Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074491.t1 | XP_003618105.1 | 89.3 | 197 | 9 | 1 | 1 | 185 | 27 | 223 | 4.00E-92 | 347.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074491.t1 | G7KFE7 | 89.3 | 197 | 9 | 1 | 1 | 185 | 27 | 223 | 2.9e-92 | 347.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene074491 | -0.801516 | 8.68E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074491.t1 | MTR_5g099030 | 89.340 | 197 | 9 | 1 | 1 | 185 | 27 | 223 | 6.69e-128 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074491.t1 | AT4G38370 | 60.406 | 197 | 63 | 2 | 1 | 185 | 32 | 225 | 8.04e-82 | 242 |
Find 54 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTGGGTTGTTCTTGAAAA+AGG | 0.215376 | 5.1:-80718354 | None:intergenic |
| ATCGACAGTATGATCAGATT+TGG | 0.254816 | 5.1:+80719051 | MS.gene074491:intron |
| AAATTCAATTCACAGGAAAA+TGG | 0.281279 | 5.1:+80718118 | MS.gene074491:intron |
| TTAACACTTTCCCCTCCTTC+TGG | 0.283802 | 5.1:-80719104 | None:intergenic |
| TTCAATATTAGCGGCGGTTC+AGG | 0.288734 | 5.1:+80719581 | MS.gene074491:CDS |
| TCTGGGGCCAATTGGAATTC+AGG | 0.308129 | 5.1:-80718148 | None:intergenic |
| CGCCAGTATGCTCTGAATAC+TGG | 0.357359 | 5.1:+80719627 | MS.gene074491:CDS |
| TGTGCTTGATTAACGCCGTC+TGG | 0.365035 | 5.1:-80718166 | None:intergenic |
| TCGACAGTATGATCAGATTT+GGG | 0.380484 | 5.1:+80719052 | MS.gene074491:intron |
| TCAGAGCATACTGGCGGTGC+TGG | 0.382439 | 5.1:-80719620 | None:intergenic |
| TTCAAATTCTGATTCGAGAA+TGG | 0.412207 | 5.1:-80719159 | None:intergenic |
| TAACGCCGTCTGGGGCCAAT+TGG | 0.412841 | 5.1:-80718156 | None:intergenic |
| ATCATGCAGATGTGCGATTC+TGG | 0.416868 | 5.1:+80719470 | MS.gene074491:intron |
| GAATTGTTTGCAAGATCTGC+AGG | 0.433814 | 5.1:-80719512 | None:intergenic |
| GATGAGAAAGATCCTCTTGT+TGG | 0.442170 | 5.1:+80719080 | MS.gene074491:CDS |
| AGTAGCGCTCACGAAGATCT+TGG | 0.456148 | 5.1:-80718437 | None:intergenic |
| GATCTTCGTGAGCGCTACTT+TGG | 0.462299 | 5.1:+80718441 | MS.gene074491:CDS |
| GTGCTTGATTAACGCCGTCT+GGG | 0.468316 | 5.1:-80718165 | None:intergenic |
| CGATTCTGGTTGTCAGCCAT+GGG | 0.469114 | 5.1:+80719484 | MS.gene074491:CDS |
| CTCCAGTATTCAGAGCATAC+TGG | 0.471623 | 5.1:-80719629 | None:intergenic |
| AGAAGGAGGGGAAAGTGTTA+AGG | 0.483555 | 5.1:+80719106 | MS.gene074491:CDS |
| TGGCGGTGCTGGGACAAGAT+TGG | 0.489709 | 5.1:-80719609 | None:intergenic |
| GCATGCTGCTAAGAAACATA+AGG | 0.497206 | 5.1:+80719536 | MS.gene074491:CDS |
| TATTCTCCCTGAATTCCAAT+TGG | 0.506183 | 5.1:+80718141 | MS.gene074491:CDS |
| GATCCTCTTGTTGGGCCAGA+AGG | 0.507778 | 5.1:+80719089 | MS.gene074491:CDS |
| ATGAGAAAGATCCTCTTGTT+GGG | 0.508854 | 5.1:+80719081 | MS.gene074491:CDS |
| GCGATTCTGGTTGTCAGCCA+TGG | 0.511993 | 5.1:+80719483 | MS.gene074491:CDS |
