Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074589.t1 | XP_003627371.1 | 91.5 | 1287 | 88 | 8 | 1 | 1280 | 1 | 1273 | 0.00E+00 | 1981.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074589.t1 | O80386 | 35.2 | 216 | 123 | 4 | 5 | 205 | 5 | 218 | 3.0e-22 | 109.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074589.t1 | G7L8C6 | 91.5 | 1287 | 88 | 8 | 1 | 1280 | 1 | 1273 | 0.0e+00 | 1981.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049418 | MS.gene074589 | 0.809959 | 1.46E-50 | -1.69E-46 |
MS.gene049989 | MS.gene074589 | 0.801131 | 1.04E-48 | -1.69E-46 |
MS.gene051067 | MS.gene074589 | 0.937935 | 1.54E-98 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074589.t1 | MTR_8g022280 | 92.852 | 1287 | 71 | 9 | 1 | 1280 | 1 | 1273 | 0.0 | 2333 |
MS.gene074589.t1 | MTR_2g012990 | 34.234 | 222 | 125 | 4 | 1 | 203 | 1 | 220 | 3.92e-32 | 136 |
MS.gene074589.t1 | MTR_2g079850 | 33.784 | 222 | 125 | 4 | 1 | 214 | 1 | 208 | 1.38e-30 | 131 |
MS.gene074589.t1 | MTR_1g075740 | 35.443 | 237 | 120 | 5 | 1 | 205 | 1 | 236 | 3.84e-30 | 130 |
MS.gene074589.t1 | MTR_1g041465 | 31.687 | 243 | 127 | 3 | 1 | 205 | 1 | 242 | 3.92e-28 | 124 |
MS.gene074589.t1 | MTR_3g093470 | 28.934 | 197 | 130 | 2 | 1 | 196 | 5 | 192 | 8.05e-20 | 96.7 |
MS.gene074589.t1 | MTR_3g093470 | 24.776 | 557 | 329 | 26 | 715 | 1238 | 503 | 1002 | 6.40e-11 | 67.8 |
MS.gene074589.t1 | MTR_3g093470 | 28.934 | 197 | 130 | 2 | 1 | 196 | 5 | 192 | 9.39e-20 | 96.3 |
MS.gene074589.t1 | MTR_3g093470 | 24.776 | 557 | 329 | 26 | 715 | 1238 | 503 | 1002 | 5.80e-11 | 67.8 |
MS.gene074589.t1 | MTR_3g093470 | 24.776 | 557 | 329 | 26 | 715 | 1238 | 362 | 861 | 5.19e-11 | 67.8 |
MS.gene074589.t1 | MTR_3g093470 | 24.776 | 557 | 329 | 26 | 715 | 1238 | 458 | 957 | 5.69e-11 | 67.8 |
MS.gene074589.t1 | MTR_3g093470 | 24.776 | 557 | 329 | 26 | 715 | 1238 | 362 | 861 | 6.05e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074589.t1 | AT3G14172 | 42.806 | 834 | 338 | 29 | 480 | 1280 | 489 | 1216 | 1.42e-145 | 473 |
MS.gene074589.t1 | AT3G14172 | 47.801 | 341 | 136 | 7 | 50 | 369 | 12 | 331 | 1.31e-75 | 275 |
MS.gene074589.t1 | AT3G14172 | 42.806 | 834 | 338 | 29 | 480 | 1280 | 519 | 1246 | 2.85e-145 | 473 |
MS.gene074589.t1 | AT3G14172 | 49.231 | 390 | 148 | 8 | 1 | 369 | 1 | 361 | 6.72e-93 | 327 |
MS.gene074589.t1 | AT3G14172 | 42.806 | 834 | 338 | 29 | 480 | 1280 | 527 | 1254 | 4.28e-145 | 473 |
MS.gene074589.t1 | AT3G14172 | 51.026 | 390 | 149 | 7 | 1 | 369 | 1 | 369 | 1.49e-100 | 349 |
MS.gene074589.t1 | AT1G17360 | 36.378 | 646 | 261 | 21 | 1 | 615 | 1 | 527 | 8.76e-85 | 300 |
MS.gene074589.t1 | AT1G17360 | 38.502 | 574 | 266 | 23 | 720 | 1271 | 530 | 1038 | 4.02e-74 | 268 |
MS.gene074589.t1 | AT1G72410 | 53.883 | 206 | 63 | 8 | 1082 | 1280 | 962 | 1142 | 2.69e-52 | 201 |
MS.gene074589.t1 | AT1G72410 | 58.659 | 179 | 54 | 7 | 1082 | 1254 | 962 | 1126 | 8.18e-51 | 197 |
MS.gene074589.t1 | AT5G43310 | 32.773 | 238 | 126 | 3 | 1 | 205 | 1 | 237 | 8.95e-31 | 132 |
MS.gene074589.t1 | AT5G43310 | 32.773 | 238 | 126 | 3 | 1 | 205 | 1 | 237 | 9.78e-31 | 132 |
MS.gene074589.t1 | AT5G43310 | 32.773 | 238 | 126 | 3 | 1 | 205 | 1 | 237 | 9.78e-31 | 132 |
MS.gene074589.t1 | AT5G43310 | 32.773 | 238 | 126 | 3 | 1 | 205 | 1 | 237 | 1.09e-30 | 132 |
MS.gene074589.t1 | AT1G61100 | 33.482 | 224 | 124 | 6 | 1 | 203 | 1 | 220 | 1.70e-27 | 121 |
MS.gene074589.t1 | AT1G61100 | 33.333 | 225 | 124 | 6 | 1 | 203 | 1 | 221 | 2.15e-27 | 120 |
MS.gene074589.t1 | AT4G27430 | 35.000 | 220 | 126 | 4 | 1 | 205 | 1 | 218 | 3.20e-27 | 120 |
