATAGAATATCTGAAA+AGG | - | chr5.4:78235632-78235651 | MS.gene074486:CDS | 25.0% |
| ! | TTTGTAAAAGATAGTTCATC+TGG | + | chr5.4:78234900-78234919 | None:intergenic | 25.0% |
| !! | AATGTTTATTTATTGGCTAC+AGG | - | chr5.4:78233875-78233894 | MS.gene074486:intron | 25.0% |
| !! | GATACACAGGTTATATTTTA+AGG | + | chr5.4:78234988-78235007 | None:intergenic | 25.0% |
| !! | TTTTTCTCGAATGTTTTATG+GGG | + | chr5.4:78234558-78234577 | None:intergenic | 25.0% |
| !!! | AACAAGGAGTATTTTACATT+GGG | + | chr5.4:78235073-78235092 | None:intergenic | 25.0% |
| !!! | AATTCAGATTCTTTTTCAGA+AGG | - | chr5.4:78233139-78233158 | MS.gene074486:CDS | 25.0% |
| AAAATCCGAACTACTAAAAG+TGG | + | chr5.4:78234508-78234527 | None:intergenic | 30.0% | |
| AAATCCGAACTACTAAAAGT+GGG | + | chr5.4:78234507-78234526 | None:intergenic | 30.0% | |
| ACTCATAGTAAATACATGCA+TGG | + | chr5.4:78235670-78235689 | None:intergenic | 30.0% | |
| ATATAGAAGAGATATGCTGA+TGG | + | chr5.4:78234619-78234638 | None:intergenic | 30.0% | |
| ATGAATATCACATGCATGTT+TGG | + | chr5.4:78235196-78235215 | None:intergenic | 30.0% | |
| ATTCATCCAAGCATAGAATT+TGG | - | chr5.4:78235214-78235233 | MS.gene074486:intron | 30.0% | |
| GAAATTACATGTATAGCAGA+TGG | + | chr5.4:78234724-78234743 | None:intergenic | 30.0% | |
| GCAGATAAATAAAAAACCTC+AGG | + | chr5.4:78233751-78233770 | None:intergenic | 30.0% | |
| TATCTTGTTCCCATATATGA+AGG | + | chr5.4:78235695-78235714 | None:intergenic | 30.0% | |
| TATGAGTGTCCTTCATATAT+GGG | - | chr5.4:78235683-78235702 | MS.gene074486:CDS | 30.0% | |
| TCTCTCCACAAAAATAAGTA+TGG | - | chr5.4:78234010-78234029 | MS.gene074486:intron | 30.0% | |
| TGGAATGATTAGAATTAGGT+GGG | + | chr5.4:78232938-78232957 | None:intergenic | 30.0% | |
| TTCGAGAAAAAATTAGTGGA+AGG | - | chr5.4:78234567-78234586 | MS.gene074486:intron | 30.0% | |
| TTGAACAAGAGCTTATCAAT+TGG | - | chr5.4:78235430-78235449 | MS.gene074486:intron | 30.0% | |
| TTGGAATGATTAGAATTAGG+TGG | + | chr5.4:78232939-78232958 | None:intergenic | 30.0% | |
| ! | AAATCCCAAGTAGAAGTTTT+TGG | + | chr5.4:78232744-78232763 | None:intergenic | 30.0% |
| ! | AGTATTTTACATTGGGTAAC+TGG | + | chr5.4:78235066-78235085 | None:intergenic | 30.0% |
| ! | ATGTTTCTTCAGGTTCATAT+AGG | + | chr5.4:78235533-78235552 | None:intergenic | 30.0% |
| ! | ATTTCTAGGTAAAGCTCTAA+TGG | + | chr5.4:78234938-78234957 | None:intergenic | 30.0% |
| ! | TACACTAAGAGACAGATTTT+TGG | - | chr5.4:78233629-78233648 | MS.gene074486:intron | 30.0% |
| ! | TAGTTTAGAACACACAAGAA+CGG | + | chr5.4:78233793-78233812 | None:intergenic | 30.0% |
| ! | TTTCTAGGTAAAGCTCTAAT+GGG | + | chr5.4:78234937-78234956 | None:intergenic | 30.0% |
| !! | ATGTCAGAGCATTGAATAAT+TGG | - | chr5.4:78235493-78235512 | MS.gene074486:intron | 30.0% |