| CTGGGGCCAATTGGAATTCA+GGG | 0.512536 | 5.1:-80718147 | None:intergenic |
| TTCTCGAATCAGAATTTGAA+GGG | 0.530175 | 5.1:+80719162 | MS.gene074491:CDS |
| CAGAGCATACTGGCGGTGCT+GGG | 0.532312 | 5.1:-80719619 | None:intergenic |
| TGCAACAACATTAGCAGTGT+GGG | 0.533819 | 5.1:-80718370 | None:intergenic |
| TGACTTAGCTTCAATATTAG+CGG | 0.535064 | 5.1:+80719572 | MS.gene074491:CDS |
| CTCTTGTTGGGCCAGAAGGA+GGG | 0.539146 | 5.1:+80719093 | MS.gene074491:CDS |
| GTTAATCAAGCACAACTCGC+TGG | 0.541912 | 5.1:+80718175 | MS.gene074491:CDS |
| CTCTGAATACTGGAGAGCTC+AGG | 0.547008 | 5.1:+80719637 | MS.gene074491:CDS |
| AATATTAGCGGCGGTTCAGG+TGG | 0.558199 | 5.1:+80719584 | MS.gene074491:CDS |
| CCTCCTTCTGGCCCAACAAG+AGG | 0.558622 | 5.1:-80719092 | None:intergenic |
| TCTTGTTGGGCCAGAAGGAG+GGG | 0.564650 | 5.1:+80719094 | MS.gene074491:CDS |
| CCTCTTGTTGGGCCAGAAGG+AGG | 0.569026 | 5.1:+80719092 | MS.gene074491:CDS |
| TGAAGCTAAGTCATCAGAAG+TGG | 0.576783 | 5.1:-80719562 | None:intergenic |
| TGCTTGATTAACGCCGTCTG+GGG | 0.585399 | 5.1:-80718164 | None:intergenic |
| ATTCTCGAATCAGAATTTGA+AGG | 0.587018 | 5.1:+80719161 | MS.gene074491:CDS |
| GAATTCCAATTGGCCCCAGA+CGG | 0.595083 | 5.1:+80718151 | MS.gene074491:CDS |
| ATCATGAGATAAAAGCTCAA+AGG | 0.601806 | 5.1:-80718469 | None:intergenic |
| AATTGTTTGCAAGATCTGCA+GGG | 0.616735 | 5.1:-80719511 | None:intergenic |
| CAAATGCGCACATTAGCAAG+TGG | 0.629630 | 5.1:-80718324 | None:intergenic |
| TGAGATAAAAGCTCAAAGGA+AGG | 0.631369 | 5.1:-80718465 | None:intergenic |
| ATTGTTTGCAAGATCTGCAG+GGG | 0.632923 | 5.1:-80719510 | None:intergenic |
| CTTAGCTTCAATATTAGCGG+CGG | 0.633224 | 5.1:+80719575 | MS.gene074491:CDS |
| GAAGCTAAGTCATCAGAAGT+GGG | 0.635529 | 5.1:-80719561 | None:intergenic |
| AGATCTGCAGGGGATCCCCA+TGG | 0.642367 | 5.1:-80719500 | None:intergenic |
| TTGCAACAACATTAGCAGTG+TGG | 0.655752 | 5.1:-80718371 | None:intergenic |
| CAGTATTCAGAGCATACTGG+CGG | 0.703219 | 5.1:-80719626 | None:intergenic |
| GATTCTGGTTGTCAGCCATG+GGG | 0.723007 | 5.1:+80719485 | MS.gene074491:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGCTATTTATTTATTTAT+TGG | + | chr5.1:80718276-80718295 | MS.gene074491:intron | 10.0% |
| !! | ATTGATATTACAGATAATTA+TGG | - | chr5.1:80718696-80718715 | None:intergenic | 15.0% |
| !! | GAATTTCAAATGATATTTAA+AGG | - | chr5.1:80719200-80719219 | None:intergenic | 15.0% |
| !! | TATTTATTTATTTATTGGAC+AGG | + | chr5.1:80718281-80718300 | MS.gene074491:intron | 15.0% |
| !! | TCATATTCATAAATTCTAAT+TGG | + | chr5.1:80718543-80718562 | MS.gene074491:intron | 15.0% |
| !! | TTGATATTTATAACAATACT+CGG | + | chr5.1:80718750-80718769 | MS.gene074491:intron | 15.0% |
| !!! | AATATCAACATTTTATATCA+CGG | - | chr5.1:80718738-80718757 | None:intergenic | 15.0% |
