Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07594.t1 | RHN80585.1 | 99.3 | 145 | 1 | 0 | 1 | 145 | 1 | 145 | 2.30E-77 | 300.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07594.t1 | Q9M8Y0 | 60.8 | 130 | 46 | 2 | 21 | 145 | 7 | 136 | 1.0e-36 | 156.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07594.t1 | G7I5N5 | 99.3 | 145 | 1 | 0 | 1 | 145 | 1 | 145 | 1.7e-77 | 300.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051826 | MS.gene07594 | 0.806936 | 6.46E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07594.t1 | MTR_1g079510 | 99.806 | 515 | 1 | 0 | 1 | 515 | 1 | 515 | 0.0 | 1065 |
MS.gene07594.t1 | MTR_1g079510 | 32.192 | 292 | 198 | 0 | 68 | 359 | 238 | 529 | 2.55e-38 | 151 |
MS.gene07594.t1 | MTR_1g059610 | 30.612 | 343 | 190 | 3 | 148 | 442 | 98 | 440 | 1.15e-40 | 159 |
MS.gene07594.t1 | MTR_1g059610 | 30.747 | 348 | 225 | 3 | 178 | 511 | 96 | 441 | 3.03e-38 | 151 |
MS.gene07594.t1 | MTR_1g045490 | 24.066 | 241 | 175 | 1 | 199 | 431 | 233 | 473 | 6.25e-12 | 68.9 |
MS.gene07594.t1 | MTR_1g045490 | 25.688 | 218 | 149 | 2 | 154 | 363 | 261 | 473 | 1.62e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07594.t1 | AT3G04240 | 78.400 | 500 | 103 | 2 | 21 | 515 | 7 | 506 | 0.0 | 820 |
MS.gene07594.t1 | AT3G04240 | 33.108 | 296 | 198 | 0 | 68 | 363 | 229 | 524 | 3.22e-41 | 160 |
MS.gene07594.t1 | AT3G04240 | 83.883 | 273 | 44 | 0 | 243 | 515 | 1 | 273 | 2.32e-165 | 489 |
MS.gene07594.t1 | AT3G04240 | 32.362 | 309 | 200 | 2 | 175 | 474 | 1 | 309 | 6.06e-42 | 162 |
MS.gene07594.t1 | AT3G04240 | 33.103 | 290 | 194 | 0 | 74 | 363 | 2 | 291 | 2.96e-41 | 159 |
MS.gene07594.t1 | AT3G11540 | 31.471 | 340 | 217 | 3 | 177 | 502 | 92 | 429 | 4.18e-40 | 157 |
MS.gene07594.t1 | AT3G11540 | 31.549 | 355 | 183 | 5 | 141 | 442 | 90 | 437 | 1.42e-39 | 155 |
MS.gene07594.t1 | AT3G11540 | 32.830 | 265 | 171 | 1 | 116 | 373 | 172 | 436 | 6.73e-35 | 141 |
MS.gene07594.t1 | AT3G11540 | 25.382 | 327 | 194 | 4 | 239 | 515 | 50 | 376 | 4.67e-19 | 92.0 |
MS.gene07594.t1 | AT3G11540 | 28.346 | 254 | 168 | 4 | 78 | 317 | 196 | 449 | 9.89e-19 | 90.9 |
MS.gene07594.t1 | AT3G11540 | 28.700 | 223 | 149 | 3 | 295 | 510 | 41 | 260 | 2.00e-15 | 80.5 |
MS.gene07594.t1 | AT3G11540 | 31.694 | 183 | 113 | 2 | 198 | 373 | 77 | 254 | 4.83e-16 | 82.4 |
MS.gene07594.t1 | AT3G11540 | 31.481 | 162 | 97 | 3 | 177 | 331 | 92 | 246 | 3.34e-13 | 73.2 |
MS.gene07594.t1 | AT3G11540 | 27.907 | 215 | 140 | 4 | 295 | 502 | 41 | 247 | 8.44e-13 | 72.0 |
MS.gene07594.t1 | AT3G11540 | 26.540 | 211 | 143 | 2 | 239 | 442 | 50 | 255 | 7.32e-11 | 65.9 |
MS.gene07594.t1 | AT3G11540 | 31.250 | 192 | 103 | 6 | 141 | 317 | 90 | 267 | 9.49e-11 | 65.5 |
MS.gene07594.t1 | AT2G32450 | 28.713 | 202 | 136 | 2 | 180 | 373 | 245 | 446 | 1.08e-14 | 78.2 |
MS.gene07594.t1 | AT2G32450 | 27.976 | 168 | 121 | 0 | 196 | 363 | 303 | 470 | 7.30e-13 | 72.0 |
MS.gene07594.t1 | AT2G32450 | 25.604 | 207 | 146 | 1 | 199 | 397 | 230 | 436 | 1.25e-12 | 71.2 |
MS.gene07594.t1 | AT1G05150 | 24.206 | 252 | 165 | 1 | 180 | 431 | 250 | 475 | 3.25e-13 | 73.2 |
MS.gene07594.t1 | AT1G05150 | 25.094 | 267 | 172 | 2 | 248 | 512 | 250 | 490 | 1.38e-12 | 71.2 |
MS.gene07594.t1 | AT5G63200 | 21.594 | 389 | 231 | 10 | 117 | 434 | 218 | 603 | 1.42e-11 | 67.8 |
MS.gene07594.t1 | AT5G17270 | 24.186 | 215 | 155 | 2 | 167 | 380 | 515 | 722 | 7.26e-11 | 65.9 |
MS.gene07594.t1 | AT5G17270 | 24.186 | 215 | 155 | 2 | 167 | 380 | 277 | 484 | 7.72e-11 | 65.5 |
Find 151 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCTGAAGCTCATGCTAATT+TGG | 0.170309 | 1.4:-64390751 | MS.gene07594:CDS |
AAATGATGTTACAGGTAATT+TGG | 0.170385 | 1.4:-64391891 | MS.gene07594:intron |
TTTGGAAGCTTACAATAATT+TGG | 0.173624 | 1.4:-64391789 | MS.gene07594:intron |
TGACCATGCATCAGCAAAAT+TGG | 0.177023 | 1.4:+64394435 | None:intergenic |
CTTCTCTTTGACCGTGAAAA+AGG | 0.207223 | 1.4:+64389933 | None:intergenic |
TAATTTGGCTTCTGCCTATA+AGG | 0.274347 | 1.4:-64390736 | MS.gene07594:CDS |
ATTAGCATACCTATCCTTAT+AGG | 0.292089 | 1.4:+64390722 | None:intergenic |
CCAAACTATGGCATGGCTTA+TGG | 0.303947 | 1.4:-64392686 | MS.gene07594:intron |
TGCCGAGTGTTACGGTAATA+TGG | 0.304813 | 1.4:-64395157 | MS.gene07594:CDS |
CATGTATATATTTCCAAGAT+TGG | 0.315239 | 1.4:+64391303 | None:intergenic |
AATAGTAAAATTACCATTAG+AGG | 0.332566 | 1.4:+64394334 | None:intergenic |
AGAAGATTGCAAGTTGCTTC+AGG | 0.349834 | 1.4:+64390325 | None:intergenic |
AAACAGAGGCAATACTTATA+AGG | 0.364549 | 1.4:-64390838 | MS.gene07594:CDS |
CTTCAGACACGGCCAAACTA+TGG | 0.368387 | 1.4:-64392698 | MS.gene07594:CDS |
CCTGATGCATACTTGAACCT+TGG | 0.368615 | 1.4:-64392880 | MS.gene07594:CDS |
GCCACCGAGCCAGGCTGCAC+CGG | 0.375352 | 1.4:-64390042 | MS.gene07594:CDS |
CAATCTTCTACATACACTTC+AGG | 0.378736 | 1.4:-64390311 | MS.gene07594:intron |
CCACAAGCGTTGACCAATCT+TGG | 0.379245 | 1.4:-64391316 | MS.gene07594:CDS |
ATTATAGCAAGGTTGTTATA+CGG | 0.385320 | 1.4:+64391123 | None:intergenic |
ACTTGCTATCAACCCTCTAA+TGG | 0.389345 | 1.4:-64394347 | MS.gene07594:intron |
AAATCTTGCTGGTCTGTTCA+TGG | 0.391501 | 1.4:-64393309 | MS.gene07594:CDS |
CCATAAGCCATGCCATAGTT+TGG | 0.399981 | 1.4:+64392686 | None:intergenic |
CCAAGGTTCAAGTATGCATC+AGG | 0.403218 | 1.4:+64392880 | None:intergenic |
GCACCGGGGCGTGTCGGAAG+TGG | 0.403349 | 1.4:-64390026 | MS.gene07594:CDS |
ACATTATGAGCAAGGTCAAC+TGG | 0.412081 | 1.4:-64391861 | MS.gene07594:CDS |
GCTGGTCTGTTCATGGAGTC+TGG | 0.413134 | 1.4:-64393302 | MS.gene07594:CDS |
CCGCTATAGCAGCGCGAAGC+GGG | 0.413383 | 1.4:-64390075 | MS.gene07594:CDS |
CGACACGCCCCGGTGCAGCC+TGG | 0.421904 | 1.4:+64390033 | None:intergenic |
CTATTACTTGATTGCCATTG+AGG | 0.423798 | 1.4:-64394977 | MS.gene07594:intron |
CCACCGAGCCAGGCTGCACC+GGG | 0.426798 | 1.4:-64390041 | MS.gene07594:CDS |
GACCCCATGCTGCTCCGAAC+CGG | 0.431215 | 1.4:+64389972 | None:intergenic |
ATTGCATGGTCAAATCTTGC+TGG | 0.431271 | 1.4:-64393320 | MS.gene07594:CDS |
CAAGATTGGTCAACGCTTGT+GGG | 0.432953 | 1.4:+64391317 | None:intergenic |
AATTTCAACGCCACCGAGCC+AGG | 0.434012 | 1.4:-64390051 | MS.gene07594:CDS |
TTGGCTCATCCGACAGCTCT+CGG | 0.434068 | 1.4:-64395844 | MS.gene07594:CDS |
CCTTGGTGCAATTTATTACC+AGG | 0.442505 | 1.4:-64395358 | MS.gene07594:intron |
TGACCGGTTCGGAGCAGCAT+GGG | 0.444892 | 1.4:-64389975 | MS.gene07594:CDS |
GACCATGCATCAGCAAAATT+GGG | 0.445415 | 1.4:+64394436 | None:intergenic |
CCAAGATTGGTCAACGCTTG+TGG | 0.445603 | 1.4:+64391316 | None:intergenic |
CGCCCCGGTGCAGCCTGGCT+CGG | 0.451833 | 1.4:+64390038 | None:intergenic |
CTGATGCATACTTGAACCTT+GGG | 0.451840 | 1.4:-64392879 | MS.gene07594:CDS |
AACCACCACTCTCAGCTTGT+TGG | 0.452650 | 1.4:-64395863 | MS.gene07594:CDS |
GAACGGTTCAACGCGATCTC+CGG | 0.452834 | 1.4:+64395811 | None:intergenic |
ACCAAGGAGTAGTAAATTAT+CGG | 0.453046 | 1.4:+64395374 | None:intergenic |
