AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08648

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08648.t1 MTR_4g058970 99.173 846 7 0 1 846 1 846 0.0 1750
MS.gene08648.t1 MTR_2g094520 79.339 847 164 7 3 846 1 839 0.0 1413
MS.gene08648.t1 MTR_2g030130 69.560 841 235 8 19 846 4 836 0.0 1205
MS.gene08648.t1 MTR_2g101190 66.069 837 260 9 24 846 10 836 0.0 1132
MS.gene08648.t1 MTR_8g013980 65.161 841 263 12 21 846 7 832 0.0 1119
MS.gene08648.t1 MTR_3g109800 65.139 829 274 8 24 846 16 835 0.0 1116
MS.gene08648.t1 MTR_3g109800 65.641 780 254 7 24 797 16 787 0.0 1051
MS.gene08648.t1 MTR_3g109800 65.661 696 227 6 24 713 16 705 0.0 932
MS.gene08648.t1 MTR_3g109800 61.628 602 213 8 252 846 4 594 0.0 758
MS.gene08648.t1 MTR_2g101720 24.053 528 298 19 29 483 143 640 8.22e-23 105
MS.gene08648.t1 MTR_2g088470 21.739 690 371 24 8 595 50 672 1.41e-21 100
MS.gene08648.t1 MTR_7g427710 22.380 706 394 27 7 652 1 612 4.57e-19 92.4
MS.gene08648.t1 MTR_5g005600 21.039 751 415 29 32 685 52 721 9.60e-13 72.4
MS.gene08648.t1 MTR_4g047800 32.479 117 71 2 9 125 44 152 4.11e-12 70.5
MS.gene08648.t1 MTR_4g047800 22.244 499 287 16 212 681 304 730 6.20e-12 69.7
MS.gene08648.t1 MTR_6g477820 30.058 173 90 5 18 190 22 163 7.41e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08648.t1 AT5G60690 81.647 850 142 7 3 846 1 842 0.0 1438
MS.gene08648.t1 AT2G34710 68.913 846 236 11 19 846 16 852 0.0 1174
MS.gene08648.t1 AT1G30490 66.550 858 251 10 7 846 2 841 0.0 1159
MS.gene08648.t1 AT1G52150 67.223 839 245 11 24 846 13 837 0.0 1132
MS.gene08648.t1 AT1G52150 67.223 839 244 11 24 846 13 836 0.0 1131
MS.gene08648.t1 AT4G32880 64.734 845 269 15 17 846 3 833 0.0 1097
MS.gene08648.t1 AT1G52150 67.215 790 229 10 24 797 13 788 0.0 1061
MS.gene08648.t1 AT5G32670 67.143 70 23 0 292 361 37 106 3.92e-26 107
MS.gene08648.t1 AT1G79840 23.280 683 383 27 28 647 104 708 3.90e-25 112
MS.gene08648.t1 AT1G79840 23.280 683 383 27 28 647 46 650 4.16e-25 112
MS.gene08648.t1 AT1G79840 23.280 683 383 27 28 647 46 650 4.16e-25 112
MS.gene08648.t1 AT1G79840 23.280 683 383 27 28 647 133 737 5.44e-25 112
MS.gene08648.t1 AT1G79840 24.335 526 326 20 28 499 104 611 1.06e-23 107
MS.gene08648.t1 AT4G21750 23.664 524 298 23 195 684 306 761 1.47e-14 78.6
MS.gene08648.t1 AT4G21750 35.714 98 55 2 28 125 65 154 4.56e-12 70.5
MS.gene08648.t1 AT4G21750 23.664 524 298 23 195 684 306 761 1.47e-14 78.6
MS.gene08648.t1 AT4G21750 35.714 98 55 2 28 125 65 154 4.56e-12 70.5
MS.gene08648.t1 AT4G21750 23.664 524 298 23 195 684 306 761 1.47e-14 78.6
MS.gene08648.t1 AT4G21750 35.714 98 55 2 28 125 65 154 4.56e-12 70.5
MS.gene08648.t1 AT4G21750 23.664 524 298 23 195 684 306 761 1.47e-14 78.6
MS.gene08648.t1 AT4G21750 35.714 98 55 2 28 125 65 154 4.56e-12 70.5
MS.gene08648.t1 AT5G52170 24.737 380 230 12 29 371 61 421 3.43e-14 77.0
MS.gene08648.t1 AT5G52170 24.737 380 230 12 29 371 61 421 3.43e-14 77.0
MS.gene08648.t1 AT5G52170 24.737 380 230 12 29 371 61 421 4.10e-14 77.0
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.04e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.05e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.05e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.05e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.05e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.05e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.05e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.05e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.05e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.05e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.05e-11 69.3
MS.gene08648.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.97e-11 68.2
MS.gene08648.t1 AT1G73360 35.714 98 55 2 28 125 35 124 2.93e-11 67.8

Find 221 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTAATCAGTTACTATT+TGG 0.070575 4.1:+39367656 MS.gene08648:intron
TGGCTCCGGCCCGGGATTTC+TGG 0.116971 4.1:+39365240 MS.gene08648:CDS
TAGCTTTCTCTTTCATAAAT+TGG 0.177453 4.1:+39368268 MS.gene08648:CDS
CTCAATGGTTCCTCCATTTC+CGG 0.218751 4.1:-39365108 None:intergenic
AGAAGAGCTACTTAGATTCT+TGG 0.227127 4.1:-39366120 None:intergenic
TGAGCAGCAGCAGTTGAATT+AGG 0.229833 4.1:-39365428 None:intergenic
ACCAAGATAAACGATCTTTA+AGG 0.256930 4.1:-39365043 None:intergenic
CCTTTAATCAGTTACTATTT+GGG 0.264850 4.1:+39367657 MS.gene08648:intron
GAACGTTCCTCCAGCGGTTT+TGG 0.267801 4.1:+39366290 MS.gene08648:intron
TAGGGATATTCACCTGTTAC+AGG 0.269982 4.1:+39366705 MS.gene08648:CDS
AATGGATCTGCCAGAGTTAT+AGG 0.277310 4.1:+39367551 MS.gene08648:CDS
GAAACATTGTGAAAACTTCT+AGG 0.277838 4.1:-39365082 None:intergenic
GATGCTCCATTGGTGCCTTC+TGG 0.293806 4.1:+39367026 MS.gene08648:CDS
TGAGCTAGTGTAACTGCTTC+TGG 0.294323 4.1:-39367529 None:intergenic
GGCTTCAATGACGCTGTAAA+TGG 0.300316 4.1:+39366026 MS.gene08648:CDS
CTGAGATCAGATTCTCTTGT+TGG 0.314455 4.1:+39367690 MS.gene08648:CDS
GTGGCTACCTGCTCAATCTT+TGG 0.322456 4.1:-39365879 None:intergenic
GAAAGGTCCCTGTCTGGTTC+TGG 0.324143 4.1:+39365398 MS.gene08648:CDS
TGATTGCCAGTGAATCTTGT+AGG 0.327004 4.1:-39366417 None:intergenic
TGCAGATGCTTGAAGTTATT+AGG 0.332303 4.1:+39366641 MS.gene08648:intron
TGGCCAGCCTGGTCCGGATT+CGG 0.332357 4.1:+39364809 MS.gene08648:intron
GATAGGCACTTCGATATATT+AGG 0.337752 4.1:+39365782 MS.gene08648:intron
TAAAGTGGTCGTAGTACTTC+TGG 0.341715 4.1:-39365640 None:intergenic
TCAACACTGATCGGGTGTTT+TGG 0.344060 4.1:-39367342 None:intergenic
TCCCTGTCTGGTTCTGGCAC+TGG 0.345502 4.1:+39365404 MS.gene08648:CDS
GTTGATTGGGTCCAGATGCC+TGG 0.352645 4.1:+39364388 MS.gene08648:CDS
TCTGGGAACATTTCATCAAT+TGG 0.355893 4.1:-39367002 None:intergenic
CTTGAAGTTATTAGGCTTGA+AGG 0.356810 4.1:+39366649 MS.gene08648:CDS
GGGTTTGCTTATCTGCCAGC+TGG 0.357471 4.1:+39368153 MS.gene08648:CDS
GGCACCAATGGAGCATCATC+TGG 0.365656 4.1:-39367020 None:intergenic
TCTTAGATACACTACAACTT+TGG 0.376901 4.1:+39365265 MS.gene08648:CDS
TGGAGAACCAGGAGAAAGTT+TGG 0.380345 4.1:-39367509 None:intergenic
ATTGATAAGCATCTAGATTC+AGG 0.380570 4.1:+39363315 MS.gene08648:CDS
ACAATGTTTCCTGCCGGAAA+TGG 0.381342 4.1:+39365095 MS.gene08648:CDS
AGTATGGAATTTACCTTTGT+AGG 0.381444 4.1:-39364903 None:intergenic
CGGGCCGGAGCCAGCGTTGT+TGG 0.382892 4.1:-39365230 None:intergenic
TTCTCTTGGCCAGCCTGGTC+CGG 0.383123 4.1:+39364803 MS.gene08648:intron
GGTGAAGTGGTATACGGATT+AGG 0.388453 4.1:+39365826 MS.gene08648:CDS
AGTAAGGCATTACCTGTAAC+AGG 0.394026 4.1:-39366717 None:intergenic
ATCAAATAATCATGCCTCTT+GGG 0.394989 4.1:+39366436 MS.gene08648:CDS
AACCAAACCTTGATCTGTTT+AGG 0.396617 4.1:-39363465 None:intergenic
TCCTTAAAGATCGTTTATCT+TGG 0.397827 4.1:+39365042 MS.gene08648:CDS
CAAGGCTTCAAACTGTGAAT+AGG 0.399527 4.1:+39363628 MS.gene08648:CDS
GAAAGTTTGGCACCAACAGC+TGG 0.405904 4.1:-39367496 None:intergenic
AGACCTTCATCCCAGGCATC+TGG 0.407117 4.1:-39364399 None:intergenic
CAACAACGCTGGCTCCGGCC+CGG 0.411682 4.1:+39365231 MS.gene08648:CDS