| !! | TATTTCTCACTTTTCTCTCA+AGG | + | chr5.4:78235755-78235774 | None:intergenic | 30.0% |
| !! | TCCATAATTCTTTGAAACCA+GGG | - | chr5.4:78234680-78234699 | MS.gene074486:CDS | 30.0% |
| !!! | CAACAAGGAGTATTTTACAT+TGG | + | chr5.4:78235074-78235093 | None:intergenic | 30.0% |
| !!! | GATTGCCATACTTATTTTTG+TGG | + | chr5.4:78234018-78234037 | None:intergenic | 30.0% |
| AAACCAAAATCGAATCGGAT+TGG | + | chr5.4:78233566-78233585 | None:intergenic | 35.0% | |
| AACACTCCAAATTCTATGCT+TGG | + | chr5.4:78235223-78235242 | None:intergenic | 35.0% | |
| AAGCTTCGATATCATCACAA+AGG | - | chr5.4:78233206-78233225 | MS.gene074486:CDS | 35.0% | |
| ACCATGATCATGATGATCAT+TGG | + | chr5.4:78232958-78232977 | None:intergenic | 35.0% | |
| ACCCTGGTTTCAAAGAATTA+TGG | + | chr5.4:78234684-78234703 | None:intergenic | 35.0% | |
| CAAGCAAAATTGTGTACAGA+AGG | + | chr5.4:78234263-78234282 | None:intergenic | 35.0% | |
| CGTGCATTATATTCTTTCCT+GGG | - | chr5.4:78234475-78234494 | MS.gene074486:intron | 35.0% | |
| CTATGAGTGTCCTTCATATA+TGG | - | chr5.4:78235682-78235701 | MS.gene074486:CDS | 35.0% | |
| GAAACTCTATCAGGAAGTTA+AGG | - | chr5.4:78233506-78233525 | MS.gene074486:intron | 35.0% | |
| GAAAGAATATAATGCACGAC+TGG | + | chr5.4:78234473-78234492 | None:intergenic | 35.0% | |
| GAAGTTGTTAAACAGGTACA+TGG | - | chr5.4:78232894-78232913 | MS.gene074486:CDS | 35.0% | |
| GAGTGTTTGTGCATAATGTT+TGG | - | chr5.4:78235236-78235255 | MS.gene074486:CDS | 35.0% | |
| GCTTGATGTTATTGCAATCT+TGG | - | chr5.4:78234278-78234297 | MS.gene074486:intron | 35.0% | |
| GGAACTAGTACAAACAAGAT+TGG | + | chr5.4:78234144-78234163 | None:intergenic | 35.0% | |
| GTGCATTATATTCTTTCCTG+GGG | - | chr5.4:78234476-78234495 | MS.gene074486:intron | 35.0% | |
| TAAAAGATAGTTCATCTGGC+AGG | + | chr5.4:78234896-78234915 | None:intergenic | 35.0% | |
| TATTCGTGACTCAAGAATTG+TGG | - | chr5.4:78234424-78234443 | MS.gene074486:intron | 35.0% | |
| TCAAGTCAATTCATCATGTC+AGG | + | chr5.4:78233287-78233306 | None:intergenic | 35.0% | |
| TCCAATGATCATCATGATCA+TGG | - | chr5.4:78232954-78232973 | MS.gene074486:CDS | 35.0% | |
| TCCTCCAAAAACTTCTACTT+GGG | - | chr5.4:78232737-78232756 | MS.gene074486:CDS | 35.0% | |
| TCGTGCATTATATTCTTTCC+TGG | - | chr5.4:78234474-78234493 | MS.gene074486:intron | 35.0% | |
| TGGTGATCTAATTTAGTGAC+AGG | + | chr5.4:78233546-78233565 | None:intergenic | 35.0% | |
| TTGTTAAGTTAACATACCCC+TGG | + | chr5.4:78234118-78234137 | None:intergenic | 35.0% | |
| ! | AATCTTGGTAATCATTGAGG+TGG | - | chr5.4:78234293-78234312 | MS.gene074486:intron | 35.0% |
| ! | CTAAAGCGTTTAGAAGAAAG+AGG | - | chr5.4:78233942-78233961 | MS.gene074486:intron | 35.0% |
| ! | GTTTGAAGTACTAATGCACA+AGG | - | chr5.4:78234657-78234676 | MS.gene074486:CDS | 35.0% |