ACCTTGCTCATAATGTATAC+TGG | 0.453921 | 1.4:+64391868 | None:intergenic |
GACCTCATTGTAGCAAGATA+TGG | 0.458721 | 1.4:+64390896 | None:intergenic |
GGCAATACTTATAAGGAGAT+TGG | 0.459746 | 1.4:-64390831 | MS.gene07594:CDS |
CGCGCTCATGATTCTAGTGA+AGG | 0.464261 | 1.4:-64395746 | MS.gene07594:intron |
CGGAATCATGATCTCCGTCC+AGG | 0.468061 | 1.4:-64395909 | None:intergenic |
CGACGACGGCTCTTGCTTAA+CGG | 0.473736 | 1.4:+64395787 | None:intergenic |
CCACACTTTGCCGAGTGTTA+CGG | 0.474939 | 1.4:-64395165 | MS.gene07594:CDS |
AGCTCTCGGTTGCCGTTCAC+CGG | 0.478100 | 1.4:-64395830 | MS.gene07594:CDS |
TAGAGTCAGTGATGCTATCC+AGG | 0.479729 | 1.4:-64390808 | MS.gene07594:CDS |
ACCGATAATTTACTACTCCT+TGG | 0.486401 | 1.4:-64395375 | MS.gene07594:CDS |
GATTACTGTCAGGCCTACTA+TGG | 0.493816 | 1.4:-64390772 | MS.gene07594:CDS |
GGTTGATGCTCATAGTAACT+TGG | 0.496415 | 1.4:-64394160 | MS.gene07594:CDS |
GCATGAGCTTCAGCCATAGT+AGG | 0.497608 | 1.4:+64390759 | None:intergenic |
AAGTGGAGAGCGGTCAAAGC+GGG | 0.501454 | 1.4:-64390009 | MS.gene07594:CDS |
CCACTATGCAGTGACCGGTT+CGG | 0.503906 | 1.4:-64389986 | MS.gene07594:CDS |
TAATCGCACGTATGTAATCC+TGG | 0.506548 | 1.4:+64390790 | None:intergenic |
GGCTCTTGCTTAACGGCGAA+CGG | 0.508387 | 1.4:+64395794 | None:intergenic |
GGTCCTCCGCATTGATCCCT+TGG | 0.509269 | 1.4:-64390877 | MS.gene07594:CDS |
ATTGATCCCTTGGCAGCTGA+TGG | 0.509463 | 1.4:-64390867 | MS.gene07594:CDS |
CTTCGCGCTGCTATAGCGGC+CGG | 0.511272 | 1.4:+64390079 | None:intergenic |
GGCAGACCTTGTAATACTGC+AGG | 0.511471 | 1.4:+64393264 | None:intergenic |
CAGGCTGCACCGGGGCGTGT+CGG | 0.511835 | 1.4:-64390032 | MS.gene07594:CDS |
GGTAATCTAATGAAAGCTCA+AGG | 0.514812 | 1.4:-64394138 | MS.gene07594:CDS |
TGCTATAATATATAAGCAGC+AGG | 0.515077 | 1.4:-64391109 | MS.gene07594:intron |
CCCGCTTCGCGCTGCTATAG+CGG | 0.518539 | 1.4:+64390075 | None:intergenic |
CAATCTTGGAAATATATACA+TGG | 0.519958 | 1.4:-64391302 | MS.gene07594:CDS |
TACAAGACCATCAGCTGCCA+AGG | 0.521518 | 1.4:+64390860 | None:intergenic |
ATCAAGAATACATACCTCAA+TGG | 0.523924 | 1.4:+64394963 | None:intergenic |
GGCAATAACGTGAGCGACGA+CGG | 0.526386 | 1.4:+64395773 | None:intergenic |
TCTCCACTTCCGACACGCCC+CGG | 0.530515 | 1.4:+64390023 | None:intergenic |
AACCTACCTTTGCTATTGCA+TGG | 0.530684 | 1.4:-64393334 | MS.gene07594:CDS |
GCCGCTATAGCAGCGCGAAG+CGG | 0.530685 | 1.4:-64390076 | MS.gene07594:CDS |
CAGAGCCCTGCAGTATTACA+AGG | 0.533229 | 1.4:-64393270 | MS.gene07594:intron |
TGGCTTCTGCCTATAAGGAT+AGG | 0.535459 | 1.4:-64390731 | MS.gene07594:intron |
TTGGAAATATATACATGGAA+TGG | 0.538270 | 1.4:-64391297 | MS.gene07594:intron |
AAGAACATACATTATAGCAC+TGG | 0.540515 | 1.4:+64391453 | None:intergenic |
CTAGAATCATGAGCGCGTAA+AGG | 0.548037 | 1.4:+64395752 | None:intergenic |
GCCAGTATACATTATGAGCA+AGG | 0.548161 | 1.4:-64391869 | MS.gene07594:CDS |
GTGACCGGTTCGGAGCAGCA+TGG | 0.555939 | 1.4:-64389976 | MS.gene07594:CDS |
ATAGTAAAATTACCATTAGA+GGG | 0.557033 | 1.4:+64394335 | None:intergenic |
GAAACCTCTGTTGTCAAAAG+CGG | 0.557351 | 1.4:-64390107 | MS.gene07594:CDS |
GGTAATGCTCTGAAAGATGT+TGG | 0.562829 | 1.4:-64391494 | MS.gene07594:CDS |
TGCCATATTACCGTAACACT+CGG | 0.568106 | 1.4:+64395155 | None:intergenic |
TGAGCAAGGTCAACTGGACA+TGG | 0.570022 | 1.4:-64391855 | MS.gene07594:CDS |
ACATACGTGCGATTACTGTC+AGG | 0.575634 | 1.4:-64390782 | MS.gene07594:CDS |
GGCTGTAAAGAGCTACAGAC+AGG | 0.576286 | 1.4:-64390371 | MS.gene07594:CDS |
GCTACACTAAATGTAACCAC+TGG | 0.577805 | 1.4:-64391156 | MS.gene07594:CDS |
TTATTTCAGTGGACATGTAG+AGG | 0.579165 | 1.4:-64390395 | MS.gene07594:intron |
GGTGGTTGTAGTGGTGGCGA+TGG | 0.580159 | 1.4:+64395879 | None:intergenic |
GTTGATGCTCATAGTAACTT+GGG | 0.583189 | 1.4:-64394159 | MS.gene07594:CDS |
AAGTATGCATCAGGGAAGGA+AGG | 0.583668 | 1.4:+64392889 | None:intergenic |
GAACCTTGGGAATGTATACA+AGG | 0.587196 | 1.4:-64392866 | MS.gene07594:intron |
TACGCATGTATGCACTAGCT+AGG | 0.587484 | 1.4:+64394410 | None:intergenic |
GCTAGTGCATACATGCGTAA+AGG | 0.588429 | 1.4:-64394406 | MS.gene07594:CDS |
GCGGGCCACTATGCAGTGAC+CGG | 0.589624 | 1.4:-64389991 | MS.gene07594:CDS |
CCCGGTGCAGCCTGGCTCGG+TGG | 0.590358 | 1.4:+64390041 | None:intergenic |
GGTGGCGATGGTGATCTCCC+TGG | 0.590906 | 1.4:+64395891 | None:intergenic |
GTCAACGCTTGTGGGTGGTT+AGG | 0.593743 | 1.4:+64391325 | None:intergenic |
ATCAACATGCTCTTCAGACA+CGG | 0.597820 | 1.4:-64392709 | MS.gene07594:CDS |
GGTGGTTAGGCTGTAACGAA+AGG | 0.598171 | 1.4:+64391338 | None:intergenic |
GCTGAGAGTGGTGGTTGTAG+TGG | 0.599298 | 1.4:+64395870 | None:intergenic |
TAATATGGCAAATGCATGGA+AGG | 0.599920 | 1.4:-64395142 | MS.gene07594:intron |
TCAACGCGATCTCCGGTGAA+CGG | 0.601206 | 1.4:+64395818 | None:intergenic |
GAACGGCAACCGAGAGCTGT+CGG | 0.601559 | 1.4:+64395835 | None:intergenic |
GACCGGTTCGGAGCAGCATG+GGG | 0.601734 | 1.4:-64389974 | MS.gene07594:CDS |
CCGAACCGGTCACTGCATAG+TGG | 0.603256 | 1.4:+64389986 | None:intergenic |
TTACCTTGTATACATTCCCA+AGG | 0.606164 | 1.4:+64392863 | None:intergenic |
GCTGCTTATATATTATAGCA+AGG | 0.607657 | 1.4:+64391112 | None:intergenic |
TCTAATGAAAGCTCAAGGGT+TGG | 0.609689 | 1.4:-64394133 | MS.gene07594:CDS |
GCGATGGTGATCTCCCTGGA+CGG | 0.610099 | 1.4:+64395895 | None:intergenic |
ACGGTAATATGGCAAATGCA+TGG | 0.610222 | 1.4:-64395146 | MS.gene07594:CDS |
GTTGTCAAAAGCGGCTACGC+CGG | 0.612406 | 1.4:-64390098 | MS.gene07594:CDS |
GATTGGTCAACGCTTGTGGG+TGG | 0.615687 | 1.4:+64391320 | None:intergenic |
CCGTAACACTCGGCAAAGTG+TGG | 0.618577 | 1.4:+64395165 | None:intergenic |
ATTTGACCATGCAATAGCAA+AGG | 0.621397 | 1.4:+64393328 | None:intergenic |
GGAATCATGATCTCCGTCCA+GGG | 0.622815 | 1.4:-64395908 | None:intergenic |
GTAATCTAATGAAAGCTCAA+GGG | 0.626437 | 1.4:-64394137 | MS.gene07594:CDS |
TAACATGCAATAGCTTCTTG+AGG | 0.628478 | 1.4:+64392731 | None:intergenic |
GAAAGATGTTGGCAGAGTGG+AGG | 0.630480 | 1.4:-64391483 | MS.gene07594:CDS |
GACCATGCAATAGCAAAGGT+AGG | 0.630488 | 1.4:+64393332 | None:intergenic |
GCAGACCTTGTAATACTGCA+GGG | 0.633448 | 1.4:+64393265 | None:intergenic |
TGCCATATCTTGCTACAATG+AGG | 0.633633 | 1.4:-64390898 | MS.gene07594:CDS |
GCACATCAAATGTACAAGAG+TGG | 0.634726 | 1.4:-64395456 | MS.gene07594:CDS |
GAGAGTGGTGGTTGTAGTGG+TGG | 0.636309 | 1.4:+64395873 | None:intergenic |
GACACGGCCAAACTATGGCA+TGG | 0.637088 | 1.4:-64392693 | MS.gene07594:CDS |
GGCGTGTCGGAAGTGGAGAG+CGG | 0.640147 | 1.4:-64390019 | MS.gene07594:CDS |
ATGAGCCAACAAGCTGAGAG+TGG | 0.640591 | 1.4:+64395858 | None:intergenic |
AGTAAATTATCGGTGCGAAG+CGG | 0.641514 | 1.4:+64395384 | None:intergenic |
ACAAGACCATCAGCTGCCAA+GGG | 0.656374 | 1.4:+64390861 | None:intergenic |
GTTCAAGTATGCATCAGGGA+AGG | 0.661650 | 1.4:+64392885 | None:intergenic |
CTGCCAAGGGATCAATGCGG+AGG | 0.661848 | 1.4:+64390874 | None:intergenic |
TCAAGTAATAGCGAATTGCA+AGG | 0.664537 | 1.4:+64394989 | None:intergenic |
