Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074629.t1 | XP_003592706.1 | 100 | 567 | 0 | 0 | 3 | 569 | 1 | 567 | 0.00E+00 | 1139 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074629.t1 | Q8LPJ4 | 91.0 | 567 | 50 | 1 | 3 | 569 | 1 | 566 | 1.5e-303 | 1042.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074629.t1 | G7IE72 | 100.0 | 567 | 0 | 0 | 3 | 569 | 1 | 567 | 0.0e+00 | 1139.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene074629 | 0.843282 | 1.54E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAATTTAATTTAATTAT+AGG | - | 10784:2457-2476 | MS.gene074629:CDS | 0.0% |
| !!! | TAATTTAATATTTATTTTAA+TGG | + | 10784:4970-4989 | MS.gene074629:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAAATCTCA+AGG | + | 10784:5947-5966 | MS.gene074629:intergenic | 10.0% |
| !! | TATTCTAATAAATTAGATAT+TGG | - | 10784:5278-5297 | MS.gene074629:CDS | 10.0% |
| !!! | AGATTTTTTTTTTTTTTTGA+GGG | - | 10784:5949-5968 | MS.gene074629:intron | 10.0% |
| !!! | ATTAGAATATTTTTATTTCA+AGG | + | 10784:5267-5286 | MS.gene074629:intergenic | 10.0% |
| !! | AAAATGAAATCTGAAAAAAA+GGG | + | 10784:2415-2434 | MS.gene074629:intergenic | 15.0% |
| !! | AAATAAAAATAGATATGGTT+CGG | - | 10784:4784-4803 | MS.gene074629:CDS | 15.0% |
| !! | AAATCATATATAAATAGTGA+TGG | + | 10784:3494-3513 | MS.gene074629:intergenic | 15.0% |
| !! | AATGTCTTAAATTAAATCTT+TGG | + | 10784:3466-3485 | MS.gene074629:intergenic | 15.0% |
| !! | ATGTCTTAAATTAAATCTTT+GGG | + | 10784:3465-3484 | MS.gene074629:intergenic | 15.0% |
| !! | GAAATAAAATGTATACATTT+AGG | + | 10784:6375-6394 | MS.gene074629:intergenic | 15.0% |
| !! | TAACCAAATAAAAATAGATA+TGG | - | 10784:4779-4798 | MS.gene074629:CDS | 15.0% |
| !! | TTCTTATATTCTATATTAGA+AGG | + | 10784:3218-3237 | MS.gene074629:intergenic | 15.0% |
| !!! | AATTTTAAAAAATGAAGGTA+CGG | - | 10784:4575-4594 | MS.gene074629:intron | 15.0% |
| !!! | ATTTTTTTTTTTTTTTGAGG+GGG | - | 10784:5951-5970 | MS.gene074629:intron | 15.0% |
| !!! | GAGATTTTTTTTTTTTTTTG+AGG | - | 10784:5948-5967 | MS.gene074629:intron | 15.0% |
| !!! | GATTTTTTTTTTTTTTTGAG+GGG | - | 10784:5950-5969 | MS.gene074629:intron | 15.0% |
| !! | AAAGAATGAACATAAAATGA+AGG | + | 10784:5239-5258 | MS.gene074629:intergenic | 20.0% |
| !! | AAATATAAATGCAATTTGAG+TGG | - | 10784:4421-4440 | MS.gene074629:intron | 20.0% |
| !! | AATATAAATGCAATTTGAGT+GGG | - | 10784:4422-4441 | MS.gene074629:intron | 20.0% |
| !! | AATCAAAACTAAAGTGATTA+TGG | + | 10784:5042-5061 | MS.gene074629:intergenic | 20.0% |
| !! | ACAATACAAATTTCAAAAAC+AGG | + | 10784:3659-3678 | MS.gene074629:intergenic | 20.0% |
| !! | ATATCTTTGAGTGTTAATAA+TGG | - | 10784:2608-2627 | MS.gene074629:intron | 20.0% |
| !! | ATCAAAACTAAAGTGATTAT+GGG | + | 10784:5041-5060 | MS.gene074629:intergenic | 20.0% |
| !! | ATTAATGAATCATGAATGTA+AGG | - | 10784:5133-5152 | MS.gene074629:CDS | 20.0% |
| !! | ATTGAAATAAACATGATTAG+AGG | + | 10784:3731-3750 | MS.gene074629:intergenic | 20.0% |
| !! | GAAAATGAAATCTGAAAAAA+AGG | + | 10784:2416-2435 | MS.gene074629:intergenic | 20.0% |
| !! | GTAATTGTAATTATAATTGC+AGG | - | 10784:2823-2842 | MS.gene074629:intron | 20.0% |
| !! | TATCTTTGAGTGTTAATAAT+GGG | - | 10784:2609-2628 | MS.gene074629:intron | 20.0% |
| !! | TTCAATATACGTTATAATAC+AGG | - | 10784:3745-3764 | MS.gene074629:intron | 20.0% |
| !!! | AACTAAAAAAAGGCTAATTT+TGG | + | 10784:2973-2992 | MS.gene074629:intergenic | 20.0% |
| !!! | ATTTTAAAAAATGAAGGTAC+GGG | - | 10784:4576-4595 | MS.gene074629:intron | 20.0% |
| !!! | CGTCAAATTTTAAAAAATGA+AGG | - | 10784:4570-4589 | MS.gene074629:intron | 20.0% |
| !!! | GAACCATATCTATTTTTATT+TGG | + | 10784:4785-4804 | MS.gene074629:intergenic | 20.0% |