| !!! | AGATAGTGAATATTTTATTT+TGG | + | chr5.1:80719320-80719339 | MS.gene074491:intron | 15.0% |
| !!! | TATATCTTTAAGTATGTTTT+TGG | + | chr5.1:80719401-80719420 | MS.gene074491:intron | 15.0% |
| !! | ATAAATTCTAATTGGTATTG+AGG | + | chr5.1:80718551-80718570 | MS.gene074491:intron | 20.0% |
| !! | TTTCAGCATACTTATATAAA+GGG | - | chr5.1:80718989-80719008 | None:intergenic | 20.0% |
| ! | AAATTCAATTCACAGGAAAA+TGG | + | chr5.1:80718118-80718137 | MS.gene074491:intron | 25.0% |
| ! | ATGATATTTAAAGGCAGAAA+TGG | - | chr5.1:80719191-80719210 | None:intergenic | 25.0% |
| ! | CAAATTCAAATTCAATTCAC+AGG | + | chr5.1:80718111-80718130 | MS.gene074491:intron | 25.0% |
| ! | GTTTCAGCATACTTATATAA+AGG | - | chr5.1:80718990-80719009 | None:intergenic | 25.0% |
| ! | TGATATTTAAAGGCAGAAAT+GGG | - | chr5.1:80719190-80719209 | None:intergenic | 25.0% |
| ! | TTCAGCATACTTATATAAAG+GGG | - | chr5.1:80718988-80719007 | None:intergenic | 25.0% |
| !! | AATTGGTATTGAGGTATAAT+TGG | + | chr5.1:80718560-80718579 | MS.gene074491:intron | 25.0% |
| !! | TTTTATCTCATGATATGGTA+TGG | + | chr5.1:80718478-80718497 | MS.gene074491:intron | 25.0% |
| AAAATGAGTTTCGCAAACTA+CGG | - | chr5.1:80719015-80719034 | None:intergenic | 30.0% | |
| ACTACTTACATATTCTGTAG+CGG | + | chr5.1:80718798-80718817 | MS.gene074491:intron | 30.0% | |
| ATCATGAGATAAAAGCTCAA+AGG | - | chr5.1:80718472-80718491 | None:intergenic | 30.0% | |
| ATTCTCGAATCAGAATTTGA+AGG | + | chr5.1:80719161-80719180 | MS.gene074491:CDS | 30.0% | |
| CAGATAATTATGGTCAAAAG+TGG | - | chr5.1:80718686-80718705 | None:intergenic | 30.0% | |
| CATGAAAAACTTAAACGATG+TGG | - | chr5.1:80718642-80718661 | None:intergenic | 30.0% | |
| TGACTTAGCTTCAATATTAG+CGG | + | chr5.1:80719572-80719591 | MS.gene074491:CDS | 30.0% | |
| TTCTCGAATCAGAATTTGAA+GGG | + | chr5.1:80719162-80719181 | MS.gene074491:CDS | 30.0% | |
| ! | GCATTGAATATTCCTTTTCA+TGG | + | chr5.1:80718396-80718415 | MS.gene074491:intron | 30.0% |
| ! | TGAGCTTTTATCTCATGATA+TGG | + | chr5.1:80718473-80718492 | MS.gene074491:CDS | 30.0% |
| ! | TTCAAATTCTGATTCGAGAA+TGG | - | chr5.1:80719162-80719181 | None:intergenic | 30.0% |
| AATTGTTTGCAAGATCTGCA+GGG | - | chr5.1:80719514-80719533 | None:intergenic | 35.0% | |
| ATAATTGGATAGTTAGCAGC+AGG | + | chr5.1:80718575-80718594 | MS.gene074491:intron | 35.0% | |
| ATCGACAGTATGATCAGATT+TGG | + | chr5.1:80719051-80719070 | MS.gene074491:intron | 35.0% | |
| ATGAGAAAGATCCTCTTGTT+GGG | + | chr5.1:80719081-80719100 | MS.gene074491:CDS | 35.0% | |
| ATGTAAGTAGTGGCACTAAA+CGG | - | chr5.1:80718789-80718808 | None:intergenic | 35.0% | |
| CAGTAGACTTGCAAAAACAA+TGG | + | chr5.1:80719136-80719155 | MS.gene074491:CDS | 35.0% | |
| GCTACAGAATATGTAAGTAG+TGG | - | chr5.1:80718799-80718818 | None:intergenic | 35.0% | |