CAAGGTTCAAGTATGCATCA+GGG | 0.675585 | 1.4:+64392881 | None:intergenic |
AAATTGTTAATGCAGGAACA+TGG | 0.679005 | 1.4:-64391205 | MS.gene07594:intron |
CCTGGTAATAAATTGCACCA+AGG | 0.681422 | 1.4:+64395358 | None:intergenic |
GGCATACAGTTGTTACCTCG+AGG | 0.683086 | 1.4:-64393369 | MS.gene07594:CDS |
TTTCAGTGGACATGTAGAGG+CGG | 0.686039 | 1.4:-64390392 | MS.gene07594:intron |
AGCCAACAAGCTGAGAGTGG+TGG | 0.690346 | 1.4:+64395861 | None:intergenic |
CACCGAGCCAGGCTGCACCG+GGG | 0.693766 | 1.4:-64390040 | MS.gene07594:CDS |
GGAGCAGCATGGGGTCAATG+CGG | 0.702084 | 1.4:-64389965 | MS.gene07594:CDS |
GTTGTATACGCAATGCCTCG+AGG | 0.703270 | 1.4:+64393354 | None:intergenic |
GCTGATGGTCTTGTAAACAG+AGG | 0.706829 | 1.4:-64390852 | MS.gene07594:CDS |
ATACGGTGCAGATAATCCAG+TGG | 0.709165 | 1.4:+64391140 | None:intergenic |
TCTGAAAGATGTTGGCAGAG+TGG | 0.720915 | 1.4:-64391486 | MS.gene07594:CDS |
GAAGTGGAGAGCGGTCAAAG+CGG | 0.727678 | 1.4:-64390010 | MS.gene07594:CDS |
TTGTTAATGCAGGAACATGG+TGG | 0.744612 | 1.4:-64391202 | MS.gene07594:intron |
CAGCTGCCAAGGGATCAATG+CGG | 0.837731 | 1.4:+64390871 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAAAGATGT+AGG | + | chr1.4:64392236-64392255 | None:intergenic | 10.0% |
!! | AAAAAAAAAAAAAAGATGTA+GGG | + | chr1.4:64392235-64392254 | None:intergenic | 10.0% |
!! | AAAAAAAAAAAAAATTGAGT+AGG | + | chr1.4:64394418-64394437 | None:intergenic | 10.0% |
!!! | ACTCAATTTTTTTTTTTTTT+TGG | - | chr1.4:64394418-64394437 | MS.gene07594:CDS | 10.0% |
!!! | CATAATTTTCTATTAATAAT+TGG | + | chr1.4:64391177-64391196 | None:intergenic | 10.0% |
!! | ATTGACTAAAAAATAACAAA+TGG | + | chr1.4:64395520-64395539 | None:intergenic | 15.0% |
!! | CATATTTATATTAATAGGAT+TGG | - | chr1.4:64393507-64393526 | MS.gene07594:intron | 15.0% |
!! | GTTTGCATATTTATATTAAT+AGG | - | chr1.4:64393502-64393521 | MS.gene07594:intron | 15.0% |
!! | TGAAAATAGTAAATAAAAGA+AGG | - | chr1.4:64394167-64394186 | MS.gene07594:intron | 15.0% |
!! | TTTATTAATTCAAATTACCA+CGG | - | chr1.4:64393826-64393845 | MS.gene07594:intron | 15.0% |
!!! | AAAAAAAAAAGCATCAAATA+TGG | + | chr1.4:64391245-64391264 | None:intergenic | 15.0% |
!!! | AAAAAAAAAGCATCAAATAT+GGG | + | chr1.4:64391244-64391263 | None:intergenic | 15.0% |
!!! | AATTTATTTATTTTTGCTAC+AGG | - | chr1.4:64392748-64392767 | MS.gene07594:intron | 15.0% |
!!! | ACATTTTCTAAAAATATTTC+AGG | - | chr1.4:64392865-64392884 | MS.gene07594:intron | 15.0% |
!!! | ATATTTTGCTTTCTTATTAA+TGG | - | chr1.4:64392643-64392662 | MS.gene07594:intron | 15.0% |
!!! | TAGTTACTGATTTAAATAAT+TGG | - | chr1.4:64392262-64392281 | MS.gene07594:intron | 15.0% |
!!! | TATTCAGTTTTAATTATGAA+AGG | - | chr1.4:64394060-64394079 | MS.gene07594:intron | 15.0% |
!!! | TTGTTTAGTTTTTTTTATGT+AGG | - | chr1.4:64391965-64391984 | MS.gene07594:intron | 15.0% |
!! | AAAAAAAAAAAAGCCTTTCA+AGG | + | chr1.4:64393014-64393033 | None:intergenic | 20.0% |
!! | AAAGTTCAATTAATTAGAGA+AGG | + | chr1.4:64391556-64391575 | None:intergenic | 20.0% |
!! | AAGTATGAAATTGGTATAAT+TGG | + | chr1.4:64390147-64390166 | None:intergenic | 20.0% |
!! | AATAGTAAAATTACCATTAG+AGG | + | chr1.4:64391463-64391482 | None:intergenic | 20.0% |
!! | ATAGTAAAATTACCATTAGA+GGG | + | chr1.4:64391462-64391481 | None:intergenic | 20.0% |
!! | ATTATACCAATTTCATACTT+AGG | - | chr1.4:64390147-64390166 | MS.gene07594:intron | 20.0% |
!! | CATAAAAAAAACTAAACAAC+AGG | + | chr1.4:64391964-64391983 | None:intergenic | 20.0% |
!! | CATAACTATATATTGCATAA+AGG | + | chr1.4:64393660-64393679 | None:intergenic | 20.0% |
!! | CTTATATGTTATTATCTCTA+AGG | - | chr1.4:64391508-64391527 | MS.gene07594:intron | 20.0% |
!! | CTTTATGCAATATATAGTTA+TGG | - | chr1.4:64393658-64393677 | MS.gene07594:intron | 20.0% |
!! | TTAAAAGACAAAAAACAAAG+TGG | + | chr1.4:64394086-64394105 | None:intergenic | 20.0% |
!! | TTATACCAATTTCATACTTA+GGG | - | chr1.4:64390148-64390167 | MS.gene07594:intron | 20.0% |
!! | TTCTCTAATTAATTGAACTT+TGG | - | chr1.4:64391555-64391574 | MS.gene07594:intron | 20.0% |
!!! | AAAAAAAAAAAAGCTTGCTA+GGG | - | chr1.4:64393552-64393571 | MS.gene07594:intron | 20.0% |
!!! | AAAAAAAAGCATCAAATATG+GGG | + | chr1.4:64391243-64391262 | None:intergenic | 20.0% |
!!! | AACATTATCTTTGTTTTTCT+AGG | - | chr1.4:64394278-64394297 | MS.gene07594:intron | 20.0% |
!!! | AATAAAAGACTAAGTATTGA+AGG | + | chr1.4:64392212-64392231 | None:intergenic | 20.0% |
!!! | ACATTATCTTTGTTTTTCTA+GGG | - | chr1.4:64394279-64394298 | MS.gene07594:intron | 20.0% |
!!! | ATGTTTGAATATGTATCTTT+TGG | - | chr1.4:64391721-64391740 | MS.gene07594:intron | 20.0% |
!!! | CATTTTTATCAGGTAAAAAT+GGG | + | chr1.4:64392158-64392177 | None:intergenic | 20.0% |
!!! | GATATAGTCAATCTTATTTT+TGG | + | chr1.4:64390981-64391000 | None:intergenic | 20.0% |
!!! | TAAAAAAAAAAAAGCTTGCT+AGG | - | chr1.4:64393551-64393570 | MS.gene07594:intron | 20.0% |
!!! | TACTGATTTAAATAATTGGT+GGG | - | chr1.4:64392266-64392285 | MS.gene07594:intron | 20.0% |
!!! | TATTTTAGATTAGATGCAAT+TGG | - | chr1.4:64394253-64394272 | MS.gene07594:intron | 20.0% |
!!! | TCAATCTTATTTTTGGTTAT+TGG | + | chr1.4:64390974-64390993 | None:intergenic | 20.0% |
!!! | TTACTGATTTAAATAATTGG+TGG | - | chr1.4:64392265-64392284 | MS.gene07594:intron | 20.0% |
!!! | TTATGCTCTTATTTATTTCT+TGG | - | chr1.4:64394847-64394866 | MS.gene07594:intron | 20.0% |
!!! | TTTAGTTTTTTTTATGTAGG+TGG | - | chr1.4:64391968-64391987 | MS.gene07594:intron | 20.0% |
! | AAATGATGTTACAGGTAATT+TGG | - | chr1.4:64393903-64393922 | MS.gene07594:intron | 25.0% |
! | AATAGTAAAACACTGAATAG+TGG | - | chr1.4:64393748-64393767 | MS.gene07594:intron | 25.0% |
! | ACCATACATTCATAAAGAAA+AGG | + | chr1.4:64393250-64393269 | None:intergenic | 25.0% |
! | ATATTATTAACTGTTGCTGT+CGG | - | chr1.4:64391057-64391076 | MS.gene07594:intron | 25.0% |
! | ATTATAGCAAGGTTGTTATA+CGG | + | chr1.4:64394674-64394693 | None:intergenic | 25.0% |
! | ATTTCTTGGACAATATTGTA+GGG | - | chr1.4:64394861-64394880 | MS.gene07594:intron | 25.0% |
! | ATTTCTTTGACAGTATTGTA+GGG | - | chr1.4:64394821-64394840 | MS.gene07594:intron | 25.0% |
! | CAATCTTGGAAATATATACA+TGG | - | chr1.4:64394492-64394511 | MS.gene07594:intron | 25.0% |
! | CATGTATATATTTCCAAGAT+TGG | + | chr1.4:64394494-64394513 | None:intergenic | 25.0% |
! | GAGATAATAACATATAAGCT+TGG | + | chr1.4:64391506-64391525 | None:intergenic | 25.0% |
! | GTAAATACATCATAGCTAAT+CGG | + | chr1.4:64392618-64392637 | None:intergenic | 25.0% |
! | GTTTATTGTATCTCTTATGA+TGG | - | chr1.4:64395559-64395578 | MS.gene07594:intron | 25.0% |
! | TAACGTGTTAAGAATATGAT+AGG | - | chr1.4:64392951-64392970 | MS.gene07594:intron | 25.0% |
! | TATTTCTTGGACAATATTGT+AGG | - | chr1.4:64394860-64394879 | MS.gene07594:intron | 25.0% |
! | TATTTCTTTGACAGTATTGT+AGG | - | chr1.4:64394820-64394839 | MS.gene07594:intron | 25.0% |