| ! | AATGTATTCAAGAATGTAGA+CGG | + | 10784:6031-6050 | MS.gene074629:intergenic | 25.0% |
| ! | ACATAGCTGAAAAAATAAAG+AGG | + | 10784:4176-4195 | MS.gene074629:intergenic | 25.0% |
| ! | AGGAAATTAAACAAACCTAT+TGG | + | 10784:4068-4087 | MS.gene074629:intergenic | 25.0% |
| ! | AGTTTCTGCTTTATATATTG+TGG | - | 10784:4092-4111 | MS.gene074629:intron | 25.0% |
| ! | ATAATTTGGATAGCTTCAAA+AGG | + | 10784:2667-2686 | MS.gene074629:intergenic | 25.0% |
| ! | ATATAAAGCAGAAACTAAAG+AGG | + | 10784:4088-4107 | MS.gene074629:intergenic | 25.0% |
| ! | ATGATGTGTTTGTTTAAATG+GGG | + | 10784:4906-4925 | MS.gene074629:intergenic | 25.0% |
| ! | ATGGTGTTTGTGAATATATT+TGG | - | 10784:4477-4496 | MS.gene074629:intron | 25.0% |
| ! | ATTGCTAACGATATTGAATA+AGG | + | 10784:3160-3179 | MS.gene074629:intergenic | 25.0% |
| ! | GATGATGTGTTTGTTTAAAT+GGG | + | 10784:4907-4926 | MS.gene074629:intergenic | 25.0% |
| ! | GGAAATTAAACAAACCTATT+GGG | + | 10784:4067-4086 | MS.gene074629:intergenic | 25.0% |
| ! | TGCTATATTAAAACTACACA+TGG | + | 10784:3398-3417 | MS.gene074629:intergenic | 25.0% |
| !! | CATCAAAAGCAAGATAATTT+TGG | - | 10784:4708-4727 | MS.gene074629:intron | 25.0% |
| !! | CTTTTGATGAAAATAGTAGA+GGG | + | 10784:4697-4716 | MS.gene074629:intergenic | 25.0% |
| !! | TGATGATGTGTTTGTTTAAA+TGG | + | 10784:4908-4927 | MS.gene074629:intergenic | 25.0% |
| !! | TTTTGATGAAAATAGTAGAG+GGG | + | 10784:4696-4715 | MS.gene074629:intergenic | 25.0% |
| !!! | AATTAGCCTTTTTTTAGTTG+TGG | - | 10784:2974-2993 | MS.gene074629:intron | 25.0% |
| !!! | GACTTTATTTGCTGTTTATA+TGG | - | 10784:4239-4258 | MS.gene074629:intron | 25.0% |
| !!! | TAAACATGTGTTGATTTTCT+TGG | - | 10784:6313-6332 | MS.gene074629:intron | 25.0% |
| !!! | TTATTTTTCTTTCCATTTGC+AGG | - | 10784:3032-3051 | MS.gene074629:intron | 25.0% |
| !!! | TTCATTACGTTTTGAATAAG+TGG | + | 10784:5189-5208 | MS.gene074629:intergenic | 25.0% |
| AAAAAATGAGAGAGACATGA+AGG | - | 10784:3841-3860 | MS.gene074629:intron | 30.0% | |
| AAAATACCTTTCCAAGACAA+AGG | + | 10784:5915-5934 | MS.gene074629:intergenic | 30.0% | |
| AAAGATACCACTCATAGATA+CGG | - | 10784:2709-2728 | MS.gene074629:intron | 30.0% | |
| AAATTTGACGTATTACGTAC+AGG | + | 10784:4560-4579 | MS.gene074629:intergenic | 30.0% | |
| AACAGAAAATCTTAGGTTTC+GGG | - | 10784:4343-4362 | MS.gene074629:intron | 30.0% | |
| AATGAATCATGAATGTAAGG+CGG | - | 10784:5136-5155 | MS.gene074629:CDS | 30.0% | |
| ACTACTTATTGAACAGTTGA+TGG | - | 10784:5837-5856 | MS.gene074629:intron | 30.0% | |
| ATATCTGAGGAATTGTGTAT+TGG | - | 10784:2523-2542 | MS.gene074629:intron | 30.0% | |
| ATCAACTGTTCAATAAGTAG+TGG | + | 10784:5838-5857 | MS.gene074629:intergenic | 30.0% | |
| ATCACATCTGATATAAACTG+GGG | + | 10784:5811-5830 | MS.gene074629:intergenic | 30.0% | |
| ATGTATTCAAGAATGTAGAC+GGG | + | 10784:6030-6049 | MS.gene074629:intergenic | 30.0% | |
| CAACAGAAAATCTTAGGTTT+CGG | - | 10784:4342-4361 | MS.gene074629:intron | 30.0% | |
| CAAGTGTCTAACAGATAATT+GGG | + | 10784:5755-5774 | MS.gene074629:intergenic | 30.0% | |
| CAAGTTATAGATCGTAATGT+TGG | - | 10784:3893-3912 | MS.gene074629:intron | 30.0% | |
| CAGAGTGATTTACTTTAGAT+TGG | - | 10784:6087-6106 | MS.gene074629:intron | 30.0% | |
| CATCACATCTGATATAAACT+GGG | + | 10784:5812-5831 | MS.gene074629:intergenic | 30.0% | |
| GATAGAGTTATTGTTTACGA+GGG | - | 10784:6755-6774 | MS.gene074629:CDS | 30.0% | |
| GGAATTAATATCTTCTTGTC+CGG | - | 10784:4311-4330 | MS.gene074629:intron | 30.0% | |
| GTCTATCCACAACTAAAAAA+AGG | + | 10784:2983-3002 | MS.gene074629:intergenic | 30.0% | |
| TAAAAGCTTAGATGATGTTC+AGG | - | 10784:5077-5096 | MS.gene074629:CDS | 30.0% | |
| TAACAGATAATTGGGACTTT+GGG | + | 10784:5747-5766 | MS.gene074629:intergenic | 30.0% | |
