AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08840.t1 MTR_8g081020 92.126 381 1 1 1 352 1 381 0.0 677
MS.gene08840.t1 MTR_4g088495 92.105 380 1 1 1 351 77 456 0.0 676
MS.gene08840.t1 MTR_4g088495 92.105 380 1 1 1 351 153 532 0.0 676
MS.gene08840.t1 MTR_4g088495 92.105 380 1 1 1 351 229 608 0.0 676
MS.gene08840.t1 MTR_4g088495 92.105 380 1 1 1 351 305 684 0.0 676
MS.gene08840.t1 MTR_4g088495 92.105 380 1 1 1 351 381 760 0.0 676
MS.gene08840.t1 MTR_4g088495 92.105 380 1 1 1 351 457 836 0.0 676
MS.gene08840.t1 MTR_4g088495 91.842 380 2 1 1 351 1 380 0.0 672
MS.gene08840.t1 MTR_4g081010 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 MTR_4g081010 92.105 380 1 1 1 351 77 456 0.0 675
MS.gene08840.t1 MTR_4g081010 92.105 380 1 1 1 351 153 532 0.0 675
MS.gene08840.t1 MTR_4g080797 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 MTR_4g081010 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 MTR_8g018230 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 MTR_8g018230 92.105 380 1 1 1 351 77 456 0.0 675
MS.gene08840.t1 MTR_8g018230 92.105 380 1 1 1 351 153 532 0.0 675
MS.gene08840.t1 MTR_8g018230 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 MTR_8g018230 92.105 380 1 1 1 351 77 456 0.0 675
MS.gene08840.t1 MTR_8g018230 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 MTR_8g018230 92.105 380 1 1 1 351 77 456 0.0 675
MS.gene08840.t1 MTR_8g018230 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 MTR_4g091580 91.842 380 2 1 1 351 1 380 0.0 674
MS.gene08840.t1 MTR_4g091580 91.579 380 3 1 1 351 1 380 0.0 671
MS.gene08840.t1 MTR_4g091580 91.579 380 3 1 1 351 77 456 0.0 671
MS.gene08840.t1 MTR_4g091580 91.579 380 3 1 1 351 153 532 0.0 671
MS.gene08840.t1 MTR_4g081010 90.132 304 1 1 1 275 1 304 0.0 525
MS.gene08840.t1 MTR_4g081010 90.132 304 1 1 77 351 1 304 0.0 525
MS.gene08840.t1 MTR_6g061930 84.262 305 4 2 1 276 1 290 4.36e-173 483
MS.gene08840.t1 MTR_6g061930 84.539 304 3 2 77 351 1 289 5.79e-173 482
MS.gene08840.t1 MTR_7g116360 99.561 228 1 0 124 351 1 228 6.84e-162 452
MS.gene08840.t1 MTR_7g116360 86.900 229 1 1 1 200 1 229 2.30e-132 377
MS.gene08840.t1 MTR_7g116360 86.463 229 2 1 77 276 1 229 9.65e-132 375
MS.gene08840.t1 MTR_4g081010 99.561 228 1 0 124 351 1 228 8.53e-162 454
MS.gene08840.t1 MTR_4g081010 87.705 244 1 1 1 215 1 244 5.64e-143 406
MS.gene08840.t1 MTR_4g081010 87.705 244 1 1 77 291 1 244 5.64e-143 406
MS.gene08840.t1 MTR_1g066390 99.561 228 1 0 124 351 1 228 8.83e-162 452
MS.gene08840.t1 MTR_1g066390 87.281 228 0 1 1 199 1 228 3.77e-132 377
MS.gene08840.t1 MTR_1g066390 86.842 228 1 1 77 275 1 228 1.60e-131 375
MS.gene08840.t1 MTR_7g116360 99.561 228 1 0 124 351 49 276 9.91e-162 453
MS.gene08840.t1 MTR_7g116360 86.900 229 1 1 1 200 49 277 3.81e-132 378
MS.gene08840.t1 MTR_8g018230 99.561 228 1 0 124 351 1 228 1.53e-161 452
MS.gene08840.t1 MTR_8g018230 78.361 305 2 2 1 276 1 270 5.73e-156 438
MS.gene08840.t1 MTR_8g018230 78.618 304 1 2 77 351 1 269 7.45e-156 438
MS.gene08840.t1 MTR_4g088485 92.982 228 1 1 124 351 1 213 9.26e-147 413
MS.gene08840.t1 MTR_4g088485 85.514 214 17 1 1 200 1 214 2.36e-120 346
MS.gene08840.t1 MTR_4g080920 88.596 228 26 0 124 351 1 228 6.81e-142 401
MS.gene08840.t1 MTR_4g080920 76.754 228 24 1 1 199 1 228 9.46e-113 327
MS.gene08840.t1 MTR_4g080920 76.316 228 25 1 77 275 1 228 2.61e-112 326
MS.gene08840.t1 MTR_8g479250 69.178 292 54 6 77 347 1 277 4.09e-112 328
MS.gene08840.t1 MTR_8g479250 66.107 298 53 8 1 271 1 277 1.20e-104 309
MS.gene08840.t1 MTR_8g479250 65.417 240 47 5 124 351 1 216 1.30e-82 253
MS.gene08840.t1 MTR_5g092700 79.739 153 31 0 200 352 1 153 3.10e-82 247
MS.gene08840.t1 MTR_5g092700 79.605 152 31 0 124 275 1 152 3.11e-81 244
MS.gene08840.t1 MTR_5g092700 67.763 152 20 1 1 123 1 152 3.62e-60 191