! | TCTTTATGAATGTATGGTTA+TGG | - | chr1.4:64393252-64393271 | MS.gene07594:intron | 25.0% |
! | TGAAATTCTGTTTATTTCAG+TGG | - | chr1.4:64395388-64395407 | MS.gene07594:CDS | 25.0% |
! | TTATATAGAACAAATGCTCT+AGG | + | chr1.4:64394719-64394738 | None:intergenic | 25.0% |
! | TTATGAACTGTCAAATCTTA+TGG | - | chr1.4:64391776-64391795 | MS.gene07594:intron | 25.0% |
! | TTGATTGAAATTGTTAATGC+AGG | - | chr1.4:64394582-64394601 | MS.gene07594:intron | 25.0% |
! | TTGGAAATATATACATGGAA+TGG | - | chr1.4:64394497-64394516 | MS.gene07594:intron | 25.0% |
! | TTTGGAAGCTTACAATAATT+TGG | - | chr1.4:64394005-64394024 | MS.gene07594:intron | 25.0% |
!! | AAAAAAGCATGTCAAATGTT+AGG | + | chr1.4:64391701-64391720 | None:intergenic | 25.0% |
!! | AATCTAAAATAGCACGTTTA+GGG | + | chr1.4:64394244-64394263 | None:intergenic | 25.0% |
!! | ACGAAATTGATTCAATAAGA+AGG | + | chr1.4:64390229-64390248 | None:intergenic | 25.0% |
!! | ATTCTGTCTGTTATTTGTTT+GGG | - | chr1.4:64390470-64390489 | MS.gene07594:intron | 25.0% |
!! | TAATCTAAAATAGCACGTTT+AGG | + | chr1.4:64394245-64394264 | None:intergenic | 25.0% |
!! | TATTCTGTCTGTTATTTGTT+TGG | - | chr1.4:64390469-64390488 | MS.gene07594:intron | 25.0% |
!! | TCCTTTTCTTTATGAATGTA+TGG | - | chr1.4:64393246-64393265 | MS.gene07594:intron | 25.0% |
!!! | AAAAAAAGCATCAAATATGG+GGG | + | chr1.4:64391242-64391261 | None:intergenic | 25.0% |
!!! | CCATTTTTACCTGATAAAAA+TGG | - | chr1.4:64392156-64392175 | MS.gene07594:intron | 25.0% |
!!! | CCATTTTTATCAGGTAAAAA+TGG | + | chr1.4:64392159-64392178 | None:intergenic | 25.0% |
!!! | TGTACTATTTTAGTGTTTAG+TGG | - | chr1.4:64390717-64390736 | MS.gene07594:intron | 25.0% |
!!! | TTAATCCTTGTTTCTATATC+AGG | + | chr1.4:64392784-64392803 | None:intergenic | 25.0% |
!!! | TTTTTTTTATGTAGGTGGTT+AGG | - | chr1.4:64391973-64391992 | MS.gene07594:intron | 25.0% |
AAAATTGAGTAGGAATCTAG+TGG | + | chr1.4:64394408-64394427 | None:intergenic | 30.0% | |
AAACAGAGGCAATACTTATA+AGG | - | chr1.4:64394956-64394975 | MS.gene07594:intron | 30.0% | |
AAATTGAGTAGGAATCTAGT+GGG | + | chr1.4:64394407-64394426 | None:intergenic | 30.0% | |
AAATTGTTAATGCAGGAACA+TGG | - | chr1.4:64394589-64394608 | MS.gene07594:intron | 30.0% | |
AACTGTGATATAGTATCATG+TGG | - | chr1.4:64393399-64393418 | MS.gene07594:intron | 30.0% | |
AAGAACATACATTATAGCAC+TGG | + | chr1.4:64394344-64394363 | None:intergenic | 30.0% | |
AAGGAGTTTCATAGTTATGT+TGG | - | chr1.4:64393621-64393640 | MS.gene07594:intron | 30.0% | |
ACAGAATAGAAACATTTACC+TGG | + | chr1.4:64390457-64390476 | None:intergenic | 30.0% | |
ACCAAGGAGTAGTAAATTAT+CGG | + | chr1.4:64390423-64390442 | None:intergenic | 30.0% | |
ACTGTCAAATCTTATGGATA+AGG | - | chr1.4:64391782-64391801 | MS.gene07594:intron | 30.0% | |
AGAAACCCTAAGTATGAAAT+TGG | + | chr1.4:64390156-64390175 | None:intergenic | 30.0% | |
AGATATGGGATAGTAAGAAA+TGG | - | chr1.4:64393201-64393220 | MS.gene07594:intron | 30.0% | |
AGCGTATAACATAGCAAAAA+AGG | + | chr1.4:64391272-64391291 | None:intergenic | 30.0% | |
ATAAGATCAGTGCAAAGATA+TGG | - | chr1.4:64393186-64393205 | MS.gene07594:intron | 30.0% | |
ATATAACCACGATAGAACAT+AGG | - | chr1.4:64394733-64394752 | MS.gene07594:intron | 30.0% | |
ATCAAGAATACATACCTCAA+TGG | + | chr1.4:64390834-64390853 | None:intergenic | 30.0% | |
ATGCAATATATAGTTATGGC+TGG | - | chr1.4:64393662-64393681 | MS.gene07594:intron | 30.0% | |
ATTAGCATACCTATCCTTAT+AGG | + | chr1.4:64395075-64395094 | None:intergenic | 30.0% | |
ATTGTAAGCTTCCAAAAATC+TGG | + | chr1.4:64394001-64394020 | None:intergenic | 30.0% | |
CATAATATTGAAATTGTGCC+TGG | - | chr1.4:64395192-64395211 | MS.gene07594:CDS | 30.0% | |
CGAGGAATATGATTGTTTAA+CGG | - | chr1.4:64390254-64390273 | MS.gene07594:intron | 30.0% | |
GAAGCTTACAATAATTTGGT+TGG | - | chr1.4:64394009-64394028 | MS.gene07594:intron | 30.0% | |
GAATTCCTGATATAGAAACA+AGG | - | chr1.4:64392776-64392795 | MS.gene07594:intron | 30.0% | |
GCTGCTTATATATTATAGCA+AGG | + | chr1.4:64394685-64394704 | None:intergenic | 30.0% | |
GGGTTCATATTTATAATGCT+TGG | - | chr1.4:64390490-64390509 | MS.gene07594:intron | 30.0% | |
GGTTATTGGACAACAATATT+TGG | + | chr1.4:64390960-64390979 | None:intergenic | 30.0% | |
GTAATCTAATGAAAGCTCAA+GGG | - | chr1.4:64391657-64391676 | MS.gene07594:intron | 30.0% | |
GTCCTTTATTCTGATATCTA+TGG | - | chr1.4:64393783-64393802 | MS.gene07594:intron | 30.0% | |
GTGTTAAGAATATGATAGGT+TGG | - | chr1.4:64392955-64392974 | MS.gene07594:intron | 30.0% | |
TAAGATCAGTGCAAAGATAT+GGG | - | chr1.4:64393187-64393206 | MS.gene07594:intron | 30.0% | |
TCCTTCGTTGACATTAATAA+TGG | + | chr1.4:64393606-64393625 | None:intergenic | 30.0% | |
TGATTTAAATAATTGGTGGG+TGG | - | chr1.4:64392269-64392288 | MS.gene07594:intron | 30.0% | |
TGCAATGGTTATACAACTAA+TGG | + | chr1.4:64393378-64393397 | None:intergenic | 30.0% | |
TGCCATAGATATCAGAATAA+AGG | + | chr1.4:64393788-64393807 | None:intergenic | 30.0% | |
TGCTATAATATATAAGCAGC+AGG | - | chr1.4:64394685-64394704 | MS.gene07594:intron | 30.0% | |
TGTGTTACAAATGATGTTAC+AGG | - | chr1.4:64393895-64393914 | MS.gene07594:intron | 30.0% | |
TTCAATATTTATCCCTCTGT+TGG | - | chr1.4:64391315-64391334 | MS.gene07594:CDS | 30.0% | |
TTCATACTTAGGGTTTCTTA+GGG | - | chr1.4:64390158-64390177 | MS.gene07594:intron | 30.0% | |
TTGAAGCAACTAATCAAGAA+TGG | + | chr1.4:64391300-64391319 | None:intergenic | 30.0% | |
TTGTAAGCTTCCAAAAATCT+GGG | + | chr1.4:64394000-64394019 | None:intergenic | 30.0% | |
TTTAGTACTAACACACAAAC+TGG | - | chr1.4:64391010-64391029 | MS.gene07594:intron | 30.0% | |
TTTCATACTTAGGGTTTCTT+AGG | - | chr1.4:64390157-64390176 | MS.gene07594:intron | 30.0% | |
TTTCTTGGACAATATTGTAG+GGG | - | chr1.4:64394862-64394881 | MS.gene07594:intron | 30.0% | |
TTTCTTTGACAGTATTGTAG+GGG | - | chr1.4:64394822-64394841 | MS.gene07594:intron | 30.0% | |
! | AATTGAACTTTCCTTTTTGC+AGG | - | chr1.4:64390766-64390785 | MS.gene07594:CDS | 30.0% |
! | ACTATATCACAGTTTTGCAA+TGG | + | chr1.4:64393393-64393412 | None:intergenic | 30.0% |
! | TTCAATAAGAAGGCATAAAC+TGG | + | chr1.4:64390219-64390238 | None:intergenic | 30.0% |
! | TTTTGCTTCAGTTTCAATGT+TGG | + | chr1.4:64395118-64395137 | None:intergenic | 30.0% |
!! | ACATTGGTGTTTTTCATTCT+GGG | + | chr1.4:64392113-64392132 | None:intergenic | 30.0% |
!! | CAAAAAATGAAGAAGCACTT+AGG | - | chr1.4:64390600-64390619 | MS.gene07594:intron | 30.0% |
!! | GATGCAACTAGAATTTTGAT+CGG | - | chr1.4:64392977-64392996 | MS.gene07594:intron | 30.0% |
!! | GTTATTATCTCTAAGGCATA+GGG | - | chr1.4:64391515-64391534 | MS.gene07594:intron | 30.0% |
!! | TGTTATTATCTCTAAGGCAT+AGG | - | chr1.4:64391514-64391533 | MS.gene07594:intron | 30.0% |
!!! | AAGCCAAATTAAGAGTGTTT+TGG | + | chr1.4:64392061-64392080 | None:intergenic | 30.0% |
!!! | GGTTGGTTTTTTTTTCGTTT+TGG | - | chr1.4:64394026-64394045 | MS.gene07594:intron | 30.0% |