| TAATGTTAGACTGTTGTGTT+GGG | + | 10784:3588-3607 | MS.gene074629:intergenic | 30.0% | |
| TAATTATAATTGCAGGTTGC+CGG | - | 10784:2830-2849 | MS.gene074629:intron | 30.0% | |
| TATAGGAAGATTATGTGTTG+AGG | - | 10784:2474-2493 | MS.gene074629:CDS | 30.0% | |
| TATCTCCTACATCTCATTTA+CGG | - | 10784:4398-4417 | MS.gene074629:intron | 30.0% | |
| TATTTCCGTAAATGAGATGT+AGG | + | 10784:4406-4425 | MS.gene074629:intergenic | 30.0% | |
| TCATCACATCTGATATAAAC+TGG | + | 10784:5813-5832 | MS.gene074629:intergenic | 30.0% | |
| TCTGAATATCTATGATGCAT+AGG | - | 10784:4502-4521 | MS.gene074629:intron | 30.0% | |
| TGATAGAGTTATTGTTTACG+AGG | - | 10784:6754-6773 | MS.gene074629:CDS | 30.0% | |
| TGATGTGTTTGTTTAAATGG+GGG | + | 10784:4905-4924 | MS.gene074629:intergenic | 30.0% | |
| TTAATGTTAGACTGTTGTGT+TGG | + | 10784:3589-3608 | MS.gene074629:intergenic | 30.0% | |
| TTGCTATAGTAGAACAGTAA+TGG | + | 10784:6425-6444 | MS.gene074629:intergenic | 30.0% | |
| TTGTTCCAACAGAAAATCTT+AGG | - | 10784:4336-4355 | MS.gene074629:intron | 30.0% | |
| ! | ACATGTATATCTCAGCATTT+TGG | + | 10784:3970-3989 | MS.gene074629:intergenic | 30.0% |
| ! | CTAATACTTTTAAGCTACAC+AGG | - | 10784:2734-2753 | MS.gene074629:intron | 30.0% |
| ! | GCTTTTGATGAAAATAGTAG+AGG | + | 10784:4698-4717 | MS.gene074629:intergenic | 30.0% |
| !! | ATATATTCAGCTTTGAAGCA+TGG | + | 10784:4870-4889 | MS.gene074629:intergenic | 30.0% |
| !! | ATTGTTTGAAAGCGTTATGT+TGG | - | 10784:3237-3256 | MS.gene074629:CDS | 30.0% |
| !! | CTGTGTAGCTTAAAAGTATT+AGG | + | 10784:2736-2755 | MS.gene074629:intergenic | 30.0% |
| !! | TATATTCAGCTTTGAAGCAT+GGG | + | 10784:4869-4888 | MS.gene074629:intergenic | 30.0% |
| !!! | ACCTTTTACTTTTAAAGCGA+AGG | + | 10784:3428-3447 | MS.gene074629:intergenic | 30.0% |
| !!! | TCATGTCTCTCTCATTTTTT+TGG | + | 10784:3841-3860 | MS.gene074629:intergenic | 30.0% |
| !!! | TGTTGATTTTCTTGGAAACT+TGG | - | 10784:6321-6340 | MS.gene074629:intron | 30.0% |
| !!! | TTTTTTTTGCCTTTTCCTTC+TGG | - | 10784:3705-3724 | MS.gene074629:CDS | 30.0% |
| AAACACACAACAAAGCTAAG+TGG | + | 10784:6499-6518 | MS.gene074629:intergenic | 35.0% | |
| ATATCACTGTGAACTGTCAT+TGG | - | 10784:4115-4134 | MS.gene074629:intron | 35.0% | |
| ATGAATCATGAATGTAAGGC+GGG | - | 10784:5137-5156 | MS.gene074629:CDS | 35.0% | |
| CAACACTGAGATTGATTGAA+TGG | - | 10784:4458-4477 | MS.gene074629:intron | 35.0% | |
| CAATTCAGATCCTCGAAAAT+GGG | + | 10784:3085-3104 | MS.gene074629:intergenic | 35.0% | |
| CATCACAAATAGATGTCTAC+AGG | + | 10784:6448-6467 | MS.gene074629:intergenic | 35.0% | |
| CTAACAGATAATTGGGACTT+TGG | + | 10784:5748-5767 | MS.gene074629:intergenic | 35.0% | |
| GAAGATTGCTTACATATCTG+AGG | - | 10784:2510-2529 | MS.gene074629:CDS | 35.0% | |
| GCAAGTGTCTAACAGATAAT+TGG | + | 10784:5756-5775 | MS.gene074629:intergenic | 35.0% | |
| GCTACGTTTAATTCTAGTGA+AGG | + | 10784:3534-3553 | MS.gene074629:intergenic | 35.0% | |
| GTATCTTTGTCCAAATCCTT+CGG | + | 10784:2697-2716 | MS.gene074629:intergenic | 35.0% | |
| TATCTATGATGCATAGGTAC+CGG | - | 10784:4508-4527 | MS.gene074629:intron | 35.0% | |
| TCACAGATTATTGTGATGCT+GGG | - | 10784:5515-5534 | MS.gene074629:intron | 35.0% | |
| TCACATCTGATATAAACTGG+GGG | + | 10784:5810-5829 | MS.gene074629:intergenic | 35.0% | |
| TCCAACACATTCATTGTGTT+GGG | - | 10784:3330-3349 | MS.gene074629:CDS | 35.0% | |
| TTCACAGATTATTGTGATGC+TGG | - | 10784:5514-5533 | MS.gene074629:intron | 35.0% | |
| TTGAAACCTGACACTATAGA+AGG | - | 10784:5664-5683 | MS.gene074629:intron | 35.0% | |
| TTGTATGATACGTTGAACTC+AGG | + | 10784:5709-5728 | MS.gene074629:intergenic | 35.0% | |
| TTGTGGATAGACATGATTTG+AGG | - | 10784:2991-3010 | MS.gene074629:intron | 35.0% | |