| ! | TAAGAACATTGGTGACAACA+AGG | + | chr5.4:78235089-78235108 | None:intergenic | 35.0% |
| ! | TAAGGTTCCTCTTGATGATT+GGG | + | chr5.4:78234970-78234989 | None:intergenic | 35.0% |
| ! | TGCAATCTTGGTAATCATTG+AGG | - | chr5.4:78234290-78234309 | MS.gene074486:intron | 35.0% |
| ! | TTAAGGTTCCTCTTGATGAT+TGG | + | chr5.4:78234971-78234990 | None:intergenic | 35.0% |
| ! | TTCTAGGTAAAGCTCTAATG+GGG | + | chr5.4:78234936-78234955 | None:intergenic | 35.0% |
| ! | TTTTACATTGGGTAACTGGA+TGG | + | chr5.4:78235062-78235081 | None:intergenic | 35.0% |
| !! | ACTATCACCACTTTTCTTTC+TGG | + | chr5.4:78235388-78235407 | None:intergenic | 35.0% |
| !! | ACTTCCCACTTTTAGTAGTT+CGG | - | chr5.4:78234500-78234519 | MS.gene074486:intron | 35.0% |
| !! | GTCCATAATTCTTTGAAACC+AGG | - | chr5.4:78234679-78234698 | MS.gene074486:CDS | 35.0% |
| !! | TAGTTTGCAGCGTATTTTTG+AGG | - | chr5.4:78235914-78235933 | MS.gene074486:CDS | 35.0% |
| !!! | GGTGCTGATTTTGATAAAGT+TGG | - | chr5.4:78233963-78233982 | MS.gene074486:intron | 35.0% |
| !!! | TTTTCAGGTTTAGCAGAATG+TGG | - | chr5.4:78235289-78235308 | MS.gene074486:CDS | 35.0% |
| AAATGCGGGTCATTCATGAT+AGG | - | chr5.4:78233907-78233926 | MS.gene074486:intron | 40.0% | |
| AATTCGAGAAGCCAGAATTC+TGG | - | chr5.4:78235350-78235369 | MS.gene074486:CDS | 40.0% | |
| AATTGGACTTTCCAATTCGC+TGG | - | chr5.4:78235447-78235466 | MS.gene074486:intron | 40.0% | |
| AGATAAGGGATGAAGAACTG+TGG | - | chr5.4:78234072-78234091 | MS.gene074486:intron | 40.0% | |
| AGCAAATTCAGGCATTAGAG+CGG | - | chr5.4:78235802-78235821 | MS.gene074486:CDS | 40.0% | |
| AGTAGGAGGAACATTTCAGA+CGG | + | chr5.4:78233710-78233729 | None:intergenic | 40.0% | |
| ATCCACGCTATTAGCATCAA+CGG | + | chr5.4:78233415-78233434 | None:intergenic | 40.0% | |
| ATGCCATCAGATGTTTCTTC+AGG | + | chr5.4:78235543-78235562 | None:intergenic | 40.0% | |
| ATGCTCTGACATAACCTTTC+TGG | + | chr5.4:78235485-78235504 | None:intergenic | 40.0% | |
| ATGGGAGAAGAAACTCTATC+AGG | - | chr5.4:78233497-78233516 | MS.gene074486:intron | 40.0% | |
| ATTCGAGAAGCCAGAATTCT+GGG | - | chr5.4:78235351-78235370 | MS.gene074486:CDS | 40.0% | |
| CGAGGATGAAGTTGTTAAAC+AGG | - | chr5.4:78232887-78232906 | MS.gene074486:CDS | 40.0% | |
| CTCCTCCAAAAACTTCTACT+TGG | - | chr5.4:78232736-78232755 | MS.gene074486:CDS | 40.0% | |
| CTGTGTATCCTTGAATGAGT+GGG | - | chr5.4:78234999-78235018 | MS.gene074486:intron | 40.0% | |
| GAACCTGAAGAAACATCTGA+TGG | - | chr5.4:78235537-78235556 | MS.gene074486:CDS | 40.0% | |
| GAAGATAGTCATGACATCTG+GGG | - | chr5.4:78235824-78235843 | MS.gene074486:CDS | 40.0% | |
| GCTCCACAAGCTATATCTAT+GGG | - | chr5.4:78233479-78233498 | MS.gene074486:intron | 40.0% | |
| GGAAGATAGTCATGACATCT+GGG | - | chr5.4:78235823-78235842 | MS.gene074486:CDS | 40.0% | |