MS.gene074589.t1 | AT4G27430 | 35.000 | 220 | 126 | 4 | 1 | 205 | 1 | 218 | 3.20e-27 | 120 |
MS.gene074589.t1 | AT5G43310 | 49.550 | 111 | 55 | 1 | 1 | 111 | 1 | 110 | 4.66e-25 | 114 |
Find 306 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCTTTCCGGGGTTGATTT+TGG | 0.092794 | 8.3:+69643211 | None:intergenic |
TGCCAACCCTGCAGAGTTTA+AGG | 0.106571 | 8.3:-69643892 | MS.gene074589:CDS |
CTTGGGTTTGGGCTTGGTTA+TGG | 0.153240 | 8.3:+69646120 | None:intergenic |
CCATGGGGACACGGAGTAAA+AGG | 0.183987 | 8.3:-69645248 | MS.gene074589:CDS |
TCTTCCGTTGTTGGTTTAAA+TGG | 0.187586 | 8.3:-69645420 | MS.gene074589:CDS |
ATCAAGGTCTTTCCTTAAAA+AGG | 0.187737 | 8.3:-69643781 | MS.gene074589:CDS |
TGTTAATGATAATAATAATT+TGG | 0.201403 | 8.3:-69645724 | MS.gene074589:CDS |
GATCATCCCTCAGTTTAAAA+TGG | 0.210298 | 8.3:+69641776 | None:intergenic |
TTGGGTTTGGGCTTGGTTAT+GGG | 0.217295 | 8.3:+69646121 | None:intergenic |
AGCCAGGAATCTGGTAATTC+TGG | 0.228359 | 8.3:-69643558 | MS.gene074589:CDS |
AATTTCTCGGAGCTTAATAT+TGG | 0.242108 | 8.3:-69644652 | MS.gene074589:CDS |
AACTTTAAATGGTCCAAGTA+TGG | 0.255883 | 8.3:+69650275 | None:intergenic |
GGATGTTTGGGCTTGGGTTT+GGG | 0.262884 | 8.3:+69646109 | None:intergenic |
TTTAAGCGATTACTAAAGTT+TGG | 0.269580 | 8.3:-69643177 | MS.gene074589:CDS |
TTCTGGTAGAAAACAGGTTT+TGG | 0.275254 | 8.3:-69645184 | MS.gene074589:CDS |
TGGTTCAGGCACATTGCTTC+TGG | 0.278758 | 8.3:+69644747 | None:intergenic |
TGGATGTTTGGGCTTGGGTT+TGG | 0.282169 | 8.3:+69646108 | None:intergenic |
AGTGCAAATATGAATCTTTC+TGG | 0.285893 | 8.3:-69645201 | MS.gene074589:CDS |
TTTGGGCTTGGGTTTGGGCT+TGG | 0.288759 | 8.3:+69646114 | None:intergenic |
TTCACCATTTCTAAAACTTC+TGG | 0.289259 | 8.3:+69650034 | None:intergenic |
GAGGTTGCCACGTGGATGTT+TGG | 0.289865 | 8.3:+69646096 | None:intergenic |
CAATCTAGAAGACCTGTAAT+AGG | 0.291798 | 8.3:-69644868 | MS.gene074589:CDS |
GATACTTTGCTCCTCTTCAT+TGG | 0.292920 | 8.3:+69643959 | None:intergenic |
GAGTAAAAGGGATGAGATTC+GGG | 0.297497 | 8.3:-69645235 | MS.gene074589:CDS |
CACATTCTGTGCAGTCTATC+AGG | 0.298189 | 8.3:-69650235 | MS.gene074589:CDS |
GCCACGTGGATGTTTGGGCT+TGG | 0.300860 | 8.3:+69646102 | None:intergenic |
AATCTTCCATATCATATTCT+AGG | 0.311110 | 8.3:+69643673 | None:intergenic |
GAGCATAAACTGAGGGTTCC+TGG | 0.322988 | 8.3:-69645033 | MS.gene074589:CDS |
ATTTCTCGGAGCTTAATATT+GGG | 0.324140 | 8.3:-69644651 | MS.gene074589:CDS |
GACTCATGCGGGTAAGAAAA+AGG | 0.330755 | 8.3:+69643378 | None:intergenic |
ATGAGGCGCGCGTGAGTTCC+AGG | 0.333119 | 8.3:+69643401 | None:intergenic |
GACTCCGTTGAAATTTGATT+TGG | 0.333642 | 8.3:-69643835 | MS.gene074589:CDS |
TAAGGCAAAGTCTGTCTTTA+CGG | 0.334094 | 8.3:-69643923 | MS.gene074589:CDS |
GGTAATTCTGGGTCTGAAAT+TGG | 0.335276 | 8.3:-69643546 | MS.gene074589:CDS |
TGAGTTGAGTCCCCTATTAC+AGG | 0.339701 | 8.3:+69644856 | None:intergenic |
TCTAATTCCTCTTCCGTTGT+TGG | 0.341703 | 8.3:-69645429 | MS.gene074589:CDS |
ATATCAGGAAGTTCATTAAA+AGG | 0.344001 | 8.3:-69641751 | None:intergenic |
ACAAGATGAAATTGGAAGTA+TGG | 0.344027 | 8.3:-69643628 | MS.gene074589:CDS |
GAAAACACAAAGCCTTCTTC+TGG | 0.348550 | 8.3:-69644035 | MS.gene074589:CDS |
CCTGAACCAGCTGTGAGTTC+GGG | 0.351175 | 8.3:-69644733 | MS.gene074589:CDS |
TTTCTCAAATCAGAGAAGTT+TGG | 0.352015 | 8.3:+69644059 | None:intergenic |
GTTTATTATTACGTCGTTGT+TGG | 0.353074 | 8.3:+69646034 | None:intergenic |
GACCTTGATGATTGATCATA+AGG | 0.355912 | 8.3:+69643795 | None:intergenic |
CGGTGGATAGTCAGAATTAT+GGG | 0.357242 | 8.3:-69644690 | MS.gene074589:CDS |
AGCTGAAGCTTTGAAGAATC+AGG | 0.361383 | 8.3:-69645343 | MS.gene074589:CDS |