AAAACACCAATGTCTTCCAT+TGG | - | chr1.4:64392120-64392139 | MS.gene07594:intron | 35.0% | |
AAATGTTAGGACTCACTTCT+TGG | + | chr1.4:64391688-64391707 | None:intergenic | 35.0% | |
AACTGCAAGGATTATCAACT+TGG | - | chr1.4:64394758-64394777 | MS.gene07594:intron | 35.0% | |
AAGTTGTTGTCTTCAAAGCA+TGG | - | chr1.4:64392327-64392346 | MS.gene07594:intron | 35.0% | |
ACCATTAGCATGAAGATAGA+GGG | + | chr1.4:64394531-64394550 | None:intergenic | 35.0% | |
ACCGATAATTTACTACTCCT+TGG | - | chr1.4:64390419-64390438 | MS.gene07594:intron | 35.0% | |
ACCTTGCTCATAATGTATAC+TGG | + | chr1.4:64393929-64393948 | None:intergenic | 35.0% | |
AGCATGTGAATATGAAAGTG+AGG | + | chr1.4:64392554-64392573 | None:intergenic | 35.0% | |
AGTTATCCTATGTTCTATCG+TGG | + | chr1.4:64394742-64394761 | None:intergenic | 35.0% | |
ATACATCATAGCTAATCGGA+CGG | + | chr1.4:64392614-64392633 | None:intergenic | 35.0% | |
ATGCTAATGGTAGTAGTTTG+TGG | - | chr1.4:64394540-64394559 | MS.gene07594:intron | 35.0% | |
ATTGGCATCAAACAAACTCA+AGG | + | chr1.4:64391159-64391178 | None:intergenic | 35.0% | |
ATTTCAGATATGTTGCACTG+TGG | + | chr1.4:64391837-64391856 | None:intergenic | 35.0% | |
ATTTGACCATGCAATAGCAA+AGG | + | chr1.4:64392469-64392488 | None:intergenic | 35.0% | |
CAATCTTCTACATACACTTC+AGG | - | chr1.4:64395483-64395502 | MS.gene07594:CDS | 35.0% | |
CTAGACATCATAAAGTTGAC+AGG | + | chr1.4:64395338-64395357 | None:intergenic | 35.0% | |
CTATTACTTGATTGCCATTG+AGG | - | chr1.4:64390817-64390836 | MS.gene07594:CDS | 35.0% | |
GAAACCTAAAACTTCTGATG+TGG | + | chr1.4:64395255-64395274 | None:intergenic | 35.0% | |
GAATCAATTTCGTACTTTCG+AGG | - | chr1.4:64390236-64390255 | MS.gene07594:intron | 35.0% | |
GACAACAGAGGTTTCTAATA+AGG | + | chr1.4:64395682-64395701 | None:intergenic | 35.0% | |
GAGCCAAAACACTCTTAATT+TGG | - | chr1.4:64392055-64392074 | MS.gene07594:intron | 35.0% | |
GCCATTATTAATGTCAACGA+AGG | - | chr1.4:64393602-64393621 | MS.gene07594:intron | 35.0% | |
GCTTTGCTGCATATTGATAA+TGG | - | chr1.4:64393716-64393735 | MS.gene07594:intron | 35.0% | |
GGCAATACTTATAAGGAGAT+TGG | - | chr1.4:64394963-64394982 | MS.gene07594:intron | 35.0% | |
GGTAATCTAATGAAAGCTCA+AGG | - | chr1.4:64391656-64391675 | MS.gene07594:intron | 35.0% | |
GTTGATGCTCATAGTAACTT+GGG | - | chr1.4:64391635-64391654 | MS.gene07594:intron | 35.0% | |
TAAATTCAGTGCAACTAGCA+TGG | + | chr1.4:64393874-64393893 | None:intergenic | 35.0% | |
TAACATGCAATAGCTTCTTG+AGG | + | chr1.4:64393066-64393085 | None:intergenic | 35.0% | |
TAATATGGCAAATGCATGGA+AGG | - | chr1.4:64390652-64390671 | MS.gene07594:intron | 35.0% | |
TACAATAATAGTCCCGATCT+TGG | - | chr1.4:64392014-64392033 | MS.gene07594:intron | 35.0% | |
TACCATTAGCATGAAGATAG+AGG | + | chr1.4:64394532-64394551 | None:intergenic | 35.0% | |
TAGAACATAGGATAACTGCA+AGG | - | chr1.4:64394745-64394764 | MS.gene07594:intron | 35.0% | |
TATCAATATGCAGCAAAGCA+TGG | + | chr1.4:64393715-64393734 | None:intergenic | 35.0% | |
TCAAGTAATAGCGAATTGCA+AGG | + | chr1.4:64390808-64390827 | None:intergenic | 35.0% | |
TCACAAATGTTAGCTGTGTT+TGG | - | chr1.4:64391093-64391112 | MS.gene07594:intron | 35.0% | |
TCATACTTAGGGTTTCTTAG+GGG | - | chr1.4:64390159-64390178 | MS.gene07594:intron | 35.0% | |
TCTGTATCGAACTGTGAATT+TGG | + | chr1.4:64392303-64392322 | None:intergenic | 35.0% | |
TGCTTGAATGAACTTCTGTT+AGG | - | chr1.4:64392570-64392589 | MS.gene07594:intron | 35.0% | |
TGTAAGCTTCCAAAAATCTG+GGG | + | chr1.4:64393999-64394018 | None:intergenic | 35.0% | |
TGTCATTAACTATGTTCTGC+AGG | - | chr1.4:64391613-64391632 | MS.gene07594:intron | 35.0% | |
TTAAAGCCCCAAATAAATCC+TGG | + | chr1.4:64393309-64393328 | None:intergenic | 35.0% | |
TTACCTTGTATACATTCCCA+AGG | + | chr1.4:64392934-64392953 | None:intergenic | 35.0% | |
TTATTTCAGTGGACATGTAG+AGG | - | chr1.4:64395399-64395418 | MS.gene07594:CDS | 35.0% | |
TTGGTCTCCAGGATTTATTT+GGG | - | chr1.4:64393299-64393318 | MS.gene07594:CDS | 35.0% | |
! | CAGAATCTAACATTTTGTGC+AGG | - | chr1.4:64392404-64392423 | MS.gene07594:intron | 35.0% |
! | CAGTGCAACATATCTGAAAT+TGG | - | chr1.4:64391837-64391856 | MS.gene07594:CDS | 35.0% |
! | CTTTCCTTTTTGCAGGAAAA+AGG | - | chr1.4:64390773-64390792 | MS.gene07594:CDS | 35.0% |
! | GAAGTTACTACTTGCACTTT+TGG | - | chr1.4:64392675-64392694 | MS.gene07594:intron | 35.0% |
! | TAATTTGGCTTCTGCCTATA+AGG | - | chr1.4:64395058-64395077 | MS.gene07594:intron | 35.0% |
! | TAGTAGTTTGTGGGTTATGT+GGG | - | chr1.4:64394550-64394569 | MS.gene07594:intron | 35.0% |
! | TGCTAATGGTAGTAGTTTGT+GGG | - | chr1.4:64394541-64394560 | MS.gene07594:intron | 35.0% |
! | TGGATCTTCTGACATCTTTT+GGG | - | chr1.4:64395212-64395231 | MS.gene07594:CDS | 35.0% |
!! | AGAATTTTGATCGGCATTGA+TGG | - | chr1.4:64392986-64393005 | MS.gene07594:intron | 35.0% |
!! | GACATTGGTGTTTTTCATTC+TGG | + | chr1.4:64392114-64392133 | None:intergenic | 35.0% |
AACTCAAGGTGAGGCTTATA+TGG | + | chr1.4:64391145-64391164 | None:intergenic | 40.0% | |
AATCACCAACAGATGTTGCA+AGG | + | chr1.4:64395314-64395333 | None:intergenic | 40.0% | |
ACACACAAACTGGATTCTGT+TGG | - | chr1.4:64391020-64391039 | MS.gene07594:intron | 40.0% | |
ACATTATGAGCAAGGTCAAC+TGG | - | chr1.4:64393933-64393952 | MS.gene07594:intron | 40.0% | |
ACGGTAATATGGCAAATGCA+TGG | - | chr1.4:64390648-64390667 | MS.gene07594:intron | 40.0% | |
ACTATTTGCAGTCTTGCAGA+TGG | + | chr1.4:64392384-64392403 | None:intergenic | 40.0% | |
AGAAGATTGCAAGTTGCTTC+AGG | + | chr1.4:64395472-64395491 | None:intergenic | 40.0% | |
AGTAAATTATCGGTGCGAAG+CGG | + | chr1.4:64390413-64390432 | None:intergenic | 40.0% | |
ATCAACATGCTCTTCAGACA+CGG | - | chr1.4:64393085-64393104 | MS.gene07594:intron | 40.0% | |
ATTGCATAAAGGAAGCCATG+AGG | + | chr1.4:64393649-64393668 | None:intergenic | 40.0% | |
ATTGCATGGTCAAATCTTGC+TGG | - | chr1.4:64392474-64392493 | MS.gene07594:intron | 40.0% | |
CAAAAGATGTCAGAAGATCC+AGG | + | chr1.4:64395213-64395232 | None:intergenic | 40.0% | |
CAAATAAATCCTGGAGACCA+AGG | + | chr1.4:64393300-64393319 | None:intergenic | 40.0% | |
CAAGGTTCAAGTATGCATCA+GGG | + | chr1.4:64392916-64392935 | None:intergenic | 40.0% | |
CATCAAACAAACTCAAGGTG+AGG | + | chr1.4:64391154-64391173 | None:intergenic | 40.0% | |
CCTGGTAATAAATTGCACCA+AGG | + | chr1.4:64390439-64390458 | None:intergenic | 40.0% | |
CGGACGGTCTGATTTATAAA+AGG | + | chr1.4:64392598-64392617 | None:intergenic | 40.0% | |
CTAATGTGCCACAACTTTGT+TGG | - | chr1.4:64390688-64390707 | MS.gene07594:intron | 40.0% | |
CTGATGCATACTTGAACCTT+GGG | - | chr1.4:64392915-64392934 | MS.gene07594:intron | 40.0% | |
CTTCTCTTTGACCGTGAAAA+AGG | + | chr1.4:64395864-64395883 | None:intergenic | 40.0% | |
CTTGGTCTCCAGGATTTATT+TGG | - | chr1.4:64393298-64393317 | MS.gene07594:CDS | 40.0% | |
GAAACCTCTGTTGTCAAAAG+CGG | - | chr1.4:64395687-64395706 | MS.gene07594:intron | 40.0% | |
