Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08600.t1 | XP_003606450.1 | 98.3 | 417 | 5 | 1 | 1 | 415 | 1 | 417 | 3.90E-236 | 827 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08600.t1 | Q9FS87 | 86.4 | 411 | 55 | 1 | 5 | 415 | 3 | 412 | 1.9e-207 | 723.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08600.t1 | G7JQF7 | 98.3 | 417 | 5 | 1 | 1 | 415 | 1 | 417 | 2.8e-236 | 827.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052922 | MS.gene08600 | 0.828951 | 6.76E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95617 | MS.gene08600 | PPI |
| MS.gene08600 | MS.gene84175 | PPI |
| MS.gene08600 | MS.gene94677 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08600.t1 | MTR_4g060480 | 98.321 | 417 | 5 | 1 | 1 | 415 | 1 | 417 | 0.0 | 853 |
| MS.gene08600.t1 | MTR_4g060480 | 97.892 | 332 | 5 | 1 | 1 | 330 | 1 | 332 | 0.0 | 678 |
| MS.gene08600.t1 | MTR_0837s0010 | 33.333 | 384 | 253 | 2 | 21 | 404 | 7 | 387 | 7.17e-66 | 219 |
| MS.gene08600.t1 | MTR_7g068850 | 28.796 | 382 | 259 | 6 | 35 | 411 | 45 | 418 | 5.97e-46 | 164 |
| MS.gene08600.t1 | MTR_2057s0010 | 26.937 | 271 | 192 | 5 | 37 | 305 | 3 | 269 | 2.72e-22 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08600.t1 | AT3G45300 | 89.153 | 378 | 41 | 0 | 38 | 415 | 32 | 409 | 0.0 | 697 |
| MS.gene08600.t1 | AT3G51840 | 26.790 | 377 | 267 | 5 | 36 | 411 | 54 | 422 | 6.33e-42 | 153 |
| MS.gene08600.t1 | AT3G06810 | 26.736 | 288 | 199 | 6 | 132 | 409 | 530 | 815 | 1.67e-21 | 97.4 |
| MS.gene08600.t1 | AT5G65110 | 23.955 | 359 | 221 | 13 | 107 | 413 | 133 | 491 | 1.02e-11 | 67.4 |
| MS.gene08600.t1 | AT5G65110 | 23.955 | 359 | 221 | 13 | 107 | 413 | 133 | 491 | 1.11e-11 | 67.0 |
Find 101 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTAGTTTATCCAATTTC+TGG | 0.126605 | 4.1:-38643730 | None:intergenic |
| GGATCTGTTGGTCTTTCTTA+TGG | 0.218631 | 4.1:+38642422 | MS.gene08600:CDS |
| ATTCAGTACTGCCCAGAAAT+TGG | 0.276268 | 4.1:+38643718 | MS.gene08600:CDS |
| TGTTAACTTGTGGAAAAGTA+TGG | 0.285642 | 4.1:+38641527 | MS.gene08600:CDS |
| GAGATCAGAAGAATGATTAT+TGG | 0.293324 | 4.1:+38646589 | MS.gene08600:CDS |
| TGCTTATTTGCAGAGGAGTA+TGG | 0.296519 | 4.1:+38642338 | MS.gene08600:intron |
| AGCAACACAAGTTGCTTTGC+AGG | 0.308452 | 4.1:+38646468 | MS.gene08600:CDS |
| CATGATGTCTGGACTGGATT+TGG | 0.321758 | 4.1:+38644604 | MS.gene08600:CDS |
| AGCAGTTCGGTCGTCCTATT+GGG | 0.323036 | 4.1:+38644708 | MS.gene08600:CDS |
| GAGCAGTTCGGTCGTCCTAT+TGG | 0.326208 | 4.1:+38644707 | MS.gene08600:CDS |
| GTTCCGGAGGAAAATGTTCT+TGG | 0.329541 | 4.1:+38643885 | MS.gene08600:CDS |
| TCTTCTGATCTCACTTGTTC+CGG | 0.339052 | 4.1:-38646578 | None:intergenic |
| CTTCGAGAATTGCTTTGTTC+CGG | 0.341846 | 4.1:+38643869 | MS.gene08600:CDS |
| TGGGGATCATGTGGGAGCTT+TGG | 0.343115 | 4.1:+38643014 | MS.gene08600:CDS |
| TGCAAAGCTGATCGTGTAGA+TGG | 0.343954 | 4.1:+38643164 | MS.gene08600:CDS |
| AACAAGATGTGGTGTACTAA+TGG | 0.357977 | 4.1:+38643206 | MS.gene08600:CDS |
| GAAGAGATTAGCCGAGCTTC+AGG | 0.365845 | 4.1:+38642401 | MS.gene08600:CDS |
| CCCTAGTTTATCCAATTTCT+GGG | 0.377085 | 4.1:-38643729 | None:intergenic |
| TCAACTTTGAAGCTTATCTC+TGG | 0.384395 | 4.1:+38642994 | MS.gene08600:intron |
| TTGCAGGCGATACAATGTTT+AGG | 0.392157 | 4.1:+38646484 | MS.gene08600:CDS |
| TCTGAAAAGAGTTGAGAAAA+TGG | 0.394488 | 4.1:-38640251 | None:intergenic |
| CTTCGATGACACTCAGATAC+AGG | 0.395511 | 4.1:+38640327 | MS.gene08600:CDS |
| GGAGTCTATGTCATGATGTC+TGG | 0.411304 | 4.1:+38644593 | MS.gene08600:intron |
| TGGGGAGTTTCAGTTTATAC+AGG | 0.418608 | 4.1:+38644727 | MS.gene08600:CDS |
| ATGCGAAGCTCTACGAGATC+GGG | 0.423929 | 4.1:+38646554 | MS.gene08600:CDS |
| TGCTCTCTTTGTCGAACATA+AGG | 0.427952 | 4.1:-38644689 | None:intergenic |
| TTACCAGTTGATTGATACAT+AGG | 0.435581 | 4.1:-38642457 | None:intergenic |
| ATAAACTGAAACTCCCCAAT+AGG | 0.438380 | 4.1:-38644722 | None:intergenic |
| GCAGAGGAGTATGGAGGGCT+TGG | 0.439310 | 4.1:+38642347 | MS.gene08600:intron |
| TTCCGGAGGAAAATGTTCTT+GGG | 0.444098 | 4.1:+38643886 | MS.gene08600:CDS |
| TAACCTATGTATCAATCAAC+TGG | 0.447355 | 4.1:+38642454 | MS.gene08600:CDS |
| GACGCAACAGCAGGGTCAAA+AGG | 0.449570 | 4.1:+38643425 | MS.gene08600:CDS |
| CATACTAATGTTTGAGCAGT+TGG | 0.450831 | 4.1:-38643230 | None:intergenic |
| CAACTTTGAAGCTTATCTCT+GGG | 0.454090 | 4.1:+38642995 | MS.gene08600:intron |
| ACAAGATGTGGTGTACTAAT+GGG | 0.455535 | 4.1:+38643207 | MS.gene08600:CDS |
| ATCATCGAGAAGGGAATGCC+TGG | 0.460608 | 4.1:+38643461 | MS.gene08600:CDS |
| ATAGCGAGGATGAGAAGAAT+TGG | 0.466311 | 4.1:-38640275 | None:intergenic |
| GAGGAATGAAGTAGTGGAAA+AGG | 0.476214 | 4.1:-38640305 | None:intergenic |
| ATACATCTTTACAGTCTTCA+CGG | 0.482149 | 4.1:+38644868 | MS.gene08600:CDS |
| GAGTATGGAGGGCTTGGTCT+AGG | 0.483008 | 4.1:+38642353 | MS.gene08600:CDS |
| GAAAATGTTCTTGGGAAAGA+AGG | 0.485757 | 4.1:+38643894 | MS.gene08600:CDS |
| ATGGGAGAATTTAATCTCCA+TGG | 0.486600 | 4.1:+38641546 | MS.gene08600:CDS |
| TATTGGACGTGATCTCTTCA+AGG | 0.497284 | 4.1:+38646606 | MS.gene08600:CDS |
| GATGCGAAGCTCTACGAGAT+CGG | 0.508301 | 4.1:+38646553 | MS.gene08600:CDS |
| CTATGTCATGATGTCTGGAC+TGG | 0.510832 | 4.1:+38644598 | MS.gene08600:CDS |
| CTTGTATCATTGTATAGCAA+TGG | 0.513555 | 4.1:+38642379 | MS.gene08600:CDS |
| CTCCATGGGATTACTGCACC+AGG | 0.518403 | 4.1:+38641561 | MS.gene08600:CDS |
| GCAAAGCTGATCGTGTAGAT+GGG | 0.520482 | 4.1:+38643165 | MS.gene08600:CDS |
| GCTTATCTCTGGGGATCATG+TGG | 0.520908 | 4.1:+38643005 | MS.gene08600:intron |
| TACTAATTTCAGGATTGTGC+TGG | 0.524388 | 4.1:+38646421 | MS.gene08600:intron |
| AGCCGAGCTTCAGGATCTGT+TGG | 0.526762 | 4.1:+38642410 | MS.gene08600:CDS |
| TTATGTGTATTCTGTAGCTC+GGG | 0.527867 | 4.1:+38644973 | MS.gene08600:CDS |
| AAGCTCTACGAGATCGGGGC+CGG | 0.529045 | 4.1:+38646559 | MS.gene08600:CDS |
| ATACAATGTTTAGGTGGAAA+CGG | 0.532313 | 4.1:+38646493 | MS.gene08600:CDS |
| CTTATGTGTATTCTGTAGCT+CGG | 0.533799 | 4.1:+38644972 | MS.gene08600:CDS |
| CACTGCATTTATCATCGAGA+AGG | 0.536640 | 4.1:+38643451 | MS.gene08600:CDS |
| CGAGAATTGCTTTGTTCCGG+AGG | 0.542177 | 4.1:+38643872 | MS.gene08600:CDS |
| AAAATGTTCTTGGGAAAGAA+GGG | 0.542799 | 4.1:+38643895 | MS.gene08600:CDS |
| GTTAACTTGTGGAAAAGTAT+GGG | 0.545610 | 4.1:+38641528 | MS.gene08600:CDS |
| TAATTTAGGATGTTAACTTG+TGG | 0.547605 | 4.1:+38641517 | MS.gene08600:intron |
| CCCAGAAATTGGATAAACTA+GGG | 0.547673 | 4.1:+38643729 | MS.gene08600:CDS |
| ATAATTTGTGTGATCAATGT+GGG | 0.552867 | 4.1:-38641017 | None:intergenic |
| TGGGAGAATTTAATCTCCAT+GGG | 0.554351 | 4.1:+38641547 | MS.gene08600:CDS |
| GCCCAGAAATTGGATAAACT+AGG | 0.571430 | 4.1:+38643728 | MS.gene08600:CDS |
| CTGCATAATACCAAGGGGAC+CGG | 0.575815 | 4.1:-38644645 | None:intergenic |