MS.gene08840.t1 MTR_5g092700 61.184 152 30 1 77 199 1 152 7.48e-52 169
MS.gene08840.t1 MTR_4g073580 79.739 153 31 0 200 352 1 153 3.10e-82 247
MS.gene08840.t1 MTR_4g073580 79.605 152 31 0 124 275 1 152 3.11e-81 244
MS.gene08840.t1 MTR_4g073580 67.763 152 20 1 1 123 1 152 3.62e-60 191
MS.gene08840.t1 MTR_4g073580 61.184 152 30 1 77 199 1 152 7.48e-52 169
MS.gene08840.t1 MTR_4g073580 66.667 183 31 1 200 352 1 183 1.34e-75 231
MS.gene08840.t1 MTR_4g073580 66.484 182 31 1 124 275 1 182 1.33e-74 228
MS.gene08840.t1 MTR_4g073580 61.809 199 59 2 1 199 1 182 1.10e-71 221
MS.gene08840.t1 MTR_3g092130 98.701 77 1 0 1 77 1 77 1.23e-47 158
MS.gene08840.t1 MTR_3g092130 98.701 77 1 0 124 200 1 77 1.23e-47 158
MS.gene08840.t1 MTR_3g092130 100.000 76 0 0 276 351 1 76 1.89e-47 157
MS.gene08840.t1 MTR_3g092130 97.403 77 2 0 200 276 1 77 5.40e-47 156
MS.gene08840.t1 MTR_3g092130 61.039 77 1 1 77 124 1 77 4.18e-18 80.1
MS.gene08840.t1 MTR_7g105080 98.701 77 1 0 1 77 1 77 1.81e-47 157
MS.gene08840.t1 MTR_7g105080 98.701 77 1 0 124 200 1 77 1.81e-47 157
MS.gene08840.t1 MTR_7g105080 100.000 76 0 0 276 351 1 76 2.72e-47 157
MS.gene08840.t1 MTR_7g105080 97.403 77 2 0 200 276 1 77 8.85e-47 155
MS.gene08840.t1 MTR_7g105080 61.039 77 1 1 77 124 1 77 3.88e-18 80.1
MS.gene08840.t1 MTR_3g092130 98.701 77 1 0 1 77 1 77 1.81e-47 157
MS.gene08840.t1 MTR_3g092130 98.701 77 1 0 124 200 1 77 1.81e-47 157
MS.gene08840.t1 MTR_3g092130 100.000 76 0 0 276 351 1 76 2.72e-47 157
MS.gene08840.t1 MTR_3g092130 97.403 77 2 0 200 276 1 77 8.85e-47 155
MS.gene08840.t1 MTR_3g092130 61.039 77 1 1 77 124 1 77 3.88e-18 80.1
MS.gene08840.t1 MTR_1g059690 98.701 77 1 0 1 77 1 77 1.81e-47 157
MS.gene08840.t1 MTR_1g059690 98.701 77 1 0 124 200 1 77 1.81e-47 157
MS.gene08840.t1 MTR_1g059690 100.000 76 0 0 276 351 1 76 2.72e-47 157
MS.gene08840.t1 MTR_1g059690 97.403 77 2 0 200 276 1 77 8.85e-47 155
MS.gene08840.t1 MTR_1g059690 61.039 77 1 1 77 124 1 77 3.88e-18 80.1
MS.gene08840.t1 MTR_8g088060 100.000 76 0 0 1 76 1 76 1.10e-46 156
MS.gene08840.t1 MTR_8g088060 100.000 76 0 0 124 199 1 76 1.10e-46 156
MS.gene08840.t1 MTR_8g088060 100.000 76 0 0 276 351 1 76 1.10e-46 156
MS.gene08840.t1 MTR_8g088060 98.684 76 1 0 200 275 1 76 5.55e-46 154
MS.gene08840.t1 MTR_8g088060 61.842 76 0 1 77 123 1 76 1.61e-17 79.0
MS.gene08840.t1 MTR_5g033960 100.000 76 0 0 1 76 1 76 1.28e-46 155
MS.gene08840.t1 MTR_5g033960 100.000 76 0 0 124 199 1 76 1.28e-46 155
MS.gene08840.t1 MTR_5g033960 100.000 76 0 0 276 351 1 76 1.28e-46 155
MS.gene08840.t1 MTR_5g033960 98.684 76 1 0 200 275 1 76 6.45e-46 154
MS.gene08840.t1 MTR_5g033960 61.842 76 0 1 77 123 1 76 1.75e-17 79.0
MS.gene08840.t1 MTR_1g046640 71.053 76 22 0 1 76 240 315 1.73e-26 107
MS.gene08840.t1 MTR_1g046640 71.053 76 22 0 124 199 240 315 1.73e-26 107
MS.gene08840.t1 MTR_1g046640 71.053 76 22 0 276 351 240 315 1.73e-26 107
MS.gene08840.t1 MTR_1g046640 71.053 76 22 0 200 275 240 315 6.85e-26 105
MS.gene08840.t1 MTR_5g076660 63.855 83 30 0 114 196 256 338 1.03e-25 105
MS.gene08840.t1 MTR_5g076660 63.855 83 30 0 266 348 256 338 1.03e-25 105
MS.gene08840.t1 MTR_5g076660 69.863 73 22 0 1 73 266 338 1.91e-25 105
MS.gene08840.t1 MTR_5g076660 63.855 83 30 0 190 272 256 338 4.20e-25 104
MS.gene08840.t1 MTR_5g076810 68.831 77 23 1 1 76 194 270 1.11e-25 104
MS.gene08840.t1 MTR_5g076810 68.831 77 23 1 124 199 194 270 1.11e-25 104
MS.gene08840.t1 MTR_5g076810 68.831 77 23 1 276 351 194 270 1.11e-25 104
MS.gene08840.t1 MTR_5g076810 67.532 77 24 1 200 275 194 270 4.54e-25 102
MS.gene08840.t1 MTR_4g080783 54.286 105 31 2 44 148 7 94 2.27e-25 98.6
MS.gene08840.t1 MTR_4g080783 53.409 88 11 1 243 300 7 94 1.45e-19 82.8
MS.gene08840.t1 MTR_4g080783 52.273 88 12 1 167 224 7 94 4.12e-19 81.6
MS.gene08840.t1 MTR_5g061310 60.000 75 30 0 1 75 2 76 2.50e-23 92.4