| TATTCTCCCTGAATTCCAAT+TGG | + | chr5.1:80718141-80718160 | MS.gene074491:CDS | 35.0% | |
| TCGACAGTATGATCAGATTT+GGG | + | chr5.1:80719052-80719071 | MS.gene074491:intron | 35.0% | |
| TGAGATAAAAGCTCAAAGGA+AGG | - | chr5.1:80718468-80718487 | None:intergenic | 35.0% | |
| TGTATGTCTGTTTGCATGTT+AGG | - | chr5.1:80718238-80718257 | None:intergenic | 35.0% | |
| ! | ACATTTTATATCACGGTCAC+AGG | - | chr5.1:80718731-80718750 | None:intergenic | 35.0% |
| ! | CGCTGGATTTTCATTTCAAA+AGG | + | chr5.1:80718192-80718211 | MS.gene074491:CDS | 35.0% |
| ! | TGTGGGTTGTTCTTGAAAAA+GGG | - | chr5.1:80718356-80718375 | None:intergenic | 35.0% |
| !!! | CATTGTTTTTGCAAGTCTAC+TGG | - | chr5.1:80719138-80719157 | None:intergenic | 35.0% |
| !!! | TCTTTTTTAGCACAAGCTTG+TGG | + | chr5.1:80719234-80719253 | MS.gene074491:intron | 35.0% |
| AAACTCATGACTGAGTGAGT+AGG | - | chr5.1:80718864-80718883 | None:intergenic | 40.0% | |
| ATTGTTTGCAAGATCTGCAG+GGG | - | chr5.1:80719513-80719532 | None:intergenic | 40.0% | |
| CAACTTCAACTGTTGCAATG+AGG | - | chr5.1:80718831-80718850 | None:intergenic | 40.0% | |
| CTTACATATTCTGTAGCGGT+AGG | + | chr5.1:80718802-80718821 | MS.gene074491:intron | 40.0% | |
| CTTAGCTTCAATATTAGCGG+CGG | + | chr5.1:80719575-80719594 | MS.gene074491:CDS | 40.0% | |
| CTTGGATGACCTTACAATGA+GGG | - | chr5.1:80718422-80718441 | None:intergenic | 40.0% | |
| GAAGCTAAGTCATCAGAAGT+GGG | - | chr5.1:80719564-80719583 | None:intergenic | 40.0% | |
| GAATTGTTTGCAAGATCTGC+AGG | - | chr5.1:80719515-80719534 | None:intergenic | 40.0% | |
| GATGAGAAAGATCCTCTTGT+TGG | + | chr5.1:80719080-80719099 | MS.gene074491:CDS | 40.0% | |
| GCATGCTGCTAAGAAACATA+AGG | + | chr5.1:80719536-80719555 | MS.gene074491:CDS | 40.0% | |
| GCTTCAGTAAACCCTTTCTT+GGG | + | chr5.1:80718925-80718944 | MS.gene074491:intron | 40.0% | |
| GTGTTAGAAAGCTCTTGTCA+CGG | - | chr5.1:80718959-80718978 | None:intergenic | 40.0% | |
| TCTTGGATGACCTTACAATG+AGG | - | chr5.1:80718423-80718442 | None:intergenic | 40.0% | |
| TGAAGCTAAGTCATCAGAAG+TGG | - | chr5.1:80719565-80719584 | None:intergenic | 40.0% | |
| TGCAACAACATTAGCAGTGT+GGG | - | chr5.1:80718373-80718392 | None:intergenic | 40.0% | |
| TGCTTCAGTAAACCCTTTCT+TGG | + | chr5.1:80718924-80718943 | MS.gene074491:intron | 40.0% | |
| TGTAAGTAGTGGCACTAAAC+GGG | - | chr5.1:80718788-80718807 | None:intergenic | 40.0% | |
| TTACAATGAGGGCCATGAAA+AGG | - | chr5.1:80718411-80718430 | None:intergenic | 40.0% | |
| TTGCAACAACATTAGCAGTG+TGG | - | chr5.1:80718374-80718393 | None:intergenic | 40.0% | |
| ! | GTGGGTTGTTCTTGAAAAAG+GGG | - | chr5.1:80718355-80718374 | None:intergenic | 40.0% |
| ! | GTGTGGGTTGTTCTTGAAAA+AGG | - | chr5.1:80718357-80718376 | None:intergenic | 40.0% |