| TTTGCAGTACAGTCAATTGA+AGG | + | 10784:6785-6804 | MS.gene074629:intergenic | 35.0% | |
| ! | ACATTCTTGACGACACTTTT+TGG | + | 10784:2348-2367 | MS.gene074629:intergenic | 35.0% |
| ! | ACTGCTGTTTATTTCCTCTA+TGG | - | 10784:6185-6204 | MS.gene074629:CDS | 35.0% |
| ! | ATTTTCTGTTGGAACAAAGC+CGG | + | 10784:4333-4352 | MS.gene074629:intergenic | 35.0% |
| ! | CATTCTAGAGGATGATTTGA+AGG | - | 10784:3122-3141 | MS.gene074629:intron | 35.0% |
| ! | CGAAACCTAAGATTTTCTGT+TGG | + | 10784:4344-4363 | MS.gene074629:intergenic | 35.0% |
| ! | GTATATCTCAGCATTTTGGA+TGG | + | 10784:3966-3985 | MS.gene074629:intergenic | 35.0% |
| ! | TTCACCTTCTCCTTTTATTC+AGG | - | 10784:5633-5652 | MS.gene074629:intron | 35.0% |
| !! | CATTCTTGACGACACTTTTT+GGG | + | 10784:2347-2366 | MS.gene074629:intergenic | 35.0% |
| !! | GAAATTTTGACCCATTTTCG+AGG | - | 10784:3072-3091 | MS.gene074629:intron | 35.0% |
| !! | GCCTTCGCTTTAAAAGTAAA+AGG | - | 10784:3424-3443 | MS.gene074629:CDS | 35.0% |
| !! | GTAATGTTGGTGATCTTTCA+GGG | - | 10784:3906-3925 | MS.gene074629:intron | 35.0% |
| !! | TAATGTTGGTGATCTTTCAG+GGG | - | 10784:3907-3926 | MS.gene074629:intron | 35.0% |
| !!! | AACTGTCATTGGTTTTTGTC+GGG | - | 10784:4126-4145 | MS.gene074629:intron | 35.0% |
| !!! | GAACTGTCATTGGTTTTTGT+CGG | - | 10784:4125-4144 | MS.gene074629:intron | 35.0% |
| AAAATTTCCTGCCAATCAGG+CGG | + | 10784:3060-3079 | MS.gene074629:intergenic | 40.0% | |
| AAACATGATTAGAGGCCAGA+AGG | + | 10784:3723-3742 | MS.gene074629:intergenic | 40.0% | |
| AAACCTGACACTATAGAAGG+TGG | - | 10784:5667-5686 | MS.gene074629:intron | 40.0% | |
| AACAAACCGGCCTGAATAAA+AGG | + | 10784:5646-5665 | MS.gene074629:intergenic | 40.0% | |
| AAGGTGCACAAGTAATCTCA+AGG | + | 10784:5978-5997 | MS.gene074629:intergenic | 40.0% | |
| ACATTCCAAAAGCTGTGCAA+GGG | - | 10784:3795-3814 | MS.gene074629:intron | 40.0% | |
| ACCCAACACAATGAATGTGT+TGG | + | 10784:3334-3353 | MS.gene074629:intergenic | 40.0% | |
| ACTACACATGGCATATCTCT+AGG | + | 10784:3386-3405 | MS.gene074629:intergenic | 40.0% | |
| AGAAAATCTTAGGTTTCGGG+AGG | - | 10784:4346-4365 | MS.gene074629:intron | 40.0% | |
| AGCATAAGTTTGAGCTTCCT+CGG | + | 10784:5420-5439 | MS.gene074629:intergenic | 40.0% | |
| AGTGTCAGGTTTCAACAAAC+CGG | + | 10784:5659-5678 | MS.gene074629:intergenic | 40.0% | |
| ATCTCAAGTCTCAACCATAG+AGG | + | 10784:6202-6221 | MS.gene074629:intergenic | 40.0% | |
| ATGAGAGAGACATGAAGGAA+AGG | - | 10784:3846-3865 | MS.gene074629:intron | 40.0% | |
| ATTAGGACCGTATCTATGAG+TGG | + | 10784:2719-2738 | MS.gene074629:intergenic | 40.0% | |
| ATTCCTTCTCTGACTGAGAA+AGG | + | 10784:4296-4315 | MS.gene074629:intergenic | 40.0% | |
| CAACACAATGAATGTGTTGG+AGG | + | 10784:3331-3350 | MS.gene074629:intergenic | 40.0% | |
| CAAGAGGTTCAGAATCTTTC+TGG | - | 10784:5862-5881 | MS.gene074629:intron | 40.0% | |
| CAGAAAGATTCTGAACCTCT+TGG | + | 10784:5864-5883 | MS.gene074629:intergenic | 40.0% | |
| CCAAAACTCAAGGCAATTTC+AGG | - | 10784:5462-5481 | MS.gene074629:intron | 40.0% | |
| CCAAATTATCAACTTGCCGA+AGG | - | 10784:2678-2697 | MS.gene074629:intron | 40.0% | |
| CCTAGATACAACATCAGAGA+AGG | + | 10784:5373-5392 | MS.gene074629:intergenic | 40.0% | |
| CCTTCTCTGATGTTGTATCT+AGG | - | 10784:5370-5389 | MS.gene074629:intron | 40.0% | |
| CTCCAACACATTCATTGTGT+TGG | - | 10784:3329-3348 | MS.gene074629:CDS | 40.0% | |
| CTGAAAGAGCTAAATTACGC+TGG | + | 10784:6070-6089 | MS.gene074629:intergenic | 40.0% | |
| CTGTTTCACATCCAGATAAC+TGG | + | 10784:4005-4024 | MS.gene074629:intergenic | 40.0% | |
| GAAATCGTGCTCAACGATAA+AGG | + | 10784:6714-6733 | MS.gene074629:intergenic | 40.0% | |
| GAATACCAGCATACGAATGA+AGG | + | 10784:5564-5583 | MS.gene074629:intergenic | 40.0% | |