GAACCTTGGGAATGTATACA+AGG | - | chr1.4:64392928-64392947 | MS.gene07594:intron | 40.0% | |
GACCATGCATCAGCAAAATT+GGG | + | chr1.4:64391361-64391380 | None:intergenic | 40.0% | |
GACCTCATTGTAGCAAGATA+TGG | + | chr1.4:64394901-64394920 | None:intergenic | 40.0% | |
GCACATCAAATGTACAAGAG+TGG | - | chr1.4:64390338-64390357 | MS.gene07594:CDS | 40.0% | |
GCCAGTATACATTATGAGCA+AGG | - | chr1.4:64393925-64393944 | MS.gene07594:intron | 40.0% | |
GCTACACTAAATGTAACCAC+TGG | - | chr1.4:64394638-64394657 | MS.gene07594:intron | 40.0% | |
GTATGACCAATGGAAGACAT+TGG | + | chr1.4:64392129-64392148 | None:intergenic | 40.0% | |
GTGCAAGTAGTAACTTCTAC+AGG | + | chr1.4:64392672-64392691 | None:intergenic | 40.0% | |
GTTTACTAAATTGCAAGCCG+TGG | + | chr1.4:64393846-64393865 | None:intergenic | 40.0% | |
TAAACACTGATCGATGACCT+TGG | - | chr1.4:64393280-64393299 | MS.gene07594:CDS | 40.0% | |
TAATCGCACGTATGTAATCC+TGG | + | chr1.4:64395007-64395026 | None:intergenic | 40.0% | |
TCAATGCAGTTCACCAAGAT+CGG | + | chr1.4:64392030-64392049 | None:intergenic | 40.0% | |
TCCCTCTATCTTCATGCTAA+TGG | - | chr1.4:64394527-64394546 | MS.gene07594:intron | 40.0% | |
TCTAATGAAAGCTCAAGGGT+TGG | - | chr1.4:64391661-64391680 | MS.gene07594:intron | 40.0% | |
TGAAACCCAGAAACAACACT+CGG | - | chr1.4:64394204-64394223 | MS.gene07594:intron | 40.0% | |
TGACCATGCATCAGCAAAAT+TGG | + | chr1.4:64391362-64391381 | None:intergenic | 40.0% | |
TGATAAAAATGGCCATGTGC+TGG | - | chr1.4:64392167-64392186 | MS.gene07594:intron | 40.0% | |
TGCCATATCTTGCTACAATG+AGG | - | chr1.4:64394896-64394915 | MS.gene07594:intron | 40.0% | |
TGCCATATTACCGTAACACT+CGG | + | chr1.4:64390642-64390661 | None:intergenic | 40.0% | |
TGCTTCAGTTTCAATGTTGG+AGG | + | chr1.4:64395115-64395134 | None:intergenic | 40.0% | |
TGGTCTCCAGGATTTATTTG+GGG | - | chr1.4:64393300-64393319 | MS.gene07594:CDS | 40.0% | |
TTGTTAATGCAGGAACATGG+TGG | - | chr1.4:64394592-64394611 | MS.gene07594:intron | 40.0% | |
! | AAAATAGCACGTTTAGGGTC+TGG | + | chr1.4:64394239-64394258 | None:intergenic | 40.0% |
! | AAATCTTGCTGGTCTGTTCA+TGG | - | chr1.4:64392485-64392504 | MS.gene07594:intron | 40.0% |
! | AGTTTCAATGTTGGAGGCAT+TGG | + | chr1.4:64395109-64395128 | None:intergenic | 40.0% |
! | CCTTGGTGCAATTTATTACC+AGG | - | chr1.4:64390436-64390455 | MS.gene07594:intron | 40.0% |
! | CGTGAACTTACATGTTGCTT+TGG | - | chr1.4:64390884-64390903 | MS.gene07594:CDS | 40.0% |
! | CTGGATCTTCTGACATCTTT+TGG | - | chr1.4:64395211-64395230 | MS.gene07594:CDS | 40.0% |
! | GGATCTTCTGACATCTTTTG+GGG | - | chr1.4:64395213-64395232 | MS.gene07594:CDS | 40.0% |
! | GGTTGATGCTCATAGTAACT+TGG | - | chr1.4:64391634-64391653 | MS.gene07594:intron | 40.0% |
! | GTAGTAGTTTGTGGGTTATG+TGG | - | chr1.4:64394549-64394568 | MS.gene07594:intron | 40.0% |
! | GTGTCCACATCAGAAGTTTT+AGG | - | chr1.4:64395248-64395267 | MS.gene07594:intron | 40.0% |
! | GTTGCCTTTTTCCTGCAAAA+AGG | + | chr1.4:64390780-64390799 | None:intergenic | 40.0% |
! | TTGGTGAACTGCATTGATGT+TGG | - | chr1.4:64392033-64392052 | MS.gene07594:intron | 40.0% |
!! | AACCTACCTTTGCTATTGCA+TGG | - | chr1.4:64392460-64392479 | MS.gene07594:intron | 40.0% |
!! | ACTTGCTATCAACCCTCTAA+TGG | - | chr1.4:64391447-64391466 | MS.gene07594:intron | 40.0% |
!! | ATAGTTATGTTGGCTCCTCA+TGG | - | chr1.4:64393631-64393650 | MS.gene07594:intron | 40.0% |
!! | CTTTTTCACGGTCAAAGAGA+AGG | - | chr1.4:64395862-64395881 | MS.gene07594:CDS | 40.0% |
!! | GCATGATTTTGATATGTGCG+TGG | - | chr1.4:64390577-64390596 | MS.gene07594:intron | 40.0% |
!! | GGTAATGCTCTGAAAGATGT+TGG | - | chr1.4:64394300-64394319 | MS.gene07594:intron | 40.0% |
!! | GTTTCAATGTTGGAGGCATT+GGG | + | chr1.4:64395108-64395127 | None:intergenic | 40.0% |
!! | TGTTTCCGAGTGTTGTTTCT+GGG | + | chr1.4:64394212-64394231 | None:intergenic | 40.0% |
!! | TTGTTTCCGAGTGTTGTTTC+TGG | + | chr1.4:64394213-64394232 | None:intergenic | 40.0% |
!!! | AGCACATGGCCATTTTTATC+AGG | + | chr1.4:64392168-64392187 | None:intergenic | 40.0% |
!!! | TTGTTTTTGCGTGAATTGCG+TGG | - | chr1.4:64390533-64390552 | MS.gene07594:intron | 40.0% |
!!! | TTTTTTTTCCCCCCTTCATC+AGG | - | chr1.4:64393029-64393048 | MS.gene07594:intron | 40.0% |
AACAGATGTTGCAAGGACGA+TGG | + | chr1.4:64395307-64395326 | None:intergenic | 45.0% | |
AAGTATGCATCAGGGAAGGA+AGG | + | chr1.4:64392908-64392927 | None:intergenic | 45.0% | |
ACAGATGTTGCAAGGACGAT+GGG | + | chr1.4:64395306-64395325 | None:intergenic | 45.0% | |
ACATACGTGCGATTACTGTC+AGG | - | chr1.4:64395012-64395031 | MS.gene07594:intron | 45.0% | |
ACTGTGCAGCATAGAGAAAC+TGG | + | chr1.4:64391897-64391916 | None:intergenic | 45.0% | |
ACTGTTGCTGTCGGTAGTAA+TGG | - | chr1.4:64391066-64391085 | MS.gene07594:intron | 45.0% | |
AGCAGAGAGATGTCTCAAAC+TGG | + | chr1.4:64392084-64392103 | None:intergenic | 45.0% | |
ATACGGTGCAGATAATCCAG+TGG | + | chr1.4:64394657-64394676 | None:intergenic | 45.0% | |
ATCCCTAAAGCCTGATGAAG+GGG | + | chr1.4:64393042-64393061 | None:intergenic | 45.0% | |
ATCGTCCTTGCAACATCTGT+TGG | - | chr1.4:64395306-64395325 | MS.gene07594:intron | 45.0% | |
ATGGCAAATGCATGGAAGGT+AGG | - | chr1.4:64390656-64390675 | MS.gene07594:intron | 45.0% | |
CAAAGCATGGACTCAGATGA+TGG | - | chr1.4:64392340-64392359 | MS.gene07594:intron | 45.0% | |
CAACACGTCCAACAAAGTTG+TGG | + | chr1.4:64390699-64390718 | None:intergenic | 45.0% | |
CAATGCAGTTCACCAAGATC+GGG | + | chr1.4:64392029-64392048 | None:intergenic | 45.0% | |
CATCCCTAAAGCCTGATGAA+GGG | + | chr1.4:64393043-64393062 | None:intergenic | 45.0% | |
CCAAACTATGGCATGGCTTA+TGG | - | chr1.4:64393108-64393127 | MS.gene07594:intron | 45.0% | |
CCAAGGTTCAAGTATGCATC+AGG | + | chr1.4:64392917-64392936 | None:intergenic | 45.0% | |
CCATAAGCCATGCCATAGTT+TGG | + | chr1.4:64393111-64393130 | None:intergenic | 45.0% | |
CCTGATGCATACTTGAACCT+TGG | - | chr1.4:64392914-64392933 | MS.gene07594:intron | 45.0% | |
CTAGAATCATGAGCGCGTAA+AGG | + | chr1.4:64390045-64390064 | None:intergenic | 45.0% | |
GACCATGCAATAGCAAAGGT+AGG | + | chr1.4:64392465-64392484 | None:intergenic | 45.0% | |
GACCGTGAAAAAGGTTGAAG+CGG | + | chr1.4:64395855-64395874 | None:intergenic | 45.0% | |
GATTACTGTCAGGCCTACTA+TGG | - | chr1.4:64395022-64395041 | MS.gene07594:intron | 45.0% | |
GCAGACCTTGTAATACTGCA+GGG | + | chr1.4:64392532-64392551 | None:intergenic | 45.0% | |
GCTAGTGCATACATGCGTAA+AGG | - | chr1.4:64391388-64391407 | MS.gene07594:intron | 45.0% | |
GGCTGAAGCTCATGCTAATT+TGG | - | chr1.4:64395043-64395062 | MS.gene07594:intron | 45.0% | |
GTTCAAGTATGCATCAGGGA+AGG | + | chr1.4:64392912-64392931 | None:intergenic | 45.0% | |
TACGCATGTATGCACTAGCT+AGG | + | chr1.4:64391387-64391406 | None:intergenic | 45.0% | |
TACTGGATTCCCAGTATGAG+CGG | - | chr1.4:64391931-64391950 | MS.gene07594:intron | 45.0% | |