TCTTGTTGAGTAATGAGTTC+TGG | 0.362227 | 8.3:+69646233 | None:intergenic |
AAAGTTGATGGAAATGCATT+AGG | 0.362668 | 8.3:+69643471 | None:intergenic |
TTCTTCTGACGTGGGGTTCA+AGG | 0.362962 | 8.3:-69645673 | MS.gene074589:CDS |
AGGTTGCCACGTGGATGTTT+GGG | 0.365025 | 8.3:+69646097 | None:intergenic |
TGTTGATGCACGCGTAGAAC+AGG | 0.367067 | 8.3:-69644827 | MS.gene074589:CDS |
CCTACACCGTTGAAAGTTGA+TGG | 0.367258 | 8.3:+69643459 | None:intergenic |
ACAGGGGAACAAGATGAAAT+TGG | 0.368444 | 8.3:-69643636 | MS.gene074589:CDS |
GCTCCTCTGCGAACTTTAAA+TGG | 0.372307 | 8.3:+69650264 | None:intergenic |
GAATTCTCGTTCCCTTATCC+AGG | 0.373969 | 8.3:-69643307 | MS.gene074589:CDS |
CCTAACAGAAATGTGTCTTC+AGG | 0.374477 | 8.3:-69644158 | MS.gene074589:CDS |
GCTTCTATAGATTCTCCTAT+TGG | 0.375336 | 8.3:-69643342 | MS.gene074589:CDS |
TTGGGCTTGGTTATGGGCTT+CGG | 0.375633 | 8.3:+69646127 | None:intergenic |
AAGGCAGAGTAAAGGAAATC+AGG | 0.377479 | 8.3:-69645109 | MS.gene074589:CDS |
CGCTGATGCACGTGTGGAAC+AGG | 0.380367 | 8.3:-69644977 | MS.gene074589:CDS |
GAAGAGGAATGCTAAACTTC+AGG | 0.380932 | 8.3:-69644590 | MS.gene074589:CDS |
AATGACGATGTTAAGTTTGA+TGG | 0.381260 | 8.3:-69645582 | MS.gene074589:CDS |
AATCTAGAAGACCTGTAATA+GGG | 0.383907 | 8.3:-69644867 | MS.gene074589:CDS |
CCACGTGGATGTTTGGGCTT+GGG | 0.384132 | 8.3:+69646103 | None:intergenic |
CCTGAAGACACATTTCTGTT+AGG | 0.387490 | 8.3:+69644158 | None:intergenic |
CATCATTCTCACCCTGGATA+AGG | 0.388526 | 8.3:+69643295 | None:intergenic |
TTAAGCGATTACTAAAGTTT+GGG | 0.392620 | 8.3:-69643176 | MS.gene074589:CDS |
GGACAGAGACTTTGGCTGAT+TGG | 0.392953 | 8.3:-69643140 | MS.gene074589:CDS |
CTCCTATTGGTAGCCCTGCT+TGG | 0.398520 | 8.3:-69643329 | MS.gene074589:CDS |
TTCTGAAGGAGATGATGATA+TGG | 0.400701 | 8.3:-69643103 | MS.gene074589:CDS |
AAGGAAAAGATGATCTCAAA+TGG | 0.401892 | 8.3:+69645370 | None:intergenic |
ACGGTGGATAGTCAGAATTA+TGG | 0.404942 | 8.3:-69644691 | MS.gene074589:CDS |
GAATCTTTCTGGTAGAAAAC+AGG | 0.406049 | 8.3:-69645190 | MS.gene074589:CDS |
ACCCAGAATTACCAGATTCC+TGG | 0.409590 | 8.3:+69643556 | None:intergenic |
TTGAGTTGAGAGACAGTGTA+AGG | 0.409901 | 8.3:+69647257 | None:intergenic |
TAGGTCATTGAATTCTTTCT+CGG | 0.411868 | 8.3:+69643692 | None:intergenic |
TGAGTTGAATCCACTATTCC+AGG | 0.412186 | 8.3:+69644931 | None:intergenic |
TGTCTGTTCTTTATTACTGC+TGG | 0.413181 | 8.3:+69645965 | None:intergenic |
CTGAGGGATGATCATATATC+AGG | 0.416209 | 8.3:-69641766 | MS.gene074589:CDS |
CAATGACCTAGAATATGATA+TGG | 0.416299 | 8.3:-69643679 | MS.gene074589:CDS |
GGCACATTGCTTCTGGAAGA+TGG | 0.416791 | 8.3:+69644754 | None:intergenic |
TGATGCAGAGATGTCTCAAT+TGG | 0.418080 | 8.3:-69650005 | MS.gene074589:CDS |
TTCAAAGCTTCAGCTTCTAA+AGG | 0.418516 | 8.3:+69645351 | None:intergenic |
CCCGAACTCACAGCTGGTTC+AGG | 0.420312 | 8.3:+69644733 | None:intergenic |
GGAGTAAAAGGGATGAGATT+CGG | 0.421145 | 8.3:-69645236 | MS.gene074589:CDS |
TATGCTAATGCATCAGCATC+TGG | 0.422062 | 8.3:-69647287 | MS.gene074589:CDS |
TACACATGTAACGGTACCTT+TGG | 0.422345 | 8.3:-69645148 | MS.gene074589:CDS |
ATCATTCTCACCCTGGATAA+GGG | 0.424961 | 8.3:+69643296 | None:intergenic |
TCATTCTGAAGGGAATCTAT+AGG | 0.426226 | 8.3:+69644254 | None:intergenic |
TGTTCTACGCGTGCATCAAC+AGG | 0.426291 | 8.3:+69644829 | None:intergenic |
TAATCCTGATGCTAGTTTCT+CGG | 0.430373 | 8.3:+69650304 | None:intergenic |
TCAGCTCAGTTTGAAGGTAG+TGG | 0.430622 | 8.3:-69645489 | MS.gene074589:CDS |
TTGTCCTCTTTGAACTCAGA+TGG | 0.430904 | 8.3:-69643867 | MS.gene074589:CDS |
GCCTGAACCAGCTGTGAGTT+CGG | 0.430971 | 8.3:-69644734 | MS.gene074589:CDS |