AACAACGCTGGCTCCGGCCC+GGG 0.413344 4.1:+39365232 MS.gene08648:CDS
TCGAGTGGTGAAGTGGTATA+CGG 0.413960 4.1:+39365820 MS.gene08648:CDS
TAGATTCAGGGAAATATGTT+AGG 0.416438 4.1:+39363328 MS.gene08648:CDS
CTACAGGAACTGCTGTTGAT+TGG 0.418349 4.1:+39364374 MS.gene08648:CDS
TACAGGAACTGCTGTTGATT+GGG 0.419994 4.1:+39364375 MS.gene08648:CDS
GCAAAGATCCCAACCGAATC+CGG 0.421507 4.1:-39364822 None:intergenic
GAGCAGCAGCAGTTGAATTA+GGG 0.422108 4.1:-39365427 None:intergenic
GTTGGTGCCAAACTTTCTCC+TGG 0.425700 4.1:+39367502 MS.gene08648:CDS
TGTTGTCTTCTCATGGAACT+AGG 0.427476 4.1:-39363405 None:intergenic
GGGATCTGCATGTCGACAAT+GGG 0.430271 4.1:+39368174 MS.gene08648:CDS
CAGTGTCCGGTTTGTATTCA+CGG 0.430832 4.1:-39367254 None:intergenic
AACCTAAACAGATCAAGGTT+TGG 0.433904 4.1:+39363463 MS.gene08648:CDS
AATCAAATAATCATGCCTCT+TGG 0.435473 4.1:+39366435 MS.gene08648:CDS
AACCACCTGTTGCATTAACT+TGG 0.435864 4.1:-39368040 None:intergenic
CAATGAACAGTGTTATCTTC+TGG 0.436228 4.1:-39368243 None:intergenic
CACTGCCGTGAGTTGTCGTT+GGG 0.437038 4.1:-39367303 None:intergenic
GCAGGAACCTATGCCTATCC+AGG 0.445397 4.1:+39366387 MS.gene08648:CDS
GCAAGTTCCCTCACATTGCT+TGG 0.446182 4.1:+39366149 MS.gene08648:CDS
GATAAAATATTTGACGAGTC+TGG 0.446806 4.1:+39367991 MS.gene08648:CDS
GCAAGATAATGTTGTAATCA+TGG 0.449611 4.1:+39367399 MS.gene08648:CDS
AGCAAAGAAAAGAGGCTTCA+AGG 0.453264 4.1:+39363610 MS.gene08648:CDS
AATCAATTGTTGTCTTCTCA+TGG 0.455291 4.1:-39363412 None:intergenic
CTCTGTGCAGAGGGTTGCCA+TGG 0.455799 4.1:+39367450 MS.gene08648:CDS
GTTTATACCGGACGGAGAAA+TGG 0.458027 4.1:-39367473 None:intergenic
GCCATGGCCATTTCTCCGTC+CGG 0.458111 4.1:+39367466 MS.gene08648:CDS
AGCAATGTGAGGGAACTTGC+TGG 0.458432 4.1:-39366146 None:intergenic
GGTTCAATGTTGGAAAGAAT+AGG 0.460052 4.1:-39363444 None:intergenic
TGCTCCAACAACGCTGGCTC+CGG 0.460616 4.1:+39365226 MS.gene08648:CDS
CAGCCTGGTCCGGATTCGGT+TGG 0.460852 4.1:+39364813 MS.gene08648:intron
GTTTGTGAAAGGTCCCTGTC+TGG 0.462237 4.1:+39365392 MS.gene08648:CDS
AAGTCTCCTCCGCAATTGAT+AGG 0.463644 4.1:-39364330 None:intergenic
GGTCCAGATGCCTGGGATGA+AGG 0.464996 4.1:+39364396 MS.gene08648:CDS
AGCCTGGTCCGGATTCGGTT+GGG 0.465213 4.1:+39364814 MS.gene08648:intron
CATTGAACCTAAACAGATCA+AGG 0.465302 4.1:+39363458 MS.gene08648:CDS
TTTGGTATTGCAGTCGCAGC+CGG 0.467861 4.1:+39367894 MS.gene08648:intron
TGTTAGCACTTTCCATGCAA+TGG 0.472949 4.1:-39368220 None:intergenic
CTTCTCATGGAACTAGGCTT+AGG 0.473637 4.1:-39363399 None:intergenic
TATCTTGGTTTCGCGAGTGT+CGG 0.476648 4.1:+39365057 MS.gene08648:CDS
TGTAGACTTGCCTATAACTC+TGG 0.480673 4.1:-39367561 None:intergenic
TGTTGATGGAGGAAAATGAT+AGG 0.483631 4.1:+39363673 MS.gene08648:CDS
TACTGAACAAGTTGAAGCAT+TGG 0.483862 4.1:+39363356 MS.gene08648:CDS
ATCTAAGAGTCCAGAAATCC+CGG 0.484814 4.1:-39365250 None:intergenic
TCTTGCATAGTGCTGTCAAA+AGG 0.484830 4.1:-39367382 None:intergenic
AAGGGAACACCGCTCAGAAT+GGG 0.485855 4.1:+39366323 MS.gene08648:CDS
GCATCAGTATTTGCTGCTGA+TGG 0.488575 4.1:-39364148 None:intergenic
GTATTACTTCAAGATTTAAG+TGG 0.492819 4.1:-39365532 None:intergenic
AGAGATGCTACTAACCCTGC+TGG 0.494241 4.1:+39364211 MS.gene08648:CDS
ACCTTTGGTGATTCATAAAG+TGG 0.494265 4.1:-39365655 None:intergenic
GCACTGCCGTGAGTTGTCGT+TGG 0.495965 4.1:-39367304 None:intergenic
TCACAGCTTGTGTGTGAGAA+TGG 0.498450 4.1:+39363711 MS.gene08648:CDS
TGCAATGAACAAGTTGTTGA+TGG 0.500516 4.1:+39363659 MS.gene08648:CDS
CTGAATGTTCGCAAAACAGC+AGG 0.501563 4.1:-39365856 None:intergenic
TTTGTATTTGCAAATCAAGC+TGG 0.503494 4.1:+39367919 MS.gene08648:CDS
ATCCCAACCGAATCCGGACC+AGG 0.503586 4.1:-39364816 None:intergenic
TCAAGCTGGCCTTGACATGT+TGG 0.506180 4.1:+39367933 MS.gene08648:CDS
CTTGCATAGTGCTGTCAAAA+GGG 0.508484 4.1:-39367381 None:intergenic
GGCCAGTGCCAGAACCAGAC+AGG 0.510237 4.1:-39365406 None:intergenic
TAAGGGAACACCGCTCAGAA+TGG 0.510249 4.1:+39366322 MS.gene08648:CDS
GGTTTGCTTATCTGCCAGCT+GGG 0.514174 4.1:+39368154 MS.gene08648:CDS
ATATATTAGGCAAATAGCTC+AGG 0.515140 4.1:+39365795 MS.gene08648:CDS
ACAAGTTGAAGCATTGGAAA+GGG 0.515957 4.1:+39363362 MS.gene08648:CDS
AGGCAATAGTCAACACTGAT+CGG 0.516074 4.1:-39367351 None:intergenic
GAGTTCCTTTCAAAGGCTAC+AGG 0.517677 4.1:+39364358 MS.gene08648:CDS
GGCAATAGTCAACACTGATC+GGG 0.517701 4.1:-39367350 None:intergenic
TTGATTGGGTCCAGATGCCT+GGG 0.519139 4.1:+39364389 MS.gene08648:CDS
AAGCAGTTACACTAGCTCAA+TGG 0.520279 4.1:+39367533 MS.gene08648:CDS
TTCTTCTTGCAGATATGTAG+TGG 0.520407 4.1:+39366933 MS.gene08648:intron
ACCAACAGCTGGGTTTATAC+CGG 0.520732 4.1:-39367485 None:intergenic
GTCGACATGCAGATCCCAGC+TGG 0.520952 4.1:-39368168 None:intergenic
CGGACACTGGATTTGACGTC+AGG 0.521504 4.1:+39367268 MS.gene08648:CDS
CTTGCAGAACGTTCCTCCAG+CGG 0.526281 4.1:+39366284 MS.gene08648:intron
GATCTGTTTAGGTTCAATGT+TGG 0.526382 4.1:-39363454 None:intergenic
TGGGATCTGCATGTCGACAA+TGG 0.533448 4.1:+39368173 MS.gene08648:CDS
CATGGCTATGGCTATGGCTG+TGG 0.534941 4.1:+39363257 None:intergenic
CTGTGTGTAAATAAGCTCAA+TGG 0.538636 4.1:-39365123 None:intergenic
AAGAAACATGGCTATGGCTA+TGG 0.538767 4.1:+39363251 None:intergenic
ATGAGGCCTACAAGATTCAC+TGG 0.543583 4.1:+39366411 MS.gene08648:CDS
TTTGACAGAGTTCCTTTCAA+AGG 0.544138 4.1:+39364351 MS.gene08648:CDS
TTGATAAGCATCTAGATTCA+GGG 0.546019 4.1:+39363316 MS.gene08648:CDS
CGGAAACCAGAAGGCACCAA+TGG 0.546575 4.1:-39367032 None:intergenic
GTAACTGCTTCTGGAGAACC+AGG 0.547189 4.1:-39367520 None:intergenic
AGAGAAACTAGTAGCAGTGG+TGG 0.549453 4.1:+39363288 MS.gene08648:CDS
AATCTTGTAGGCCTCATCCC+TGG 0.549464 4.1:-39366405 None:intergenic
CAGTTCCTGTAGCCTTTGAA+AGG 0.551448 4.1:-39364363 None:intergenic
TGTGATTTCCTCTGTGCAGA+GGG 0.551770 4.1:+39367441 MS.gene08648:CDS
AACAAGTTGAAGCATTGGAA+AGG 0.552407 4.1:+39363361 MS.gene08648:CDS
AGGATGCCGTGAATACAAAC+CGG 0.553865 4.1:+39367248 MS.gene08648:CDS
ATGGTTCCTCCATTTCCGGC+AGG 0.554780 4.1:-39365104 None:intergenic
CTTTAATCAGTTACTATTTG+GGG 0.555387 4.1:+39367658 MS.gene08648:intron
CTGACGTCAAATCCAGTGTC+CGG 0.556266 4.1:-39367267 None:intergenic
AACAGCATAAAATCGCGTCC+TGG 0.557589 4.1:-39367743 None:intergenic
TTATGAATCACCAAAGGTGG+TGG 0.558033 4.1:+39365660 MS.gene08648:CDS
GAAACAACTGTGGCATCACC+AGG 0.558649 4.1:+39367725 MS.gene08648:CDS
GGACTGATGAGAACGCTGTT+GGG 0.559056 4.1:+39366955 MS.gene08648:CDS
TCTTCTTGCAGATATGTAGT+GGG 0.559916 4.1:+39366934 MS.gene08648:intron
CGTACGAGCAAGCCATTGCA+TGG 0.562208 4.1:+39368208 MS.gene08648:CDS
GCGATTTCACAAAGTTGTAG+TGG 0.563887 4.1:+39364843 MS.gene08648:CDS
TGTAGGCCTCATCCCTGGAT+AGG 0.565752 4.1:-39366400 None:intergenic
GTTCCCAGATGATGCTCCAT+TGG 0.566789 4.1:+39367016 MS.gene08648:CDS
TCCTGCTTTCAGTGATGCAG+CGG 0.568391 4.1:-39366370 None:intergenic
GGTCGAATCAAGTAGCCACT+CGG 0.568475 4.1:-39365473 None:intergenic
TAATAGTGAACTTACTGCAA+TGG 0.570234 4.1:-39365695 None:intergenic
ATTTGACGAGTCTGGTCGCA+AGG 0.571396 4.1:+39367999 MS.gene08648:CDS
TCCGCTGCATCACTGAAAGC+AGG 0.573762 4.1:+39366369 MS.gene08648:CDS
GTGTGATTTCCTCTGTGCAG+AGG 0.574274 4.1:+39367440 MS.gene08648:CDS