TAGAGTCAGTGATGCTATCC+AGG | - | chr1.4:64394986-64395005 | MS.gene07594:CDS | 45.0% | |
TATGTTGCACTGTGGCAGAA+AGG | + | chr1.4:64391829-64391848 | None:intergenic | 45.0% | |
TCTGAAAGATGTTGGCAGAG+TGG | - | chr1.4:64394308-64394327 | MS.gene07594:intron | 45.0% | |
TGCCGAGTGTTACGGTAATA+TGG | - | chr1.4:64390637-64390656 | MS.gene07594:intron | 45.0% | |
TGGCTTCTGCCTATAAGGAT+AGG | - | chr1.4:64395063-64395082 | MS.gene07594:intron | 45.0% | |
TTGCTGTCGGTAGTAATGGT+AGG | - | chr1.4:64391070-64391089 | MS.gene07594:intron | 45.0% | |
TTTCAGTGGACATGTAGAGG+CGG | - | chr1.4:64395402-64395421 | MS.gene07594:CDS | 45.0% | |
! | AGTTTGAGACATCTCTCTGC+TGG | - | chr1.4:64392083-64392102 | MS.gene07594:intron | 45.0% |
! | AGTTTGAGATGAGGCTCTAC+TGG | - | chr1.4:64391914-64391933 | MS.gene07594:intron | 45.0% |
! | ATGCTGCACAGTTTGAGATG+AGG | - | chr1.4:64391905-64391924 | MS.gene07594:intron | 45.0% |
! | CAAGATTGGTCAACGCTTGT+GGG | + | chr1.4:64394480-64394499 | None:intergenic | 45.0% |
! | GTCCCAATTTTGCTGATGCA+TGG | - | chr1.4:64391356-64391375 | MS.gene07594:intron | 45.0% |
! | GTTTGAGACATCTCTCTGCT+GGG | - | chr1.4:64392084-64392103 | MS.gene07594:intron | 45.0% |
! | TGCATGTGACCCCAGATTTT+TGG | - | chr1.4:64393987-64394006 | MS.gene07594:intron | 45.0% |
!! | AAGTATTGAAGGAACCCTCC+AGG | + | chr1.4:64392201-64392220 | None:intergenic | 45.0% |
!! | GCTGATGGTCTTGTAAACAG+AGG | - | chr1.4:64394942-64394961 | MS.gene07594:intron | 45.0% |
!! | GGCATTGATGGATCCTTGAA+AGG | - | chr1.4:64392998-64393017 | MS.gene07594:intron | 45.0% |
!! | TTAATAAAAAAAAAAAATAC+TGG | + | chr1.4:64393814-64393833 | None:intergenic | 5.0% |
AACCACCACTCTCAGCTTGT+TGG | - | chr1.4:64389931-64389950 | MS.gene07594:CDS | 50.0% | |
ACAAGACCATCAGCTGCCAA+GGG | + | chr1.4:64394936-64394955 | None:intergenic | 50.0% | |
ACTGGCTATAGAGCAGGTTG+GGG | + | chr1.4:64391874-64391893 | None:intergenic | 50.0% | |
AGATGTTGCAAGGACGATGG+GGG | + | chr1.4:64395304-64395323 | None:intergenic | 50.0% | |
ATGAGCCAACAAGCTGAGAG+TGG | + | chr1.4:64389939-64389958 | None:intergenic | 50.0% | |
ATTGATCCCTTGGCAGCTGA+TGG | - | chr1.4:64394927-64394946 | MS.gene07594:intron | 50.0% | |
CAGAGCCCTGCAGTATTACA+AGG | - | chr1.4:64392524-64392543 | MS.gene07594:intron | 50.0% | |
CAGATGTTGCAAGGACGATG+GGG | + | chr1.4:64395305-64395324 | None:intergenic | 50.0% | |
CCACACTTTGCCGAGTGTTA+CGG | - | chr1.4:64390629-64390648 | MS.gene07594:intron | 50.0% | |
CGCGCTCATGATTCTAGTGA+AGG | - | chr1.4:64390048-64390067 | MS.gene07594:CDS | 50.0% | |
CTCGAGATCGATGCTTCTTG+TGG | - | chr1.4:64390103-64390122 | MS.gene07594:CDS | 50.0% | |
CTTCAGACACGGCCAAACTA+TGG | - | chr1.4:64393096-64393115 | MS.gene07594:intron | 50.0% | |
GAAAGATGTTGGCAGAGTGG+AGG | - | chr1.4:64394311-64394330 | MS.gene07594:intron | 50.0% | |
GCAGCATAGAGAAACTGGAC+TGG | + | chr1.4:64391892-64391911 | None:intergenic | 50.0% | |
GCATCCCTAAAGCCTGATGA+AGG | + | chr1.4:64393044-64393063 | None:intergenic | 50.0% | |
GCATGAGCTTCAGCCATAGT+AGG | + | chr1.4:64395038-64395057 | None:intergenic | 50.0% | |
GGCAGACCTTGTAATACTGC+AGG | + | chr1.4:64392533-64392552 | None:intergenic | 50.0% | |
GGCATACAGTTGTTACCTCG+AGG | - | chr1.4:64392425-64392444 | MS.gene07594:intron | 50.0% | |
GGCTGTAAAGAGCTACAGAC+AGG | - | chr1.4:64395423-64395442 | MS.gene07594:CDS | 50.0% | |
GGTGGTTAGGCTGTAACGAA+AGG | + | chr1.4:64394459-64394478 | None:intergenic | 50.0% | |
GTTGTATACGCAATGCCTCG+AGG | + | chr1.4:64392443-64392462 | None:intergenic | 50.0% | |
TACAAGACCATCAGCTGCCA+AGG | + | chr1.4:64394937-64394956 | None:intergenic | 50.0% | |
TCCCTAAAGCCTGATGAAGG+GGG | + | chr1.4:64393041-64393060 | None:intergenic | 50.0% | |
TGAGCAAGGTCAACTGGACA+TGG | - | chr1.4:64393939-64393958 | MS.gene07594:intron | 50.0% | |
TGCAGCAAAGCATGGTCAAC+TGG | + | chr1.4:64393707-64393726 | None:intergenic | 50.0% | |
TGGGAGACGAGTATGACCAA+TGG | + | chr1.4:64392139-64392158 | None:intergenic | 50.0% | |
! | CCAAGATTGGTCAACGCTTG+TGG | + | chr1.4:64394481-64394500 | None:intergenic | 50.0% |
! | GACTGGCTATAGAGCAGGTT+GGG | + | chr1.4:64391875-64391894 | None:intergenic | 50.0% |
! | GCATGGACTCAGATGATGGT+TGG | - | chr1.4:64392344-64392363 | MS.gene07594:intron | 50.0% |
!! | AACTGGACTGGCTATAGAGC+AGG | + | chr1.4:64391880-64391899 | None:intergenic | 50.0% |
!! | AGGTAGAGTACCGCTCATAC+TGG | + | chr1.4:64391944-64391963 | None:intergenic | 50.0% |
!! | CCACAAGCGTTGACCAATCT+TGG | - | chr1.4:64394478-64394497 | MS.gene07594:intron | 50.0% |
!! | GGCCGCTTCAACCTTTTTCA+CGG | - | chr1.4:64395850-64395869 | MS.gene07594:CDS | 50.0% |
!! | GGTAGAGTACCGCTCATACT+GGG | + | chr1.4:64391943-64391962 | None:intergenic | 50.0% |
!!! | GTAGCCGCTTTTGACAACAG+AGG | + | chr1.4:64395694-64395713 | None:intergenic | 50.0% |
AAGTGGAGAGCGGTCAAAGC+GGG | - | chr1.4:64395785-64395804 | MS.gene07594:CDS | 55.0% | |
AATTTCAACGCCACCGAGCC+AGG | - | chr1.4:64395743-64395762 | MS.gene07594:intron | 55.0% | |
AGCCAACAAGCTGAGAGTGG+TGG | + | chr1.4:64389936-64389955 | None:intergenic | 55.0% | |
CAGCTGCCAAGGGATCAATG+CGG | + | chr1.4:64394926-64394945 | None:intergenic | 55.0% | |
CCACTATGCAGTGACCGGTT+CGG | - | chr1.4:64395808-64395827 | MS.gene07594:CDS | 55.0% | |
CCCCCCTTCATCAGGCTTTA+GGG | - | chr1.4:64393037-64393056 | MS.gene07594:intron | 55.0% | |
CCCTAAAGCCTGATGAAGGG+GGG | + | chr1.4:64393040-64393059 | None:intergenic | 55.0% | |
CCGTAACACTCGGCAAAGTG+TGG | + | chr1.4:64390632-64390651 | None:intergenic | 55.0% | |
CGACGACGGCTCTTGCTTAA+CGG | + | chr1.4:64390010-64390029 | None:intergenic | 55.0% | |
GAACGGTTCAACGCGATCTC+CGG | + | chr1.4:64389986-64390005 | None:intergenic | 55.0% | |
GAAGTGGAGAGCGGTCAAAG+CGG | - | chr1.4:64395784-64395803 | MS.gene07594:CDS | 55.0% | |
GACACGGCCAAACTATGGCA+TGG | - | chr1.4:64393101-64393120 | MS.gene07594:intron | 55.0% | |
GAGAGTGGTGGTTGTAGTGG+TGG | + | chr1.4:64389924-64389943 | None:intergenic | 55.0% | |
GATCGATGACCTTGGTCTCC+AGG | - | chr1.4:64393288-64393307 | MS.gene07594:CDS | 55.0% | |
GCAGCAGCAGAACCAACAGA+GGG | + | chr1.4:64391330-64391349 | None:intergenic | 55.0% | |
GCTGAGAGTGGTGGTTGTAG+TGG | + | chr1.4:64389927-64389946 | None:intergenic | 55.0% | |
GGCAATAACGTGAGCGACGA+CGG | + | chr1.4:64390024-64390043 | None:intergenic | 55.0% | |
GGCTCTTGCTTAACGGCGAA+CGG | + | chr1.4:64390003-64390022 | None:intergenic | 55.0% | |
GTCAACGCTTGTGGGTGGTT+AGG | + | chr1.4:64394472-64394491 | None:intergenic | 55.0% | |
GTTGTCAAAAGCGGCTACGC+CGG | - | chr1.4:64395696-64395715 | MS.gene07594:intron | 55.0% | |
TCAACGCGATCTCCGGTGAA+CGG | + | chr1.4:64389979-64389998 | None:intergenic | 55.0% | |
TCCCCCCTTCATCAGGCTTT+AGG | - | chr1.4:64393036-64393055 | MS.gene07594:intron | 55.0% | |
TGCAGCAGCAGAACCAACAG+AGG | + | chr1.4:64391331-64391350 | None:intergenic | 55.0% | |