| GGTTTAACTCGAACTGTGAT+TGG | - | chr5.4:78233984-78234003 | MS.gene074486:intron | 40.0% | |
| GTTGCATCCAGAAAGAAAAG+TGG | - | chr5.4:78235378-78235397 | MS.gene074486:CDS | 40.0% | |
| TAAAAAACCTCAGGAAGGAC+AGG | + | chr5.4:78233742-78233761 | None:intergenic | 40.0% | |
| TAATCAGTGGTCTCAAGCTT+TGG | - | chr5.4:78235614-78235633 | MS.gene074486:CDS | 40.0% | |
| TAATCCAACCCACTCATTCA+AGG | + | chr5.4:78235010-78235029 | None:intergenic | 40.0% | |
| TACAGGCAGAGGAAAAAATG+CGG | - | chr5.4:78233892-78233911 | MS.gene074486:intron | 40.0% | |
| TACTTCCAAGATGTTGCATC+TGG | - | chr5.4:78233341-78233360 | MS.gene074486:CDS | 40.0% | |
| TCATAATAGTCACTTCACCC+TGG | + | chr5.4:78234700-78234719 | None:intergenic | 40.0% | |
| TCATGATCATGGTCATCTTG+AGG | - | chr5.4:78232965-78232984 | MS.gene074486:CDS | 40.0% | |
| TCTCCCATAGATATAGCTTG+TGG | + | chr5.4:78233485-78233504 | None:intergenic | 40.0% | |
| TGACAAAAGCAGTAACCTAC+AGG | - | chr5.4:78235890-78235909 | MS.gene074486:CDS | 40.0% | |
| TGCTCTGACATAACCTTTCT+GGG | + | chr5.4:78235484-78235503 | None:intergenic | 40.0% | |
| TTGGGGAGTAGCAAATTTCT+AGG | + | chr5.4:78234952-78234971 | None:intergenic | 40.0% | |
| TTTCAGAAGGCTTCTGATTC+CGG | - | chr5.4:78233152-78233171 | MS.gene074486:CDS | 40.0% | |
| ! | AAGGTTCCTCTTGATGATTG+GGG | + | chr5.4:78234969-78234988 | None:intergenic | 40.0% |
| ! | TATTTATTGGCTACAGGCAG+AGG | - | chr5.4:78233881-78233900 | MS.gene074486:intron | 40.0% |
| ! | TGAATCTTTGAGAGCTTACG+AGG | - | chr5.4:78235956-78235975 | MS.gene074486:CDS | 40.0% |
| !! | CGTCGTTTTCGAAGAAATTG+AGG | + | chr5.4:78232767-78232786 | None:intergenic | 40.0% |
| !! | GTAGAAGTTTTTGGAGGAGA+AGG | + | chr5.4:78232735-78232754 | None:intergenic | 40.0% |
| !! | TCACCAATCCGATTCGATTT+TGG | - | chr5.4:78233560-78233579 | MS.gene074486:intron | 40.0% |
| !! | TCCCAAGTAGAAGTTTTTGG+AGG | + | chr5.4:78232741-78232760 | None:intergenic | 40.0% |
| AAGCTCTTGTTCAAGCTGCT+TGG | + | chr5.4:78235424-78235443 | None:intergenic | 45.0% | |
| ACAGGATAGCTAACAGTAGG+AGG | + | chr5.4:78233724-78233743 | None:intergenic | 45.0% | |
| ACAGGCAGAGGAAAAAATGC+GGG | - | chr5.4:78233893-78233912 | MS.gene074486:intron | 45.0% | |
| AGCAACCAGATGCAACATCT+TGG | + | chr5.4:78233349-78233368 | None:intergenic | 45.0% | |
| AGGACAGGATAGCTAACAGT+AGG | + | chr5.4:78233727-78233746 | None:intergenic | 45.0% | |
| ATAGTCATGACATCTGGGGA+AGG | - | chr5.4:78235828-78235847 | MS.gene074486:CDS | 45.0% | |
| ATCGAAGCTTTCCAACTTCG+AGG | + | chr5.4:78233196-78233215 | None:intergenic | 45.0% | |
| ATGACATCTGGGGAAGGTAA+AGG | - | chr5.4:78235834-78235853 | MS.gene074486:CDS | 45.0% | |
| ATTTCTCTGGCAACCTCAAG+AGG | + | chr5.4:78233122-78233141 | None:intergenic | 45.0% | |