AAAGTTTGGCACCAACAGCT+GGG 0.574992 4.1:-39367495 None:intergenic
TTCACAAAGTTGTAGTGGAG+TGG 0.575629 4.1:+39364848 MS.gene08648:CDS
AGAAAGCGAACCAAAACCGC+TGG 0.578885 4.1:-39366300 None:intergenic
CCTCATCCCTGGATAGGCAT+AGG 0.580110 4.1:-39366394 None:intergenic
CATTCAGCCAAAGATTGAGC+AGG 0.580203 4.1:+39365872 MS.gene08648:CDS
ATGTTTCCTGCCGGAAATGG+AGG 0.580359 4.1:+39365098 MS.gene08648:CDS
TCCGGTATAAACCCAGCTGT+TGG 0.580698 4.1:+39367484 MS.gene08648:CDS
GCACCAATGGAGCATCATCT+GGG 0.585521 4.1:-39367019 None:intergenic
TAGAGAGAAGCAAAGAAAAG+AGG 0.587959 4.1:+39363602 MS.gene08648:CDS
AGTTCCCTCACATTGCTTGG+AGG 0.589621 4.1:+39366152 MS.gene08648:CDS
GTAAATGGATTCAGTGATGA+TGG 0.590567 4.1:+39366041 MS.gene08648:CDS
GTGAACCCAACGACAACTCA+CGG 0.590708 4.1:+39367298 MS.gene08648:CDS
AGCTTTACAAGACATTACAT+TGG 0.590794 4.1:+39367969 MS.gene08648:CDS
CGTGAATACAAACCGGACAC+TGG 0.591523 4.1:+39367255 MS.gene08648:CDS
GAGTTGTTTCCAACATGTCA+AGG 0.591719 4.1:-39367942 None:intergenic
GGGACTGATGAGAACGCTGT+TGG 0.594775 4.1:+39366954 MS.gene08648:CDS
GAACACAATTGAACATGAAG+AGG 0.595332 4.1:+39366458 MS.gene08648:CDS
AATCAGTTACTATTTGGGGA+CGG 0.595776 4.1:+39367662 MS.gene08648:intron
TGTTAGTTTAGAACCTACAA+AGG 0.596128 4.1:+39364890 MS.gene08648:CDS
AGGTTTGGTTCCAAAATCGA+AGG 0.597184 4.1:+39363478 MS.gene08648:CDS
ATTCGACCATGTGATGGTGG+CGG 0.598224 4.1:+39365488 MS.gene08648:CDS
TGTTCAATTGTGTTCCCAAG+AGG 0.599573 4.1:-39366450 None:intergenic
AAATAAGAGACCTTCATCCC+AGG 0.600192 4.1:-39364406 None:intergenic
TTGCAGACTCCTATCAATTG+CGG 0.602778 4.1:+39364321 MS.gene08648:intron
CATCTTCTTGAGCAAGAGAG+TGG 0.603372 4.1:-39366672 None:intergenic
GAGATGCTACTAACCCTGCT+GGG 0.605907 4.1:+39364212 MS.gene08648:CDS
GACATATGCTCCAACAACGC+TGG 0.606931 4.1:+39365220 MS.gene08648:intron
CATAGAGAAACTAGTAGCAG+TGG 0.608882 4.1:+39363285 MS.gene08648:CDS
GTCGAATCAAGTAGCCACTC+GGG 0.608954 4.1:-39365472 None:intergenic
TGATTTGCAAATACAAACAC+CGG 0.610151 4.1:-39367913 None:intergenic
AGTACTTCTGGCACACTCCA+CGG 0.612200 4.1:-39365628 None:intergenic
GGGATGATGCGGAAACCAGA+AGG 0.615520 4.1:-39367041 None:intergenic
TCAGGAATCGAGTGGTGAAG+TGG 0.617819 4.1:+39365813 MS.gene08648:CDS
GCCAGTGCCAGAACCAGACA+GGG 0.617845 4.1:-39365405 None:intergenic
TTGAATCTAATGGGATGATG+CGG 0.619863 4.1:-39367052 None:intergenic
GCATCTCTCTTAGAATTCTG+AGG 0.619916 4.1:-39364196 None:intergenic
CATTGAGCTTATTTACACAC+AGG 0.620551 4.1:+39365124 MS.gene08648:CDS
GAATTCCTCCAAGCAATGTG+AGG 0.621910 4.1:-39366157 None:intergenic
AGAGTCCAGAAATCCCGGGC+CGG 0.624215 4.1:-39365245 None:intergenic
CAGGAACCTATGCCTATCCA+GGG 0.626828 4.1:+39366388 MS.gene08648:CDS
CCTATGCCTATCCAGGGATG+AGG 0.627418 4.1:+39366394 MS.gene08648:CDS
ATGGATTCAGTGATGATGGT+TGG 0.628950 4.1:+39366045 MS.gene08648:CDS
TACACTACAACTTTGGACAA+TGG 0.630488 4.1:+39365272 MS.gene08648:CDS
CAGACTCCTATCAATTGCGG+AGG 0.631681 4.1:+39364324 MS.gene08648:intron
TACTTGATTCGACCATGTGA+TGG 0.633229 4.1:+39365482 MS.gene08648:CDS
TGTGGGAAGAAACATGGCTA+TGG 0.633966 4.1:+39363245 None:intergenic
AATTCCTCCAAGCAATGTGA+GGG 0.636010 4.1:-39366156 None:intergenic
GGAGTGGCAGCTCGAGCTTG+CGG 0.638597 4.1:+39364864 MS.gene08648:CDS
TTTGGACAATGGCAGTCTTG+TGG 0.639500 4.1:+39365283 MS.gene08648:CDS
ATTGAACCGCCACCATCACA+TGG 0.640356 4.1:-39365494 None:intergenic
TCTAAGAGTCCAGAAATCCC+GGG 0.642124 4.1:-39365249 None:intergenic
GATTTAAGTGGTCTACAATG+TGG 0.642422 4.1:-39365520 None:intergenic
ACCGGACGGAGAAATGGCCA+TGG 0.644894 4.1:-39367467 None:intergenic
AAGCGAACCAAAACCGCTGG+AGG 0.647188 4.1:-39366297 None:intergenic
TTGATTCGACCATGTGATGG+TGG 0.651436 4.1:+39365485 MS.gene08648:CDS
TGGTCTATACTGAACTGTGA+CGG 0.652371 4.1:+39366065 MS.gene08648:CDS
ACTTTATGAATCACCAAAGG+TGG 0.655976 4.1:+39365657 MS.gene08648:CDS
TCTGCATGTCGACAATGGGG+CGG 0.660182 4.1:+39368178 MS.gene08648:CDS
GCTGTCAAAAGGGAACTGAA+AGG 0.661239 4.1:-39367371 None:intergenic
ACAGCTGGGTTTATACCGGA+CGG 0.670270 4.1:-39367481 None:intergenic
GGATCTGCATGTCGACAATG+GGG 0.672158 4.1:+39368175 MS.gene08648:CDS
ACTGAACTGTGACGGCGCTG+AGG 0.673744 4.1:+39366073 MS.gene08648:CDS
ACCACTTTATGAATCACCAA+AGG 0.678609 4.1:+39365654 MS.gene08648:CDS
CAAATAGCTCAGGAATCGAG+TGG 0.680372 4.1:+39365805 MS.gene08648:CDS
TGTGTGAGAATGGATTTATG+AGG 0.695971 4.1:+39363721 MS.gene08648:CDS
AGAGCTGAAATGCTCCCGAG+TGG 0.713532 4.1:+39365458 MS.gene08648:CDS
AATGAACAAGTTGTTGATGG+AGG 0.713928 4.1:+39363662 MS.gene08648:CDS
CATGGCAACCCTCTGCACAG+AGG 0.723163 4.1:-39367449 None:intergenic
TGAAATCAGCCCATTCTGAG+CGG 0.726689 4.1:-39366332 None:intergenic
ACTTGATGCTGAAACAACTG+TGG 0.757022 4.1:+39367715 MS.gene08648:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTTAGTAGAAAAAACT+TGG - chr4.1:39364765-39364784 None:intergenic 15.0%
!! TAAACAAATATGATCAATAT+AGG + chr4.1:39366885-39366904 MS.gene08648:intron 15.0%
!! TCAATAATTTATCAATAGTA+AGG - chr4.1:39366736-39366755 None:intergenic 15.0%
!!! AAATTTGATTTCAAATGAAT+TGG - chr4.1:39364040-39364059 None:intergenic 15.0%
!!! ATATTGATGGATATTATATT+TGG + chr4.1:39364107-39364126 MS.gene08648:intron 15.0%
!!! ATTGGTTTATAAAATTGATT+CGG - chr4.1:39364022-39364041 None:intergenic 15.0%
!!! TTAGTTTTGTTTTGTTTTTT+TGG + chr4.1:39363559-39363578 MS.gene08648:intron 15.0%
!! AATATAGTAATCAATTGTAG+AGG - chr4.1:39363910-39363929 None:intergenic 20.0%
!! AATTTAATGCTAGAATTCAA+TGG + chr4.1:39363878-39363897 MS.gene08648:intron 20.0%
!! ATTGAATTCTAGCATTAAAT+TGG - chr4.1:39363879-39363898 None:intergenic 20.0%
!! TAATATATTACCGATAAATC+TGG - chr4.1:39366796-39366815 None:intergenic 20.0%
!! TACACAATAGAAAAAGAATT+AGG - chr4.1:39364296-39364315 None:intergenic 20.0%
!! TACTTAAAGAACTAAAATGA+AGG + chr4.1:39364578-39364597 MS.gene08648:intron 20.0%
!! TATATTATCTTCGGTAAAAA+TGG + chr4.1:39366809-39366828 MS.gene08648:intron 20.0%
!! TATCGGTAATATATTATCTT+CGG + chr4.1:39366800-39366819 MS.gene08648:intron 20.0%
!! TGTAATTCTATTTCATTGTA+CGG + chr4.1:39367781-39367800 MS.gene08648:intron 20.0%
!! TTAAAGACAATTGAAATTAG+TGG + chr4.1:39364673-39364692 MS.gene08648:intron 20.0%
!!! ATATACTTTAGAGACTTTAT+TGG - chr4.1:39364496-39364515 None:intergenic 20.0%
!!! ATGTTACTATTTTCTGTTTT+AGG + chr4.1:39367216-39367235 MS.gene08648:intron 20.0%
!!! TGATTTGTATATCAGTTTTT+TGG + chr4.1:39365975-39365994 MS.gene08648:intron 20.0%
!!! TGTTACTATTTTCTGTTTTA+GGG + chr4.1:39367217-39367236 MS.gene08648:intron 20.0%
!!! TTGGTTTATAAAATTGATTC+GGG - chr4.1:39364021-39364040 None:intergenic 20.0%
! AAGATATACATGATCTCATA+TGG - chr4.1:39365565-39365584 None:intergenic 25.0%
! AAGTTGTGTATACTTTGATT+AGG + chr4.1:39368131-39368150 MS.gene08648:intron 25.0%
! AGTTGTGTATACTTTGATTA+GGG + chr4.1:39368132-39368151 MS.gene08648:intron 25.0%
! CATACAAGAAATCATTTCAT+CGG - chr4.1:39366848-39366867 None:intergenic 25.0%
! CCAAATAGTAACTGATTAAA+GGG - chr4.1:39367659-39367678 None:intergenic 25.0%
! CCTTTAATCAGTTACTATTT+GGG + chr4.1:39367657-39367676 MS.gene08648:intron 25.0%