TTGGCTCATCCGACAGCTCT+CGG | - | chr1.4:64389950-64389969 | MS.gene07594:CDS | 55.0% | |
! | AAAATGGCCATGTGCTGGCC+TGG | - | chr1.4:64392172-64392191 | MS.gene07594:intron | 55.0% |
! | GATTGGTCAACGCTTGTGGG+TGG | + | chr1.4:64394477-64394496 | None:intergenic | 55.0% |
! | GCTGGTCTGTTCATGGAGTC+TGG | - | chr1.4:64392492-64392511 | MS.gene07594:intron | 55.0% |
!! | GGACTGGCTATAGAGCAGGT+TGG | + | chr1.4:64391876-64391895 | None:intergenic | 55.0% |
AAGGAACCCTCCAGGCTTCC+AGG | + | chr1.4:64392193-64392212 | None:intergenic | 60.0% | |
AGCTCTCGGTTGCCGTTCAC+CGG | - | chr1.4:64389964-64389983 | MS.gene07594:CDS | 60.0% | |
CCGAACCGGTCACTGCATAG+TGG | + | chr1.4:64395811-64395830 | None:intergenic | 60.0% | |
CTGCCAAGGGATCAATGCGG+AGG | + | chr1.4:64394923-64394942 | None:intergenic | 60.0% | |
GAACGGCAACCGAGAGCTGT+CGG | + | chr1.4:64389962-64389981 | None:intergenic | 60.0% | |
GCGATGGTGATCTCCCTGGA+CGG | + | chr1.4:64389902-64389921 | None:intergenic | 60.0% | |
GGAGCAGCATGGGGTCAATG+CGG | - | chr1.4:64395829-64395848 | MS.gene07594:CDS | 60.0% | |
! | GGTCCTCCGCATTGATCCCT+TGG | - | chr1.4:64394917-64394936 | MS.gene07594:intron | 60.0% |
! | GGTGGTTGTAGTGGTGGCGA+TGG | + | chr1.4:64389918-64389937 | None:intergenic | 60.0% |
!! | TGACCGGTTCGGAGCAGCAT+GGG | - | chr1.4:64395819-64395838 | MS.gene07594:CDS | 60.0% |
CAGGCTTCCAGGCCAGCACA+TGG | + | chr1.4:64392182-64392201 | None:intergenic | 65.0% | |
CCCGCTTCGCGCTGCTATAG+CGG | + | chr1.4:64395722-64395741 | None:intergenic | 65.0% | |
CCGCTATAGCAGCGCGAAGC+GGG | - | chr1.4:64395719-64395738 | MS.gene07594:intron | 65.0% | |
CTTCGCGCTGCTATAGCGGC+CGG | + | chr1.4:64395718-64395737 | None:intergenic | 65.0% | |
GACCCCATGCTGCTCCGAAC+CGG | + | chr1.4:64395825-64395844 | None:intergenic | 65.0% | |
GCCGCTATAGCAGCGCGAAG+CGG | - | chr1.4:64395718-64395737 | MS.gene07594:intron | 65.0% | |
GCGGGCCACTATGCAGTGAC+CGG | - | chr1.4:64395803-64395822 | MS.gene07594:CDS | 65.0% | |
GGCGTGTCGGAAGTGGAGAG+CGG | - | chr1.4:64395775-64395794 | MS.gene07594:CDS | 65.0% | |
GGTGGCGATGGTGATCTCCC+TGG | + | chr1.4:64389906-64389925 | None:intergenic | 65.0% | |
TCTCCACTTCCGACACGCCC+CGG | + | chr1.4:64395774-64395793 | None:intergenic | 65.0% | |
! | CATGTGCTGGCCTGGAAGCC+TGG | - | chr1.4:64392180-64392199 | MS.gene07594:intron | 65.0% |
! | TGCTGGCCTGGAAGCCTGGA+GGG | - | chr1.4:64392184-64392203 | MS.gene07594:intron | 65.0% |
!! | GACCGGTTCGGAGCAGCATG+GGG | - | chr1.4:64395820-64395839 | MS.gene07594:CDS | 65.0% |
!! | GTGACCGGTTCGGAGCAGCA+TGG | - | chr1.4:64395818-64395837 | MS.gene07594:CDS | 65.0% |
! | GTGCTGGCCTGGAAGCCTGG+AGG | - | chr1.4:64392183-64392202 | MS.gene07594:intron | 70.0% |
CACCGAGCCAGGCTGCACCG+GGG | - | chr1.4:64395754-64395773 | MS.gene07594:CDS | 75.0% | |
CAGGCTGCACCGGGGCGTGT+CGG | - | chr1.4:64395762-64395781 | MS.gene07594:CDS | 75.0% | |
CCACCGAGCCAGGCTGCACC+GGG | - | chr1.4:64395753-64395772 | MS.gene07594:CDS | 75.0% | |
GCACCGGGGCGTGTCGGAAG+TGG | - | chr1.4:64395768-64395787 | MS.gene07594:CDS | 75.0% | |
GCCACCGAGCCAGGCTGCAC+CGG | - | chr1.4:64395752-64395771 | MS.gene07594:CDS | 75.0% | |
! | CGACACGCCCCGGTGCAGCC+TGG | + | chr1.4:64395764-64395783 | None:intergenic | 80.0% |
! | CGCCCCGGTGCAGCCTGGCT+CGG | + | chr1.4:64395759-64395778 | None:intergenic | 80.0% |
!!! | CCCGGTGCAGCCTGGCTCGG+TGG | + | chr1.4:64395756-64395775 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 64389892 | 64395924 | 64389892 | ID=MS.gene07594 |
chr1.4 | mRNA | 64389892 | 64395924 | 64389892 | ID=MS.gene07594.t1;Parent=MS.gene07594 |
chr1.4 | exon | 64395747 | 64395924 | 64395747 | ID=MS.gene07594.t1.exon1;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64395747 | 64395924 | 64395747 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64395359 | 64395504 | 64395359 | ID=MS.gene07594.t1.exon2;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64395359 | 64395504 | 64395359 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64395143 | 64395241 | 64395143 | ID=MS.gene07594.t1.exon3;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64395143 | 64395241 | 64395143 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64394978 | 64395028 | 64394978 | ID=MS.gene07594.t1.exon4;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64394978 | 64395028 | 64394978 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64394348 | 64394464 | 64394348 | ID=MS.gene07594.t1.exon5;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64394348 | 64394464 | 64394348 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64394125 | 64394181 | 64394125 | ID=MS.gene07594.t1.exon6;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64394125 | 64394181 | 64394125 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64393271 | 64393390 | 64393271 | ID=MS.gene07594.t1.exon7;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64393271 | 64393390 | 64393271 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64392867 | 64392929 | 64392867 | ID=MS.gene07594.t1.exon8;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64392867 | 64392929 | 64392867 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64392687 | 64392765 | 64392687 | ID=MS.gene07594.t1.exon9;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64392687 | 64392765 | 64392687 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64391790 | 64391899 | 64391790 | ID=MS.gene07594.t1.exon10;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64391790 | 64391899 | 64391790 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64391463 | 64391516 | 64391463 | ID=MS.gene07594.t1.exon11;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64391463 | 64391516 | 64391463 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64391298 | 64391365 | 64391298 | ID=MS.gene07594.t1.exon12;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64391298 | 64391365 | 64391298 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64391110 | 64391212 | 64391110 | ID=MS.gene07594.t1.exon13;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64391110 | 64391212 | 64391110 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64390732 | 64390934 | 64390732 | ID=MS.gene07594.t1.exon14;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64390732 | 64390934 | 64390732 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64390312 | 64390408 | 64390312 | ID=MS.gene07594.t1.exon15;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64390312 | 64390408 | 64390312 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
chr1.4 | exon | 64389892 | 64390128 | 64389892 | ID=MS.gene07594.t1.exon16;Parent=MS.gene07594.t1 |
chr1.4 | CDS | 64389892 | 64390128 | 64389892 | ID=cds.MS.gene07594.t1;Parent=MS.gene07594.t1 |
Gene Sequence |
Protein sequence |