AATTGTCTCCGAAGCGTTCA+AGG | 0.431518 | 8.3:-69650469 | MS.gene074589:intron |
AGCATAAACTGAGGGTTCCT+GGG | 0.433064 | 8.3:-69645032 | MS.gene074589:CDS |
GGTTATAGACCCTGAAAACT+TGG | 0.434505 | 8.3:+69644480 | None:intergenic |
GAAACCAGTACCTGCTAGTT+CGG | 0.437323 | 8.3:-69645277 | MS.gene074589:CDS |
GTTAGTCTGAGCCAGGAATC+TGG | 0.439275 | 8.3:-69643567 | MS.gene074589:CDS |
AGGGTTCCTGGGGATCAATC+TGG | 0.443242 | 8.3:-69645021 | MS.gene074589:CDS |
GACAAATCCTTAAACTCTGC+AGG | 0.444442 | 8.3:+69643885 | None:intergenic |
CTGTTGAGAGTCCTGTGTCC+TGG | 0.445287 | 8.3:-69643419 | MS.gene074589:CDS |
TATGGACGATGGCCGAGATC+TGG | 0.447248 | 8.3:-69643085 | MS.gene074589:CDS |
AAGATAGTCTTGAGCGGAGT+AGG | 0.448279 | 8.3:-69644516 | MS.gene074589:CDS |
CTGGAAAGCCGGTCGAGCTT+CGG | 0.449448 | 8.3:-69645833 | MS.gene074589:CDS |
TGGAACAGAATCAGAGAGTA+AGG | 0.450433 | 8.3:-69645128 | MS.gene074589:CDS |
TTAAAATGGGCGGGAGGTGC+AGG | 0.455887 | 8.3:+69641790 | None:intergenic |
TCAGGTACACCTCGCACAAC+AGG | 0.457937 | 8.3:-69644140 | MS.gene074589:CDS |
AGGAAAAGATGATCTCAAAT+GGG | 0.458016 | 8.3:+69645371 | None:intergenic |
GTGTCAATGTCACGTCCATC+TGG | 0.458396 | 8.3:-69644116 | MS.gene074589:CDS |
CTTCATCCTCTTCATTCTGA+AGG | 0.461063 | 8.3:+69644243 | None:intergenic |
AACTCGTGGGACAGAGACTT+TGG | 0.462395 | 8.3:-69643148 | MS.gene074589:CDS |
GCCAGGAATCTGGTAATTCT+GGG | 0.462442 | 8.3:-69643557 | MS.gene074589:CDS |
AATGTCTTATTTCAGGGGAC+AGG | 0.463253 | 8.3:-69649865 | MS.gene074589:intron |
AGGATTAGTGAAGCCATACT+TGG | 0.464079 | 8.3:-69650288 | MS.gene074589:CDS |
AGCTTTGAAGAATCAGGTTA+AGG | 0.464390 | 8.3:-69645337 | MS.gene074589:CDS |
TGCTGTAAGGCAAAATTTCT+CGG | 0.467310 | 8.3:-69644665 | MS.gene074589:CDS |
ATGCTAAACTTCAGGAAGAA+TGG | 0.467513 | 8.3:-69644582 | MS.gene074589:CDS |
GAAGAATCAGGTTAAGGAAG+AGG | 0.467828 | 8.3:-69645331 | MS.gene074589:CDS |
GTCTAGAAGACCTGGAATAG+TGG | 0.468174 | 8.3:-69644941 | MS.gene074589:CDS |
TTCCAAGCAGGGCTACCAAT+AGG | 0.468469 | 8.3:+69643327 | None:intergenic |
AAGCAAACCAACCCGCTCTC+AGG | 0.468923 | 8.3:-69644009 | MS.gene074589:CDS |
CCCCGGAAAGATGTTGCAAA+AGG | 0.469597 | 8.3:-69643201 | MS.gene074589:CDS |
GAAGAATTAGCAACAAGATA+AGG | 0.470636 | 8.3:+69643234 | None:intergenic |
AGACTTGAGGAAGTCGAGAA+TGG | 0.471343 | 8.3:-69643046 | MS.gene074589:CDS |
GGGGATGGAACAAGAGTAAT+CGG | 0.473196 | 8.3:-69648523 | MS.gene074589:CDS |
TTTAAAGTTCGCAGAGGAGC+AGG | 0.473418 | 8.3:-69650261 | MS.gene074589:CDS |
CGCCCTGCCTGTGCCGGCGT+TGG | 0.475839 | 8.3:+69645912 | None:intergenic |
CAGGACACAGGACTCTCAAC+AGG | 0.476046 | 8.3:+69643420 | None:intergenic |
CTTGTTCCCCTGTGGCCGTA+TGG | 0.477358 | 8.3:+69643646 | None:intergenic |
TAGAGAGTTGAAGGTGGTGA+AGG | 0.477976 | 8.3:+69646067 | None:intergenic |
ATTAAAAGCACTATCTTCAA+TGG | 0.481053 | 8.3:+69643605 | None:intergenic |
TCTCAACGCGCAGATAAACT+TGG | 0.481664 | 8.3:-69644436 | MS.gene074589:CDS |
ATGACGATGTTAAGTTTGAT+GGG | 0.482204 | 8.3:-69645581 | MS.gene074589:CDS |
ATCATCCCTCAGTTTAAAAT+GGG | 0.482489 | 8.3:+69641777 | None:intergenic |
ATGGCCGAGATCTGGCCAAC+CGG | 0.483788 | 8.3:-69643077 | MS.gene074589:CDS |
TTGTCTCTTCGTTTGCCAGA+TGG | 0.487249 | 8.3:+69644101 | None:intergenic |
TCCTCAAGTCTTCTGATGAC+CGG | 0.488254 | 8.3:+69643058 | None:intergenic |
TCACCAACGCCGGCACAGGC+AGG | 0.490050 | 8.3:-69645915 | MS.gene074589:CDS |
TGTTCCGAACTAGCAGGTAC+TGG | 0.490653 | 8.3:+69645273 | None:intergenic |
GACTTGAGGAAGTCGAGAAT+GGG | 0.491125 | 8.3:-69643045 | MS.gene074589:CDS |
GACATTCTCCGAAGCTCGAC+CGG | 0.494736 | 8.3:+69645825 | None:intergenic |