! CTTTAATCAGTTACTATTTG+GGG + chr4.1:39367658-39367677 MS.gene08648:intron 25.0%
! GAAGGATTTGATATTCTTTA+AGG + chr4.1:39364596-39364615 MS.gene08648:intron 25.0%
! GTATTACTTCAAGATTTAAG+TGG - chr4.1:39365535-39365554 None:intergenic 25.0%
! TAAAAACTAACATCCCAAAA+CGG - chr4.1:39366254-39366273 None:intergenic 25.0%
! TAGCTTTCTCTTTCATAAAT+TGG + chr4.1:39368268-39368287 MS.gene08648:CDS 25.0%
! TCTGCAATCTGTTAAAAAAT+CGG - chr4.1:39365020-39365039 None:intergenic 25.0%
! TTTATAAGTTTGAGCTTCAT+TGG + chr4.1:39363518-39363537 MS.gene08648:intron 25.0%
!! ACACTTAATTTGAGTAAATC+AGG - chr4.1:39367139-39367158 None:intergenic 25.0%
!! GATTAATGTGATTTTCTGTT+TGG + chr4.1:39367876-39367895 MS.gene08648:intron 25.0%
!! TCATGTCATAATTCTACTTT+TGG + chr4.1:39363781-39363800 MS.gene08648:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG + chr4.1:39363831-39363850 MS.gene08648:intron 25.0%
!!! AGTTTGTTGACTAATGTTAT+TGG + chr4.1:39365749-39365768 MS.gene08648:intron 25.0%
!!! CTTTTCTGAAAAAAGTCTAA+TGG + chr4.1:39367623-39367642 MS.gene08648:intron 25.0%
!!! GATTTTTTTTTCTGTCTTGA+AGG + chr4.1:39364267-39364286 MS.gene08648:intron 25.0%
!!! GTATACATTTGTTATTCTCT+TGG + chr4.1:39364789-39364808 MS.gene08648:intron 25.0%
!!! GTTACTATTTTCTGTTTTAG+GGG + chr4.1:39367218-39367237 MS.gene08648:intron 25.0%
!!! TAACTGGTTTTGAATCTAAT+GGG - chr4.1:39367064-39367083 None:intergenic 25.0%
!!! TATTTTGATTCCACTTTTGA+AGG + chr4.1:39365370-39365389 MS.gene08648:intron 25.0%
!!! TTAACTGGTTTTGAATCTAA+TGG - chr4.1:39367065-39367084 None:intergenic 25.0%
!!! TTACTATTTTCTGTTTTAGG+GGG + chr4.1:39367219-39367238 MS.gene08648:intron 25.0%
!!! TTAGTGCATTTTTGGTATTT+TGG - chr4.1:39364069-39364088 None:intergenic 25.0%
!!! TTTTAGTCTTTGCCATTAAA+AGG + chr4.1:39364527-39364546 MS.gene08648:intron 25.0%
AATCAAATAATCATGCCTCT+TGG + chr4.1:39366435-39366454 MS.gene08648:CDS 30.0%
AATCAATTGTTGTCTTCTCA+TGG - chr4.1:39363415-39363434 None:intergenic 30.0%
AATTCTATTTCATTGTACGG+TGG + chr4.1:39367784-39367803 MS.gene08648:intron 30.0%
ACAATTGAAATTAGTGGTCA+TGG + chr4.1:39364679-39364698 MS.gene08648:intron 30.0%
ACATTAATCTCGCGTTATAA+AGG - chr4.1:39367865-39367884 None:intergenic 30.0%
ACCAAAAATGCACTAAGTTA+AGG + chr4.1:39364073-39364092 MS.gene08648:intron 30.0%
ACCAAGATAAACGATCTTTA+AGG - chr4.1:39365046-39365065 None:intergenic 30.0%
AGCTTTACAAGACATTACAT+TGG + chr4.1:39367969-39367988 MS.gene08648:CDS 30.0%
AGGAAACAAATCATTTCATG+TGG - chr4.1:39365901-39365920 None:intergenic 30.0%
AGTATGGAATTTACCTTTGT+AGG - chr4.1:39364906-39364925 None:intergenic 30.0%
ATATATTAGGCAAATAGCTC+AGG + chr4.1:39365795-39365814 MS.gene08648:CDS 30.0%
ATCAAATAATCATGCCTCTT+GGG + chr4.1:39366436-39366455 MS.gene08648:CDS 30.0%
ATCAATATAGGTATGTACTG+AGG + chr4.1:39366897-39366916 MS.gene08648:intron 30.0%
ATCCATCAATATCAATTCCA+AGG - chr4.1:39364099-39364118 None:intergenic 30.0%
ATCTGGTGCATAGTAATAAA+AGG + chr4.1:39365321-39365340 MS.gene08648:intron 30.0%
ATTGATAAGCATCTAGATTC+AGG + chr4.1:39363315-39363334 MS.gene08648:CDS 30.0%
CAATAGAGAGGAAAAAAGAA+GGG - chr4.1:39367096-39367115 None:intergenic 30.0%
CCCAAATAGTAACTGATTAA+AGG - chr4.1:39367660-39367679 None:intergenic 30.0%
CCCTTTAATCAGTTACTATT+TGG + chr4.1:39367656-39367675 MS.gene08648:intron 30.0%
CTGCAATCTGTTAAAAAATC+GGG - chr4.1:39365019-39365038 None:intergenic 30.0%
CTTATGTTTAGAAAGGAAGT+TGG + chr4.1:39367818-39367837 MS.gene08648:intron 30.0%
GAAAAATTAGCTCAATAGAG+AGG - chr4.1:39367108-39367127 None:intergenic 30.0%
GAAACATTGTGAAAACTTCT+AGG - chr4.1:39365085-39365104 None:intergenic 30.0%
GATAAAATATTTGACGAGTC+TGG + chr4.1:39367991-39368010 MS.gene08648:CDS 30.0%
GCAAGATAATGTTGTAATCA+TGG + chr4.1:39367399-39367418 MS.gene08648:CDS 30.0%
GTAATCAATTGTAGAGGAAA+AGG - chr4.1:39363904-39363923 None:intergenic 30.0%
GTTGTGTATACTTTGATTAG+GGG + chr4.1:39368133-39368152 MS.gene08648:intron 30.0%
TAATAGTGAACTTACTGCAA+TGG - chr4.1:39365698-39365717 None:intergenic 30.0%
TAGATTCAGGGAAATATGTT+AGG + chr4.1:39363328-39363347 MS.gene08648:CDS 30.0%
TCAAATTAAGTGTCTTCCTA+TGG + chr4.1:39367146-39367165 MS.gene08648:intron 30.0%
TCAATAGAGAGGAAAAAAGA+AGG - chr4.1:39367097-39367116 None:intergenic 30.0%
TCAATTCACTTTGACATGAA+CGG + chr4.1:39363947-39363966 MS.gene08648:intron 30.0%
TCCTTAAAGATCGTTTATCT+TGG + chr4.1:39365042-39365061 MS.gene08648:CDS 30.0%
TCTTAGATACACTACAACTT+TGG + chr4.1:39365265-39365284 MS.gene08648:CDS 30.0%
TCTTTGCCATTAAAAGGTTA+GGG + chr4.1:39364533-39364552 MS.gene08648:intron 30.0%
TGATTTCTTGTATGTAGTTG+TGG + chr4.1:39366854-39366873 MS.gene08648:intron 30.0%
TTACATCTTATTCGGAAGTA+TGG - chr4.1:39364922-39364941 None:intergenic 30.0%
TTCGTACTAAATTTACAGCA+AGG - chr4.1:39364437-39364456 None:intergenic 30.0%
TTGATAAGCATCTAGATTCA+GGG + chr4.1:39363316-39363335 MS.gene08648:CDS 30.0%
TTTGTATTTGCAAATCAAGC+TGG + chr4.1:39367919-39367938 MS.gene08648:CDS 30.0%
! AGTGAAGATTTAACTTCATC+AGG - chr4.1:39366622-39366641 None:intergenic 30.0%
! AGTTGGAAGGTTTGTAATTT+TGG + chr4.1:39367835-39367854 MS.gene08648:intron 30.0%
! ATTGGAGAGAGTCATATTTT+AGG - chr4.1:39364478-39364497 None:intergenic 30.0%
! CCACACTTTTACATCTTATT+CGG - chr4.1:39364930-39364949 None:intergenic 30.0%
! GATTTTATGCTGTTCATTGA+AGG + chr4.1:39367752-39367771 MS.gene08648:CDS 30.0%
! GCATTATTCATGTTAAGTTG+AGG - chr4.1:39368067-39368086 None:intergenic 30.0%
! GTTTTCAATACCTTCGATTT+TGG - chr4.1:39363491-39363510 None:intergenic 30.0%
! TGATTTGCAAATACAAACAC+CGG - chr4.1:39367916-39367935 None:intergenic 30.0%
! TGTTAGTTTAGAACCTACAA+AGG + chr4.1:39364890-39364909 MS.gene08648:CDS 30.0%
! TTATGTAAGAAGAGGTTGAT+AGG - chr4.1:39366767-39366786 None:intergenic 30.0%
! TTGGAGAGAGTCATATTTTA+GGG - chr4.1:39364477-39364496 None:intergenic 30.0%
!! AAGAAGATGCTTTTGTTTCT+AGG + chr4.1:39366686-39366705 MS.gene08648:CDS 30.0%
!! ATCGAAGGTATTGAAAACTT+TGG + chr4.1:39363493-39363512 MS.gene08648:intron 30.0%
!! GAAATGATTTGTTTCCTTGA+AGG + chr4.1:39365904-39365923 MS.gene08648:intron 30.0%
!! TATGTAAGAAGAGGTTGATA+GGG - chr4.1:39366766-39366785 None:intergenic 30.0%
!! TGTCATAATTCTACTTTTGG+AGG + chr4.1:39363784-39363803 MS.gene08648:intron 30.0%
!!! AGAAGATGCTTTTGTTTCTA+GGG + chr4.1:39366687-39366706 MS.gene08648:CDS 30.0%
!!! TTTGGTGTTTAATGTTTTGC+AGG + chr4.1:39363577-39363596 MS.gene08648:intron 30.0%
AACCAAACCTTGATCTGTTT+AGG - chr4.1:39363468-39363487 None:intergenic 35.0%
AACCTAAACAGATCAAGGTT+TGG + chr4.1:39363463-39363482 MS.gene08648:CDS 35.0%
AATCAGTTACTATTTGGGGA+CGG + chr4.1:39367662-39367681 MS.gene08648:intron 35.0%
AATTAAGTGTCTTCCTATGG+CGG + chr4.1:39367149-39367168 MS.gene08648:intron 35.0%
ACCACTTTATGAATCACCAA+AGG + chr4.1:39365654-39365673 MS.gene08648:CDS 35.0%
ACTTTATGAATCACCAAAGG+TGG + chr4.1:39365657-39365676 MS.gene08648:CDS 35.0%
AGAAGAGCTACTTAGATTCT+TGG - chr4.1:39366123-39366142 None:intergenic 35.0%
AGAAGGGAACAAAACTTAAC+TGG - chr4.1:39367080-39367099 None:intergenic 35.0%