| GTTCGACAAAGAGAGCAGTT+CGG | 0.583442 | 4.1:+38644695 | MS.gene08600:CDS |
| TATGTGAACGAGTATCCAAC+CGG | 0.585904 | 4.1:+38646517 | MS.gene08600:CDS |
| CAGGCGATACAATGTTTAGG+TGG | 0.587882 | 4.1:+38646487 | MS.gene08600:CDS |
| AATAATTTGTGTGATCAATG+TGG | 0.589596 | 4.1:-38641018 | None:intergenic |
| TACTTAACGGGAACAAGATG+TGG | 0.589905 | 4.1:+38643195 | MS.gene08600:CDS |
| GACCAACAGATCCTGAAGCT+CGG | 0.593218 | 4.1:-38642412 | None:intergenic |
| AACTTTGAAGCTTATCTCTG+GGG | 0.593388 | 4.1:+38642996 | MS.gene08600:intron |
| TCACACAAATTATTTCCCAA+AGG | 0.594666 | 4.1:+38641027 | MS.gene08600:CDS |
| TACCTGGTGCAGTAATCCCA+TGG | 0.597662 | 4.1:-38641563 | None:intergenic |
| ATCGAAGAGGAATGAAGTAG+TGG | 0.599042 | 4.1:-38640311 | None:intergenic |
| CAAAGCTGATCGTGTAGATG+GGG | 0.599234 | 4.1:+38643166 | MS.gene08600:CDS |
| CGCATCTCTGAGGAGACGAC+CGG | 0.599352 | 4.1:-38646536 | None:intergenic |
| GTAGCTCGGGACTGTGACAA+CGG | 0.602533 | 4.1:+38644986 | MS.gene08600:CDS |
| TTATTTGCAGAGGAGTATGG+AGG | 0.603677 | 4.1:+38642341 | MS.gene08600:intron |
| CTTATCTCTGGGGATCATGT+GGG | 0.603883 | 4.1:+38643006 | MS.gene08600:CDS |
| TATTTGCAGAGGAGTATGGA+GGG | 0.604314 | 4.1:+38642342 | MS.gene08600:intron |
| ACTGCATTTATCATCGAGAA+GGG | 0.609190 | 4.1:+38643452 | MS.gene08600:CDS |
| ATCAATGTGGGAAGCATGAG+GGG | 0.621018 | 4.1:-38641005 | None:intergenic |
| GTTCTTGGGAAAGAAGGGAA+AGG | 0.623097 | 4.1:+38643900 | MS.gene08600:CDS |
| TGTCTGGACTGGATTTGGAA+AGG | 0.626784 | 4.1:+38644609 | MS.gene08600:CDS |
| ACATGACTGCATAATACCAA+GGG | 0.627108 | 4.1:-38644651 | None:intergenic |
| CTCTTTGTCGAACATAAGGA+AGG | 0.631959 | 4.1:-38644685 | None:intergenic |
| GTATCTGAGTGTCATCGAAG+AGG | 0.631985 | 4.1:-38640324 | None:intergenic |
| TTGGATAAACTAGGGATGCG+AGG | 0.637106 | 4.1:+38643737 | MS.gene08600:CDS |
| TCTCTGAGGAGACGACCGGT+TGG | 0.638940 | 4.1:-38646532 | None:intergenic |
| TCATCGAGAAGGGAATGCCT+GGG | 0.639355 | 4.1:+38643462 | MS.gene08600:CDS |
| GACATGACTGCATAATACCA+AGG | 0.639799 | 4.1:-38644652 | None:intergenic |
| GAAAAGGCAGCAGCATAGCG+AGG | 0.651975 | 4.1:-38640289 | None:intergenic |
| GATCAATGTGGGAAGCATGA+GGG | 0.653184 | 4.1:-38641006 | None:intergenic |
| GCAGTTCGGTCGTCCTATTG+GGG | 0.659632 | 4.1:+38644709 | MS.gene08600:CDS |
| TGATCAATGTGGGAAGCATG+AGG | 0.662322 | 4.1:-38641007 | None:intergenic |
| CGTAGAGCTTCGCATCTCTG+AGG | 0.668421 | 4.1:-38646546 | None:intergenic |
| TGCGAAGCTCTACGAGATCG+GGG | 0.673463 | 4.1:+38646555 | MS.gene08600:CDS |
| CAACGGAAAAGTTGACCCAA+AGG | 0.674588 | 4.1:+38645003 | MS.gene08600:CDS |
| AAAGCTGATCGTGTAGATGG+GGG | 0.688332 | 4.1:+38643167 | MS.gene08600:CDS |
| CATGACTGCATAATACCAAG+GGG | 0.751632 | 4.1:-38644650 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATAATAAAAAAAATCAA+AGG | - | chr4.1:38645702-38645721 | None:intergenic | 10.0% |
| !! | AATTGAAAAATTCAATTAAA+GGG | - | chr4.1:38645124-38645143 | None:intergenic | 10.0% |
| !! | GAAATAATCTTTATATTATT+TGG | + | chr4.1:38643962-38643981 | MS.gene08600:intron | 10.0% |
| !! | TAATTGAAAAATTCAATTAA+AGG | - | chr4.1:38645125-38645144 | None:intergenic | 10.0% |
| !! | TTAAACAAAGAAAATTAAAA+TGG | - | chr4.1:38643787-38643806 | None:intergenic | 10.0% |
| !!! | ATTTTAGAATAAAGAAAATA+CGG | - | chr4.1:38641662-38641681 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAGAAGAAGAA+TGG | + | chr4.1:38645493-38645512 | MS.gene08600:intron | 15.0% |
| !! | AATAAAATAAACCCTTAATT+TGG | - | chr4.1:38644172-38644191 | None:intergenic | 15.0% |
| !! | ACATATATATAGTATAAAAC+CGG | + | chr4.1:38643312-38643331 | MS.gene08600:intron | 15.0% |
| !! | ACTGTAATAAAATGATTTAT+CGG | - | chr4.1:38643643-38643662 | None:intergenic | 15.0% |
| !! | ATAAAATAAACCCTTAATTT+GGG | - | chr4.1:38644171-38644190 | None:intergenic | 15.0% |
| !! | ATTTAATAATACATACCTTT+GGG | - | chr4.1:38641045-38641064 | None:intergenic | 15.0% |
| !!! | AAATTTGAACTTTTTTCATT+TGG | + | chr4.1:38640865-38640884 | MS.gene08600:intron | 15.0% |
| !!! | AATTATTAAGAAAGACTTTT+TGG | + | chr4.1:38645673-38645692 | MS.gene08600:intron | 15.0% |
| !!! | ATTTTATATGTCTTACAATT+TGG | - | chr4.1:38643051-38643070 | None:intergenic | 15.0% |
| !!! | GTTTTATACTATATATATGT+GGG | - | chr4.1:38643312-38643331 | None:intergenic | 15.0% |
| !!! | TAGTCTTTATTATTTTTGAA+AGG | + | chr4.1:38643940-38643959 | MS.gene08600:intron | 15.0% |
| !!! | TCTTTTATCTATAAACAAAT+AGG | - | chr4.1:38640812-38640831 | None:intergenic | 15.0% |
| !!! | TTTTACAAAAACAGAAAAAT+GGG | - | chr4.1:38640426-38640445 | None:intergenic | 15.0% |
| !!! | TTTTAGAATAAAGAAAATAC+GGG | - | chr4.1:38641661-38641680 | None:intergenic | 15.0% |
| !!! | TTTTTACAAAAACAGAAAAA+TGG | - | chr4.1:38640427-38640446 | None:intergenic | 15.0% |
| !! | AAAATGTAAACATCATTCTT+GGG | + | chr4.1:38645098-38645117 | MS.gene08600:intron | 20.0% |
| !! | AAATTGAATGATATGGAATA+GGG | + | chr4.1:38642198-38642217 | MS.gene08600:intron | 20.0% |
| !! | AGTAAAACTTCAAAAATAAG+TGG | - | chr4.1:38644135-38644154 | None:intergenic | 20.0% |
| !! | ATGAATACAAAGAAAACTAT+AGG | + | chr4.1:38645309-38645328 | MS.gene08600:intron | 20.0% |
| !! | ATTACACAAATTGAATGATA+TGG | + | chr4.1:38642191-38642210 | MS.gene08600:intron | 20.0% |
| !! | CATTTAATAATACATACCTT+TGG | - | chr4.1:38641046-38641065 | None:intergenic | 20.0% |
| !! | CTTAAATATTTGATATTCCA+AGG | + | chr4.1:38643084-38643103 | MS.gene08600:intron | 20.0% |
| !! | GTTACAAAAACAGATAAATT+GGG | - | chr4.1:38640497-38640516 | None:intergenic | 20.0% |
| !! | TCCTTCATATAAAAACATTA+GGG | + | chr4.1:38641339-38641358 | MS.gene08600:intron | 20.0% |
| !! | TGATTTATGATAGAGAATTA+TGG | + | chr4.1:38645968-38645987 | MS.gene08600:intron | 20.0% |
| !! | TGTTACAAAAACAGATAAAT+TGG | - | chr4.1:38640498-38640517 | None:intergenic | 20.0% |
| !! | TTTACAAAAACAGAAAAATG+GGG | - | chr4.1:38640425-38640444 | None:intergenic | 20.0% |
| !!! | AAGATTTTTAAAGATTGTGT+AGG | - | chr4.1:38645866-38645885 | None:intergenic | 20.0% |
| !!! | AATTTGAACTTTGTTCATTT+TGG | + | chr4.1:38640445-38640464 | MS.gene08600:intron | 20.0% |
| !!! | AATTTGAACTTTTTATACCT+TGG | + | chr4.1:38640517-38640536 | MS.gene08600:intron | 20.0% |
| !!! | ATATCTAAGATCTGTTTTAA+AGG | + | chr4.1:38644022-38644041 | MS.gene08600:intron | 20.0% |
| !!! | GAAAATAAAAAAGTATTACC+TGG | - | chr4.1:38641582-38641601 | None:intergenic | 20.0% |
| !!! | GGTTTTATACTATATATATG+TGG | - | chr4.1:38643313-38643332 | None:intergenic | 20.0% |
| !!! | TCTGTTTCTTATTGTTAATA+CGG | + | chr4.1:38645038-38645057 | MS.gene08600:intron | 20.0% |
| !!! | TGTAATTTCTAGAATCATTT+TGG | + | chr4.1:38641848-38641867 | MS.gene08600:intron | 20.0% |
| !!! | TTTTACGAAAACAGATAAAT+GGG | - | chr4.1:38640847-38640866 | None:intergenic | 20.0% |