MS.gene08840.t1 MTR_5g061310 60.000 75 30 0 124 198 2 76 2.50e-23 92.4
MS.gene08840.t1 MTR_5g061310 60.000 75 30 0 276 350 2 76 2.50e-23 92.4
MS.gene08840.t1 MTR_5g061310 60.000 75 30 0 200 274 2 76 8.12e-23 90.9
MS.gene08840.t1 MTR_5g067400 68.421 76 24 0 1 76 241 316 4.31e-23 98.2
MS.gene08840.t1 MTR_5g067400 68.421 76 24 0 124 199 241 316 4.31e-23 98.2
MS.gene08840.t1 MTR_5g067400 68.421 76 24 0 276 351 241 316 4.31e-23 98.2
MS.gene08840.t1 MTR_5g067400 67.105 76 25 0 200 275 241 316 1.68e-22 96.7
MS.gene08840.t1 MTR_5g076370 59.036 83 34 0 114 196 257 339 9.51e-22 94.7
MS.gene08840.t1 MTR_5g076370 59.036 83 34 0 266 348 257 339 9.51e-22 94.7
MS.gene08840.t1 MTR_5g076370 64.384 73 26 0 1 73 267 339 1.66e-21 94.4
MS.gene08840.t1 MTR_5g076370 59.036 83 34 0 190 272 257 339 4.02e-21 93.2
MS.gene08840.t1 MTR_5g076505 61.333 75 29 0 200 274 240 314 1.17e-20 91.3
MS.gene08840.t1 MTR_5g076505 61.333 75 29 0 1 75 240 314 1.26e-20 91.3
MS.gene08840.t1 MTR_5g076505 61.333 75 29 0 124 198 240 314 1.26e-20 91.3
MS.gene08840.t1 MTR_5g076505 61.333 75 29 0 276 350 240 314 1.26e-20 91.3
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 1 76 171 246 1.65e-20 89.7
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 124 199 171 246 1.65e-20 89.7
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 276 351 171 246 1.65e-20 89.7
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 200 275 171 246 6.03e-20 88.2
MS.gene08840.t1 MTR_5g076720 65.333 75 26 0 1 75 315 389 2.01e-20 91.7
MS.gene08840.t1 MTR_5g076720 65.333 75 26 0 124 198 315 389 2.01e-20 91.7
MS.gene08840.t1 MTR_5g076720 65.333 75 26 0 276 350 315 389 2.01e-20 91.7
MS.gene08840.t1 MTR_5g076720 64.000 75 27 0 200 274 315 389 7.35e-20 90.1
MS.gene08840.t1 MTR_2g038430 61.333 75 29 0 1 75 268 342 2.21e-20 91.3
MS.gene08840.t1 MTR_2g038430 61.333 75 29 0 124 198 268 342 2.21e-20 91.3
MS.gene08840.t1 MTR_2g038430 61.333 75 29 0 276 350 268 342 2.21e-20 91.3
MS.gene08840.t1 MTR_2g038430 60.000 75 30 0 200 274 268 342 8.55e-20 89.4
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 1 76 240 315 3.01e-20 90.1
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 124 199 240 315 3.01e-20 90.1
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 276 351 240 315 3.01e-20 90.1
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 200 275 240 315 1.10e-19 88.6
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 1 76 240 315 4.12e-20 89.7
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 124 199 240 315 4.12e-20 89.7
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 276 351 240 315 4.12e-20 89.7
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 200 275 240 315 1.54e-19 88.2
MS.gene08840.t1 MTR_5g076740 57.692 78 32 1 122 198 84 161 5.13e-20 86.3
MS.gene08840.t1 MTR_5g076740 57.692 78 32 1 274 350 84 161 5.13e-20 86.3
MS.gene08840.t1 MTR_5g076740 59.211 76 30 1 1 75 86 161 5.92e-20 85.9
MS.gene08840.t1 MTR_5g076740 57.692 78 32 1 198 274 84 161 1.80e-19 84.7
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 1 76 271 346 6.48e-20 89.7
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 124 199 271 346 6.48e-20 89.7
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 276 351 271 346 6.48e-20 89.7
MS.gene08840.t1 MTR_1g046650 57.895 76 32 0 200 275 271 346 2.37e-19 88.2
MS.gene08840.t1 MTR_2g038420 60.000 75 30 0 1 75 260 334 1.19e-19 89.0
MS.gene08840.t1 MTR_2g038420 60.000 75 30 0 124 198 260 334 1.19e-19 89.0
MS.gene08840.t1 MTR_2g038420 60.000 75 30 0 276 350 260 334 1.19e-19 89.0
MS.gene08840.t1 MTR_2g038420 58.667 75 31 0 200 274 260 334 4.35e-19 87.4
MS.gene08840.t1 MTR_7g094390 54.118 85 39 0 114 198 392 476 8.63e-19 87.8
MS.gene08840.t1 MTR_7g094390 54.118 85 39 0 266 350 392 476 8.63e-19 87.8