ATAAGCTGAGCCAGATTTAT+CGG + chr4.1:39366783-39366802 MS.gene08648:intron 35.0%
CAAATCTGAAGGTTACACAA+AGG - chr4.1:39365195-39365214 None:intergenic 35.0%
CAATGAACAGTGTTATCTTC+TGG - chr4.1:39368246-39368265 None:intergenic 35.0%
CACTATACATAGCATGCTAA+TGG - chr4.1:39366544-39366563 None:intergenic 35.0%
CATTGAACCTAAACAGATCA+AGG + chr4.1:39363458-39363477 MS.gene08648:CDS 35.0%
CATTGAGCTTATTTACACAC+AGG + chr4.1:39365124-39365143 MS.gene08648:CDS 35.0%
CCGAATAAGATGTAAAAGTG+TGG + chr4.1:39364927-39364946 MS.gene08648:intron 35.0%
CTGTGTGTAAATAAGCTCAA+TGG - chr4.1:39365126-39365145 None:intergenic 35.0%
CTTGAAGTTATTAGGCTTGA+AGG + chr4.1:39366649-39366668 MS.gene08648:CDS 35.0%
CTTTCACAAACCTTCAAAAG+TGG - chr4.1:39365383-39365402 None:intergenic 35.0%
GAACACAATTGAACATGAAG+AGG + chr4.1:39366458-39366477 MS.gene08648:CDS 35.0%
GATAGGCACTTCGATATATT+AGG + chr4.1:39365782-39365801 MS.gene08648:intron 35.0%
GATTTAAGTGGTCTACAATG+TGG - chr4.1:39365523-39365542 None:intergenic 35.0%
GGTGGTTCTTATGTTTAGAA+AGG + chr4.1:39367811-39367830 MS.gene08648:intron 35.0%
GGTTCAATGTTGGAAAGAAT+AGG - chr4.1:39363447-39363466 None:intergenic 35.0%
GTCTTTGCCATTAAAAGGTT+AGG + chr4.1:39364532-39364551 MS.gene08648:intron 35.0%
TACACTACAACTTTGGACAA+TGG + chr4.1:39365272-39365291 MS.gene08648:CDS 35.0%
TAGAGAGAAGCAAAGAAAAG+AGG + chr4.1:39363602-39363621 MS.gene08648:CDS 35.0%
TATGCTGTTCATTGAAGGTA+TGG + chr4.1:39367757-39367776 MS.gene08648:intron 35.0%
TATGTCTGTAGCAAATCTGA+AGG - chr4.1:39365206-39365225 None:intergenic 35.0%
TCAAAATGTCTTCAGTGTTG+TGG + chr4.1:39366515-39366534 MS.gene08648:intron 35.0%
TCTGGGAACATTTCATCAAT+TGG - chr4.1:39367005-39367024 None:intergenic 35.0%
TCTTCTTGCAGATATGTAGT+GGG + chr4.1:39366934-39366953 MS.gene08648:intron 35.0%
TGCAATGAACAAGTTGTTGA+TGG + chr4.1:39363659-39363678 MS.gene08648:CDS 35.0%
TGCAGATGCTTGAAGTTATT+AGG + chr4.1:39366641-39366660 MS.gene08648:intron 35.0%
TGTTTAGAAAGGAAGTTGGA+AGG + chr4.1:39367822-39367841 MS.gene08648:intron 35.0%
TTCTTCTTGCAGATATGTAG+TGG + chr4.1:39366933-39366952 MS.gene08648:intron 35.0%
TTGAATCTAATGGGATGATG+CGG - chr4.1:39367055-39367074 None:intergenic 35.0%
TTGCATACTGTAAGTGTATG+AGG + chr4.1:39363750-39363769 MS.gene08648:intron 35.0%
TTTGACAGAGTTCCTTTCAA+AGG + chr4.1:39364351-39364370 MS.gene08648:CDS 35.0%
TTTGATGAACTCAACTTGCA+TGG - chr4.1:39364978-39364997 None:intergenic 35.0%
! AATGAACAAGTTGTTGATGG+AGG + chr4.1:39363662-39363681 MS.gene08648:CDS 35.0%
! AATTAGTGGTCATGGCTTTT+AGG + chr4.1:39364687-39364706 MS.gene08648:intron 35.0%
! ACCTTTGGTGATTCATAAAG+TGG - chr4.1:39365658-39365677 None:intergenic 35.0%
! ATTTTCAACAGTGTCCGTTT+TGG + chr4.1:39366237-39366256 MS.gene08648:intron 35.0%
! GATCTGTTTAGGTTCAATGT+TGG - chr4.1:39363457-39363476 None:intergenic 35.0%
! GCCTTAACTTAGTGCATTTT+TGG - chr4.1:39364077-39364096 None:intergenic 35.0%
! GTAAATGGATTCAGTGATGA+TGG + chr4.1:39366041-39366060 MS.gene08648:CDS 35.0%
! GTTAGTCCCTAACCTTTTAA+TGG - chr4.1:39364542-39364561 None:intergenic 35.0%
! TACTGAACAAGTTGAAGCAT+TGG + chr4.1:39363356-39363375 MS.gene08648:CDS 35.0%
! TGTGTGAGAATGGATTTATG+AGG + chr4.1:39363721-39363740 MS.gene08648:CDS 35.0%
! TGTTGATGGAGGAAAATGAT+AGG + chr4.1:39363673-39363692 MS.gene08648:CDS 35.0%
! TTATTCTTGTCTTTTAGCCG+TGG + chr4.1:39365611-39365630 MS.gene08648:intron 35.0%
! TTTTCAACAGTGTCCGTTTT+GGG + chr4.1:39366238-39366257 MS.gene08648:intron 35.0%
! TTTTGCCAAGTTAATGCAAC+AGG + chr4.1:39368035-39368054 MS.gene08648:CDS 35.0%
!! AACAAGTTGAAGCATTGGAA+AGG + chr4.1:39363361-39363380 MS.gene08648:CDS 35.0%
!! ACAAGTTGAAGCATTGGAAA+GGG + chr4.1:39363362-39363381 MS.gene08648:CDS 35.0%
!! CACTTTTGAAGGTTTGTGAA+AGG + chr4.1:39365381-39365400 MS.gene08648:intron 35.0%
!! CATAATTCTACTTTTGGAGG+AGG + chr4.1:39363787-39363806 MS.gene08648:intron 35.0%
!! CTATGCCGATTTGAAAATGA+AGG + chr4.1:39364739-39364758 MS.gene08648:intron 35.0%
!! CTTGGCCTTCATTTTCAAAT+CGG - chr4.1:39364747-39364766 None:intergenic 35.0%
!! TTATTGGTGCCTTTTGTGAT+AGG + chr4.1:39365765-39365784 MS.gene08648:intron 35.0%
AAATAAGAGACCTTCATCCC+AGG - chr4.1:39364409-39364428 None:intergenic 40.0%
AAATCGATAGACCAGAACTG+TGG - chr4.1:39365940-39365959 None:intergenic 40.0%
AACCACCTGTTGCATTAACT+TGG - chr4.1:39368043-39368062 None:intergenic 40.0%
AAGCAGTTACACTAGCTCAA+TGG + chr4.1:39367533-39367552 MS.gene08648:CDS 40.0%
AAGCCTAAAAATTACCCAGC+AGG - chr4.1:39364229-39364248 None:intergenic 40.0%
AAGGTTAGGGACTAACATAG+CGG + chr4.1:39364546-39364565 MS.gene08648:intron 40.0%
AATCGATAGACCAGAACTGT+GGG - chr4.1:39365939-39365958 None:intergenic 40.0%
AATGCACTAAGTTAAGGCCT+TGG + chr4.1:39364079-39364098 MS.gene08648:intron 40.0%
AATGGATCTGCCAGAGTTAT+AGG + chr4.1:39367551-39367570 MS.gene08648:CDS 40.0%
AATTCCTCCAAGCAATGTGA+GGG - chr4.1:39366159-39366178 None:intergenic 40.0%
ACTTGATGCTGAAACAACTG+TGG + chr4.1:39367715-39367734 MS.gene08648:CDS 40.0%
AGCAAAGAAAAGAGGCTTCA+AGG + chr4.1:39363610-39363629 MS.gene08648:CDS 40.0%
AGCCTAAAAATTACCCAGCA+GGG - chr4.1:39364228-39364247 None:intergenic 40.0%
AGGCAATAGTCAACACTGAT+CGG - chr4.1:39367354-39367373 None:intergenic 40.0%
ATCTAAGAGTCCAGAAATCC+CGG - chr4.1:39365253-39365272 None:intergenic 40.0%
CAAGGCTTCAAACTGTGAAT+AGG + chr4.1:39363628-39363647 MS.gene08648:CDS 40.0%
CATAGAGAAACTAGTAGCAG+TGG + chr4.1:39363285-39363304 MS.gene08648:CDS 40.0%
CTGAGATCAGATTCTCTTGT+TGG + chr4.1:39367690-39367709 MS.gene08648:CDS 40.0%
CTGATGTATTACATCTGCAG+AGG + chr4.1:39366005-39366024 MS.gene08648:intron 40.0%
CTTGCATAGTGCTGTCAAAA+GGG - chr4.1:39367384-39367403 None:intergenic 40.0%
GCATCTCTCTTAGAATTCTG+AGG - chr4.1:39364199-39364218 None:intergenic 40.0%
GCGATTTCACAAAGTTGTAG+TGG + chr4.1:39364843-39364862 MS.gene08648:CDS 40.0%
GGCCTTGGAATTGATATTGA+TGG + chr4.1:39364094-39364113 MS.gene08648:intron 40.0%
TAAAGTGGTCGTAGTACTTC+TGG - chr4.1:39365643-39365662 None:intergenic 40.0%
TAGGGATATTCACCTGTTAC+AGG + chr4.1:39366705-39366724 MS.gene08648:CDS 40.0%
TCTATTTCATTGTACGGTGG+CGG + chr4.1:39367787-39367806 MS.gene08648:intron 40.0%
TCTTGCATAGTGCTGTCAAA+AGG - chr4.1:39367385-39367404 None:intergenic 40.0%
TGATTGCCAGTGAATCTTGT+AGG - chr4.1:39366420-39366439 None:intergenic 40.0%
TGGTCTATACTGAACTGTGA+CGG + chr4.1:39366065-39366084 MS.gene08648:CDS 40.0%
TGTAGACTTGCCTATAACTC+TGG - chr4.1:39367564-39367583 None:intergenic 40.0%
TGTTAGCACTTTCCATGCAA+TGG - chr4.1:39368223-39368242 None:intergenic 40.0%
TGTTCAATTGTGTTCCCAAG+AGG - chr4.1:39366453-39366472 None:intergenic 40.0%
TGTTGTCTTCTCATGGAACT+AGG - chr4.1:39363408-39363427 None:intergenic 40.0%
TTATGAATCACCAAAGGTGG+TGG + chr4.1:39365660-39365679 MS.gene08648:CDS 40.0%
TTGCAGACTCCTATCAATTG+CGG + chr4.1:39364321-39364340 MS.gene08648:intron 40.0%
! AACCCTGCTGGGTAATTTTT+AGG + chr4.1:39364223-39364242 MS.gene08648:intron 40.0%
! AGGTTTGGTTCCAAAATCGA+AGG + chr4.1:39363478-39363497 MS.gene08648:CDS 40.0%
! AGTAAGGCATTACCTGTAAC+AGG - chr4.1:39366720-39366739 None:intergenic 40.0%