| !!! | TTTTAGTAAGAGACTAAATT+GGG | + | chr4.1:38641380-38641399 | MS.gene08600:intron | 20.0% |
| !!! | TTTTTACGAAAACAGATAAA+TGG | - | chr4.1:38640848-38640867 | None:intergenic | 20.0% |
| !!! | TTTTTAGTAAGAGACTAAAT+TGG | + | chr4.1:38641379-38641398 | MS.gene08600:intron | 20.0% |
| ! | AAAATAAGTGGAAGATTAAG+AGG | - | chr4.1:38644123-38644142 | None:intergenic | 25.0% |
| ! | AAAATACCAAATTACAAGAG+TGG | - | chr4.1:38645732-38645751 | None:intergenic | 25.0% |
| ! | AAATTAGTAAACACCCAATT+TGG | - | chr4.1:38641427-38641446 | None:intergenic | 25.0% |
| ! | AACAATAAGAAACAGATTTG+AGG | - | chr4.1:38645034-38645053 | None:intergenic | 25.0% |
| ! | AATTTGTGTAATACTGCAAA+AGG | - | chr4.1:38642183-38642202 | None:intergenic | 25.0% |
| ! | ACAAATTAGTCCATCTATTA+AGG | + | chr4.1:38641191-38641210 | MS.gene08600:intron | 25.0% |
| ! | ACCTTATCTTGTCTAATAAT+AGG | - | chr4.1:38645161-38645180 | None:intergenic | 25.0% |
| ! | ATTAACTTTCATGATTTCGA+GGG | - | chr4.1:38645838-38645857 | None:intergenic | 25.0% |
| ! | CAAATTGAATGATATGGAAT+AGG | + | chr4.1:38642197-38642216 | MS.gene08600:intron | 25.0% |
| ! | CATTGTCTCTTTAATACAAA+CGG | + | chr4.1:38641802-38641821 | MS.gene08600:intron | 25.0% |
| ! | CCTGAACAAAAAGAAAATAA+TGG | - | chr4.1:38644575-38644594 | None:intergenic | 25.0% |
| ! | CCTTATCTTGTCTAATAATA+GGG | - | chr4.1:38645160-38645179 | None:intergenic | 25.0% |
| ! | CCTTCATATAAAAACATTAG+GGG | + | chr4.1:38641340-38641359 | MS.gene08600:intron | 25.0% |
| ! | GAAAATGTAAACATCATTCT+TGG | + | chr4.1:38645097-38645116 | MS.gene08600:intron | 25.0% |
| ! | GAATTACACAACATTAAACT+AGG | - | chr4.1:38642630-38642649 | None:intergenic | 25.0% |
| ! | GATTATATGTATGTGATTCT+AGG | - | chr4.1:38641689-38641708 | None:intergenic | 25.0% |
| ! | GTAATAAAATGATTTATCGG+TGG | - | chr4.1:38643640-38643659 | None:intergenic | 25.0% |
| ! | GTCCTTCATATAAAAACATT+AGG | + | chr4.1:38641338-38641357 | MS.gene08600:intron | 25.0% |
| ! | TACAATTTCAAAGACCAAAT+TGG | + | chr4.1:38641908-38641927 | MS.gene08600:intron | 25.0% |
| ! | TACGATTAACATACTAACAT+CGG | + | chr4.1:38641264-38641283 | MS.gene08600:intron | 25.0% |
| ! | TATTAACTTTCATGATTTCG+AGG | - | chr4.1:38645839-38645858 | None:intergenic | 25.0% |
| ! | TGAATAGTATGATGCAAAAA+AGG | - | chr4.1:38646378-38646397 | None:intergenic | 25.0% |
| ! | TTATTAGACAAGATAAGGTT+AGG | + | chr4.1:38645162-38645181 | MS.gene08600:intron | 25.0% |
| ! | TTTACGAAAACAGATAAATG+GGG | - | chr4.1:38640846-38640865 | None:intergenic | 25.0% |
| ! | TTTATACAGGTTCATTTCAT+CGG | + | chr4.1:38644740-38644759 | MS.gene08600:intron | 25.0% |
| !! | AATAATTTGTGTGATCAATG+TGG | - | chr4.1:38641021-38641040 | None:intergenic | 25.0% |
| !! | ATAATTTGTGTGATCAATGT+GGG | - | chr4.1:38641020-38641039 | None:intergenic | 25.0% |
| !! | ATTGCATATCATGCTTTTAA+TGG | + | chr4.1:38640923-38640942 | MS.gene08600:intron | 25.0% |
| !! | CCATTATTTTCTTTTTGTTC+AGG | + | chr4.1:38644572-38644591 | MS.gene08600:intron | 25.0% |
| !! | TAATTTAGGATGTTAACTTG+TGG | + | chr4.1:38641517-38641536 | MS.gene08600:intron | 25.0% |
| !! | TATTTTCCAGCTATAAACTA+AGG | - | chr4.1:38643575-38643594 | None:intergenic | 25.0% |
| !! | TCTTCTATTTTCTATCAACT+TGG | + | chr4.1:38640891-38640910 | MS.gene08600:intron | 25.0% |
| !! | TGGTATTATTTATCTTTTGC+CGG | - | chr4.1:38641142-38641161 | None:intergenic | 25.0% |
| !! | TTCATTGTCAATTGATCTTT+TGG | + | chr4.1:38644820-38644839 | MS.gene08600:intron | 25.0% |
| !!! | AATTGCAATTTTGATAACAC+CGG | + | chr4.1:38645646-38645665 | MS.gene08600:intron | 25.0% |
| !!! | AATTTGGTCTTTGAAATTGT+AGG | - | chr4.1:38641909-38641928 | None:intergenic | 25.0% |
| !!! | AGTATTTTTGTTTCTGTTCA+TGG | - | chr4.1:38642581-38642600 | None:intergenic | 25.0% |
| !!! | ATCAGACAATTTTGAGATTA+AGG | + | chr4.1:38645532-38645551 | MS.gene08600:intron | 25.0% |
| !!! | ATTTTGGAAAATTATGCAAC+TGG | - | chr4.1:38644447-38644466 | None:intergenic | 25.0% |
| !!! | ATTTTGGAATATTGATAACG+TGG | + | chr4.1:38641864-38641883 | MS.gene08600:intron | 25.0% |
| !!! | CTATCATTTCTTTTTCACTA+AGG | - | chr4.1:38640703-38640722 | None:intergenic | 25.0% |
| !!! | GGGATTTTAAAAGACTATTT+TGG | - | chr4.1:38645903-38645922 | None:intergenic | 25.0% |
| !!! | GTTGTGTTTTGATCTAATTT+AGG | + | chr4.1:38641503-38641522 | MS.gene08600:intron | 25.0% |
| !!! | TTACAACTTTGTTTTTGTCA+TGG | + | chr4.1:38646213-38646232 | MS.gene08600:intron | 25.0% |
| !!! | TTTCTTTTTCACTAAGGTTA+TGG | - | chr4.1:38640697-38640716 | None:intergenic | 25.0% |
| AAAACATTAGGGGATTAACT+TGG | + | chr4.1:38641350-38641369 | MS.gene08600:intron | 30.0% | |
| AAAACCGGATGTAATAATGT+AGG | + | chr4.1:38643327-38643346 | MS.gene08600:intron | 30.0% | |
| AAAATGTTCTTGGGAAAGAA+GGG | + | chr4.1:38643895-38643914 | MS.gene08600:CDS | 30.0% | |
| AAACATTAGGGGATTAACTT+GGG | + | chr4.1:38641351-38641370 | MS.gene08600:intron | 30.0% | |
| AAAGAAGAAGAATGGTAACA+AGG | + | chr4.1:38645501-38645520 | MS.gene08600:intron | 30.0% | |
| AAAGGAGTTGAAGGAATTAA+AGG | + | chr4.1:38642787-38642806 | MS.gene08600:intron | 30.0% | |
| AAATAGTAGAGTTGTTGCAT+TGG | - | chr4.1:38646354-38646373 | None:intergenic | 30.0% | |
| AAGAGACAATGACATTATGT+TGG | - | chr4.1:38641793-38641812 | None:intergenic | 30.0% | |
| AATAAGAAACAGATTTGAGG+AGG | - | chr4.1:38645031-38645050 | None:intergenic | 30.0% | |
| ACCAGTTGAATTAAGTCTTA+CGG | - | chr4.1:38640566-38640585 | None:intergenic | 30.0% | |
| AGAATGTAGATACTATTTGC+AGG | + | chr4.1:38642118-38642137 | MS.gene08600:intron | 30.0% | |
| AGACTTAATTCAACTGGTTA+AGG | + | chr4.1:38640568-38640587 | MS.gene08600:intron | 30.0% | |
| AGATTCACCATACAATACAA+AGG | - | chr4.1:38644797-38644816 | None:intergenic | 30.0% | |
| ATACAATGTTTAGGTGGAAA+CGG | + | chr4.1:38646493-38646512 | MS.gene08600:CDS | 30.0% | |
| ATACATCTTTACAGTCTTCA+CGG | + | chr4.1:38644868-38644887 | MS.gene08600:CDS | 30.0% | |
| ATCAATCAACTGGTAATTGA+AGG | + | chr4.1:38642464-38642483 | MS.gene08600:intron | 30.0% | |
| ATCTTGTCAGTAAAATCAAG+TGG | - | chr4.1:38643821-38643840 | None:intergenic | 30.0% | |
| ATTTCAAATCGTCCTTCTTT+AGG | + | chr4.1:38642227-38642246 | MS.gene08600:intron | 30.0% | |
| CAAATAAGCAGACATAGAAT+TGG | - | chr4.1:38642328-38642347 | None:intergenic | 30.0% | |
| CCATCTATTAAGGAGTTAAA+GGG | + | chr4.1:38641201-38641220 | MS.gene08600:intron | 30.0% | |
| CCCTATTATTAGACAAGATA+AGG | + | chr4.1:38645157-38645176 | MS.gene08600:intron | 30.0% | |
| CTATTAATGAGCACAAGAAA+TGG | - | chr4.1:38642907-38642926 | None:intergenic | 30.0% | |
| CTGTTATAATGAATGATCCA+GGG | + | chr4.1:38641307-38641326 | MS.gene08600:intron | 30.0% | |
| CTTAACTGTAGACAAACAAA+TGG | - | chr4.1:38642951-38642970 | None:intergenic | 30.0% | |
| CTTCTTAGTATGGAATCAAA+AGG | - | chr4.1:38645250-38645269 | None:intergenic | 30.0% | |