MS.gene08840.t1 MTR_7g094390 58.667 75 31 0 1 75 402 476 1.23e-18 87.0
MS.gene08840.t1 MTR_7g094390 54.118 85 39 0 190 274 392 476 3.42e-18 85.9
MS.gene08840.t1 MTR_5g076520 57.333 75 31 1 1 74 244 318 1.20e-17 82.8
MS.gene08840.t1 MTR_5g076520 57.333 75 31 1 124 197 244 318 1.20e-17 82.8
MS.gene08840.t1 MTR_5g076520 57.333 75 31 1 276 349 244 318 1.20e-17 82.8
MS.gene08840.t1 MTR_5g076520 57.333 75 31 1 200 273 244 318 4.33e-17 81.3
MS.gene08840.t1 MTR_7g024290 60.526 76 29 1 1 75 241 316 8.60e-17 80.5
MS.gene08840.t1 MTR_7g024290 60.526 76 29 1 124 198 241 316 8.60e-17 80.5
MS.gene08840.t1 MTR_7g024290 60.526 76 29 1 276 350 241 316 8.60e-17 80.5
MS.gene08840.t1 MTR_7g024290 59.211 76 30 1 200 274 241 316 3.28e-16 78.6
MS.gene08840.t1 MTR_5g061290 53.333 75 35 0 1 75 252 326 4.29e-16 78.6
MS.gene08840.t1 MTR_5g061290 53.333 75 35 0 124 198 252 326 4.29e-16 78.6
MS.gene08840.t1 MTR_5g061290 53.333 75 35 0 276 350 252 326 4.29e-16 78.6
MS.gene08840.t1 MTR_5g061290 53.333 75 35 0 200 274 252 326 1.56e-15 77.0
MS.gene08840.t1 MTR_4g009980 55.224 67 30 0 9 75 4 70 7.17e-16 72.0
MS.gene08840.t1 MTR_4g009980 55.224 67 30 0 132 198 4 70 7.17e-16 72.0
MS.gene08840.t1 MTR_4g009980 55.224 67 30 0 208 274 4 70 7.17e-16 72.0
MS.gene08840.t1 MTR_4g009980 55.224 67 30 0 284 350 4 70 7.17e-16 72.0
MS.gene08840.t1 MTR_8g027610 31.953 169 103 6 188 349 26 189 2.83e-15 77.4
MS.gene08840.t1 MTR_8g027610 31.361 169 104 6 112 273 26 189 4.98e-15 76.6
MS.gene08840.t1 MTR_8g027610 36.937 111 67 3 3 111 38 147 1.89e-11 65.5
MS.gene08840.t1 MTR_3g091400 33.562 146 94 3 206 348 32 177 5.21e-15 76.6
MS.gene08840.t1 MTR_3g091400 30.588 170 114 4 106 272 9 177 8.84e-15 75.9
MS.gene08840.t1 MTR_3g091400 25.654 191 96 2 7 196 32 177 2.57e-11 65.1
MS.gene08840.t1 MTR_2g088760 26.087 230 145 5 138 344 14 241 2.24e-14 72.4
MS.gene08840.t1 MTR_7g117395 32.237 152 97 4 206 351 42 193 8.87e-14 72.8
MS.gene08840.t1 MTR_7g117395 31.646 158 101 5 124 275 37 193 2.04e-13 71.6
MS.gene08840.t1 MTR_5g076760 58.621 58 24 0 10 67 4 61 9.20e-14 66.6
MS.gene08840.t1 MTR_5g076760 58.621 58 24 0 133 190 4 61 9.20e-14 66.6
MS.gene08840.t1 MTR_5g076760 58.621 58 24 0 209 266 4 61 9.20e-14 66.6
MS.gene08840.t1 MTR_5g076760 58.621 58 24 0 285 342 4 61 9.20e-14 66.6
MS.gene08840.t1 MTR_5g076780 56.452 62 27 0 13 74 2 63 1.06e-13 65.9
MS.gene08840.t1 MTR_5g076780 56.452 62 27 0 136 197 2 63 1.06e-13 65.9
MS.gene08840.t1 MTR_5g076780 56.452 62 27 0 212 273 2 63 1.06e-13 65.9
MS.gene08840.t1 MTR_5g076780 56.452 62 27 0 288 349 2 63 1.06e-13 65.9
MS.gene08840.t1 MTR_5g076350 50.000 74 36 1 1 73 8 81 9.51e-13 63.5
MS.gene08840.t1 MTR_5g076350 50.000 74 36 1 124 196 8 81 9.51e-13 63.5
MS.gene08840.t1 MTR_5g076350 50.000 74 36 1 276 348 8 81 9.51e-13 63.5
MS.gene08840.t1 MTR_5g076350 50.000 74 36 1 200 272 8 81 3.37e-12 62.0
MS.gene08840.t1 MTR_5g076340 52.000 75 34 2 1 73 9 83 5.53e-12 61.6
MS.gene08840.t1 MTR_5g076340 52.000 75 34 2 124 196 9 83 5.53e-12 61.6
MS.gene08840.t1 MTR_5g076340 52.000 75 34 2 276 348 9 83 5.53e-12 61.6
MS.gene08840.t1 MTR_5g076340 52.000 75 34 2 200 272 9 83 1.95e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08840.t1 AT5G20620 91.864 381 2 1 1 352 1 381 0.0 675
MS.gene08840.t1 AT4G05320 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 AT4G05320 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 AT4G05320 92.105 380 1 1 1 351 77 456 0.0 675
MS.gene08840.t1 AT4G05320 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 AT4G05320 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 AT4G05320 92.105 380 1 1 1 351 77 456 0.0 675
MS.gene08840.t1 AT4G05320 92.105 380 1 1 1 351 1 380 0.0 675
MS.gene08840.t1 AT5G03240 89.836 305 2 1 77 352 1 305 0.0 525
MS.gene08840.t1 AT5G03240 90.132 304 1 1 1 275 1 304 0.0 525