! ATCGAAGTGCCTATCACAAA+AGG - chr4.1:39365777-39365796 None:intergenic 40.0%
! GAGTTGTTTCCAACATGTCA+AGG - chr4.1:39367945-39367964 None:intergenic 40.0%
! GCGGATGAATGTGATGATTT+TGG + chr4.1:39367168-39367187 MS.gene08648:intron 40.0%
! GGTGAGTATGTTTTGTCATC+TGG + chr4.1:39365304-39365323 MS.gene08648:intron 40.0%
! GTTTTCACAATGTTTCCTGC+CGG + chr4.1:39365089-39365108 MS.gene08648:CDS 40.0%
! TACAGGAACTGCTGTTGATT+GGG + chr4.1:39364375-39364394 MS.gene08648:CDS 40.0%
! TACTTGATTCGACCATGTGA+TGG + chr4.1:39365482-39365501 MS.gene08648:CDS 40.0%
! TTCACAAAGTTGTAGTGGAG+TGG + chr4.1:39364848-39364867 MS.gene08648:CDS 40.0%
!! AATTCTACTTTTGGAGGAGG+CGG + chr4.1:39363790-39363809 MS.gene08648:intron 40.0%
!! ATGGATTCAGTGATGATGGT+TGG + chr4.1:39366045-39366064 MS.gene08648:CDS 40.0%
!!! ATTTTTTGAGCCACCACCTT+TGG - chr4.1:39365673-39365692 None:intergenic 40.0%
!!! GGTTTTGGTTCGCTTTCTAA+GGG + chr4.1:39366305-39366324 MS.gene08648:CDS 40.0%
!!! TCTGTTTTAGGGGGATAAGA+AGG + chr4.1:39367228-39367247 MS.gene08648:intron 40.0%
AAAGTTTGGCACCAACAGCT+GGG - chr4.1:39367498-39367517 None:intergenic 45.0%
AACAGCATAAAATCGCGTCC+TGG - chr4.1:39367746-39367765 None:intergenic 45.0%
AAGTCTCCTCCGCAATTGAT+AGG - chr4.1:39364333-39364352 None:intergenic 45.0%
ACAATGTTTCCTGCCGGAAA+TGG + chr4.1:39365095-39365114 MS.gene08648:CDS 45.0%
ACCAACAGCTGGGTTTATAC+CGG - chr4.1:39367488-39367507 None:intergenic 45.0%
AGAGAAACTAGTAGCAGTGG+TGG + chr4.1:39363288-39363307 MS.gene08648:CDS 45.0%
ATGAGGCCTACAAGATTCAC+TGG + chr4.1:39366411-39366430 MS.gene08648:CDS 45.0%
CAAATAGCTCAGGAATCGAG+TGG + chr4.1:39365805-39365824 MS.gene08648:CDS 45.0%
CAGTTCCTGTAGCCTTTGAA+AGG - chr4.1:39364366-39364385 None:intergenic 45.0%
CATCTTCTTGAGCAAGAGAG+TGG - chr4.1:39366675-39366694 None:intergenic 45.0%
CATTCAGCCAAAGATTGAGC+AGG + chr4.1:39365872-39365891 MS.gene08648:CDS 45.0%
CTACAGGAACTGCTGTTGAT+TGG + chr4.1:39364374-39364393 MS.gene08648:CDS 45.0%
CTCAATGGTTCCTCCATTTC+CGG - chr4.1:39365111-39365130 None:intergenic 45.0%
CTGAATGTTCGCAAAACAGC+AGG - chr4.1:39365859-39365878 None:intergenic 45.0%
CTTCTCATGGAACTAGGCTT+AGG - chr4.1:39363402-39363421 None:intergenic 45.0%
GAATTCCTCCAAGCAATGTG+AGG - chr4.1:39366160-39366179 None:intergenic 45.0%
GAGCAGCAGCAGTTGAATTA+GGG - chr4.1:39365430-39365449 None:intergenic 45.0%
GAGTTCCTTTCAAAGGCTAC+AGG + chr4.1:39364358-39364377 MS.gene08648:CDS 45.0%
GCTGTCAAAAGGGAACTGAA+AGG - chr4.1:39367374-39367393 None:intergenic 45.0%
GGCAATAGTCAACACTGATC+GGG - chr4.1:39367353-39367372 None:intergenic 45.0%
GGCTCAGCTTATGTAAGAAG+AGG - chr4.1:39366775-39366794 None:intergenic 45.0%
GGCTTCAATGACGCTGTAAA+TGG + chr4.1:39366026-39366045 MS.gene08648:CDS 45.0%
GGTGAAGTGGTATACGGATT+AGG + chr4.1:39365826-39365845 MS.gene08648:CDS 45.0%
GTTTATACCGGACGGAGAAA+TGG - chr4.1:39367476-39367495 None:intergenic 45.0%
TATCTTGGTTTCGCGAGTGT+CGG + chr4.1:39365057-39365076 MS.gene08648:CDS 45.0%
TCACAGCTTGTGTGTGAGAA+TGG + chr4.1:39363711-39363730 MS.gene08648:CDS 45.0%
TCATCACATTCATCCGCCAT+AGG - chr4.1:39367165-39367184 None:intergenic 45.0%
TCGAGTGGTGAAGTGGTATA+CGG + chr4.1:39365820-39365839 MS.gene08648:CDS 45.0%
TCTAAGAGTCCAGAAATCCC+GGG - chr4.1:39365252-39365271 None:intergenic 45.0%
TGAAATCAGCCCATTCTGAG+CGG - chr4.1:39366335-39366354 None:intergenic 45.0%
TGAGCAGCAGCAGTTGAATT+AGG - chr4.1:39365431-39365450 None:intergenic 45.0%
TGAGCTAGTGTAACTGCTTC+TGG - chr4.1:39367532-39367551 None:intergenic 45.0%
TGCCAAGTTAATGCAACAGG+TGG + chr4.1:39368038-39368057 MS.gene08648:intron 45.0%
TGGAGAACCAGGAGAAAGTT+TGG - chr4.1:39367512-39367531 None:intergenic 45.0%
TGTGATTTCCTCTGTGCAGA+GGG + chr4.1:39367441-39367460 MS.gene08648:CDS 45.0%
TTTGGACAATGGCAGTCTTG+TGG + chr4.1:39365283-39365302 MS.gene08648:CDS 45.0%
! GCATCAGTATTTGCTGCTGA+TGG - chr4.1:39364151-39364170 None:intergenic 45.0%
! TCAACACTGATCGGGTGTTT+TGG - chr4.1:39367345-39367364 None:intergenic 45.0%
! TTGATTCGACCATGTGATGG+TGG + chr4.1:39365485-39365504 MS.gene08648:CDS 45.0%
!!! CGGTTTTGGTTCGCTTTCTA+AGG + chr4.1:39366304-39366323 MS.gene08648:CDS 45.0%
AAGGGAACACCGCTCAGAAT+GGG + chr4.1:39366323-39366342 MS.gene08648:CDS 50.0%
AATCTTGTAGGCCTCATCCC+TGG - chr4.1:39366408-39366427 None:intergenic 50.0%
ACAGCTGGGTTTATACCGGA+CGG - chr4.1:39367484-39367503 None:intergenic 50.0%
AGAAAGCGAACCAAAACCGC+TGG - chr4.1:39366303-39366322 None:intergenic 50.0%
AGAGATGCTACTAACCCTGC+TGG + chr4.1:39364211-39364230 MS.gene08648:CDS 50.0%
AGCAATGTGAGGGAACTTGC+TGG - chr4.1:39366149-39366168 None:intergenic 50.0%
AGTACTTCTGGCACACTCCA+CGG - chr4.1:39365631-39365650 None:intergenic 50.0%
AGTTCCCTCACATTGCTTGG+AGG + chr4.1:39366152-39366171 MS.gene08648:CDS 50.0%
ATGTTTCCTGCCGGAAATGG+AGG + chr4.1:39365098-39365117 MS.gene08648:CDS 50.0%
ATTGAACCGCCACCATCACA+TGG - chr4.1:39365497-39365516 None:intergenic 50.0%
ATTTGACGAGTCTGGTCGCA+AGG + chr4.1:39367999-39368018 MS.gene08648:CDS 50.0%
CAGACTCCTATCAATTGCGG+AGG + chr4.1:39364324-39364343 MS.gene08648:intron 50.0%
CAGGAACCTATGCCTATCCA+GGG + chr4.1:39366388-39366407 MS.gene08648:CDS 50.0%
CTGACGTCAAATCCAGTGTC+CGG - chr4.1:39367270-39367289 None:intergenic 50.0%
GAAACAACTGTGGCATCACC+AGG + chr4.1:39367725-39367744 MS.gene08648:CDS 50.0%
GAAAGTTTGGCACCAACAGC+TGG - chr4.1:39367499-39367518 None:intergenic 50.0%
GACATATGCTCCAACAACGC+TGG + chr4.1:39365220-39365239 MS.gene08648:intron 50.0%
GAGATGCTACTAACCCTGCT+GGG + chr4.1:39364212-39364231 MS.gene08648:CDS 50.0%
GCAAAGATCCCAACCGAATC+CGG - chr4.1:39364825-39364844 None:intergenic 50.0%
GCAAGTTCCCTCACATTGCT+TGG + chr4.1:39366149-39366168 MS.gene08648:CDS 50.0%
GGACTGATGAGAACGCTGTT+GGG + chr4.1:39366955-39366974 MS.gene08648:CDS 50.0%
GGATCTGCATGTCGACAATG+GGG + chr4.1:39368175-39368194 MS.gene08648:CDS 50.0%
GGGATCTGCATGTCGACAAT+GGG + chr4.1:39368174-39368193 MS.gene08648:CDS 50.0%
GGTCGAATCAAGTAGCCACT+CGG - chr4.1:39365476-39365495 None:intergenic 50.0%
GTCGAATCAAGTAGCCACTC+GGG - chr4.1:39365475-39365494 None:intergenic 50.0%
GTGAACCCAACGACAACTCA+CGG + chr4.1:39367298-39367317 MS.gene08648:CDS 50.0%
GTGGCTACCTGCTCAATCTT+TGG - chr4.1:39365882-39365901 None:intergenic 50.0%
GTGTGATTTCCTCTGTGCAG+AGG + chr4.1:39367440-39367459 MS.gene08648:CDS 50.0%
GTTCCCAGATGATGCTCCAT+TGG + chr4.1:39367016-39367035 MS.gene08648:CDS 50.0%
GTTTGTGAAAGGTCCCTGTC+TGG + chr4.1:39365392-39365411 MS.gene08648:CDS 50.0%
TAAGGGAACACCGCTCAGAA+TGG + chr4.1:39366322-39366341 MS.gene08648:CDS 50.0%
TCAGGAATCGAGTGGTGAAG+TGG + chr4.1:39365813-39365832 MS.gene08648:CDS 50.0%
TCCGGTATAAACCCAGCTGT+TGG + chr4.1:39367484-39367503 MS.gene08648:CDS 50.0%
TCCTGCTTTCAGTGATGCAG+CGG - chr4.1:39366373-39366392 None:intergenic 50.0%
TGGGATCTGCATGTCGACAA+TGG + chr4.1:39368173-39368192 MS.gene08648:CDS 50.0%
TGTTATTCTCTTGGCCAGCC+TGG + chr4.1:39364798-39364817 MS.gene08648:intron 50.0%
TTGATTGGGTCCAGATGCCT+GGG + chr4.1:39364389-39364408 MS.gene08648:CDS 50.0%