| CCACTCATTCAAGGATACAC+AGG | + | chr5.4:78235001-78235020 | None:intergenic | 45.0% | |
| CCTGTGTATCCTTGAATGAG+TGG | - | chr5.4:78234998-78235017 | MS.gene074486:intron | 45.0% | |
| CGCTCCACAAGCTATATCTA+TGG | - | chr5.4:78233478-78233497 | MS.gene074486:intron | 45.0% | |
| CGGAAGATAGTCATGACATC+TGG | - | chr5.4:78235822-78235841 | MS.gene074486:CDS | 45.0% | |
| GAAGCTGCAGAAGCAAATTC+AGG | - | chr5.4:78235791-78235810 | MS.gene074486:CDS | 45.0% | |
| GATATGCGCGATATGTGAAC+CGG | + | chr5.4:78233174-78233193 | None:intergenic | 45.0% | |
| GGAAGAAGGGATTCCTGATT+TGG | - | chr5.4:78232860-78232879 | MS.gene074486:CDS | 45.0% | |
| GTATCCTTGAATGAGTGGGT+TGG | - | chr5.4:78235003-78235022 | MS.gene074486:intron | 45.0% | |
| TCAGCAGCTGATACAGAACA+AGG | - | chr5.4:78235728-78235747 | MS.gene074486:CDS | 45.0% | |
| TCATCCTCGTCTTCCAAATC+AGG | + | chr5.4:78232876-78232895 | None:intergenic | 45.0% | |
| TCCACGCTATTAGCATCAAC+GGG | + | chr5.4:78233414-78233433 | None:intergenic | 45.0% | |
| TGCAACATCTTGGAAGTAGC+TGG | + | chr5.4:78233339-78233358 | None:intergenic | 45.0% | |
| TGCAACTGAACCCAGAATTC+TGG | + | chr5.4:78235364-78235383 | None:intergenic | 45.0% | |
| TTTCTCTGGCAACCTCAAGA+GGG | + | chr5.4:78233121-78233140 | None:intergenic | 45.0% | |
| ! | CTCGAATGTTTTATGGGGTC+AGG | + | chr5.4:78234553-78234572 | None:intergenic | 45.0% |
| ! | CTTGGTAATCATTGAGGTGG+TGG | - | chr5.4:78234296-78234315 | MS.gene074486:intron | 45.0% |
| ! | GAATTTGCTTCTGCAGCTTC+TGG | + | chr5.4:78235791-78235810 | None:intergenic | 45.0% |
| ! | TGATTCGCATCGACAGAGAA+CGG | + | chr5.4:78233819-78233838 | None:intergenic | 45.0% |
| !! | GAAGTTTTTGGAGGAGAAGG+TGG | + | chr5.4:78232732-78232751 | None:intergenic | 45.0% |
| !! | GATTCCTGATTTGGAAGACG+AGG | - | chr5.4:78232869-78232888 | MS.gene074486:CDS | 45.0% |
| !! | TTGCTTCGCATTGACTACGA+TGG | + | chr5.4:78235332-78235351 | None:intergenic | 45.0% |
| !!! | GCAGCGTATTTTTGAGGCAA+TGG | - | chr5.4:78235920-78235939 | MS.gene074486:CDS | 45.0% |
| !!! | TATAAAATATTTTTTTTTTC+AGG | - | chr5.4:78235274-78235293 | MS.gene074486:CDS | 5.0% |
| AAGGATGTGAGGGAGGAAGA+AGG | - | chr5.4:78232846-78232865 | MS.gene074486:CDS | 50.0% | |
| ACATCCTTTGAATCCCGGCT+AGG | + | chr5.4:78232834-78232853 | None:intergenic | 50.0% | |
| ACCAATCCTACCAGGGGAAA+AGG | + | chr5.4:78235571-78235590 | None:intergenic | 50.0% | |
| ACCCGTTGATGCTAATAGCG+TGG | - | chr5.4:78233410-78233429 | MS.gene074486:CDS | 50.0% | |
| ACTACGATGGCACTCAAGCA+TGG | + | chr5.4:78235319-78235338 | None:intergenic | 50.0% | |
| AGCTGAAGGGATTGATCCAG+GGG | - | chr5.4:78234099-78234118 | MS.gene074486:intron | 50.0% | |
| AGGATGTGAGGGAGGAAGAA+GGG | - | chr5.4:78232847-78232866 | MS.gene074486:CDS | 50.0% | |