MS.gene08840.t1 AT5G03240 89.836 305 2 1 77 352 1 305 0.0 525
MS.gene08840.t1 AT5G03240 90.132 304 1 1 1 275 1 304 0.0 525
MS.gene08840.t1 AT5G03240 89.836 305 2 1 77 352 1 305 0.0 525
MS.gene08840.t1 AT5G03240 90.132 304 1 1 1 275 1 304 0.0 525
MS.gene08840.t1 AT5G20620 89.836 305 2 1 77 352 1 305 0.0 525
MS.gene08840.t1 AT5G20620 90.132 304 1 1 1 275 1 304 0.0 525
MS.gene08840.t1 AT4G05320 89.836 305 2 1 1 276 1 305 0.0 525
MS.gene08840.t1 AT4G05320 90.132 304 1 1 77 351 1 304 0.0 525
MS.gene08840.t1 AT4G05320 89.836 305 2 1 1 276 1 305 0.0 525
MS.gene08840.t1 AT4G05320 90.132 304 1 1 77 351 1 304 0.0 525
MS.gene08840.t1 AT4G02890 89.836 305 2 1 1 276 1 305 0.0 525
MS.gene08840.t1 AT4G02890 90.132 304 1 1 77 351 1 304 0.0 525
MS.gene08840.t1 AT4G02890 89.836 305 2 1 1 276 1 305 0.0 525
MS.gene08840.t1 AT4G02890 90.132 304 1 1 77 351 1 304 0.0 525
MS.gene08840.t1 AT1G65350 84.858 317 6 2 1 275 1 317 4.71e-180 501
MS.gene08840.t1 AT1G65350 84.013 319 7 3 77 352 1 318 6.77e-177 493
MS.gene08840.t1 AT3G09790 70.951 389 70 5 1 346 3 391 7.57e-174 498
MS.gene08840.t1 AT3G09790 66.327 392 85 4 1 349 238 625 1.13e-158 459
MS.gene08840.t1 AT3G09790 63.591 401 92 7 1 351 155 551 1.48e-152 443
MS.gene08840.t1 AT3G09790 69.620 316 55 4 77 351 3 318 3.79e-134 396
MS.gene08840.t1 AT3G09790 70.951 389 70 5 1 346 3 391 7.57e-174 498
MS.gene08840.t1 AT3G09790 66.327 392 85 4 1 349 238 625 1.13e-158 459
MS.gene08840.t1 AT3G09790 63.591 401 92 7 1 351 155 551 1.48e-152 443
MS.gene08840.t1 AT3G09790 69.620 316 55 4 77 351 3 318 3.79e-134 396
MS.gene08840.t1 AT5G37640 82.295 305 24 2 77 351 3 307 5.47e-169 474
MS.gene08840.t1 AT5G37640 81.311 305 27 2 1 275 3 307 6.41e-165 463
MS.gene08840.t1 AT4G05050 99.561 228 1 0 124 351 1 228 7.17e-162 452
MS.gene08840.t1 AT4G05050 86.900 229 1 1 1 200 1 229 2.41e-132 377
MS.gene08840.t1 AT4G05050 86.463 229 2 1 77 276 1 229 1.01e-131 375
MS.gene08840.t1 AT4G05050 99.561 228 1 0 124 351 1 228 7.17e-162 452
MS.gene08840.t1 AT4G05050 86.900 229 1 1 1 200 1 229 2.41e-132 377
MS.gene08840.t1 AT4G05050 86.463 229 2 1 77 276 1 229 1.01e-131 375
MS.gene08840.t1 AT4G05050 99.561 228 1 0 124 351 1 228 7.17e-162 452
MS.gene08840.t1 AT4G05050 86.900 229 1 1 1 200 1 229 2.41e-132 377
MS.gene08840.t1 AT4G05050 86.463 229 2 1 77 276 1 229 1.01e-131 375
MS.gene08840.t1 AT4G02890 99.561 228 1 0 124 351 1 228 7.17e-162 452
MS.gene08840.t1 AT4G02890 86.900 229 1 1 1 200 1 229 2.41e-132 377
MS.gene08840.t1 AT4G02890 86.463 229 2 1 77 276 1 229 1.01e-131 375
MS.gene08840.t1 AT4G02890 99.561 228 1 0 124 351 1 228 7.17e-162 452
MS.gene08840.t1 AT4G02890 86.900 229 1 1 1 200 1 229 2.41e-132 377
MS.gene08840.t1 AT4G02890 86.463 229 2 1 77 276 1 229 1.01e-131 375
MS.gene08840.t1 AT1G55060 93.450 229 15 0 124 352 1 229 1.02e-152 429
MS.gene08840.t1 AT1G55060 82.456 228 11 1 77 275 1 228 2.59e-124 357
MS.gene08840.t1 AT1G55060 81.579 228 13 1 1 199 1 228 6.88e-123 353
MS.gene08840.t1 AT4G05050 98.693 153 2 0 124 276 1 153 3.55e-104 303
MS.gene08840.t1 AT4G05050 99.342 152 1 0 200 351 1 152 4.77e-104 302
MS.gene08840.t1 AT4G05050 80.392 153 1 1 1 124 1 153 1.21e-74 228
MS.gene08840.t1 AT4G05050 80.392 153 1 1 77 200 1 153 1.21e-74 228
MS.gene08840.t1 AT4G05320 98.693 153 2 0 124 276 1 153 3.55e-104 303
MS.gene08840.t1 AT4G05320 99.342 152 1 0 200 351 1 152 4.77e-104 302
MS.gene08840.t1 AT4G05320 80.392 153 1 1 1 124 1 153 1.21e-74 228
MS.gene08840.t1 AT4G05320 80.392 153 1 1 77 200 1 153 1.21e-74 228
MS.gene08840.t1 AT1G31340 78.205 156 34 0 124 279 1 156 9.88e-82 246
MS.gene08840.t1 AT1G31340 80.263 152 30 0 200 351 1 152 1.45e-81 245
MS.gene08840.t1 AT1G31340 66.026 156 24 1 1 127 1 156 4.81e-60 190
MS.gene08840.t1 AT1G31340 60.256 156 33 1 77 203 1 156 2.04e-52 171