CACAGGTTTGTGCGGTATGT+TGG | 0.496046 | 8.3:-69650061 | MS.gene074589:intron |
GGTGCCGTCGTTATTGCTGT+TGG | 0.497703 | 8.3:+69645986 | None:intergenic |
AAGGTTGTGAAAACTGATCA+AGG | 0.498183 | 8.3:-69645699 | MS.gene074589:CDS |
GATTCATTCCATACGGCCAC+AGG | 0.500497 | 8.3:-69643654 | MS.gene074589:CDS |
GAGATTGAGTGCAGTTAGGC+AGG | 0.501270 | 8.3:-69647324 | MS.gene074589:CDS |
GTGGTGGTGCATTCAAATCA+AGG | 0.504288 | 8.3:-69645464 | MS.gene074589:CDS |
ATGAAAAGTACATGAAGAAG+AGG | 0.505881 | 8.3:-69644606 | MS.gene074589:CDS |
AAGGTTCTTCTTCATCAGAT+AGG | 0.506149 | 8.3:-69645638 | MS.gene074589:CDS |
CAAGGGTCTTCTTCTGACGT+GGG | 0.508947 | 8.3:-69645681 | MS.gene074589:CDS |
GGTGATGACGGCAACGGCGT+CGG | 0.509621 | 8.3:+69645933 | None:intergenic |
TATCAGGATGAAAGCTTCAA+TGG | 0.510924 | 8.3:-69643724 | MS.gene074589:CDS |
CACTACTACCACTCCACCGC+CGG | 0.511212 | 8.3:+69645790 | None:intergenic |
GAATTTGCTCCAGGCGGGGA+TGG | 0.511390 | 8.3:-69648538 | MS.gene074589:intron |
ATCCTTAAACTCTGCAGGGT+TGG | 0.511571 | 8.3:+69643890 | None:intergenic |
TCATTGAAGCTTTCGTCAGA+AGG | 0.512321 | 8.3:+69643006 | None:intergenic |
ATAGTTTCTCACCTGAGAGC+GGG | 0.512328 | 8.3:+69643998 | None:intergenic |
CTTTCAACGGTGTAGGATCT+CGG | 0.512825 | 8.3:-69643452 | MS.gene074589:CDS |
ATGTGAGATTGAGTGCAGTT+AGG | 0.513110 | 8.3:-69647328 | MS.gene074589:CDS |
AGTCGTCGCCCTGCCTGTGC+CGG | 0.513589 | 8.3:+69645906 | None:intergenic |
GTATCAAGGAAGAGAAGCTA+AGG | 0.515763 | 8.3:-69643941 | MS.gene074589:CDS |
TGGAAAGGTTAGTCTGAGCC+AGG | 0.515819 | 8.3:-69643574 | MS.gene074589:CDS |
GCAGTACCAGATTGATCCCC+AGG | 0.517831 | 8.3:+69645015 | None:intergenic |
TGTCCTCTTTGAACTCAGAT+GGG | 0.518994 | 8.3:-69643866 | MS.gene074589:CDS |
GGTTTGCTTACTCCAGAAGA+AGG | 0.522653 | 8.3:+69644023 | None:intergenic |
TGTTCCACACGTGCATCAGC+GGG | 0.524887 | 8.3:+69644979 | None:intergenic |
TGGTTGCTACATCACTTGGT+AGG | 0.525917 | 8.3:-69645539 | MS.gene074589:CDS |
ATGACCGGTTGGCCAGATCT+CGG | 0.526896 | 8.3:+69643073 | None:intergenic |
TGAAGAGGAGCAAAGTATCA+AGG | 0.528530 | 8.3:-69643955 | MS.gene074589:CDS |
TGTTCTACGTGCACATCAGC+AGG | 0.530794 | 8.3:+69644904 | None:intergenic |
ATGGTGCTTCAAAGCAAAGT+AGG | 0.531251 | 8.3:-69644190 | MS.gene074589:CDS |
TCCCTCAGTTTAAAATGGGC+GGG | 0.532504 | 8.3:+69641781 | None:intergenic |
CCATCAACTTTCAACGGTGT+AGG | 0.533225 | 8.3:-69643459 | MS.gene074589:CDS |
TTCTTCGTCTTCGTTATCGA+TGG | 0.536054 | 8.3:+69646151 | None:intergenic |
TCAAGGGTCTTCTTCTGACG+TGG | 0.536315 | 8.3:-69645682 | MS.gene074589:CDS |
CAGTTTGAAGGTAGTGGTGG+TGG | 0.536443 | 8.3:-69645483 | MS.gene074589:CDS |
CTGTTCCACACGTGCATCAG+CGG | 0.537964 | 8.3:+69644978 | None:intergenic |
GGAGTTGAGTCTCCTACTCC+AGG | 0.540927 | 8.3:+69644781 | None:intergenic |
GATGATTGATCATAAGGGCT+CGG | 0.541574 | 8.3:+69643801 | None:intergenic |
ACAGATCAGAGAAGGAAGCT+AGG | 0.541744 | 8.3:-69644552 | MS.gene074589:CDS |
GAGTTGCTTGTTTCAAGTGA+TGG | 0.543765 | 8.3:-69650332 | MS.gene074589:CDS |
GTTACGTTGTAGAGAGTTGA+AGG | 0.544461 | 8.3:+69646058 | None:intergenic |
ATTTAAACCAACAACGGAAG+AGG | 0.545934 | 8.3:+69645422 | None:intergenic |
TCCTTTCGTAAACCATGTCT+CGG | 0.546079 | 8.3:+69650187 | None:intergenic |
AGATAGTCTTGAGCGGAGTA+GGG | 0.546356 | 8.3:-69644515 | MS.gene074589:CDS |
TGGTAGTTTACTTCAAGCGA+TGG | 0.547556 | 8.3:+69647210 | None:intergenic |
TATCTGCACCTTGAACGCTT+CGG | 0.549264 | 8.3:+69650461 | None:intergenic |
ACTCTCTGATTCTGTTCCAA+AGG | 0.549401 | 8.3:+69645132 | None:intergenic |
ATCTCTGTTACAACTTCTGA+AGG | 0.549505 | 8.3:-69643117 | MS.gene074589:CDS |
ATGGTTTGTTCCGAACTAGC+AGG | 0.550367 | 8.3:+69645267 | None:intergenic |