| CTTGTATCATTGTATAGCAA+TGG | + | chr4.1:38642379-38642398 | MS.gene08600:CDS | 30.0% | |
| GAAACAAAAATACTTGCCAA+AGG | + | chr4.1:38642587-38642606 | MS.gene08600:CDS | 30.0% | |
| GAGATCAGAAGAATGATTAT+TGG | + | chr4.1:38646589-38646608 | MS.gene08600:CDS | 30.0% | |
| GAGTAACTAACTATCCAATT+TGG | - | chr4.1:38641925-38641944 | None:intergenic | 30.0% | |
| GATTCACCATACAATACAAA+GGG | - | chr4.1:38644796-38644815 | None:intergenic | 30.0% | |
| GGATCATTCATTATAACAGA+AGG | - | chr4.1:38641306-38641325 | None:intergenic | 30.0% | |
| GTTAGTTACTCTACTTTACT+TGG | + | chr4.1:38641934-38641953 | MS.gene08600:intron | 30.0% | |
| TAAAACGTAGAATCGTAACA+AGG | + | chr4.1:38645455-38645474 | MS.gene08600:intron | 30.0% | |
| TAAAATCAAGTGGTTGGAAA+TGG | - | chr4.1:38643811-38643830 | None:intergenic | 30.0% | |
| TAAATCAGAACACCTAAAGA+AGG | - | chr4.1:38642242-38642261 | None:intergenic | 30.0% | |
| TAACCTATGTATCAATCAAC+TGG | + | chr4.1:38642454-38642473 | MS.gene08600:CDS | 30.0% | |
| TATGCCTACATTATTACATC+CGG | - | chr4.1:38643334-38643353 | None:intergenic | 30.0% | |
| TCAATCAACTGGTAATTGAA+GGG | + | chr4.1:38642465-38642484 | MS.gene08600:intron | 30.0% | |
| TCACACAAATTATTTCCCAA+AGG | + | chr4.1:38641027-38641046 | MS.gene08600:CDS | 30.0% | |
| TCCATCTATTAAGGAGTTAA+AGG | + | chr4.1:38641200-38641219 | MS.gene08600:intron | 30.0% | |
| TCGATAATGTTCTTCATTTC+AGG | + | chr4.1:38644948-38644967 | MS.gene08600:intron | 30.0% | |
| TCTGAAAAGAGTTGAGAAAA+TGG | - | chr4.1:38640254-38640273 | None:intergenic | 30.0% | |
| TCTGTTATAATGAATGATCC+AGG | + | chr4.1:38641306-38641325 | MS.gene08600:intron | 30.0% | |
| TCTTTCTTAATAATTCTCCC+CGG | - | chr4.1:38645668-38645687 | None:intergenic | 30.0% | |
| TGATAACATATCCAAACAGA+AGG | - | chr4.1:38641720-38641739 | None:intergenic | 30.0% | |
| TGGCTCATTATAATTGTAGT+GGG | + | chr4.1:38646317-38646336 | MS.gene08600:intron | 30.0% | |
| TTACCAGTTGATTGATACAT+AGG | - | chr4.1:38642460-38642479 | None:intergenic | 30.0% | |
| TTACTCTACTTTACTTGGTT+TGG | + | chr4.1:38641939-38641958 | MS.gene08600:intron | 30.0% | |
| TTGAAATTCAGTGACTTTCA+TGG | + | chr4.1:38640660-38640679 | MS.gene08600:intron | 30.0% | |
| TTGATTCCTTAGTTTATAGC+TGG | + | chr4.1:38643566-38643585 | MS.gene08600:intron | 30.0% | |
| TTGGCTCATTATAATTGTAG+TGG | + | chr4.1:38646316-38646335 | MS.gene08600:intron | 30.0% | |
| TTGTGTTACATCATGCAAAT+TGG | - | chr4.1:38646159-38646178 | None:intergenic | 30.0% | |
| ! | AAATAAACCCTTAATTTGGG+AGG | - | chr4.1:38644168-38644187 | None:intergenic | 30.0% |
| ! | ACTGACAAGATAGAATTTTG+TGG | + | chr4.1:38643830-38643849 | MS.gene08600:intron | 30.0% |
| ! | AGGGTATCATGATCATAAAA+AGG | + | chr4.1:38645378-38645397 | MS.gene08600:intron | 30.0% |
| ! | ATAGTCTCACAACAAACTTT+TGG | - | chr4.1:38644212-38644231 | None:intergenic | 30.0% |
| ! | ATGTGTCAATCTAGTGATTT+TGG | - | chr4.1:38644463-38644482 | None:intergenic | 30.0% |
| ! | CAACTAGTTATGAGCATTTT+TGG | - | chr4.1:38642721-38642740 | None:intergenic | 30.0% |
| ! | CAATTTTTAAACGAGTCTTC+AGG | + | chr4.1:38642517-38642536 | MS.gene08600:intron | 30.0% |
| ! | CTATTTTCTATCAACTTGGT+TGG | + | chr4.1:38640895-38640914 | MS.gene08600:intron | 30.0% |
| ! | CTGACAAGATAGAATTTTGT+GGG | + | chr4.1:38643831-38643850 | MS.gene08600:intron | 30.0% |
| ! | GGTATTATTTATCTTTTGCC+GGG | - | chr4.1:38641141-38641160 | None:intergenic | 30.0% |
| ! | GTATTATTTATCTTTTGCCG+GGG | - | chr4.1:38641140-38641159 | None:intergenic | 30.0% |
| ! | TAAGAGAGTAATTTTGCATC+TGG | + | chr4.1:38644053-38644072 | MS.gene08600:intron | 30.0% |
| ! | TTTTTGTGTTTTTCCCCTTT+CGG | + | chr4.1:38646112-38646131 | MS.gene08600:intron | 30.0% |
| !! | AATTGATCTTTTGGTTACAG+GGG | + | chr4.1:38644829-38644848 | MS.gene08600:intron | 30.0% |
| !! | ATATTGATAACGTGGATGAT+TGG | + | chr4.1:38641872-38641891 | MS.gene08600:intron | 30.0% |
| !! | ATTGCAATTTTGATAACACC+GGG | + | chr4.1:38645647-38645666 | MS.gene08600:intron | 30.0% |
| !! | CAATTGATCTTTTGGTTACA+GGG | + | chr4.1:38644828-38644847 | MS.gene08600:intron | 30.0% |
| !! | CCCCTAATGTTTTTATATGA+AGG | - | chr4.1:38641343-38641362 | None:intergenic | 30.0% |
| !! | GAATGAATGTTTTCAAGATC+AGG | + | chr4.1:38645334-38645353 | MS.gene08600:intron | 30.0% |
| !! | GTTAACTTGTGGAAAAGTAT+GGG | + | chr4.1:38641528-38641547 | MS.gene08600:CDS | 30.0% |
| !! | TATTGATAACGTGGATGATT+GGG | + | chr4.1:38641873-38641892 | MS.gene08600:intron | 30.0% |
| !! | TCAATTGATCTTTTGGTTAC+AGG | + | chr4.1:38644827-38644846 | MS.gene08600:intron | 30.0% |
| !! | TGTTAACTTGTGGAAAAGTA+TGG | + | chr4.1:38641527-38641546 | MS.gene08600:CDS | 30.0% |
| !!! | AGTCTCTGTCATTTTCAAAT+TGG | + | chr4.1:38641166-38641185 | MS.gene08600:intron | 30.0% |
| !!! | CAATTTTGAGATTAAGGTAC+CGG | + | chr4.1:38645538-38645557 | MS.gene08600:intron | 30.0% |
| !!! | CTGTGACTAGTGTTTTTTAA+TGG | - | chr4.1:38642876-38642895 | None:intergenic | 30.0% |
| !!! | GTCTCTGTCATTTTCAAATT+GGG | + | chr4.1:38641167-38641186 | MS.gene08600:intron | 30.0% |
| !!! | TCTCTGTCATTTTCAAATTG+GGG | + | chr4.1:38641168-38641187 | MS.gene08600:intron | 30.0% |
| !!! | TTTTTTGTTTAGGTGAGGAA+TGG | + | chr4.1:38642552-38642571 | MS.gene08600:intron | 30.0% |
| AAAAATGACCTAGAATTGGG+AGG | + | chr4.1:38645418-38645437 | MS.gene08600:intron | 35.0% | |
| AAAATGACCTAGAATTGGGA+GGG | + | chr4.1:38645419-38645438 | MS.gene08600:intron | 35.0% | |
| AAACATGCTTAGCATGGAAA+TGG | - | chr4.1:38643287-38643306 | None:intergenic | 35.0% | |
| AAAGTTGTGAGAGACCAAAT+TGG | + | chr4.1:38641410-38641429 | MS.gene08600:intron | 35.0% | |
| AACAAAATCAACAAGCCGAA+AGG | - | chr4.1:38646130-38646149 | None:intergenic | 35.0% | |
| AACAAGATGTGGTGTACTAA+TGG | + | chr4.1:38643206-38643225 | MS.gene08600:CDS | 35.0% | |
| AAGTTGTGAGAGACCAAATT+GGG | + | chr4.1:38641411-38641430 | MS.gene08600:intron | 35.0% | |
| AATGAGCACAAGAAATGGTT+GGG | - | chr4.1:38642902-38642921 | None:intergenic | 35.0% | |
| ACAAAATCAACAAGCCGAAA+GGG | - | chr4.1:38646129-38646148 | None:intergenic | 35.0% | |
| ACAAGATGTGGTGTACTAAT+GGG | + | chr4.1:38643207-38643226 | MS.gene08600:CDS | 35.0% | |
| ACATGACTGCATAATACCAA+GGG | - | chr4.1:38644654-38644673 | None:intergenic | 35.0% | |
| ACATTATGTTGGCAATGCAT+AGG | - | chr4.1:38641782-38641801 | None:intergenic | 35.0% | |
| ACATTGCACATATCAGCAAT+AGG | - | chr4.1:38642686-38642705 | None:intergenic | 35.0% | |
| ACCCAAAAATGACCTAGAAT+TGG | + | chr4.1:38645414-38645433 | MS.gene08600:intron | 35.0% | |
| ACTAAGAAGAGTAGATCAGA+TGG | + | chr4.1:38645261-38645280 | MS.gene08600:intron | 35.0% | |
| ACTGCATTTATCATCGAGAA+GGG | + | chr4.1:38643452-38643471 | MS.gene08600:CDS | 35.0% | |
| AGCTGGAAAATATCCTTCTA+TGG | + | chr4.1:38643583-38643602 | MS.gene08600:intron | 35.0% | |