MS.gene08840.t1 AT2G35635 79.085 153 32 0 124 276 1 153 5.94e-81 244
MS.gene08840.t1 AT2G35635 79.605 152 31 0 200 351 1 152 1.30e-80 243
MS.gene08840.t1 AT2G35635 67.320 153 21 1 1 124 1 153 2.23e-60 191
MS.gene08840.t1 AT2G35635 60.784 153 31 1 77 200 1 153 1.36e-51 169
MS.gene08840.t1 AT3G52590 98.701 77 1 0 1 77 1 77 1.87e-47 157
MS.gene08840.t1 AT3G52590 98.701 77 1 0 124 200 1 77 1.87e-47 157
MS.gene08840.t1 AT3G52590 100.000 76 0 0 276 351 1 76 2.59e-47 157
MS.gene08840.t1 AT3G52590 97.403 77 2 0 200 276 1 77 8.79e-47 155
MS.gene08840.t1 AT3G52590 61.039 77 1 1 77 124 1 77 4.23e-18 80.1
MS.gene08840.t1 AT2G36170 98.701 77 1 0 1 77 1 77 1.87e-47 157
MS.gene08840.t1 AT2G36170 98.701 77 1 0 124 200 1 77 1.87e-47 157
MS.gene08840.t1 AT2G36170 100.000 76 0 0 276 351 1 76 2.59e-47 157
MS.gene08840.t1 AT2G36170 97.403 77 2 0 200 276 1 77 8.79e-47 155
MS.gene08840.t1 AT2G36170 61.039 77 1 1 77 124 1 77 4.23e-18 80.1
MS.gene08840.t1 AT1G23410 100.000 76 0 0 1 76 1 76 1.24e-46 156
MS.gene08840.t1 AT1G23410 100.000 76 0 0 124 199 1 76 1.24e-46 156
MS.gene08840.t1 AT1G23410 100.000 76 0 0 276 351 1 76 1.24e-46 156
MS.gene08840.t1 AT1G23410 98.684 76 1 0 200 275 1 76 5.87e-46 154
MS.gene08840.t1 AT1G23410 61.842 76 0 1 77 123 1 76 2.07e-17 79.0
MS.gene08840.t1 AT3G62250 100.000 76 0 0 1 76 1 76 1.35e-46 156
MS.gene08840.t1 AT3G62250 100.000 76 0 0 124 199 1 76 1.35e-46 156
MS.gene08840.t1 AT3G62250 100.000 76 0 0 276 351 1 76 1.35e-46 156
MS.gene08840.t1 AT3G62250 98.684 76 1 0 200 275 1 76 6.74e-46 154
MS.gene08840.t1 AT3G62250 61.842 76 0 1 77 123 1 76 1.83e-17 79.0
MS.gene08840.t1 AT2G47110 100.000 76 0 0 1 76 1 76 1.37e-46 156
MS.gene08840.t1 AT2G47110 100.000 76 0 0 124 199 1 76 1.37e-46 156
MS.gene08840.t1 AT2G47110 100.000 76 0 0 276 351 1 76 1.37e-46 156
MS.gene08840.t1 AT2G47110 98.684 76 1 0 200 275 1 76 6.96e-46 154
MS.gene08840.t1 AT2G47110 61.842 76 0 1 77 123 1 76 1.77e-17 79.0
MS.gene08840.t1 AT2G47110 100.000 76 0 0 1 76 1 76 1.37e-46 156
MS.gene08840.t1 AT2G47110 100.000 76 0 0 124 199 1 76 1.37e-46 156
MS.gene08840.t1 AT2G47110 100.000 76 0 0 276 351 1 76 1.37e-46 156
MS.gene08840.t1 AT2G47110 98.684 76 1 0 200 275 1 76 6.96e-46 154
MS.gene08840.t1 AT2G47110 61.842 76 0 1 77 123 1 76 1.77e-17 79.0
MS.gene08840.t1 AT1G53930 49.091 165 54 7 207 348 1 158 2.43e-33 121
MS.gene08840.t1 AT1G53930 49.091 165 54 7 131 272 1 158 7.90e-33 120
MS.gene08840.t1 AT1G53930 45.128 195 64 7 8 196 1 158 4.68e-32 118
MS.gene08840.t1 AT1G53930 75.342 73 18 0 1 73 86 158 1.43e-30 114
MS.gene08840.t1 AT1G53950 51.111 135 54 4 71 198 14 143 1.93e-29 110
MS.gene08840.t1 AT1G53950 41.463 164 55 3 118 274 14 143 1.64e-25 100
MS.gene08840.t1 AT1G53950 41.463 164 55 3 194 350 14 143 1.64e-25 100
MS.gene08840.t1 AT1G53950 60.000 75 30 0 1 75 69 143 2.72e-23 94.7
MS.gene08840.t1 AT1G11980 54.545 77 35 0 1 77 1 77 2.50e-22 89.7
MS.gene08840.t1 AT1G11980 54.545 77 35 0 124 200 1 77 2.50e-22 89.7
MS.gene08840.t1 AT1G11980 55.263 76 34 0 276 351 1 76 2.95e-22 89.7
MS.gene08840.t1 AT1G11980 53.247 77 36 0 200 276 1 77 9.12e-22 88.2
MS.gene08840.t1 AT1G53945 47.009 117 54 3 77 190 1 112 1.09e-20 86.7
MS.gene08840.t1 AT1G53945 38.356 146 53 3 200 342 1 112 1.03e-16 75.9
MS.gene08840.t1 AT1G53945 37.671 146 54 3 124 266 1 112 1.06e-16 75.9
MS.gene08840.t1 AT1G53945 46.269 67 36 0 1 67 46 112 1.30e-11 61.6
MS.gene08840.t1 AT2G46500 35.862 145 90 2 206 347 40 184 8.07e-19 87.4
MS.gene08840.t1 AT2G46500 35.172 145 91 2 130 271 40 184 3.16e-18 85.9
MS.gene08840.t1 AT2G46500 28.947 190 89 4 7 195 40 184 4.04e-13 70.5
MS.gene08840.t1 AT2G46500 35.862 145 90 2 206 347 40 184 1.22e-18 87.4
MS.gene08840.t1 AT2G46500 35.172 145 91 2 130 271 40 184 4.65e-18 85.9
MS.gene08840.t1 AT2G46500 28.947 190 89 4 7 195 40 184 5.17e-13 70.5