TTCATCCTCTTCATTCTGAA+GGG | 0.551403 | 8.3:+69644244 | None:intergenic |
AGTTTGGTACAGACTGCGCA+AGG | 0.553497 | 8.3:+69644075 | None:intergenic |
TGAAGCTTTCGTCAGAAGGA+TGG | 0.553546 | 8.3:+69643010 | None:intergenic |
ACCTTGATGATTGATCATAA+GGG | 0.555139 | 8.3:+69643796 | None:intergenic |
TTTCTCGGAGCTTAATATTG+GGG | 0.555166 | 8.3:-69644650 | MS.gene074589:CDS |
CAGAGAGTAAGGCAGAGTAA+AGG | 0.556082 | 8.3:-69645117 | MS.gene074589:CDS |
CAACGGTGTAGGATCTCGGC+AGG | 0.557408 | 8.3:-69643448 | MS.gene074589:CDS |
GCATTTCCATCAACTTTCAA+CGG | 0.557412 | 8.3:-69643465 | MS.gene074589:CDS |
AAAAGAAAATACTGGAAAGC+CGG | 0.557438 | 8.3:-69645844 | MS.gene074589:CDS |
GGTTGCTACATCACTTGGTA+GGG | 0.557575 | 8.3:-69645538 | MS.gene074589:CDS |
AAAACCAGGTCCTGCAGTGT+TGG | 0.559837 | 8.3:+69643758 | None:intergenic |
AGGGAACGAGAATTCCAAGC+AGG | 0.560307 | 8.3:+69643315 | None:intergenic |
CAAGTCTTCTGATGACCGGT+TGG | 0.561681 | 8.3:+69643062 | None:intergenic |
TGTGCCGGCGTTGGTGATGA+CGG | 0.562230 | 8.3:+69645921 | None:intergenic |
TTCACCGAGAAACTAGCATC+AGG | 0.562391 | 8.3:-69650308 | MS.gene074589:CDS |
ATAACCAGACAAAATTCAGC+AGG | 0.562447 | 8.3:-69644463 | MS.gene074589:CDS |
ATCCCTCAGTTTAAAATGGG+CGG | 0.563871 | 8.3:+69641780 | None:intergenic |
CATGAGCATTGACGCTAGCA+TGG | 0.566400 | 8.3:-69645766 | MS.gene074589:CDS |
TGCTAGTTCGGAACAAACCA+TGG | 0.567133 | 8.3:-69645265 | MS.gene074589:CDS |
AGAGAAGGAAGCTAGGATGA+AGG | 0.567425 | 8.3:-69644545 | MS.gene074589:CDS |
AACTCACAGTCTAGAAGACC+TGG | 0.568801 | 8.3:-69644949 | MS.gene074589:CDS |
GGTAGTTTACTTCAAGCGAT+GGG | 0.569272 | 8.3:+69647211 | None:intergenic |
TTGAGACATCTCTGCATCAA+AGG | 0.569583 | 8.3:+69650009 | None:intergenic |
TTAGTCCCCGAACTCACAGC+TGG | 0.572238 | 8.3:+69644727 | None:intergenic |
TAGCAGAAGCACCAATGAAG+AGG | 0.572636 | 8.3:-69643970 | MS.gene074589:CDS |
TGATAATAATAATTTGGACA+AGG | 0.575415 | 8.3:-69645718 | MS.gene074589:CDS |
GGCGTTGGTGATGACGGCAA+CGG | 0.575419 | 8.3:+69645927 | None:intergenic |
TTGCTTCTGGAAGATGGCTG+AGG | 0.575947 | 8.3:+69644760 | None:intergenic |
TTTGAAGGTAGTGGTGGTGG+TGG | 0.577036 | 8.3:-69645480 | MS.gene074589:CDS |
CGGAACAAACCATGGGGACA+CGG | 0.578400 | 8.3:-69645257 | MS.gene074589:CDS |
TTCGTTATCGATGGACATGT+CGG | 0.579689 | 8.3:+69646160 | None:intergenic |
CATGGGGACACGGAGTAAAA+GGG | 0.583032 | 8.3:-69645247 | MS.gene074589:CDS |
GAGTTTGAACAGATCAGAGA+AGG | 0.583828 | 8.3:-69644560 | MS.gene074589:CDS |
ATAGCACTGCCTACAAAACC+AGG | 0.584700 | 8.3:+69643744 | None:intergenic |
AATTCTCGTTCCCTTATCCA+GGG | 0.584993 | 8.3:-69643306 | MS.gene074589:CDS |
GTCATCACCAACGCCGGCAC+AGG | 0.585521 | 8.3:-69645919 | MS.gene074589:CDS |
TGCACGGAAGATATATTCGC+AGG | 0.588721 | 8.3:-69649978 | MS.gene074589:intron |
TATGGAAGATTCATTCCATA+CGG | 0.589840 | 8.3:-69643661 | MS.gene074589:CDS |
TGTACAGGAAGGAACTGCTA+AGG | 0.589887 | 8.3:-69647358 | MS.gene074589:intron |
AGATTCCCTTCAGAATGAAG+AGG | 0.590406 | 8.3:-69644249 | MS.gene074589:CDS |
TCTTCCAAATCAAATTTCAA+CGG | 0.592536 | 8.3:+69643831 | None:intergenic |
AATGTGGTTGCTACATCACT+TGG | 0.594624 | 8.3:-69645543 | MS.gene074589:CDS |
TCGAGAATGGGATTGTCTCA+TGG | 0.596972 | 8.3:-69643033 | MS.gene074589:CDS |
CACCAACGCCGGCACAGGCA+GGG | 0.597853 | 8.3:-69645914 | MS.gene074589:CDS |
CAATGTCAGAAGACTCATGC+GGG | 0.600644 | 8.3:+69643367 | None:intergenic |
ATCTAGAAGACCTGTAATAG+GGG | 0.600753 | 8.3:-69644866 | MS.gene074589:CDS |
GCTCAGTTTGAAGGTAGTGG+TGG | 0.600840 | 8.3:-69645486 | MS.gene074589:CDS |
AAGGCCAACACTGCAGGACC+TGG | 0.603051 | 8.3:-69643762 | MS.gene074589:CDS |