| GAGGAATTGTGTATTGGATG+CGG | - | 10784:2529-2548 | MS.gene074629:intron | 40.0% | |
| GCAATTCAGATCCTCGAAAA+TGG | + | 10784:3086-3105 | MS.gene074629:intergenic | 40.0% | |
| GGAAAATTGAAGCCCAACTT+GGG | - | 10784:2930-2949 | MS.gene074629:intron | 40.0% | |
| GGAGGTTTCTCTTACTTTCA+AGG | - | 10784:4364-4383 | MS.gene074629:intron | 40.0% | |
| GTCAAAATTTCCTGCCAATC+AGG | + | 10784:3063-3082 | MS.gene074629:intergenic | 40.0% | |
| GTTATCTGGATGTGAAACAG+AGG | - | 10784:4005-4024 | MS.gene074629:intron | 40.0% | |
| GTTATGCCTTTGTCTTGGAA+AGG | - | 10784:5906-5925 | MS.gene074629:intron | 40.0% | |
| TAGACGGGAAAGAAAAGACA+GGG | + | 10784:6015-6034 | MS.gene074629:intergenic | 40.0% | |
| TAGAGAAGCCAAATCTGTGT+TGG | - | 10784:6238-6257 | MS.gene074629:CDS | 40.0% | |
| TATCAACTTGCCGAAGGATT+TGG | - | 10784:2684-2703 | MS.gene074629:intron | 40.0% | |
| TCATTGTGTTGGGTGTGAAA+GGG | - | 10784:3340-3359 | MS.gene074629:CDS | 40.0% | |
| TCGGAATCAAGATATGCACT+TGG | + | 10784:6632-6651 | MS.gene074629:intergenic | 40.0% | |
| TCTATCAGATAGATGTCTGC+AGG | + | 10784:6605-6624 | MS.gene074629:intergenic | 40.0% | |
| TGATGAACCTTCCAGTTATC+TGG | - | 10784:3991-4010 | MS.gene074629:intron | 40.0% | |
| TGGAAAATTGAAGCCCAACT+TGG | - | 10784:2929-2948 | MS.gene074629:intron | 40.0% | |
| TGGTTGGGACAAATGGAATT+GGG | - | 10784:2880-2899 | MS.gene074629:intron | 40.0% | |
| TTACTTCACTCGCATTCTAG+AGG | - | 10784:3110-3129 | MS.gene074629:intron | 40.0% | |
| TTCACATCCAGATAACTGGA+AGG | + | 10784:4001-4020 | MS.gene074629:intergenic | 40.0% | |
| TTCAGGCTTCATGTAGTTGA+AGG | - | 10784:5479-5498 | MS.gene074629:intron | 40.0% | |
| TTCATTGTGTTGGGTGTGAA+AGG | - | 10784:3339-3358 | MS.gene074629:CDS | 40.0% | |
| TTGCTGCAAAAGTCATCAAG+AGG | - | 10784:6663-6682 | MS.gene074629:intron | 40.0% | |
| TTGGTTGGGACAAATGGAAT+TGG | - | 10784:2879-2898 | MS.gene074629:intron | 40.0% | |
| TTTGGTTATTGCGTCGTAGT+TGG | + | 10784:4767-4786 | MS.gene074629:intergenic | 40.0% | |
| ! | AGATTTGGCTTCTCTAGTGT+GGG | + | 10784:6234-6253 | MS.gene074629:intergenic | 40.0% |
| ! | CCTGAAATTGCCTTGAGTTT+TGG | + | 10784:5465-5484 | MS.gene074629:intergenic | 40.0% |
| ! | GACTTTGGGCTAATTTTCTG+AGG | + | 10784:5733-5752 | MS.gene074629:intergenic | 40.0% |
| ! | TGACGTTGAAGCAAGCTTTT+TGG | - | 10784:6466-6485 | MS.gene074629:intron | 40.0% |
| ! | TGCTGTTTATATGGCAAACC+TGG | - | 10784:4248-4267 | MS.gene074629:intron | 40.0% |
| !! | AATGTTGGTGATCTTTCAGG+GGG | - | 10784:3908-3927 | MS.gene074629:intron | 40.0% |
| !! | ATTGCCTTGAGTTTTGGTCA+TGG | + | 10784:5459-5478 | MS.gene074629:intergenic | 40.0% |
| !! | CAAATCTGTGTTGGTGATGT+CGG | - | 10784:6247-6266 | MS.gene074629:CDS | 40.0% |
| !! | CCTTCGGCAAGTTGATAATT+TGG | + | 10784:2681-2700 | MS.gene074629:intergenic | 40.0% |
| !! | CGTAATGTTGGTGATCTTTC+AGG | - | 10784:3905-3924 | MS.gene074629:intron | 40.0% |
| !! | CTTGAGTTTTGGTCATGGTT+GGG | + | 10784:5454-5473 | MS.gene074629:intergenic | 40.0% |
| AAAAGCTGTGCAAGGGAATG+TGG | - | 10784:3802-3821 | MS.gene074629:intron | 45.0% | |
| AAAGCTGTGCAAGGGAATGT+GGG | - | 10784:3803-3822 | MS.gene074629:intron | 45.0% | |
| AAGCATGGGTACTCCAAACA+TGG | + | 10784:4855-4874 | MS.gene074629:intergenic | 45.0% | |
| AAGCTACACAGGTTTGTGTG+CGG | - | 10784:2745-2764 | MS.gene074629:intron | 45.0% | |
| AAGTTGTTCGGTCATTGCTC+AGG | - | 10784:4041-4060 | MS.gene074629:intron | 45.0% | |
| ACTGTGAAACGACCCAAGTT+GGG | + | 10784:2945-2964 | MS.gene074629:intergenic | 45.0% | |
| ATCCCAGTCAGCAATGATTG+TGG | + | 10784:6812-6831 | MS.gene074629:intergenic | 45.0% | |
| ATTGTGATGCTGGGTGAGAA+TGG | - | 10784:5524-5543 | MS.gene074629:intron | 45.0% | |