| ATCGCGCATATCCTCGAAGT+TGG | - | chr5.4:78233182-78233201 | MS.gene074486:CDS | 50.0% | |
| CAATCCTACCAGGGGAAAAG+GGG | + | chr5.4:78235569-78235588 | None:intergenic | 50.0% | |
| CAGCTGAAGGGATTGATCCA+GGG | - | chr5.4:78234098-78234117 | MS.gene074486:intron | 50.0% | |
| CCAATCCTACCAGGGGAAAA+GGG | + | chr5.4:78235570-78235589 | None:intergenic | 50.0% | |
| CCCTCACATCCTTTGAATCC+CGG | + | chr5.4:78232839-78232858 | None:intergenic | 50.0% | |
| CCGGGATTCAAAGGATGTGA+GGG | - | chr5.4:78232836-78232855 | MS.gene074486:CDS | 50.0% | |
| CTTACGAGGAGCTGCTACAA+CGG | - | chr5.4:78235970-78235989 | MS.gene074486:CDS | 50.0% | |
| GAAGACACCACAGACGATGA+AGG | + | chr5.4:78233372-78233391 | None:intergenic | 50.0% | |
| GATGACGCAATACACACCCA+CGG | - | chr5.4:78232803-78232822 | MS.gene074486:CDS | 50.0% | |
| GCTACTCCCCAATCATCAAG+AGG | - | chr5.4:78234960-78234979 | MS.gene074486:intron | 50.0% | |
| GGATTCAAAGGATGTGAGGG+AGG | - | chr5.4:78232839-78232858 | MS.gene074486:CDS | 50.0% | |
| GGTGTGTATTGCGTCATCTG+TGG | + | chr5.4:78232801-78232820 | None:intergenic | 50.0% | |
| TACACCTAGCCGGGATTCAA+AGG | - | chr5.4:78232827-78232846 | MS.gene074486:CDS | 50.0% | |
| TAGCTATCCTGTCCTTCCTG+AGG | - | chr5.4:78233732-78233751 | MS.gene074486:intron | 50.0% | |
| TCAAGAGGGTTCCTGTTACC+AGG | + | chr5.4:78233107-78233126 | None:intergenic | 50.0% | |
| TGGATCAATCCCTTCAGCTG+CGG | + | chr5.4:78234098-78234117 | None:intergenic | 50.0% | |
| TGGTAACAGGAACCCTCTTG+AGG | - | chr5.4:78233106-78233125 | MS.gene074486:CDS | 50.0% | |
| TTGACGTTGAACTCACGACC+AGG | - | chr5.4:78233436-78233455 | MS.gene074486:CDS | 50.0% | |
| ! | GACTTTCCAATTCGCTGGCT+GGG | - | chr5.4:78235452-78235471 | MS.gene074486:intron | 50.0% |
| ! | TACGCTGCAAACTAGCCTGT+AGG | + | chr5.4:78235908-78235927 | None:intergenic | 50.0% |
| !! | CTAAAAGTGGGAAGTACCCC+AGG | + | chr5.4:78234495-78234514 | None:intergenic | 50.0% |
| AGAGCTAAGATTGCGCGACC+TGG | + | chr5.4:78233457-78233476 | None:intergenic | 55.0% | |
| CACTTACCCAGCCAGCGAAT+TGG | + | chr5.4:78235461-78235480 | None:intergenic | 55.0% | |
| CAGGCGCATAGCTCAATTGC+TGG | + | chr5.4:78234534-78234553 | None:intergenic | 55.0% | |
| CGCGGAATTGGGCTTAGCTT+TGG | + | chr5.4:78233078-78233097 | None:intergenic | 55.0% | |
| CTAAGCCCAATTCCGCGTTC+CGG | - | chr5.4:78233081-78233100 | MS.gene074486:CDS | 55.0% | |
| GCAGCTGAAGGGATTGATCC+AGG | - | chr5.4:78234097-78234116 | MS.gene074486:intron | 55.0% | |
| GCCGGGATTCAAAGGATGTG+AGG | - | chr5.4:78232835-78232854 | MS.gene074486:CDS | 55.0% | |
| GGACTTTCCAATTCGCTGGC+TGG | - | chr5.4:78235451-78235470 | MS.gene074486:intron | 55.0% | |
| GGTTGCTCCTTCATCGTCTG+TGG | - | chr5.4:78233362-78233381 | MS.gene074486:CDS | 55.0% | |