TTTGGTATTGCAGTCGCAGC+CGG + chr4.1:39367894-39367913 MS.gene08648:intron 50.0%
! ATTTCATTGTACGGTGGCGG+AGG + chr4.1:39367790-39367809 MS.gene08648:intron 50.0%
! GCACCAATGGAGCATCATCT+GGG - chr4.1:39367022-39367041 None:intergenic 50.0%
! GGTTTGCTTATCTGCCAGCT+GGG + chr4.1:39368154-39368173 MS.gene08648:CDS 50.0%
! GTAACTGCTTCTGGAGAACC+AGG - chr4.1:39367523-39367542 None:intergenic 50.0%
!! ATTCGACCATGTGATGGTGG+CGG + chr4.1:39365488-39365507 MS.gene08648:CDS 50.0%
!! GTTGGTGCCAAACTTTCTCC+TGG + chr4.1:39367502-39367521 MS.gene08648:CDS 50.0%
!! TCAAGCTGGCCTTGACATGT+TGG + chr4.1:39367933-39367952 MS.gene08648:CDS 50.0%
AAGCGAACCAAAACCGCTGG+AGG - chr4.1:39366300-39366319 None:intergenic 55.0%
AGACCTTCATCCCAGGCATC+TGG - chr4.1:39364402-39364421 None:intergenic 55.0%
AGAGCTGAAATGCTCCCGAG+TGG + chr4.1:39365458-39365477 MS.gene08648:CDS 55.0%
ATGGTTCCTCCATTTCCGGC+AGG - chr4.1:39365107-39365126 None:intergenic 55.0%
CACTGCCGTGAGTTGTCGTT+GGG - chr4.1:39367306-39367325 None:intergenic 55.0%
CCTATGCCTATCCAGGGATG+AGG + chr4.1:39366394-39366413 MS.gene08648:CDS 55.0%
CCTCATCCCTGGATAGGCAT+AGG - chr4.1:39366397-39366416 None:intergenic 55.0%
CGGACACTGGATTTGACGTC+AGG + chr4.1:39367268-39367287 MS.gene08648:CDS 55.0%
CGTACGAGCAAGCCATTGCA+TGG + chr4.1:39368208-39368227 MS.gene08648:CDS 55.0%
CTTGCAGAACGTTCCTCCAG+CGG + chr4.1:39366284-39366303 MS.gene08648:intron 55.0%
GCAGGAACCTATGCCTATCC+AGG + chr4.1:39366387-39366406 MS.gene08648:CDS 55.0%
GGGACTGATGAGAACGCTGT+TGG + chr4.1:39366954-39366973 MS.gene08648:CDS 55.0%
GGGATGATGCGGAAACCAGA+AGG - chr4.1:39367044-39367063 None:intergenic 55.0%
GTCATACGTGCCCACAGTTC+TGG + chr4.1:39365926-39365945 MS.gene08648:intron 55.0%
GTGGGCACGTATGACCTTCA+AGG - chr4.1:39365921-39365940 None:intergenic 55.0%
GTTGATTGGGTCCAGATGCC+TGG + chr4.1:39364388-39364407 MS.gene08648:CDS 55.0%
TCCGCTGCATCACTGAAAGC+AGG + chr4.1:39366369-39366388 MS.gene08648:CDS 55.0%
TCTGCATGTCGACAATGGGG+CGG + chr4.1:39368178-39368197 MS.gene08648:CDS 55.0%
TGTAGGCCTCATCCCTGGAT+AGG - chr4.1:39366403-39366422 None:intergenic 55.0%
! GAAAGGTCCCTGTCTGGTTC+TGG + chr4.1:39365398-39365417 MS.gene08648:CDS 55.0%
! GAACGTTCCTCCAGCGGTTT+TGG + chr4.1:39366290-39366309 MS.gene08648:intron 55.0%
! GATGCTCCATTGGTGCCTTC+TGG + chr4.1:39367026-39367045 MS.gene08648:CDS 55.0%
! GGCACCAATGGAGCATCATC+TGG - chr4.1:39367023-39367042 None:intergenic 55.0%
! GGGTTTGCTTATCTGCCAGC+TGG + chr4.1:39368153-39368172 MS.gene08648:CDS 55.0%
!! CGGAAACCAGAAGGCACCAA+TGG - chr4.1:39367035-39367054 None:intergenic 55.0%
ACCGGACGGAGAAATGGCCA+TGG - chr4.1:39367470-39367489 None:intergenic 60.0%
ACTGAACTGTGACGGCGCTG+AGG + chr4.1:39366073-39366092 MS.gene08648:CDS 60.0%
AGAGTCCAGAAATCCCGGGC+CGG - chr4.1:39365248-39365267 None:intergenic 60.0%
ATCCCAACCGAATCCGGACC+AGG - chr4.1:39364819-39364838 None:intergenic 60.0%
CATGGCAACCCTCTGCACAG+AGG - chr4.1:39367452-39367471 None:intergenic 60.0%
CTCTGTGCAGAGGGTTGCCA+TGG + chr4.1:39367450-39367469 MS.gene08648:CDS 60.0%
GCACTGCCGTGAGTTGTCGT+TGG - chr4.1:39367307-39367326 None:intergenic 60.0%
GCCAGTGCCAGAACCAGACA+GGG - chr4.1:39365408-39365427 None:intergenic 60.0%
GCCATGGCCATTTCTCCGTC+CGG + chr4.1:39367466-39367485 MS.gene08648:CDS 60.0%
GGTCCAGATGCCTGGGATGA+AGG + chr4.1:39364396-39364415 MS.gene08648:CDS 60.0%
GTCGACATGCAGATCCCAGC+TGG - chr4.1:39368171-39368190 None:intergenic 60.0%
TTCTCTTGGCCAGCCTGGTC+CGG + chr4.1:39364803-39364822 MS.gene08648:intron 60.0%
! AGCCTGGTCCGGATTCGGTT+GGG + chr4.1:39364814-39364833 MS.gene08648:intron 60.0%
!! TCATTGTACGGTGGCGGAGG+TGG + chr4.1:39367793-39367812 MS.gene08648:intron 60.0%
!! TCCCTGTCTGGTTCTGGCAC+TGG + chr4.1:39365404-39365423 MS.gene08648:CDS 60.0%
!! TGCTCCAACAACGCTGGCTC+CGG + chr4.1:39365226-39365245 MS.gene08648:CDS 60.0%
CAACCGAATCCGGACCAGGC+TGG - chr4.1:39364815-39364834 None:intergenic 65.0%
GGAGTGGCAGCTCGAGCTTG+CGG + chr4.1:39364864-39364883 MS.gene08648:CDS 65.0%
GGCCAGTGCCAGAACCAGAC+AGG - chr4.1:39365409-39365428 None:intergenic 65.0%
TGGCCAGCCTGGTCCGGATT+CGG + chr4.1:39364809-39364828 MS.gene08648:intron 65.0%
! CAGCCTGGTCCGGATTCGGT+TGG + chr4.1:39364813-39364832 MS.gene08648:intron 65.0%
TGGCTCCGGCCCGGGATTTC+TGG + chr4.1:39365240-39365259 MS.gene08648:CDS 70.0%
!! AACAACGCTGGCTCCGGCCC+GGG + chr4.1:39365232-39365251 MS.gene08648:CDS 70.0%
!! CAACAACGCTGGCTCCGGCC+CGG + chr4.1:39365231-39365250 MS.gene08648:CDS 70.0%
CGGGCCGGAGCCAGCGTTGT+TGG - chr4.1:39365233-39365252 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 39363258 39368302 39363258 ID=MS.gene08648
chr4.1 mRNA 39363258 39368302 39363258 ID=MS.gene08648.t1;Parent=MS.gene08648
chr4.1 exon 39363258 39363499 39363258 ID=MS.gene08648.t1.exon1;Parent=MS.gene08648.t1
chr4.1 CDS 39363258 39363499 39363258 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39363599 39363758 39363599 ID=MS.gene08648.t1.exon2;Parent=MS.gene08648.t1
chr4.1 CDS 39363599 39363758 39363599 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39364148 39364233 39364148 ID=MS.gene08648.t1.exon3;Parent=MS.gene08648.t1
chr4.1 CDS 39364148 39364233 39364148 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39364327 39364417 39364327 ID=MS.gene08648.t1.exon4;Parent=MS.gene08648.t1
chr4.1 CDS 39364327 39364417 39364327 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39364816 39364911 39364816 ID=MS.gene08648.t1.exon5;Parent=MS.gene08648.t1
chr4.1 CDS 39364816 39364911 39364816 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39365032 39365145 39365032 ID=MS.gene08648.t1.exon6;Parent=MS.gene08648.t1
chr4.1 CDS 39365032 39365145 39365032 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39365221 39365304 39365221 ID=MS.gene08648.t1.exon7;Parent=MS.gene08648.t1
chr4.1 CDS 39365221 39365304 39365221 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39365392 39365547 39365392 ID=MS.gene08648.t1.exon8;Parent=MS.gene08648.t1
chr4.1 CDS 39365392 39365547 39365392 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39365628 39365702 39365628 ID=MS.gene08648.t1.exon9;Parent=MS.gene08648.t1
chr4.1 CDS 39365628 39365702 39365628 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39365787 39365893 39365787 ID=MS.gene08648.t1.exon10;Parent=MS.gene08648.t1
chr4.1 CDS 39365787 39365893 39365787 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39366025 39366208 39366025 ID=MS.gene08648.t1.exon11;Parent=MS.gene08648.t1
chr4.1 CDS 39366025 39366208 39366025 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39366291 39366479 39366291 ID=MS.gene08648.t1.exon12;Parent=MS.gene08648.t1
chr4.1 CDS 39366291 39366479 39366291 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39366646 39366726 39366646 ID=MS.gene08648.t1.exon13;Parent=MS.gene08648.t1
chr4.1 CDS 39366646 39366726 39366646 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39366945 39367079 39366945 ID=MS.gene08648.t1.exon14;Parent=MS.gene08648.t1