| CACATTCCAAAAGCTGTGCA+AGG | - | 10784:3794-3813 | MS.gene074629:intron | 45.0% | |
| CAGGGCAGACACAATAACTA+AGG | + | 10784:5997-6016 | MS.gene074629:intergenic | 45.0% | |
| CATTGTGTTGGGTGTGAAAG+GGG | - | 10784:3341-3360 | MS.gene074629:CDS | 45.0% | |
| CCAACCATGACCAAAACTCA+AGG | - | 10784:5452-5471 | MS.gene074629:intron | 45.0% | |
| CGACATCACCAACACAGATT+TGG | + | 10784:6249-6268 | MS.gene074629:intergenic | 45.0% | |
| CGTTGAGCACGATTTCATCA+TGG | - | 10784:6718-6737 | MS.gene074629:intron | 45.0% | |
| CTTCCTTTCTCAGTCAGAGA+AGG | - | 10784:4290-4309 | MS.gene074629:intron | 45.0% | |
| GAGCAATGACCGAACAACTT+GGG | + | 10784:4041-4060 | MS.gene074629:intergenic | 45.0% | |
| GAGGTTCAGAATCTTTCTGG+TGG | - | 10784:5865-5884 | MS.gene074629:intron | 45.0% | |
| GATCCACCTTCTATAGTGTC+AGG | + | 10784:5673-5692 | MS.gene074629:intergenic | 45.0% | |
| GATTAGAGGCCAGAAGGAAA+AGG | + | 10784:3717-3736 | MS.gene074629:intergenic | 45.0% | |
| GGAATGTGGTCAACATACTG+AGG | + | 10784:3782-3801 | MS.gene074629:intergenic | 45.0% | |
| GTAGACGGGAAAGAAAAGAC+AGG | + | 10784:6016-6035 | MS.gene074629:intergenic | 45.0% | |
| GTTACAACACCATATGCACC+AGG | + | 10784:4269-4288 | MS.gene074629:intergenic | 45.0% | |
| GTTGCGTTATGCCTTTGTCT+TGG | - | 10784:5901-5920 | MS.gene074629:intron | 45.0% | |
| TACCGGTACTTCTCCATGTT+TGG | - | 10784:4839-4858 | MS.gene074629:CDS | 45.0% | |
| TACTGTGAAACGACCCAAGT+TGG | + | 10784:2946-2965 | MS.gene074629:intergenic | 45.0% | |
| TATGGCAAACCTGGTGCATA+TGG | - | 10784:4257-4276 | MS.gene074629:intron | 45.0% | |
| TGAAAGCTGCCCAAGTTGTT+CGG | - | 10784:4029-4048 | MS.gene074629:intron | 45.0% | |
| TGAGCAATGACCGAACAACT+TGG | + | 10784:4042-4061 | MS.gene074629:intergenic | 45.0% | |
| TGCAGCAACAATACGCTGTT+CGG | + | 10784:6651-6670 | MS.gene074629:intergenic | 45.0% | |
| TGGAATTTCCGCCTTCTTTG+TGG | - | 10784:3257-3276 | MS.gene074629:CDS | 45.0% | |
| TGGATGCGGTATCTGTGTTA+AGG | - | 10784:2543-2562 | MS.gene074629:intron | 45.0% | |
| TGTCCACAATCATTGCTGAC+TGG | - | 10784:6806-6825 | MS.gene074629:CDS | 45.0% | |
| TTGGTGCAGCAAAAACGTAC+AGG | + | 10784:4748-4767 | MS.gene074629:intergenic | 45.0% | |
| TTGTGATGCTGGGTGAGAAT+GGG | - | 10784:5525-5544 | MS.gene074629:intron | 45.0% | |
| ! | AAATGAAGGTACGGGTACGT+TGG | - | 10784:4584-4603 | MS.gene074629:intron | 45.0% |
| ! | ACATTCCCTTGCACAGCTTT+TGG | + | 10784:3803-3822 | MS.gene074629:intergenic | 45.0% |
| ! | AGGGCTGTGATGTTACTTAC+CGG | + | 10784:2396-2415 | MS.gene074629:intergenic | 45.0% |
| ! | CAGATTTGGCTTCTCTAGTG+TGG | + | 10784:6235-6254 | MS.gene074629:intergenic | 45.0% |
| ! | CCTTCTCCTTTTATTCAGGC+CGG | - | 10784:5637-5656 | MS.gene074629:intron | 45.0% |
| ! | CGAGCACGATCTTAGTGTTT+TGG | - | 10784:4205-4224 | MS.gene074629:intron | 45.0% |
| ! | CTCCAAACATGGAGAAGTAC+CGG | + | 10784:4844-4863 | MS.gene074629:intergenic | 45.0% |
| ! | GGCATATCTCTAGGAAGTGT+GGG | + | 10784:3377-3396 | MS.gene074629:intergenic | 45.0% |
| ! | GTCCACAATCATTGCTGACT+GGG | - | 10784:6807-6826 | MS.gene074629:CDS | 45.0% |
| ! | GTCGACTGCACTTAAGGTTT+TGG | - | 10784:2905-2924 | MS.gene074629:intron | 45.0% |
| ! | TGGCATATCTCTAGGAAGTG+TGG | + | 10784:3378-3397 | MS.gene074629:intergenic | 45.0% |
| !! | ACTGCACTTAAGGTTTTGGC+TGG | - | 10784:2909-2928 | MS.gene074629:intron | 45.0% |
| !! | ATGATGCATAGGTACCGGTA+CGG | - | 10784:4513-4532 | MS.gene074629:intron | 45.0% |
| !! | CCTTGAGTTTTGGTCATGGT+TGG | + | 10784:5455-5474 | MS.gene074629:intergenic | 45.0% |
| !! | CTTGGTTTGGTTGGGACAAA+TGG | - | 10784:2873-2892 | MS.gene074629:intron | 45.0% |
| !! | TGAACAGTTGATGGACCAAG+AGG | - | 10784:5846-5865 | MS.gene074629:intron | 45.0% |