GCGCGTGAGTTCCAGGACAC+AGG | 0.605108 | 8.3:+69643408 | None:intergenic |
TTCAAGGATCATCAACTGAA+AGG | 0.605231 | 8.3:-69645657 | MS.gene074589:CDS |
AAGGGTCTTCTTCTGACGTG+GGG | 0.606885 | 8.3:-69645680 | MS.gene074589:CDS |
AGAATGATGCTGCTCGAATG+AGG | 0.608638 | 8.3:-69643281 | MS.gene074589:CDS |
TTTGGTACAGACTGCGCAAG+GGG | 0.609859 | 8.3:+69644077 | None:intergenic |
GCCCTTATGATCAATCATCA+AGG | 0.612177 | 8.3:-69643797 | MS.gene074589:CDS |
GCTAGTTCGGAACAAACCAT+GGG | 0.613627 | 8.3:-69645264 | MS.gene074589:CDS |
AATTCACAGTCTAGAAGACC+TGG | 0.613652 | 8.3:-69644799 | MS.gene074589:CDS |
TTTCTCACCTGAGAGCGGGT+TGG | 0.616190 | 8.3:+69644002 | None:intergenic |
GACTAAGTCACTTATGAAGA+CGG | 0.616319 | 8.3:-69644710 | MS.gene074589:CDS |
TTACGAAAGGAACATTTGAG+AGG | 0.616763 | 8.3:-69650175 | MS.gene074589:intron |
ATTCATTCCATACGGCCACA+GGG | 0.617363 | 8.3:-69643653 | MS.gene074589:CDS |
CAGTCTAGAAGACCTGGAGT+AGG | 0.617843 | 8.3:-69644793 | MS.gene074589:CDS |
CTGAACCAGCTGTGAGTTCG+GGG | 0.618997 | 8.3:-69644732 | MS.gene074589:CDS |
GCCGAGACATGGTTTACGAA+AGG | 0.622262 | 8.3:-69650188 | MS.gene074589:CDS |
TGAGCCCGCTGATGCACGTG+TGG | 0.623663 | 8.3:-69644983 | MS.gene074589:CDS |
CATAGTTTCTCACCTGAGAG+CGG | 0.624037 | 8.3:+69643997 | None:intergenic |
GAGCAGCATCATTCTCACCC+TGG | 0.624179 | 8.3:+69643289 | None:intergenic |
GACGTAGAAATGCCGAGACA+TGG | 0.624776 | 8.3:-69650199 | MS.gene074589:CDS |
AATTTCATCTTGTTCCCCTG+TGG | 0.625503 | 8.3:+69643638 | None:intergenic |
ACAAATCCTTAAACTCTGCA+GGG | 0.627468 | 8.3:+69643886 | None:intergenic |
AACACCATTTAAACCAACAA+CGG | 0.627589 | 8.3:+69645416 | None:intergenic |
GTACAGGAAGGAACTGCTAA+GGG | 0.628039 | 8.3:-69647357 | MS.gene074589:intron |
TCAGGATAGTACACATGTAA+CGG | 0.628758 | 8.3:-69645157 | MS.gene074589:CDS |
AATCCCATCTGAGTTCAAAG+AGG | 0.629072 | 8.3:+69643863 | None:intergenic |
TGTCTCAATTGGAAGCTGCA+CGG | 0.630977 | 8.3:-69649994 | MS.gene074589:CDS |
ACCGGTCATCAGAAGACTTG+AGG | 0.631776 | 8.3:-69643059 | MS.gene074589:CDS |
ACCAGACAAAATTCAGCAGG+AGG | 0.636055 | 8.3:-69644460 | MS.gene074589:CDS |
GTTGATGCACGCGTAGAACA+GGG | 0.637485 | 8.3:-69644826 | MS.gene074589:CDS |
AGGTTGTGAAAACTGATCAA+GGG | 0.642830 | 8.3:-69645698 | MS.gene074589:CDS |
ATTCTTCCCAAAATCAACCC+CGG | 0.643884 | 8.3:-69643218 | MS.gene074589:CDS |
GGGATCAATCTGGTACTGCA+CGG | 0.644151 | 8.3:-69645011 | MS.gene074589:CDS |
GGTGGATAGTCAGAATTATG+GGG | 0.644647 | 8.3:-69644689 | MS.gene074589:CDS |
AATATTGGGGATGAATCTAG+AGG | 0.645498 | 8.3:-69644637 | MS.gene074589:CDS |
GTTTGGTACAGACTGCGCAA+GGG | 0.646573 | 8.3:+69644076 | None:intergenic |
AATGAGCTGTTCAACGAACA+CGG | 0.648737 | 8.3:-69642982 | MS.gene074589:intron |
GACGATGTTAAGTTTGATGG+GGG | 0.649104 | 8.3:-69645579 | MS.gene074589:CDS |
ATCAAATATAAAGAGAGACC+AGG | 0.649669 | 8.3:-69644404 | MS.gene074589:intron |
TGACGATGTTAAGTTTGATG+GGG | 0.649774 | 8.3:-69645580 | MS.gene074589:CDS |
GCATAAACTGAGGGTTCCTG+GGG | 0.651161 | 8.3:-69645031 | MS.gene074589:CDS |
GGAAAAGATGATCTCAAATG+GGG | 0.652354 | 8.3:+69645372 | None:intergenic |
GGGGACAGGAGATCAGCGCA+TGG | 0.661082 | 8.3:-69649851 | MS.gene074589:CDS |
CTCAGTTTAAAATGGGCGGG+AGG | 0.661370 | 8.3:+69641784 | None:intergenic |
GGGAACGAGAATTCCAAGCA+GGG | 0.661444 | 8.3:+69643316 | None:intergenic |
TGGTGGTGCATTCAAATCAA+GGG | 0.664398 | 8.3:-69645463 | MS.gene074589:CDS |
ATGATGCTCACAGGTTTGTG+CGG | 0.666085 | 8.3:-69650069 | MS.gene074589:intron |
GGACCATTTAAAGTTCGCAG+AGG | 0.668490 | 8.3:-69650267 | MS.gene074589:CDS |