chr4.1 CDS 39366945 39367079 39366945 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39367238 39367572 39367238 ID=MS.gene08648.t1.exon15;Parent=MS.gene08648.t1
chr4.1 CDS 39367238 39367572 39367238 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39367668 39367773 39367668 ID=MS.gene08648.t1.exon16;Parent=MS.gene08648.t1
chr4.1 CDS 39367668 39367773 39367668 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39367907 39368056 39367907 ID=MS.gene08648.t1.exon17;Parent=MS.gene08648.t1
chr4.1 CDS 39367907 39368056 39367907 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
chr4.1 exon 39368153 39368302 39368153 ID=MS.gene08648.t1.exon18;Parent=MS.gene08648.t1
chr4.1 CDS 39368153 39368302 39368153 ID=cds.MS.gene08648.t1;Parent=MS.gene08648.t1
Gene Sequence

>MS.gene08648

ATGGCTATGGCTATGGCTGTGGCTCATCATAGAGAAACTAGTAGCAGTGGTGGAAGCATTGATAAGCATCTAGATTCAGGGAAATATGTTAGGTACACTACTGAACAAGTTGAAGCATTGGAAAGGGTTTATGCTGAGTGTCCTAAGCCTAGTTCCATGAGAAGACAACAATTGATTCGTGAGTGTCCTATTCTTTCCAACATTGAACCTAAACAGATCAAGGTTTGGTTCCAAAATCGAAGGTATTGAAAACTTTGGTTTTTATAAGTTTGAGCTTCATTGGTATGTGTGAAATCAGCACTTAGTTTTGTTTTGTTTTTTTGGTGTTTAATGTTTTGCAGGTGTAGAGAGAAGCAAAGAAAAGAGGCTTCAAGGCTTCAAACTGTGAATAGGAAATTGTCTGCAATGAACAAGTTGTTGATGGAGGAAAATGATAGGTTGCAGAAACAAGTGTCACAGCTTGTGTGTGAGAATGGATTTATGAGGCAACAATTGCATACTGTAAGTGTATGAGGAACATGTTTCATGTCATAATTCTACTTTTGGAGGAGGCGGAATTGATTCTATTCGAGTAGAATTGATTTTGACATGTTTGGATTTTTTCGATTAGAAGTGATTCCAATTTAATGCTAGAATTCAATGGCCTTTTCCTCTACAATTGATTACTATATTAACTTCAAATTTGTTGTTCAATTCACTTTGACATGAACGGACATGAACGTATTCAAATATAAATCACTTTACGTTAACTCACTTTAAGCCCGAATCAATTTTATAAACCAATTCATTTGAAATCAAATTTTTGTCACCAAAATACCAAAAATGCACTAAGTTAAGGCCTTGGAATTGATATTGATGGATATTATATTTGGTTGTTTTGATCTATGCAGCCATCAGCAGCAAATACTGATGCAAGTTGTGACTCAGTAGTTACTACTCCTCAGAATTCTAAGAGAGATGCTACTAACCCTGCTGGGTAATTTTTAGGCTTATGAAATGAACTTTTTGTGATTTTTTTTTCTGTCTTGAAGGTTTCCTAATTCTTTTTCTATTGTGTAATCATTTGCAGACTCCTATCAATTGCGGAGGAGACTTTGACAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGGTCTCTTATTTGTATTCCTTGCTGTAAATTTAGTACGAACAAAACATCGATTTAGTCCCTAAAATATGACTCTCTCCAATAAAGTCTCTAAAGTATATGATATCTGTCATTTTAGTCTTTGCCATTAAAAGGTTAGGGACTAACATAGCGGATTTGCATATACTTAAAGAACTAAAATGAAGGATTTGATATTCTTTAAGGACTACTTATTAATTTTATATACTTTCAAGACTAAACTCGAGAAAGAGTAATACTTTAAAGACAATTGAAATTAGTGGTCATGGCTTTTAGGAGATAATAATTTTGATTTTCATTATGATACTATGCCGATTTGAAAATGAAGGCCAAGTTTTTTCTACTAAATTATCTTTGTATACATTTGTTATTCTCTTGGCCAGCCTGGTCCGGATTCGGTTGGGATCTTTGCGATTTCACAAAGTTGTAGTGGAGTGGCAGCTCGAGCTTGCGGTCTTGTTAGTTTAGAACCTACAAAGGTAAATTCCATACTTCCGAATAAGATGTAAAAGTGTGGTTTGCAATTTTTATGTCATTTGTTGCCATGCAAGTTGAGTTCATCAAACTGTATGAATTTCTAAATCCCGATTTTTTAACAGATTGCAGAGATCCTTAAAGATCGTTTATCTTGGTTTCGCGAGTGTCGGAACCTAGAAGTTTTCACAATGTTTCCTGCCGGAAATGGAGGAACCATTGAGCTTATTTACACACAGGTGAGCTTCAAATATAAATTTAGAGACTTGTGTTGATTTATTCATACCTTTGTGTAACCTTCAGATTTGCTACAGACATATGCTCCAACAACGCTGGCTCCGGCCCGGGATTTCTGGACTCTTAGATACACTACAACTTTGGACAATGGCAGTCTTGTGGTGAGTATGTTTTGTCATCTGGTGCATAGTAATAAAAGGAGTTGACTAATCTTACTTGACGCATATATTTTGATTCCACTTTTGAAGGTTTGTGAAAGGTCCCTGTCTGGTTCTGGCACTGGCCCTAATTCAACTGCTGCTGCTCAGTTTGTAAGAGCTGAAATGCTCCCGAGTGGCTACTTGATTCGACCATGTGATGGTGGCGGTTCAATCATCCACATTGTAGACCACTTAAATCTTGAAGTAATACATCTTAACCATATGAGATCATGTATATCTTTTCATTCATTACACACATTAATTTGTTTATTCTTGTCTTTTAGCCGTGGAGTGTGCCAGAAGTACTACGACCACTTTATGAATCACCAAAGGTGGTGGCTCAAAAAATGACCATTGCAGTAAGTTCACTATTATTAATCTGTAAAGTGTAAGATTCGTTGCAAAAGTTTGTTGACTAATGTTATTGGTGCCTTTTGTGATAGGCACTTCGATATATTAGGCAAATAGCTCAGGAATCGAGTGGTGAAGTGGTATACGGATTAGGTAGACAGCCTGCTGTTTTGCGAACATTCAGCCAAAGATTGAGCAGGTAGCCACATGAAATGATTTGTTTCCTTGAAGGTCATACGTGCCCACAGTTCTGGTCTATCGATTTTTACAGTATCATTCTTGATTTGTATATCAGTTTTTTGGCTGAAAACTGATGTATTACATCTGCAGAGGCTTCAATGACGCTGTAAATGGATTCAGTGATGATGGTTGGTCTATACTGAACTGTGACGGCGCTGAGGATGTAATTATTGCTGTTAATTCAACCAAGAATCTAAGTAGCTCTTCTAATCCAGCAAGTTCCCTCACATTGCTTGGAGGAATTCTCTGTGCAAAAGCTTCTATGTTGCTACAAGTGAGTCTTGTGAACTCGATGTCACAATATTTTCAACAGTGTCCGTTTTGGGATGTTAGTTTTTATACTGCTTTGCTTGCAGAACGTTCCTCCAGCGGTTTTGGTTCGCTTTCTAAGGGAACACCGCTCAGAATGGGCTGATTTCAATGTTGATGCATACTCCGCTGCATCACTGAAAGCAGGAACCTATGCCTATCCAGGGATGAGGCCTACAAGATTCACTGGCAATCAAATAATCATGCCTCTTGGGAACACAATTGAACATGAAGAGGTATTGTAATGTTTACATTCACTTCACATGCTTGATCAAAATGTCTTCAGTGTTGTGGAATCCATTAGCATGCTATGTATAGTGATGTCAACAATTTTTGATCTTATCACTAGAAACATTTGTTCATTCAAATTATGTTCCTGATGAAGTTAAATCTTCACTGCAGATGCTTGAAGTTATTAGGCTTGAAGGCCACTCTCTTGCTCAAGAAGATGCTTTTGTTTCTAGGGATATTCACCTGTTACAGGTAATGCCTTACTATTGATAAATTATTGAGCATTTTCCCTATCAACCTCTTCTTACATAAGCTGAGCCAGATTTATCGGTAATATATTATCTTCGGTAAAAATGGTTGAATTTTACAACCGATGAAATGATTTCTTGTATGTAGTTGTGGTCTAAACATAAACAAATATGATCAATATAGGTATGTACTGAGGTGTTTTATGTGTATTCTTCTTGCAGATATGTAGTGGGACTGATGAGAACGCTGTTGGGACTTGTTCTGAGCTCATATTTGCTCCAATTGATGAAATGTTCCCAGATGATGCTCCATTGGTGCCTTCTGGTTTCCGCATCATCCCATTAGATTCAAAACCAGTTAAGTTTTGTTCCCTTCTTTTTTCCTCTCTATTGAGCTAATTTTTCATCTTTTTCCTGATTTACTCAAATTAAGTGTCTTCCTATGGCGGATGAATGTGATGATTTTGGAGTTCAAATAATTTAATTTCACACGATGTTACTATTTTCTGTTTTAGGGGGATAAGAAGGATGCCGTGAATACAAACCGGACACTGGATTTGACGTCAGGTCTTGAAGTGAACCCAACGACAACTCACGGCAGTGCAGATTCATCATCAAGCCAAAACACCCGATCAGTGTTGACTATTGCCTTTCAGTTCCCTTTTGACAGCACTATGCAAGATAATGTTGTAATCATGGCACGTCAATATGTTCGTAGTGTGATTTCCTCTGTGCAGAGGGTTGCCATGGCCATTTCTCCGTCCGGTATAAACCCAGCTGTTGGTGCCAAACTTTCTCCTGGTTCTCCAGAAGCAGTTACACTAGCTCAATGGATCTGCCAGAGTTATAGGCAAGTCTACATATTTATCTCGAATATCTTGAGCATTCTAGTTGATATTTCTTTTCTGAAAAAAGTCTAATGGATTTATCTTTCCCTTTAATCAGTTACTATTTGGGGACGGACTTACTGAGATCAGATTCTCTTGTTGGTGACTTGATGCTGAAACAACTGTGGCATCACCAGGACGCGATTTTATGCTGTTCATTGAAGGTATGGCTGTAATTCTATTTCATTGTACGGTGGCGGAGGTGGTTCTTATGTTTAGAAAGGAAGTTGGAAGGTTTGTAATTTTGGTAGTCCTTTATAACGCGAGATTAATGTGATTTTCTGTTTGGTATTGCAGTCGCAGCCGGTGTTTGTATTTGCAAATCAAGCTGGCCTTGACATGTTGGAAACAACTCTAGTAGCTTTACAAGACATTACATTGGATAAAATATTTGACGAGTCTGGTCGCAAGGCGTTGTGTGCTGATTTTGCCAAGTTAATGCAACAGGTGGTTTCCTCAACTTAACATGAATAATGCAATAGATGTTTTTAAATCTTTTTTCAAGAGCTTGTACTAATTATAAGTTGTGTATACTTTGATTAGGGGTTTGCTTATCTGCCAGCTGGGATCTGCATGTCGACAATGGGGCGGCATGTTTCGTACGAGCAAGCCATTGCATGGAAAGTGCTAACACCAGAAGATAACACTGTTCATTGCTTAGCTTTCTCTTTCATAAATTGGTCATTTGTATGA
Protein sequence

>MS.gene08648.t1

MAMAMAVAHHRETSSSGGSIDKHLDSGKYVRYTTEQVEALERVYAECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTPSAANTDASCDSVVTTPQNSKRDATNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRLSWFRECRNLEVFTMFPAGNGGTIELIYTQTYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGTGPNSTAAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVLRPLYESPKVVAQKMTIAALRYIRQIAQESSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFSDDGWSILNCDGAEDVIIAVNSTKNLSSSSNPASSLTLLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGTYAYPGMRPTRFTGNQIIMPLGNTIEHEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGTDENAVGTCSELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKKDAVNTNRTLDLTSGLEVNPTTTHGSADSSSSQNTRSVLTIAFQFPFDSTMQDNVVIMARQYVRSVISSVQRVAMAISPSGINPAVGAKLSPGSPEAVTLAQWICQSYSYYLGTDLLRSDSLVGDLMLKQLWHHQDAILCCSLKSQPVFVFANQAGLDMLETTLVALQDITLDKIFDESGRKALCADFAKLMQQGFAYLPAGICMSTMGRHVSYEQAIAWKVLTPEDNTVHCLAFSFINWSFV