| AGTCATCCACTCTTGTAATT+TGG | + | chr4.1:38645723-38645742 | MS.gene08600:intron | 35.0% | |
| ATAAACTGAAACTCCCCAAT+AGG | - | chr4.1:38644725-38644744 | None:intergenic | 35.0% | |
| ATAATGAGCCAACATGATCT+TGG | - | chr4.1:38646308-38646327 | None:intergenic | 35.0% | |
| ATCAAGTTCATCCTTCTGTT+TGG | + | chr4.1:38641706-38641725 | MS.gene08600:intron | 35.0% | |
| ATCGAGATCCACTACATTTA+AGG | - | chr4.1:38640768-38640787 | None:intergenic | 35.0% | |
| ATGATAGCATTAGAGAGAGT+TGG | + | chr4.1:38645186-38645205 | MS.gene08600:intron | 35.0% | |
| ATGGGAGAATTTAATCTCCA+TGG | + | chr4.1:38641546-38641565 | MS.gene08600:CDS | 35.0% | |
| CACGCAATGCATAAGAAATA+TGG | - | chr4.1:38646068-38646087 | None:intergenic | 35.0% | |
| CACTATCTCATAGAGTATAC+AGG | - | chr4.1:38642048-38642067 | None:intergenic | 35.0% | |
| CATAACTAGTTGTAGCTTTC+AGG | + | chr4.1:38642729-38642748 | MS.gene08600:intron | 35.0% | |
| CATACTAATGTTTGAGCAGT+TGG | - | chr4.1:38643233-38643252 | None:intergenic | 35.0% | |
| CATAGTGTAACTGAATATGC+TGG | + | chr4.1:38641481-38641500 | MS.gene08600:intron | 35.0% | |
| CATTGCACATATCAGCAATA+GGG | - | chr4.1:38642685-38642704 | None:intergenic | 35.0% | |
| CCCAAAAATGACCTAGAATT+GGG | + | chr4.1:38645415-38645434 | MS.gene08600:intron | 35.0% | |
| CCCAGAAATTGGATAAACTA+GGG | + | chr4.1:38643729-38643748 | MS.gene08600:CDS | 35.0% | |
| CCCTAGTTTATCCAATTTCT+GGG | - | chr4.1:38643732-38643751 | None:intergenic | 35.0% | |
| CCCTTTAACTCCTTAATAGA+TGG | - | chr4.1:38641204-38641223 | None:intergenic | 35.0% | |
| CCTCACCTAAACAAAAAAGA+AGG | - | chr4.1:38642550-38642569 | None:intergenic | 35.0% | |
| CTGATCTACTCTTCTTAGTA+TGG | - | chr4.1:38645260-38645279 | None:intergenic | 35.0% | |
| CTTATGTGTATTCTGTAGCT+CGG | + | chr4.1:38644972-38644991 | MS.gene08600:CDS | 35.0% | |
| GAAAATGTTCTTGGGAAAGA+AGG | + | chr4.1:38643894-38643913 | MS.gene08600:CDS | 35.0% | |
| GCAGAAAAGACAAATTCACT+AGG | - | chr4.1:38643116-38643135 | None:intergenic | 35.0% | |
| GCTCAATATCACAAAACTTG+TGG | - | chr4.1:38643507-38643526 | None:intergenic | 35.0% | |
| GGAAAATTATGCAACTGGAA+AGG | - | chr4.1:38644442-38644461 | None:intergenic | 35.0% | |
| TAAAAGACCGCAATTGAAAC+CGG | - | chr4.1:38645560-38645579 | None:intergenic | 35.0% | |
| TAAAGAAAATACGGGAGACT+TGG | - | chr4.1:38641653-38641672 | None:intergenic | 35.0% | |
| TAATGAGCACAAGAAATGGT+TGG | - | chr4.1:38642903-38642922 | None:intergenic | 35.0% | |
| TACTAATTTCAGGATTGTGC+TGG | + | chr4.1:38646421-38646440 | MS.gene08600:intron | 35.0% | |
| TATCACAAAACTTGTGGTCA+AGG | - | chr4.1:38643501-38643520 | None:intergenic | 35.0% | |
| TCCCTAGTTTATCCAATTTC+TGG | - | chr4.1:38643733-38643752 | None:intergenic | 35.0% | |
| TCCGTAAGACTTAATTCAAC+TGG | + | chr4.1:38640562-38640581 | MS.gene08600:intron | 35.0% | |
| TGAATTAAGTCTTACGGACT+GGG | - | chr4.1:38640560-38640579 | None:intergenic | 35.0% | |
| TGATTGTGTTGAATTGCATC+AGG | + | chr4.1:38643385-38643404 | MS.gene08600:intron | 35.0% | |
| TGGGAGAATTTAATCTCCAT+GGG | + | chr4.1:38641547-38641566 | MS.gene08600:CDS | 35.0% | |
| TGGTTAAGGATTGTCAAAGT+TGG | + | chr4.1:38640582-38640601 | MS.gene08600:intron | 35.0% | |
| TGTCAGTAAAATCAAGTGGT+TGG | - | chr4.1:38643817-38643836 | None:intergenic | 35.0% | |
| TTATGTGTATTCTGTAGCTC+GGG | + | chr4.1:38644973-38644992 | MS.gene08600:CDS | 35.0% | |
| TTCAAGTACACTTCCATAGA+AGG | - | chr4.1:38643599-38643618 | None:intergenic | 35.0% | |
| TTGAATTAAGTCTTACGGAC+TGG | - | chr4.1:38640561-38640580 | None:intergenic | 35.0% | |
| ! | ACTCTTTTCCTCCCAAATTA+AGG | + | chr4.1:38644157-38644176 | MS.gene08600:intron | 35.0% |
| ! | CGTAAAATCGTGCGATTTTA+CGG | + | chr4.1:38645619-38645638 | MS.gene08600:intron | 35.0% |
| ! | CTCTTTTCCTCCCAAATTAA+GGG | + | chr4.1:38644158-38644177 | MS.gene08600:intron | 35.0% |
| ! | GAAAATGACAGAGACTAGTT+TGG | - | chr4.1:38641162-38641181 | None:intergenic | 35.0% |
| ! | GACAAACATCATTGATTGTC+AGG | - | chr4.1:38643693-38643712 | None:intergenic | 35.0% |
| ! | TAGTATTTTTCTCCCTTGTC+TGG | - | chr4.1:38641240-38641259 | None:intergenic | 35.0% |
| ! | TCTCATGTGCTACTAATTTC+AGG | + | chr4.1:38646411-38646430 | MS.gene08600:intron | 35.0% |
| !! | AAAACCACTTTTGCTTTGTC+AGG | + | chr4.1:38644527-38644546 | MS.gene08600:intron | 35.0% |
| !! | AAACCATTGATTTCTAAGGG+GGG | - | chr4.1:38645937-38645956 | None:intergenic | 35.0% |
| !! | AACTTTGAAGCTTATCTCTG+GGG | + | chr4.1:38642996-38643015 | MS.gene08600:intron | 35.0% |
| !! | AGCCAAACCATTGATTTCTA+AGG | - | chr4.1:38645941-38645960 | None:intergenic | 35.0% |
| !! | AGTTGGTAGTAGCACAAATT+AGG | + | chr4.1:38645203-38645222 | MS.gene08600:intron | 35.0% |
| !! | ATTATTTGGTAGTGCTCGTT+TGG | + | chr4.1:38643976-38643995 | MS.gene08600:intron | 35.0% |
| !! | CAAACCATTGATTTCTAAGG+GGG | - | chr4.1:38645938-38645957 | None:intergenic | 35.0% |
| !! | CAACTTTGAAGCTTATCTCT+GGG | + | chr4.1:38642995-38643014 | MS.gene08600:intron | 35.0% |
| !! | CCAAACCATTGATTTCTAAG+GGG | - | chr4.1:38645939-38645958 | None:intergenic | 35.0% |
| !! | GCCAAACCATTGATTTCTAA+GGG | - | chr4.1:38645940-38645959 | None:intergenic | 35.0% |
| !! | GTCAATCTCATTTTTGACCA+AGG | - | chr4.1:38640537-38640556 | None:intergenic | 35.0% |
| !! | GTTGGTAGTAGCACAAATTA+GGG | + | chr4.1:38645204-38645223 | MS.gene08600:intron | 35.0% |
| !! | TCAACTTTGAAGCTTATCTC+TGG | + | chr4.1:38642994-38643013 | MS.gene08600:intron | 35.0% |
| !! | TCCCAATTCTAGGTCATTTT+TGG | - | chr4.1:38645419-38645438 | None:intergenic | 35.0% |
| !! | TCCTGCTAAATTAGTTTGCA+CGG | + | chr4.1:38644922-38644941 | MS.gene08600:intron | 35.0% |
| !! | TTATAATTGTAGTGGGCTAG+TGG | + | chr4.1:38646324-38646343 | MS.gene08600:intron | 35.0% |
| !! | TTGCAATTTTGATAACACCG+GGG | + | chr4.1:38645648-38645667 | MS.gene08600:intron | 35.0% |
| !!! | ATTCTAGGTCATTTTTGGGT+AGG | - | chr4.1:38645414-38645433 | None:intergenic | 35.0% |
| !!! | CCCAATTCTAGGTCATTTTT+GGG | - | chr4.1:38645418-38645437 | None:intergenic | 35.0% |
| !!! | CCTTCTTTTTTGTTTAGGTG+AGG | + | chr4.1:38642547-38642566 | MS.gene08600:intron | 35.0% |
| !!! | CGGCTTGTTGATTTTGTTTT+TGG | + | chr4.1:38646132-38646151 | MS.gene08600:intron | 35.0% |
| !!! | TGCTGCCTTCTTTTTTGTTT+AGG | + | chr4.1:38642542-38642561 | MS.gene08600:intron | 35.0% |
| AAAACTGTCAGGGACCAAAT+TGG | - | chr4.1:38641099-38641118 | None:intergenic | 40.0% | |
| AAACGATCTTACTCGTTCCA+TGG | + | chr4.1:38645587-38645606 | MS.gene08600:intron | 40.0% | |
| AAACTGTCAGGGACCAAATT+GGG | - | chr4.1:38641098-38641117 | None:intergenic | 40.0% | |
| AAATGACCTAGAATTGGGAG+GGG | + | chr4.1:38645420-38645439 | MS.gene08600:intron | 40.0% | |
| AACACAAGTACAGTGTGTAG+TGG | + | chr4.1:38646172-38646191 | MS.gene08600:intron | 40.0% | |