| ! | TGCACAGGGTTTTTCATCTA+TGG | + | chr5.1:80719355-80719374 | MS.gene074491:intron | 40.0% |
| ! | TTTTCATGGCCCTCATTGTA+AGG | + | chr5.1:80718410-80718429 | MS.gene074491:intron | 40.0% |
| AATCGCACATCTGCATGATG+TGG | - | chr5.1:80719469-80719488 | None:intergenic | 45.0% | |
| ATCATGCAGATGTGCGATTC+TGG | + | chr5.1:80719470-80719489 | MS.gene074491:intron | 45.0% | |
| ATGAGTTTCGCAAACTACGG+TGG | - | chr5.1:80719012-80719031 | None:intergenic | 45.0% | |
| CAAATGCGCACATTAGCAAG+TGG | - | chr5.1:80718327-80718346 | None:intergenic | 45.0% | |
| CACATCTGCATGATGTGGAA+TGG | - | chr5.1:80719464-80719483 | None:intergenic | 45.0% | |
| CAGTATTCAGAGCATACTGG+CGG | - | chr5.1:80719629-80719648 | None:intergenic | 45.0% | |
| CTCCAGTATTCAGAGCATAC+TGG | - | chr5.1:80719632-80719651 | None:intergenic | 45.0% | |
| GTCAGCTTGAACTAACTGCA+GGG | - | chr5.1:80719260-80719279 | None:intergenic | 45.0% | |
| GTTAATCAAGCACAACTCGC+TGG | + | chr5.1:80718175-80718194 | MS.gene074491:CDS | 45.0% | |
| TGTCAGCTTGAACTAACTGC+AGG | - | chr5.1:80719261-80719280 | None:intergenic | 45.0% | |
| TTAACACTTTCCCCTCCTTC+TGG | - | chr5.1:80719107-80719126 | None:intergenic | 45.0% | |
| TTAGAAAGCTCTTGTCACGG+CGG | - | chr5.1:80718956-80718975 | None:intergenic | 45.0% | |
| TTCAATATTAGCGGCGGTTC+AGG | + | chr5.1:80719581-80719600 | MS.gene074491:CDS | 45.0% | |
| !! | AGAAGGAGGGGAAAGTGTTA+AGG | + | chr5.1:80719106-80719125 | MS.gene074491:CDS | 45.0% |
| AATATTAGCGGCGGTTCAGG+TGG | + | chr5.1:80719584-80719603 | MS.gene074491:CDS | 50.0% | |
| AGTAGCGCTCACGAAGATCT+TGG | - | chr5.1:80718440-80718459 | None:intergenic | 50.0% | |
| CTCTGAATACTGGAGAGCTC+AGG | + | chr5.1:80719637-80719656 | MS.gene074491:CDS | 50.0% | |
| CTGGGGCCAATTGGAATTCA+GGG | - | chr5.1:80718150-80718169 | None:intergenic | 50.0% | |
| GAATTCCAATTGGCCCCAGA+CGG | + | chr5.1:80718151-80718170 | MS.gene074491:CDS | 50.0% | |
| GATCTTCGTGAGCGCTACTT+TGG | + | chr5.1:80718441-80718460 | MS.gene074491:CDS | 50.0% | |
| GGCTTGTGATCTAGTGCACA+GGG | + | chr5.1:80719341-80719360 | MS.gene074491:intron | 50.0% | |
| GTGCTTGATTAACGCCGTCT+GGG | - | chr5.1:80718168-80718187 | None:intergenic | 50.0% | |
| TGCTTGATTAACGCCGTCTG+GGG | - | chr5.1:80718167-80718186 | None:intergenic | 50.0% | |
| TGTGCTTGATTAACGCCGTC+TGG | - | chr5.1:80718169-80718188 | None:intergenic | 50.0% | |
| ! | CGATTCTGGTTGTCAGCCAT+GGG | + | chr5.1:80719484-80719503 | MS.gene074491:CDS | 50.0% |
| ! | CGCCAGTATGCTCTGAATAC+TGG | + | chr5.1:80719627-80719646 | MS.gene074491:CDS | 50.0% |
| ! | GATTCTGGTTGTCAGCCATG+GGG | + | chr5.1:80719485-80719504 | MS.gene074491:CDS | 50.0% |
| ! | TCTGGGGCCAATTGGAATTC+AGG | - | chr5.1:80718151-80718170 | None:intergenic | 50.0% |