GGGTGTGAAAAGTAATAATG+TGG | 0.669968 | 8.3:-69645559 | MS.gene074589:CDS |
GCATGACGAGTTGAAGCTGA+AGG | 0.672898 | 8.3:-69645082 | MS.gene074589:CDS |
CTGAAATTGGTGATTCTACG+AGG | 0.677991 | 8.3:-69643533 | MS.gene074589:CDS |
GTTGCCGTCATCACCAACGC+CGG | 0.684269 | 8.3:-69645925 | MS.gene074589:CDS |
AAAAGGGATGAGATTCGGGG+TGG | 0.686111 | 8.3:-69645231 | MS.gene074589:CDS |
ATTGACACTCCTGTTGTGCG+AGG | 0.689849 | 8.3:+69644131 | None:intergenic |
CAATGCAAGATAGTCTTGAG+CGG | 0.692628 | 8.3:-69644522 | MS.gene074589:CDS |
AAGATCTTGAATGACTACGG+TGG | 0.694140 | 8.3:+69645514 | None:intergenic |
GTGGATAGTCAGAATTATGG+GGG | 0.696577 | 8.3:-69644688 | MS.gene074589:CDS |
TTCATTCCATACGGCCACAG+GGG | 0.700611 | 8.3:-69643652 | MS.gene074589:CDS |
GATCAGCGCATGGATTCACA+AGG | 0.700761 | 8.3:-69649841 | MS.gene074589:intron |
TAAGTCACTTATGAAGACGG+TGG | 0.702124 | 8.3:-69644707 | MS.gene074589:CDS |
AGTAAAAGGGATGAGATTCG+GGG | 0.702463 | 8.3:-69645234 | MS.gene074589:CDS |
GAAGCCAACAGCAATAACGA+CGG | 0.709829 | 8.3:-69645990 | MS.gene074589:CDS |
ACGTTGTAGAGAGTTGAAGG+TGG | 0.713152 | 8.3:+69646061 | None:intergenic |
CAAGACGACGAAAAGTCACG+TGG | 0.713674 | 8.3:-69646215 | MS.gene074589:CDS |
GGAGATGATGATATGGACGA+TGG | 0.713828 | 8.3:-69643096 | MS.gene074589:CDS |
CCCAAGCCCAAACATCCACG+TGG | 0.722286 | 8.3:-69646103 | MS.gene074589:CDS |
TCAATGTCAGAAGACTCATG+CGG | 0.734206 | 8.3:+69643366 | None:intergenic |
TGGAACAAGAGTAATCGGAG+CGG | 0.770089 | 8.3:-69648518 | MS.gene074589:CDS |
CTAGTTCGGAACAAACCATG+GGG | 0.780495 | 8.3:-69645263 | MS.gene074589:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 69641752 | 69650528 | 69641752 | ID=MS.gene074589 |
chr8.3 | mRNA | 69641752 | 69650528 | 69641752 | ID=MS.gene074589.t1;Parent=MS.gene074589 |
chr8.3 | exon | 69650470 | 69650528 | 69650470 | ID=MS.gene074589.t1.exon1;Parent=MS.gene074589.t1 |
chr8.3 | CDS | 69650470 | 69650528 | 69650470 | ID=cds.MS.gene074589.t1;Parent=MS.gene074589.t1 |
chr8.3 | exon | 69650176 | 69650358 | 69650176 | ID=MS.gene074589.t1.exon2;Parent=MS.gene074589.t1 |
chr8.3 | CDS | 69650176 | 69650358 | 69650176 | ID=cds.MS.gene074589.t1;Parent=MS.gene074589.t1 |
chr8.3 | exon | 69649979 | 69650078 | 69649979 | ID=MS.gene074589.t1.exon3;Parent=MS.gene074589.t1 |
chr8.3 | CDS | 69649979 | 69650078 | 69649979 | ID=cds.MS.gene074589.t1;Parent=MS.gene074589.t1 |
chr8.3 | exon | 69649842 | 69649872 | 69649842 | ID=MS.gene074589.t1.exon4;Parent=MS.gene074589.t1 |
chr8.3 | CDS | 69649842 | 69649872 | 69649842 | ID=cds.MS.gene074589.t1;Parent=MS.gene074589.t1 |
chr8.3 | exon | 69648505 | 69648547 | 69648505 | ID=MS.gene074589.t1.exon5;Parent=MS.gene074589.t1 |
chr8.3 | CDS | 69648505 | 69648547 | 69648505 | ID=cds.MS.gene074589.t1;Parent=MS.gene074589.t1 |
chr8.3 | exon | 69647221 | 69647373 | 69647221 | ID=MS.gene074589.t1.exon6;Parent=MS.gene074589.t1 |
chr8.3 | CDS | 69647221 | 69647373 | 69647221 | ID=cds.MS.gene074589.t1;Parent=MS.gene074589.t1 |
chr8.3 | exon | 69644405 | 69646295 | 69644405 | ID=MS.gene074589.t1.exon7;Parent=MS.gene074589.t1 |
chr8.3 | CDS | 69644405 | 69646295 | 69644405 | ID=cds.MS.gene074589.t1;Parent=MS.gene074589.t1 |
chr8.3 | exon | 69642983 | 69644279 | 69642983 | ID=MS.gene074589.t1.exon8;Parent=MS.gene074589.t1 |
chr8.3 | CDS | 69642983 | 69644279 | 69642983 | ID=cds.MS.gene074589.t1;Parent=MS.gene074589.t1 |
chr8.3 | exon | 69641752 | 69641835 | 69641752 | ID=MS.gene074589.t1.exon9;Parent=MS.gene074589.t1 |
chr8.3 | CDS | 69641752 | 69641835 | 69641752 | ID=cds.MS.gene074589.t1;Parent=MS.gene074589.t1 |
Gene Sequence |
Protein sequence |