| AACGATCTTACTCGTTCCAT+GGG | + | chr4.1:38645588-38645607 | MS.gene08600:intron | 40.0% | |
| AACTAGTTGTAGCTTTCAGG+TGG | + | chr4.1:38642732-38642751 | MS.gene08600:intron | 40.0% | |
| AACTTGAGCCAAGATCATGT+TGG | + | chr4.1:38646297-38646316 | MS.gene08600:intron | 40.0% | |
| AAGAAGAGTAGATCAGATGG+AGG | + | chr4.1:38645264-38645283 | MS.gene08600:intron | 40.0% | |
| AAGCTGATATGATGCAAGAG+AGG | - | chr4.1:38644255-38644274 | None:intergenic | 40.0% | |
| AAGGACTAGATTTCAAACCC+TGG | + | chr4.1:38642806-38642825 | MS.gene08600:intron | 40.0% | |
| AAGGTTCAGTACAATTACCC+AGG | - | chr4.1:38643482-38643501 | None:intergenic | 40.0% | |
| AATTCACTAGGCTAAGTCCT+TGG | - | chr4.1:38643104-38643123 | None:intergenic | 40.0% | |
| AATTCAGTGACTTTCATGGC+AGG | + | chr4.1:38640664-38640683 | MS.gene08600:intron | 40.0% | |
| AGAAGAGTAGATCAGATGGA+GGG | + | chr4.1:38645265-38645284 | MS.gene08600:intron | 40.0% | |
| ATAGCGAGGATGAGAAGAAT+TGG | - | chr4.1:38640278-38640297 | None:intergenic | 40.0% | |
| ATCAAGCTAGTAGTAGCAGT+AGG | - | chr4.1:38640389-38640408 | None:intergenic | 40.0% | |
| ATCAGGATCTTGCTTAGGAT+TGG | + | chr4.1:38645351-38645370 | MS.gene08600:intron | 40.0% | |
| ATCGAAGAGGAATGAAGTAG+TGG | - | chr4.1:38640314-38640333 | None:intergenic | 40.0% | |
| ATCGGAGTTCAAACTGGTTA+AGG | + | chr4.1:38640613-38640632 | MS.gene08600:intron | 40.0% | |
| ATCGTGCCCTTTGTATTGTA+TGG | + | chr4.1:38644787-38644806 | MS.gene08600:intron | 40.0% | |
| ATGAAGGACAAATTAGTCCC+TGG | - | chr4.1:38641327-38641346 | None:intergenic | 40.0% | |
| ATGGGGGATATGTACTTAAC+GGG | + | chr4.1:38643183-38643202 | MS.gene08600:CDS | 40.0% | |
| ATTAAGGAGTTAAAGGGCCA+AGG | + | chr4.1:38641207-38641226 | MS.gene08600:intron | 40.0% | |
| ATTCAGTACTGCCCAGAAAT+TGG | + | chr4.1:38643718-38643737 | MS.gene08600:CDS | 40.0% | |
| CAAAATCAACAAGCCGAAAG+GGG | - | chr4.1:38646128-38646147 | None:intergenic | 40.0% | |
| CAAGGTTCAAATCCAGACAA+GGG | + | chr4.1:38641225-38641244 | MS.gene08600:intron | 40.0% | |
| CACTGCATTTATCATCGAGA+AGG | + | chr4.1:38643451-38643470 | MS.gene08600:CDS | 40.0% | |
| CATGACTGCATAATACCAAG+GGG | - | chr4.1:38644653-38644672 | None:intergenic | 40.0% | |
| CATGTTGGTCATGGAATTGT+AGG | + | chr4.1:38641616-38641635 | MS.gene08600:intron | 40.0% | |
| CCCCTTAGAAATCAATGGTT+TGG | + | chr4.1:38645936-38645955 | MS.gene08600:intron | 40.0% | |
| CTAAGGGTTAAAGGAGTTGA+AGG | + | chr4.1:38642778-38642797 | MS.gene08600:intron | 40.0% | |
| CTACAATTCCATGACCAACA+TGG | - | chr4.1:38641618-38641637 | None:intergenic | 40.0% | |
| CTATGTCTGCTTATTTGCAG+AGG | + | chr4.1:38642331-38642350 | MS.gene08600:intron | 40.0% | |
| CTCTTTGTCGAACATAAGGA+AGG | - | chr4.1:38644688-38644707 | None:intergenic | 40.0% | |
| GACATGACTGCATAATACCA+AGG | - | chr4.1:38644655-38644674 | None:intergenic | 40.0% | |
| GAGATCCACTACATTTAAGG+CGG | - | chr4.1:38640765-38640784 | None:intergenic | 40.0% | |
| GATGGGGGATATGTACTTAA+CGG | + | chr4.1:38643182-38643201 | MS.gene08600:CDS | 40.0% | |
| GCCCAGAAATTGGATAAACT+AGG | + | chr4.1:38643728-38643747 | MS.gene08600:CDS | 40.0% | |
| GGTATGAGATTCTAATGCCA+TGG | + | chr4.1:38644889-38644908 | MS.gene08600:intron | 40.0% | |
| GTAGCACAAATTAGGGAGTT+TGG | + | chr4.1:38645211-38645230 | MS.gene08600:intron | 40.0% | |
| TACTTAACGGGAACAAGATG+TGG | + | chr4.1:38643195-38643214 | MS.gene08600:CDS | 40.0% | |
| TAGATTTCAAACCCTGGTGA+AGG | + | chr4.1:38642812-38642831 | MS.gene08600:intron | 40.0% | |
| TATGTGAACGAGTATCCAAC+CGG | + | chr4.1:38646517-38646536 | MS.gene08600:CDS | 40.0% | |
| TATTGGACGTGATCTCTTCA+AGG | + | chr4.1:38646606-38646625 | MS.gene08600:CDS | 40.0% | |
| TCAAAGTTGGATGCCTTCAT+CGG | + | chr4.1:38640595-38640614 | MS.gene08600:intron | 40.0% | |
| TCAAGATCAGGATCTTGCTT+AGG | + | chr4.1:38645346-38645365 | MS.gene08600:intron | 40.0% | |
| TCAAGCTAGTAGTAGCAGTA+GGG | - | chr4.1:38640388-38640407 | None:intergenic | 40.0% | |
| TCTTCTGATCTCACTTGTTC+CGG | - | chr4.1:38646581-38646600 | None:intergenic | 40.0% | |
| TGCTCTCTTTGTCGAACATA+AGG | - | chr4.1:38644692-38644711 | None:intergenic | 40.0% | |
| TGCTTATTTGCAGAGGAGTA+TGG | + | chr4.1:38642338-38642357 | MS.gene08600:intron | 40.0% | |
| TGGGGAGTTTCAGTTTATAC+AGG | + | chr4.1:38644727-38644746 | MS.gene08600:CDS | 40.0% | |
| TGGTTTGAGCTAAGGGTTAA+AGG | + | chr4.1:38642769-38642788 | MS.gene08600:intron | 40.0% | |
| TTCCGGAGGAAAATGTTCTT+GGG | + | chr4.1:38643886-38643905 | MS.gene08600:CDS | 40.0% | |
| TTGCAGGCGATACAATGTTT+AGG | + | chr4.1:38646484-38646503 | MS.gene08600:CDS | 40.0% | |
| TTTGTGCAAGTGAGTTTCAG+AGG | + | chr4.1:38640637-38640656 | MS.gene08600:intron | 40.0% | |
| ! | AGATCCACTACATTTAAGGC+GGG | - | chr4.1:38640764-38640783 | None:intergenic | 40.0% |
| ! | CAGTATTTTCTCCTTCACCA+GGG | - | chr4.1:38642826-38642845 | None:intergenic | 40.0% |
| ! | CTTCGAGAATTGCTTTGTTC+CGG | + | chr4.1:38643869-38643888 | MS.gene08600:CDS | 40.0% |
| ! | GAATTAAGTCTTACGGACTG+GGG | - | chr4.1:38640559-38640578 | None:intergenic | 40.0% |
| ! | GAATTTGTCTTTTCTGCAGC+TGG | + | chr4.1:38643119-38643138 | MS.gene08600:intron | 40.0% |
| ! | GAGGAATGAAGTAGTGGAAA+AGG | - | chr4.1:38640308-38640327 | None:intergenic | 40.0% |
| ! | TATTTGCAGAGGAGTATGGA+GGG | + | chr4.1:38642342-38642361 | MS.gene08600:intron | 40.0% |
| ! | TCAGTATTTTCTCCTTCACC+AGG | - | chr4.1:38642827-38642846 | None:intergenic | 40.0% |
| ! | TTATTTGCAGAGGAGTATGG+AGG | + | chr4.1:38642341-38642360 | MS.gene08600:intron | 40.0% |
| ! | TTCCCAAGAACATTTTCCTC+CGG | - | chr4.1:38643891-38643910 | None:intergenic | 40.0% |
| ! | TTTTGAGCGAACACCCAATT+TGG | + | chr4.1:38641082-38641101 | MS.gene08600:intron | 40.0% |
| !! | AAACTAGAGTGTCGAACCTT+TGG | - | chr4.1:38642606-38642625 | None:intergenic | 40.0% |
| !! | AGCTCAATTGGTTTGAGCTA+AGG | + | chr4.1:38642761-38642780 | MS.gene08600:intron | 40.0% |
| !! | GCTCAATTGGTTTGAGCTAA+GGG | + | chr4.1:38642762-38642781 | MS.gene08600:intron | 40.0% |
| !! | GGATCTGTTGGTCTTTCTTA+TGG | + | chr4.1:38642422-38642441 | MS.gene08600:CDS | 40.0% |
| !! | TAAGGTACCGGTTTCAATTG+CGG | + | chr4.1:38645550-38645569 | MS.gene08600:intron | 40.0% |
| AAAGCTGATCGTGTAGATGG+GGG | + | chr4.1:38643167-38643186 | MS.gene08600:CDS | 45.0% | |
| AAGCTAGTAGTAGCAGTAGG+GGG | - | chr4.1:38640386-38640405 | None:intergenic | 45.0% | |
| AATGACCTAGAATTGGGAGG+GGG | + | chr4.1:38645421-38645440 | MS.gene08600:intron | 45.0% | |
| ACACCCCCCTTAGAAATCAA+TGG | + | chr4.1:38645931-38645950 | MS.gene08600:intron | 45.0% | |
| ACCAGTTTGAACTCCGATGA+AGG | - | chr4.1:38640611-38640630 | None:intergenic | 45.0% | |
| ACTAGGTGGAGTCAGATACA+TGG | - | chr4.1:38646005-38646024 | None:intergenic | 45.0% | |