| !!! | CTTGCACAGCTTTTGGAATG+TGG | + | 10784:3796-3815 | MS.gene074629:intergenic | 45.0% |
| !! | AAAAAATTAACAAAAATATA+AGG | + | 10784:5003-5022 | MS.gene074629:intergenic | 5.0% |
| AAGCTGTGCAAGGGAATGTG+GGG | - | 10784:3804-3823 | MS.gene074629:intron | 50.0% | |
| AATCAGGCGGTTCCTGCAAA+TGG | + | 10784:3047-3066 | MS.gene074629:intergenic | 50.0% | |
| AGATGTCTGCAGGCTGTTGT+AGG | + | 10784:6595-6614 | MS.gene074629:intergenic | 50.0% | |
| AGCTGCCTAATTGCGGCATT+TGG | - | 10784:3289-3308 | MS.gene074629:CDS | 50.0% | |
| AGTTGTCCTGTCGTCAGAAC+CGG | - | 10784:2374-2393 | MS.gene074629:CDS | 50.0% | |
| ATGCCGCAATTAGGCAGCTA+AGG | + | 10784:3288-3307 | MS.gene074629:intergenic | 50.0% | |
| ATTTGCAGGAACCGCCTGAT+TGG | - | 10784:3046-3065 | MS.gene074629:intron | 50.0% | |
| CAACCGCAATGGCAAACCTT+TGG | + | 10784:3940-3959 | MS.gene074629:intergenic | 50.0% | |
| CCGGCCTGAATAAAAGGAGA+AGG | + | 10784:5640-5659 | MS.gene074629:intergenic | 50.0% | |
| CTAAGGGCGAACCACAAAGA+AGG | + | 10784:3271-3290 | MS.gene074629:intergenic | 50.0% | |
| GAATGTAAGGCGGGTCTACA+GGG | - | 10784:5146-5165 | MS.gene074629:CDS | 50.0% | |
| GACGACCTTCATTCGTATGC+TGG | - | 10784:5556-5575 | MS.gene074629:intron | 50.0% | |
| GCAACCCAAATGCCGCAATT+AGG | + | 10784:3297-3316 | MS.gene074629:intergenic | 50.0% | |
| GCATCTGTCGTTGCTAACGA+TGG | + | 10784:2321-2340 | MS.gene074629:intergenic | 50.0% | |
| GCTCCAAAGGTTTGCCATTG+CGG | - | 10784:3934-3953 | MS.gene074629:intron | 50.0% | |
| GCTGCCTAATTGCGGCATTT+GGG | - | 10784:3290-3309 | MS.gene074629:CDS | 50.0% | |
| TGAATGTAAGGCGGGTCTAC+AGG | - | 10784:5145-5164 | MS.gene074629:CDS | 50.0% | |
| TGCCGCAATTAGGCAGCTAA+GGG | + | 10784:3287-3306 | MS.gene074629:intergenic | 50.0% | |
| TGGGAAGTCGACTGCACTTA+AGG | - | 10784:2899-2918 | MS.gene074629:intron | 50.0% | |
| TGTGTTGGAGGCTGCAATGA+AGG | + | 10784:3319-3338 | MS.gene074629:intergenic | 50.0% | |
| TTGGATGGCAACAACCGCAA+TGG | + | 10784:3951-3970 | MS.gene074629:intergenic | 50.0% | |
| !! | ACATGGAGAAGTACCGGTAC+CGG | + | 10784:4838-4857 | MS.gene074629:intergenic | 50.0% |
| !! | GGCAAGTGCTTGGTTTGGTT+GGG | - | 10784:2865-2884 | MS.gene074629:intron | 50.0% |
| !! | TACTTACCGGTTCTGACGAC+AGG | + | 10784:2383-2402 | MS.gene074629:intergenic | 50.0% |
| ACAGGTACCCGTACCCATAC+CGG | + | 10784:4542-4561 | MS.gene074629:intergenic | 55.0% | |
| ACCAAACCAAGCACTTGCCC+CGG | + | 10784:2864-2883 | MS.gene074629:intergenic | 55.0% | |
| ACGAGTACCATACGCGTACC+CGG | - | 10784:4816-4835 | MS.gene074629:CDS | 55.0% | |
| AGGGCGAACCACAAAGAAGG+CGG | + | 10784:3268-3287 | MS.gene074629:intergenic | 55.0% | |
| ATGCTGGGTGAGAATGGGAC+AGG | - | 10784:5530-5549 | MS.gene074629:intron | 55.0% | |
| CGCCCTTAGCTGCCTAATTG+CGG | - | 10784:3282-3301 | MS.gene074629:CDS | 55.0% | |
| CTAGGTTGCAGAGACTCCAC+AGG | - | 10784:5388-5407 | MS.gene074629:intron | 55.0% | |
| GGGGGTGAGTGTATGCATCA+CGG | + | 10784:5792-5811 | MS.gene074629:intergenic | 55.0% | |
| GGTCATTGCTCAGGCCCAAT+AGG | - | 10784:4050-4069 | MS.gene074629:intron | 55.0% | |
| TACGGTACCCGGTATGGGTA+CGG | - | 10784:4531-4550 | MS.gene074629:intron | 55.0% | |
| TGTGTTGGGTGTGAAAGGGG+TGG | - | 10784:3344-3363 | MS.gene074629:CDS | 55.0% | |
| TTTCAGGGGGTGAGCTCCAA+AGG | - | 10784:3921-3940 | MS.gene074629:intron | 55.0% | |
| !! | ATAGGTACCGGTACGGTACC+CGG | - | 10784:4520-4539 | MS.gene074629:intron | 55.0% |
| !! | CATGGAGAAGTACCGGTACC+GGG | + | 10784:4837-4856 | MS.gene074629:intergenic | 55.0% |
| !! | GGGCAAGTGCTTGGTTTGGT+TGG | - | 10784:2864-2883 | MS.gene074629:intron | 55.0% |
| ACCATACGCGTACCCGGTAC+CGG | - | 10784:4822-4841 | MS.gene074629:CDS | 60.0% | |
| ACCGGTACGGTACCCGGTAT+GGG | - | 10784:4526-4545 | MS.gene074629:intron | 60.0% | |