MS.gene08840.t1 AT2G46500 35.862 145 90 2 206 347 40 184 1.22e-18 87.4
MS.gene08840.t1 AT2G46500 35.172 145 91 2 130 271 40 184 4.65e-18 85.9
MS.gene08840.t1 AT2G46500 28.947 190 89 4 7 195 40 184 5.17e-13 70.5
MS.gene08840.t1 AT5G24240 33.793 145 91 3 206 346 38 181 2.69e-13 71.2
MS.gene08840.t1 AT5G24240 33.103 145 92 3 130 270 38 181 9.21e-13 69.7
MS.gene08840.t1 AT5G24240 33.793 145 91 3 206 346 38 181 2.69e-13 71.2
MS.gene08840.t1 AT5G24240 33.103 145 92 3 130 270 38 181 9.21e-13 69.7
MS.gene08840.t1 AT1G53980 48.352 91 34 4 77 161 1 84 3.55e-11 59.7

Find 99 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGAAGAGTTGACTCTTTC+TGG 0.089325 4.2:-13557013 None:intergenic
CCCTTCCTTGTCTTGAATCT+TGG 0.171342 4.2:-13556456 None:intergenic
CTCTAGGGTAATGGTCTTTC+CGG 0.231074 4.2:-13557312 None:intergenic
CTTGGCCTTAACATTGTCTA+TGG 0.287712 4.2:-13556438 None:intergenic
AATGAAGGGTAGACTCCTTT+TGG 0.330983 4.2:-13556556 None:intergenic
CAGCAGAGGTTGATCTTTGC+TGG 0.336237 4.2:+13557404 MS.gene08840:CDS
CCACCTTGTCCTTCGTTTGA+GGG 0.338161 4.2:+13557259 MS.gene08840:CDS
AAAATCAATCTTTGCTGGTC+TGG 0.358094 4.2:-13557170 None:intergenic
AAATCAATCTTTGCTGGTCT+GGG 0.363103 4.2:-13557169 None:intergenic
TCCACCTTGTCCTTCGTTTG+AGG 0.367383 4.2:+13557258 MS.gene08840:CDS
AAAATGAGCCTCTGCTGGTC+TGG 0.374589 4.2:-13556942 None:intergenic
CTTTGCTGGGAAGCAGTTAG+AGG 0.384639 4.2:+13557418 MS.gene08840:CDS
AAGATCAACCTCTGCTGATC+TGG 0.386006 4.2:-13557398 None:intergenic
GCTGGCAAGCAGCTGGAGGA+TGG 0.389940 4.2:+13556509 MS.gene08840:CDS
TACTGGCAAGACAATTACTT+TGG 0.412259 4.2:+13557082 MS.gene08840:CDS
AAAATGAGACGCTGCTGGTC+AGG 0.413921 4.2:-13556485 None:intergenic
AAAGGAGTCTACCCTTCATT+TGG 0.416312 4.2:+13556559 MS.gene08840:CDS
CTTTGCCTTGACATTGTCAA+TGG 0.446988 4.2:-13556666 None:intergenic
CAATGTCAAGGCAAAGATAC+AGG 0.478494 4.2:+13556673 MS.gene08840:CDS
TGGCAAGACAATTACTTTGG+AGG 0.478789 4.2:+13557085 MS.gene08840:CDS
TGTTATAATCAGCAAGAGTC+CGG 0.483591 4.2:-13557217 None:intergenic
GCTGGAAAGCAGCTTGAAGA+TGG 0.484184 4.2:+13557194 MS.gene08840:CDS
CATCTTGTGTTGCGACTTCG+TGG 0.484710 4.2:+13556804 MS.gene08840:CDS
CAATGTAAAGGCTAAGATAC+AGG 0.492297 4.2:+13556902 MS.gene08840:CDS
CAATGTAAAGGCTAAGATAC+AGG 0.492297 4.2:+13557130 MS.gene08840:CDS
GCTGGAAAGCAGCTCGAAGA+TGG 0.493968 4.2:+13556966 MS.gene08840:CDS
CACCTTGTCCTTCGTTTGAG+GGG 0.494613 4.2:+13557260 MS.gene08840:CDS
CTGGCAAGCAGCTGGAGGAT+GGG 0.497232 4.2:+13556510 MS.gene08840:CDS
CACCTTGTACTGCGTCTTCG+TGG 0.498337 4.2:+13557488 MS.gene08840:CDS
GTCTGAACTTTCTACCTCTA+GGG 0.502569 4.2:-13557327 None:intergenic
TGTCTGAACTTTCTACCTCT+AGG 0.503974 4.2:-13557328 None:intergenic
ATCAACCTCTGCTGATCTGG+TGG 0.507286 4.2:-13557395 None:intergenic
GAAAGCAGCTCGAAGATGGC+AGG 0.513160 4.2:+13556970 MS.gene08840:CDS
TACTTTGGAGGTAGAGAGCT+CGG 0.513437 4.2:+13556869 MS.gene08840:CDS
TACTTTGGAGGTAGAGAGCT+CGG 0.513437 4.2:+13557097 MS.gene08840:CDS
ACTTTCTACCTCTAGGGTAA+TGG 0.513910 4.2:-13557321 None:intergenic
GGCAAAGATACAGGACAAAG+AGG 0.516423 4.2:+13556682 MS.gene08840:CDS
GAAAGCAGCTTGAAGATGGC+CGG 0.522210 4.2:+13557198 MS.gene08840:CDS
CACGAAGTCGCAACACAAGA+TGG 0.523122 4.2:-13556803 None:intergenic
TTTGGATGTTATAATCTGCA+AGG 0.527053 4.2:-13556538 None:intergenic
CTTGTCCTTCGTTTGAGGGG+AGG 0.529372 4.2:+13557263 MS.gene08840:CDS
AGCAGAGGTTGATCTTTGCT+GGG 0.529946 4.2:+13557405 MS.gene08840:CDS
AGATACCATAGACAATGTTA+AGG 0.537394 4.2:+13556433 MS.gene08840:CDS
TGCAGATTATAACATCCAAA+AGG 0.538373 4.2:+13556541 MS.gene08840:CDS
CACCACGAAGACGCAGTACA+AGG 0.538423 4.2:-13557490 None:intergenic
ATATTTGTGAAGACATTGAC+CGG 0.544942 4.2:+13557293 MS.gene08840:CDS
ATGAGACGCTGCTGGTCAGG+TGG 0.548364 4.2:-13556482 None:intergenic
TGTCAGAGCTCTCCACCTCA+AGG 0.548817 4.2:-13556643 None:intergenic