| AGCAGGAGAAAATAGCACCA+TGG | - | chr4.1:38644909-38644928 | None:intergenic | 45.0% | |
| AGCCACTCACTAAGAACGTA+AGG | + | chr4.1:38644339-38644358 | MS.gene08600:intron | 45.0% | |
| ATCTCGATCCGAGTTTCAGA+TGG | + | chr4.1:38640780-38640799 | MS.gene08600:intron | 45.0% | |
| ATGTATCTGACTCCACCTAG+TGG | + | chr4.1:38646004-38646023 | MS.gene08600:intron | 45.0% | |
| CAAAAACAGACGCAACAGCA+GGG | + | chr4.1:38643417-38643436 | MS.gene08600:CDS | 45.0% | |
| CAAAGCTGATCGTGTAGATG+GGG | + | chr4.1:38643166-38643185 | MS.gene08600:CDS | 45.0% | |
| CAACCAAGATTTGTCCCACT+AGG | - | chr4.1:38646022-38646041 | None:intergenic | 45.0% | |
| CAACGGAAAAGTTGACCCAA+AGG | + | chr4.1:38645003-38645022 | MS.gene08600:CDS | 45.0% | |
| CAAGCTAGTAGTAGCAGTAG+GGG | - | chr4.1:38640387-38640406 | None:intergenic | 45.0% | |
| CACATATCAGCAATAGGGCA+AGG | - | chr4.1:38642680-38642699 | None:intergenic | 45.0% | |
| CAGGCGATACAATGTTTAGG+TGG | + | chr4.1:38646487-38646506 | MS.gene08600:CDS | 45.0% | |
| CCAAGGTTCAAATCCAGACA+AGG | + | chr4.1:38641224-38641243 | MS.gene08600:intron | 45.0% | |
| CCTTGTCTGGATTTGAACCT+TGG | - | chr4.1:38641227-38641246 | None:intergenic | 45.0% | |
| CTATGTCATGATGTCTGGAC+TGG | + | chr4.1:38644598-38644617 | MS.gene08600:CDS | 45.0% | |
| CTTCGATGACACTCAGATAC+AGG | + | chr4.1:38640327-38640346 | MS.gene08600:CDS | 45.0% | |
| CTTTCCCGCCTTAAATGTAG+TGG | + | chr4.1:38640757-38640776 | MS.gene08600:intron | 45.0% | |
| GACACCTGACAAAGCAAAAG+TGG | - | chr4.1:38644534-38644553 | None:intergenic | 45.0% | |
| GCAAAGCTGATCGTGTAGAT+GGG | + | chr4.1:38643165-38643184 | MS.gene08600:CDS | 45.0% | |
| GCCGTGCAAACTAATTTAGC+AGG | - | chr4.1:38644926-38644945 | None:intergenic | 45.0% | |
| GGAGTCTATGTCATGATGTC+TGG | + | chr4.1:38644593-38644612 | MS.gene08600:intron | 45.0% | |
| GGGACAAATCTTGGTTGTTG+TGG | + | chr4.1:38646025-38646044 | MS.gene08600:intron | 45.0% | |
| GTATCTGAGTGTCATCGAAG+AGG | - | chr4.1:38640327-38640346 | None:intergenic | 45.0% | |
| GTCCTTACGTTCTTAGTGAG+TGG | - | chr4.1:38644344-38644363 | None:intergenic | 45.0% | |
| GTTCCGGAGGAAAATGTTCT+TGG | + | chr4.1:38643885-38643904 | MS.gene08600:CDS | 45.0% | |
| GTTCGACAAAGAGAGCAGTT+CGG | + | chr4.1:38644695-38644714 | MS.gene08600:CDS | 45.0% | |
| GTTCTTGGGAAAGAAGGGAA+AGG | + | chr4.1:38643900-38643919 | MS.gene08600:CDS | 45.0% | |
| TGCAAAGCTGATCGTGTAGA+TGG | + | chr4.1:38643164-38643183 | MS.gene08600:CDS | 45.0% | |
| TGCTTAGCATGGAAATGGCA+TGG | - | chr4.1:38643282-38643301 | None:intergenic | 45.0% | |
| TGGGACAAACATGCTTAGCA+TGG | - | chr4.1:38643293-38643312 | None:intergenic | 45.0% | |
| TGTATCTGACTCCACCTAGT+GGG | + | chr4.1:38646005-38646024 | MS.gene08600:intron | 45.0% | |
| TTCATCAGCCCCTAGTGATT+AGG | - | chr4.1:38645294-38645313 | None:intergenic | 45.0% | |
| TTGGATAAACTAGGGATGCG+AGG | + | chr4.1:38643737-38643756 | MS.gene08600:CDS | 45.0% | |
| ! | AGCAACACAAGTTGCTTTGC+AGG | + | chr4.1:38646468-38646487 | MS.gene08600:CDS | 45.0% |
| ! | AGTTGTAGCTTTCAGGTGGT+TGG | + | chr4.1:38642736-38642755 | MS.gene08600:intron | 45.0% |
| ! | ATCAATGTGGGAAGCATGAG+GGG | - | chr4.1:38641008-38641027 | None:intergenic | 45.0% |
| ! | CATGATGTCTGGACTGGATT+TGG | + | chr4.1:38644604-38644623 | MS.gene08600:CDS | 45.0% |
| ! | CTTATCTCTGGGGATCATGT+GGG | + | chr4.1:38643006-38643025 | MS.gene08600:CDS | 45.0% |
| ! | CTTGCTTAGGATTGGCAAGA+GGG | + | chr4.1:38645359-38645378 | MS.gene08600:intron | 45.0% |
| ! | GATCAATGTGGGAAGCATGA+GGG | - | chr4.1:38641009-38641028 | None:intergenic | 45.0% |
| ! | GATTTCTAAGGGGGGTGTAT+TGG | - | chr4.1:38645929-38645948 | None:intergenic | 45.0% |
| ! | GGCTAACACCATCTGAAACT+CGG | - | chr4.1:38640791-38640810 | None:intergenic | 45.0% |
| ! | GTTGTAGCTTTCAGGTGGTT+GGG | + | chr4.1:38642737-38642756 | MS.gene08600:intron | 45.0% |
| ! | TAAGGGGGGTGTATTGGATT+GGG | - | chr4.1:38645923-38645942 | None:intergenic | 45.0% |
| ! | TCTTGCTTAGGATTGGCAAG+AGG | + | chr4.1:38645358-38645377 | MS.gene08600:intron | 45.0% |
| ! | TGATCAATGTGGGAAGCATG+AGG | - | chr4.1:38641010-38641029 | None:intergenic | 45.0% |
| ! | TGTCTGGACTGGATTTGGAA+AGG | + | chr4.1:38644609-38644628 | MS.gene08600:CDS | 45.0% |
| !! | AGATTTGAGGAGGCACCTTT+GGG | - | chr4.1:38645021-38645040 | None:intergenic | 45.0% |
| !! | GAGGGTATCCTAATCACTAG+GGG | + | chr4.1:38645283-38645302 | MS.gene08600:intron | 45.0% |
| !! | GGAGGGTATCCTAATCACTA+GGG | + | chr4.1:38645282-38645301 | MS.gene08600:intron | 45.0% |
| !! | TGGAGGGTATCCTAATCACT+AGG | + | chr4.1:38645281-38645300 | MS.gene08600:intron | 45.0% |
| !!! | GAAAGGCTTGTTTTAGCAGC+CGG | + | chr4.1:38644626-38644645 | MS.gene08600:CDS | 45.0% |
| AGCAGTTCGGTCGTCCTATT+GGG | + | chr4.1:38644708-38644727 | MS.gene08600:CDS | 50.0% | |
| AGCTAGTAGTAGCAGTAGGG+GGG | - | chr4.1:38640385-38640404 | None:intergenic | 50.0% | |
| AGGTGGTTGGGTAGCTCAAT+TGG | + | chr4.1:38642749-38642768 | MS.gene08600:intron | 50.0% | |
| ATCATCGAGAAGGGAATGCC+TGG | + | chr4.1:38643461-38643480 | MS.gene08600:CDS | 50.0% | |
| ATGCGAAGCTCTACGAGATC+GGG | + | chr4.1:38646554-38646573 | MS.gene08600:CDS | 50.0% | |
| CCAACATGGATGCTCACTCA+AGG | - | chr4.1:38641604-38641623 | None:intergenic | 50.0% | |
| CCAAGATTTGTCCCACTAGG+TGG | - | chr4.1:38646019-38646038 | None:intergenic | 50.0% | |
| CCACCTAGTGGGACAAATCT+TGG | + | chr4.1:38646016-38646035 | MS.gene08600:intron | 50.0% | |
| CCTTGAGTGAGCATCCATGT+TGG | + | chr4.1:38641601-38641620 | MS.gene08600:intron | 50.0% | |
| CTGCATAATACCAAGGGGAC+CGG | - | chr4.1:38644648-38644667 | None:intergenic | 50.0% | |
| CTTACTCGTTCCATGGGAGT+GGG | + | chr4.1:38645594-38645613 | MS.gene08600:intron | 50.0% | |
| GACCAACAGATCCTGAAGCT+CGG | - | chr4.1:38642415-38642434 | None:intergenic | 50.0% | |
| GAGCAGCGAGAAAACTGTCA+GGG | - | chr4.1:38641109-38641128 | None:intergenic | 50.0% | |
| GATGCGAAGCTCTACGAGAT+CGG | + | chr4.1:38646553-38646572 | MS.gene08600:CDS | 50.0% | |
| GCAAAAACAGACGCAACAGC+AGG | + | chr4.1:38643416-38643435 | MS.gene08600:CDS | 50.0% | |
| GCCTTCATCGGAGTTCAAAC+TGG | + | chr4.1:38640607-38640626 | MS.gene08600:intron | 50.0% | |
| GGTCTCTCACAACTTTCTCG+CGG | - | chr4.1:38641406-38641425 | None:intergenic | 50.0% | |
| GTGAGCATCCATGTTGGTCA+TGG | + | chr4.1:38641607-38641626 | MS.gene08600:intron | 50.0% | |
| GTTCTTAGTGAGTGGCTGAG+TGG | - | chr4.1:38644336-38644355 | None:intergenic | 50.0% | |
| TACCTGGTGCAGTAATCCCA+TGG | - | chr4.1:38641566-38641585 | None:intergenic | 50.0% | |
| TCATCGAGAAGGGAATGCCT+GGG | + | chr4.1:38643462-38643481 | MS.gene08600:CDS | 50.0% | |
| TCGCTGCTCAATTTAGTCCC+CGG | + | chr4.1:38641120-38641139 | MS.gene08600:intron | 50.0% | |
| TCTTACTCGTTCCATGGGAG+TGG | + | chr4.1:38645593-38645612 | MS.gene08600:intron | 50.0% | |