| ! | CCCTTTTCCCCTGGTAGGAT+TGG | - | chr5.4:78235567-78235586 | MS.gene074486:CDS | 55.0% |
| ! | TAGTCCCCTTTTCCCCTGGT+AGG | - | chr5.4:78235562-78235581 | MS.gene074486:CDS | 55.0% |
| AGAACTGTGGCCGCAGCTGA+AGG | - | chr5.4:78234085-78234104 | MS.gene074486:intron | 60.0% | |
| GAACTGTGGCCGCAGCTGAA+GGG | - | chr5.4:78234086-78234105 | MS.gene074486:intron | 60.0% | |
| GAGGGTTCCTGTTACCAGGC+CGG | + | chr5.4:78233103-78233122 | None:intergenic | 60.0% | |
| GGCTGGGTAAGTGCCCAGAA+AGG | - | chr5.4:78235468-78235487 | MS.gene074486:intron | 60.0% | |
| ! | GGCATAGTCCCCTTTTCCCC+TGG | - | chr5.4:78235558-78235577 | MS.gene074486:CDS | 60.0% |
| ! | GTGGGGCACCAATCCTACCA+GGG | + | chr5.4:78235578-78235597 | None:intergenic | 60.0% |
| ! | TGGGGCACCAATCCTACCAG+GGG | + | chr5.4:78235577-78235596 | None:intergenic | 60.0% |
| ! | TGTGGGGCACCAATCCTACC+AGG | + | chr5.4:78235579-78235598 | None:intergenic | 60.0% |
| ACCAGGCCGGAACGCGGAAT+TGG | + | chr5.4:78233090-78233109 | None:intergenic | 65.0% | |
| ACCCACGGCTACACCTAGCC+GGG | - | chr5.4:78232818-78232837 | MS.gene074486:CDS | 65.0% | |
| ATCCCGGCTAGGTGTAGCCG+TGG | + | chr5.4:78232823-78232842 | None:intergenic | 65.0% | |
| CACCCACGGCTACACCTAGC+CGG | - | chr5.4:78232817-78232836 | MS.gene074486:CDS | 65.0% | |
| CCAGGCCGGAACGCGGAATT+GGG | + | chr5.4:78233089-78233108 | None:intergenic | 65.0% | |
| CCTGTTACCAGGCCGGAACG+CGG | + | chr5.4:78233096-78233115 | None:intergenic | 65.0% | |
| TCCCGGCTAGGTGTAGCCGT+GGG | + | chr5.4:78232822-78232841 | None:intergenic | 65.0% | |
| CCCAATTCCGCGTTCCGGCC+TGG | - | chr5.4:78233086-78233105 | MS.gene074486:CDS | 70.0% | |
| CCGCGTTCCGGCCTGGTAAC+AGG | - | chr5.4:78233093-78233112 | MS.gene074486:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 78232727 | 78236028 | 78232727 | ID=MS.gene074486 |
| chr5.4 | mRNA | 78232727 | 78236028 | 78232727 | ID=MS.gene074486.t1;Parent=MS.gene074486 |
| chr5.4 | exon | 78235528 | 78236028 | 78235528 | ID=MS.gene074486.t1.exon1;Parent=MS.gene074486.t1 |
| chr5.4 | CDS | 78235528 | 78236028 | 78235528 | ID=cds.MS.gene074486.t1;Parent=MS.gene074486.t1 |
| chr5.4 | exon | 78235228 | 78235415 | 78235228 | ID=MS.gene074486.t1.exon2;Parent=MS.gene074486.t1 |
| chr5.4 | CDS | 78235228 | 78235415 | 78235228 | ID=cds.MS.gene074486.t1;Parent=MS.gene074486.t1 |
| chr5.4 | exon | 78234635 | 78234858 | 78234635 | ID=MS.gene074486.t1.exon3;Parent=MS.gene074486.t1 |
| chr5.4 | CDS | 78234635 | 78234858 | 78234635 | ID=cds.MS.gene074486.t1;Parent=MS.gene074486.t1 |
| chr5.4 | exon | 78232727 | 78233459 | 78232727 | ID=MS.gene074486.t1.exon4;Parent=MS.gene074486.t1 |
| chr5.4 | CDS | 78232727 | 78233459 | 78232727 | ID=cds.MS.gene074486.t1;Parent=MS.gene074486.t1 |
| Gene Sequence |
| Protein sequence |