| ACGGTACCCGGTATGGGTAC+GGG | - | 10784:4532-4551 | MS.gene074629:intron | 60.0% | |
| CAGGTACCCGTACCCATACC+GGG | + | 10784:4541-4560 | MS.gene074629:intergenic | 60.0% | |
| GACTCCACAGGAAACTGCCG+AGG | - | 10784:5400-5419 | MS.gene074629:intron | 60.0% | |
| GCTTCCTCGGCAGTTTCCTG+TGG | + | 10784:5407-5426 | MS.gene074629:intergenic | 60.0% | |
| GGCGGGTCTACAGGGTAGTA+AGG | - | 10784:5154-5173 | MS.gene074629:CDS | 60.0% | |
| TACCGGTACGGTACCCGGTA+TGG | - | 10784:4525-4544 | MS.gene074629:intron | 60.0% | |
| TGTGCAAGGGAATGTGGGGC+AGG | - | 10784:3808-3827 | MS.gene074629:intron | 60.0% | |
| ! | ACCCATACCGGGTACCGTAC+CGG | + | 10784:4530-4549 | MS.gene074629:intergenic | 60.0% |
| !! | ATTGCAGGTTGCCGGTTCCC+AGG | - | 10784:2838-2857 | MS.gene074629:intron | 60.0% |
| GCAGGAACCGCCTGATTGGC+AGG | - | 10784:3050-3069 | MS.gene074629:intron | 65.0% | |
| GCCGGGGCAAGTGCTTGGTT+TGG | - | 10784:2860-2879 | MS.gene074629:intron | 65.0% | |
| ! | ACCGGTACCGGGTACGCGTA+TGG | + | 10784:4826-4845 | MS.gene074629:intergenic | 65.0% |
| ACCAAGCACTTGCCCCGGCC+TGG | + | 10784:2859-2878 | MS.gene074629:intergenic | 70.0% | |
| ACTTGCCCCGGCCTGGGAAC+CGG | + | 10784:2852-2871 | MS.gene074629:intergenic | 70.0% | |
| CCAAGCACTTGCCCCGGCCT+GGG | + | 10784:2858-2877 | MS.gene074629:intergenic | 70.0% | |
| !! | AGGTTGCCGGTTCCCAGGCC+GGG | - | 10784:2843-2862 | MS.gene074629:intron | 70.0% |
| !! | CAGGTTGCCGGTTCCCAGGC+CGG | - | 10784:2842-2861 | MS.gene074629:intron | 70.0% |
| CCCAGGCCGGGGCAAGTGCT+TGG | - | 10784:2855-2874 | MS.gene074629:intron | 75.0% | |
| !! | GGTTGCCGGTTCCCAGGCCG+GGG | - | 10784:2844-2863 | MS.gene074629:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10784 | gene | 2285 | 6847 | 2285 | ID=MS.gene074629 |
| 10784 | mRNA | 2285 | 6847 | 2285 | ID=MS.gene074629.t1;Parent=MS.gene074629 |
| 10784 | exon | 6737 | 6847 | 6737 | ID=MS.gene074629.t1.exon1;Parent=MS.gene074629.t1 |
| 10784 | CDS | 6737 | 6847 | 6737 | ID=cds.MS.gene074629.t1;Parent=MS.gene074629.t1 |
| 10784 | exon | 6568 | 6653 | 6568 | ID=MS.gene074629.t1.exon2;Parent=MS.gene074629.t1 |
| 10784 | CDS | 6568 | 6653 | 6568 | ID=cds.MS.gene074629.t1;Parent=MS.gene074629.t1 |
| 10784 | exon | 6377 | 6474 | 6377 | ID=MS.gene074629.t1.exon3;Parent=MS.gene074629.t1 |
| 10784 | CDS | 6377 | 6474 | 6377 | ID=cds.MS.gene074629.t1;Parent=MS.gene074629.t1 |
| 10784 | exon | 6170 | 6287 | 6170 | ID=MS.gene074629.t1.exon4;Parent=MS.gene074629.t1 |
| 10784 | CDS | 6170 | 6287 | 6170 | ID=cds.MS.gene074629.t1;Parent=MS.gene074629.t1 |
| 10784 | exon | 5989 | 6078 | 5989 | ID=MS.gene074629.t1.exon5;Parent=MS.gene074629.t1 |
| 10784 | CDS | 5989 | 6078 | 5989 | ID=cds.MS.gene074629.t1;Parent=MS.gene074629.t1 |
| 10784 | exon | 5061 | 5365 | 5061 | ID=MS.gene074629.t1.exon6;Parent=MS.gene074629.t1 |
| 10784 | CDS | 5061 | 5365 | 5061 | ID=cds.MS.gene074629.t1;Parent=MS.gene074629.t1 |
| 10784 | exon | 4747 | 4942 | 4747 | ID=MS.gene074629.t1.exon7;Parent=MS.gene074629.t1 |
| 10784 | CDS | 4747 | 4942 | 4747 | ID=cds.MS.gene074629.t1;Parent=MS.gene074629.t1 |
| 10784 | exon | 3555 | 3740 | 3555 | ID=MS.gene074629.t1.exon8;Parent=MS.gene074629.t1 |
| 10784 | CDS | 3555 | 3740 | 3555 | ID=cds.MS.gene074629.t1;Parent=MS.gene074629.t1 |
| 10784 | exon | 3205 | 3477 | 3205 | ID=MS.gene074629.t1.exon9;Parent=MS.gene074629.t1 |
| 10784 | CDS | 3205 | 3477 | 3205 | ID=cds.MS.gene074629.t1;Parent=MS.gene074629.t1 |
| 10784 | exon | 2285 | 2530 | 2285 | ID=MS.gene074629.t1.exon10;Parent=MS.gene074629.t1 |
| 10784 | CDS | 2285 | 2530 | 2285 | ID=cds.MS.gene074629.t1;Parent=MS.gene074629.t1 |
| Gene Sequence |
| Protein sequence |