| TGAGCAGCGAGAAAACTGTC+AGG | - | chr4.1:38641110-38641129 | None:intergenic | 50.0% | |
| TTACTCGTTCCATGGGAGTG+GGG | + | chr4.1:38645595-38645614 | MS.gene08600:intron | 50.0% | |
| ! | ATTTTACGACCCCACTCCCA+TGG | - | chr4.1:38645607-38645626 | None:intergenic | 50.0% |
| ! | CGAGAATTGCTTTGTTCCGG+AGG | + | chr4.1:38643872-38643891 | MS.gene08600:CDS | 50.0% |
| ! | CTAAGGGGGGTGTATTGGAT+TGG | - | chr4.1:38645924-38645943 | None:intergenic | 50.0% |
| ! | GAAGAGATTAGCCGAGCTTC+AGG | + | chr4.1:38642401-38642420 | MS.gene08600:CDS | 50.0% |
| ! | GCTTATCTCTGGGGATCATG+TGG | + | chr4.1:38643005-38643024 | MS.gene08600:intron | 50.0% |
| !! | CAGATTTGAGGAGGCACCTT+TGG | - | chr4.1:38645022-38645041 | None:intergenic | 50.0% |
| AGCCGAGCTTCAGGATCTGT+TGG | + | chr4.1:38642410-38642429 | MS.gene08600:CDS | 55.0% | |
| CGTAGAGCTTCGCATCTCTG+AGG | - | chr4.1:38646549-38646568 | None:intergenic | 55.0% | |
| CTAGTAGTAGCAGTAGGGGG+GGG | - | chr4.1:38640383-38640402 | None:intergenic | 55.0% | |
| CTCCATGGGATTACTGCACC+AGG | + | chr4.1:38641561-38641580 | MS.gene08600:CDS | 55.0% | |
| GAAAAGGCAGCAGCATAGCG+AGG | - | chr4.1:38640292-38640311 | None:intergenic | 55.0% | |
| GACGCAACAGCAGGGTCAAA+AGG | + | chr4.1:38643425-38643444 | MS.gene08600:CDS | 55.0% | |
| GAGCAGTTCGGTCGTCCTAT+TGG | + | chr4.1:38644707-38644726 | MS.gene08600:CDS | 55.0% | |
| GCAGTTCGGTCGTCCTATTG+GGG | + | chr4.1:38644709-38644728 | MS.gene08600:CDS | 55.0% | |
| GCTAGTAGTAGCAGTAGGGG+GGG | - | chr4.1:38640384-38640403 | None:intergenic | 55.0% | |
| GTAGCTCGGGACTGTGACAA+CGG | + | chr4.1:38644986-38645005 | MS.gene08600:CDS | 55.0% | |
| TAGTAGTAGCAGTAGGGGGG+GGG | - | chr4.1:38640382-38640401 | None:intergenic | 55.0% | |
| TGCAACCCCCTCCCAATTCT+AGG | - | chr4.1:38645429-38645448 | None:intergenic | 55.0% | |
| TGCGAAGCTCTACGAGATCG+GGG | + | chr4.1:38646555-38646574 | MS.gene08600:CDS | 55.0% | |
| TGGGGATCATGTGGGAGCTT+TGG | + | chr4.1:38643014-38643033 | MS.gene08600:CDS | 55.0% | |
| ! | GAGTATGGAGGGCTTGGTCT+AGG | + | chr4.1:38642353-38642372 | MS.gene08600:CDS | 55.0% |
| AAGCTCTACGAGATCGGGGC+CGG | + | chr4.1:38646559-38646578 | MS.gene08600:CDS | 60.0% | |
| AGTAGTAGCAGTAGGGGGGG+GGG | - | chr4.1:38640381-38640400 | None:intergenic | 60.0% | |
| ! | CGCATCTCTGAGGAGACGAC+CGG | - | chr4.1:38646539-38646558 | None:intergenic | 60.0% |
| ! | GCAGAGGAGTATGGAGGGCT+TGG | + | chr4.1:38642347-38642366 | MS.gene08600:intron | 60.0% |
| ! | TCTCTGAGGAGACGACCGGT+TGG | - | chr4.1:38646535-38646554 | None:intergenic | 60.0% |
| !! | GTTTTAGCAGCCGGTCCCCT+TGG | + | chr4.1:38644635-38644654 | MS.gene08600:CDS | 60.0% |
| GTAGTAGCAGTAGGGGGGGG+GGG | - | chr4.1:38640380-38640399 | None:intergenic | 65.0% | |
| TAGTAGCAGTAGGGGGGGGG+GGG | - | chr4.1:38640379-38640398 | None:intergenic | 65.0% | |
| AGTAGCAGTAGGGGGGGGGG+GGG | - | chr4.1:38640378-38640397 | None:intergenic | 70.0% | |
| GTAGCAGTAGGGGGGGGGGG+GGG | - | chr4.1:38640377-38640396 | None:intergenic | 75.0% | |
| TAGCAGTAGGGGGGGGGGGG+GGG | - | chr4.1:38640376-38640395 | None:intergenic | 75.0% | |
| ! | AGCAGTAGGGGGGGGGGGGG+GGG | - | chr4.1:38640375-38640394 | None:intergenic | 80.0% |
| ! | AGTAGGGGGGGGGGGGGGGG+GGG | - | chr4.1:38640372-38640391 | None:intergenic | 85.0% |
| ! | CAGTAGGGGGGGGGGGGGGG+GGG | - | chr4.1:38640373-38640392 | None:intergenic | 85.0% |
| ! | GCAGTAGGGGGGGGGGGGGG+GGG | - | chr4.1:38640374-38640393 | None:intergenic | 85.0% |
| ! | GTAGGGGGGGGGGGGGGGGG+GGG | - | chr4.1:38640371-38640390 | None:intergenic | 90.0% |
| ! | TAGGGGGGGGGGGGGGGGGG+GGG | - | chr4.1:38640370-38640389 | None:intergenic | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr4.1:38640369-38640388 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 38640220 | 38646636 | 38640220 | ID=MS.gene08600 |
| chr4.1 | mRNA | 38640220 | 38646636 | 38640220 | ID=MS.gene08600.t1;Parent=MS.gene08600 |
| chr4.1 | exon | 38640220 | 38640348 | 38640220 | ID=MS.gene08600.t1.exon1;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38640220 | 38640348 | 38640220 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38640965 | 38641048 | 38640965 | ID=MS.gene08600.t1.exon2;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38640965 | 38641048 | 38640965 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38641525 | 38641582 | 38641525 | ID=MS.gene08600.t1.exon3;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38641525 | 38641582 | 38641525 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38642351 | 38642475 | 38642351 | ID=MS.gene08600.t1.exon4;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38642351 | 38642475 | 38642351 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38642564 | 38642608 | 38642564 | ID=MS.gene08600.t1.exon5;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38642564 | 38642608 | 38642564 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38643006 | 38643054 | 38643006 | ID=MS.gene08600.t1.exon6;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38643006 | 38643054 | 38643006 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38643138 | 38643247 | 38643138 | ID=MS.gene08600.t1.exon7;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38643138 | 38643247 | 38643138 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38643407 | 38643483 | 38643407 | ID=MS.gene08600.t1.exon8;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38643407 | 38643483 | 38643407 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38643718 | 38643768 | 38643718 | ID=MS.gene08600.t1.exon9;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38643718 | 38643768 | 38643718 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38643857 | 38643921 | 38643857 | ID=MS.gene08600.t1.exon10;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38643857 | 38643921 | 38643857 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38644594 | 38644748 | 38644594 | ID=MS.gene08600.t1.exon11;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38644594 | 38644748 | 38644594 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38644849 | 38644889 | 38644849 | ID=MS.gene08600.t1.exon12;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38644849 | 38644889 | 38644849 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38644970 | 38645024 | 38644970 | ID=MS.gene08600.t1.exon13;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38644970 | 38645024 | 38644970 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| chr4.1 | exon | 38646433 | 38646636 | 38646433 | ID=MS.gene08600.t1.exon14;Parent=MS.gene08600.t1 |
| chr4.1 | CDS | 38646433 | 38646636 | 38646433 | ID=cds.MS.gene08600.t1;Parent=MS.gene08600.t1 |
| Gene Sequence |
| Protein sequence |