| ! | TGGCTTGTGATCTAGTGCAC+AGG | + | chr5.1:80719340-80719359 | MS.gene074491:intron | 50.0% |
| CTCTTGTTGGGCCAGAAGGA+GGG | + | chr5.1:80719093-80719112 | MS.gene074491:CDS | 55.0% | |
| GATCCTCTTGTTGGGCCAGA+AGG | + | chr5.1:80719089-80719108 | MS.gene074491:CDS | 55.0% | |
| TCTTGTTGGGCCAGAAGGAG+GGG | + | chr5.1:80719094-80719113 | MS.gene074491:CDS | 55.0% | |
| ! | GCGATTCTGGTTGTCAGCCA+TGG | + | chr5.1:80719483-80719502 | MS.gene074491:CDS | 55.0% |
| AAAGCTCTTGTCACGGCGGC+AGG | - | chr5.1:80718952-80718971 | None:intergenic | 60.0% | |
| AGATCTGCAGGGGATCCCCA+TGG | - | chr5.1:80719503-80719522 | None:intergenic | 60.0% | |
| CAGAGCATACTGGCGGTGCT+GGG | - | chr5.1:80719622-80719641 | None:intergenic | 60.0% | |
| CCTCCTTCTGGCCCAACAAG+AGG | - | chr5.1:80719095-80719114 | None:intergenic | 60.0% | |
| CCTCTTGTTGGGCCAGAAGG+AGG | + | chr5.1:80719092-80719111 | MS.gene074491:CDS | 60.0% | |
| TCAGAGCATACTGGCGGTGC+TGG | - | chr5.1:80719623-80719642 | None:intergenic | 60.0% | |
| ! | TAACGCCGTCTGGGGCCAAT+TGG | - | chr5.1:80718159-80718178 | None:intergenic | 60.0% |
| ! | TGGCGGTGCTGGGACAAGAT+TGG | - | chr5.1:80719612-80719631 | None:intergenic | 60.0% |
| ACGGCGGCAGGTCCCAAGAA+AGG | - | chr5.1:80718940-80718959 | None:intergenic | 65.0% | |
| CGGCGGCAGGTCCCAAGAAA+GGG | - | chr5.1:80718939-80718958 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 80718044 | 80719671 | 80718044 | ID=MS.gene074491 |
| chr5.1 | mRNA | 80718044 | 80719671 | 80718044 | ID=MS.gene074491.t1;Parent=MS.gene074491 |
| chr5.1 | exon | 80718044 | 80718046 | 80718044 | ID=MS.gene074491.t1.exon1;Parent=MS.gene074491.t1 |
| chr5.1 | CDS | 80718044 | 80718046 | 80718044 | ID=cds.MS.gene074491.t1;Parent=MS.gene074491.t1 |
| chr5.1 | exon | 80718133 | 80718213 | 80718133 | ID=MS.gene074491.t1.exon2;Parent=MS.gene074491.t1 |
| chr5.1 | CDS | 80718133 | 80718213 | 80718133 | ID=cds.MS.gene074491.t1;Parent=MS.gene074491.t1 |
| chr5.1 | exon | 80718303 | 80718395 | 80718303 | ID=MS.gene074491.t1.exon3;Parent=MS.gene074491.t1 |
| chr5.1 | CDS | 80718303 | 80718395 | 80718303 | ID=cds.MS.gene074491.t1;Parent=MS.gene074491.t1 |
| chr5.1 | exon | 80718432 | 80718494 | 80718432 | ID=MS.gene074491.t1.exon4;Parent=MS.gene074491.t1 |
| chr5.1 | CDS | 80718432 | 80718494 | 80718432 | ID=cds.MS.gene074491.t1;Parent=MS.gene074491.t1 |
| chr5.1 | exon | 80719059 | 80719183 | 80719059 | ID=MS.gene074491.t1.exon5;Parent=MS.gene074491.t1 |
| chr5.1 | CDS | 80719059 | 80719183 | 80719059 | ID=cds.MS.gene074491.t1;Parent=MS.gene074491.t1 |
| chr5.1 | exon | 80719479 | 80719671 | 80719479 | ID=MS.gene074491.t1.exon6;Parent=MS.gene074491.t1 |
| chr5.1 | CDS | 80719479 | 80719671 | 80719479 | ID=cds.MS.gene074491.t1;Parent=MS.gene074491.t1 |
| Gene Sequence |
| Protein sequence |