ATCAATCTTTGCTGGTCTGG+GGG 0.549846 4.2:-13557167 None:intergenic
ATGAGCCTCTGCTGGTCTGG+AGG 0.556041 4.2:-13556939 None:intergenic
AATCAATCTTTGCTGGTCTG+GGG 0.560414 4.2:-13557168 None:intergenic
TTGGATGTTATAATCTGCAA+GGG 0.562824 4.2:-13556537 None:intergenic
TATCTGAACTCTCAACTTCG+AGG 0.568522 4.2:-13556415 None:intergenic
GGAGACGGAGCACCAAATGA+AGG 0.570947 4.2:-13556571 None:intergenic
TCAAACGAAGGACAAGGTGG+AGG 0.573907 4.2:-13557256 None:intergenic
AGACACAATTGATAACGTAA+AGG 0.576461 4.2:+13557346 MS.gene08840:CDS
CCAAGATTCAAGACAAGGAA+GGG 0.576936 4.2:+13556456 MS.gene08840:CDS
GCTGGGAAGCAGTTAGAGGA+TGG 0.577214 4.2:+13557422 MS.gene08840:CDS
GGACACAATTGACAATGTAA+AGG 0.580955 4.2:+13556890 MS.gene08840:CDS
GGACACAATTGACAATGTAA+AGG 0.580955 4.2:+13557118 MS.gene08840:CDS
GGAAGCAGTTAGAGGATGGA+AGG 0.581888 4.2:+13557426 MS.gene08840:CDS
GTCAGAGCTCTCCACCTCAA+GGG 0.584759 4.2:-13556642 None:intergenic
GCCAAGATTCAAGACAAGGA+AGG 0.584836 4.2:+13556455 MS.gene08840:CDS
TGAGCCTCTGCTGGTCTGGA+GGG 0.585228 4.2:-13556938 None:intergenic
ATATTTGTGAAGACTCTCAC+AGG 0.586971 4.2:+13556608 MS.gene08840:CDS
TCTGAATGTTGTAGTCAGCA+AGG 0.587752 4.2:-13557451 None:intergenic
TTTGCATACCACCACGGAGA+CGG 0.590718 4.2:-13556586 None:intergenic
CACCGCGTAGACGCAAAACA+AGG 0.597104 4.2:-13557034 None:intergenic
GCATACCTCCCCTCAAACGA+AGG 0.599519 4.2:-13557268 None:intergenic
TGAGACGCTGCTGGTCAGGT+GGG 0.600727 4.2:-13556481 None:intergenic
GGTGATAGTCTTGCCAGTGA+GGG 0.602372 4.2:-13556393 None:intergenic
CTGAATGTTGTAGTCAGCAA+GGG 0.603128 4.2:-13557450 None:intergenic
ATCTGAACTCTCAACTTCGA+GGG 0.604795 4.2:-13556414 None:intergenic
GGGTGATAGTCTTGCCAGTG+AGG 0.607788 4.2:-13556394 None:intergenic
TCAACCTCTGCTGATCTGGT+GGG 0.608097 4.2:-13557394 None:intergenic
AAAGACGATCACCCTTGAGG+TGG 0.610322 4.2:+13556631 MS.gene08840:CDS
CTTGTACTGCGTCTTCGTGG+TGG 0.623483 4.2:+13557491 MS.gene08840:CDS
GGCTAAGATACAGGACAAGG+AGG 0.626054 4.2:+13556911 MS.gene08840:CDS
GCAAAGATACAGGACAAAGA+GGG 0.627998 4.2:+13556683 MS.gene08840:CDS
CAAATATTTGCATACCACCA+CGG 0.635399 4.2:-13556592 None:intergenic
GAGACGGAGCACCAAATGAA+GGG 0.636030 4.2:-13556570 None:intergenic
CATTTGGTGCTCCGTCTCCG+TGG 0.643371 4.2:+13556575 MS.gene08840:CDS
GGCTAAGATACAGGACAAGG+AGG 0.643758 4.2:+13557139 MS.gene08840:CDS
TTGGTGCTCCGTCTCCGTGG+TGG 0.645961 4.2:+13556578 MS.gene08840:CDS
CAAACGAAGGACAAGGTGGA+GGG 0.650317 4.2:-13557255 None:intergenic
CTCCCCTCAAACGAAGGACA+AGG 0.650568 4.2:-13557262 None:intergenic
GCTAAGATACAGGACAAGGA+GGG 0.651009 4.2:+13557140 MS.gene08840:CDS
TAAGGCCAAGATTCAAGACA+AGG 0.652210 4.2:+13556451 MS.gene08840:CDS
TGACACCATTGACAATGTCA+AGG 0.652358 4.2:+13556661 MS.gene08840:CDS
CCCTCAAACGAAGGACAAGG+TGG 0.653409 4.2:-13557259 None:intergenic
GCTAAGATACAGGACAAGGA+GGG 0.656722 4.2:+13556912 MS.gene08840:CDS
GTATCCCTCCAGACCAGCAG+AGG 0.657865 4.2:+13556934 MS.gene08840:CDS
TGCTGACTACAACATTCAGA+AGG 0.660012 4.2:+13557454 MS.gene08840:CDS
GAATCCCACCAGATCAGCAG+AGG 0.663372 4.2:+13557390 MS.gene08840:CDS
AGGAAAGACGATCACCCTTG+AGG 0.677774 4.2:+13556628 MS.gene08840:CDS
CGGAAAGACCATTACCCTAG+AGG 0.694589 4.2:+13557313 MS.gene08840:CDS
AAAGGCTAAGATACAGGACA+AGG 0.696274 4.2:+13556908 MS.gene08840:CDS
AAAGGCTAAGATACAGGACA+AGG 0.696274 4.2:+13557136 MS.gene08840:CDS
CTTGTGTTGCGACTTCGTGG+TGG 0.707503 4.2:+13556807 MS.gene08840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TGAATATTATAATCAGCCAA+AGG - chr4.2:13556768-13556787 None:intergenic 25.0%
AGATACCATAGACAATGTTA+AGG + chr4.2:13556433-13556452 MS.gene08840:CDS 30.0%
ATATTTGTGAAGACATTGAC+CGG + chr4.2:13557293-13557312 MS.gene08840:CDS 30.0%
TAACGTAAAGGCAAAAATAC+AGG + chr4.2:13557358-13557377 MS.gene08840:CDS 30.0%
TACCGGAAAAACAATTACTT+TGG + chr4.2:13556854-13556873 MS.gene08840:CDS 30.0%
TGCAGATTATAACATCCAAA+AGG + chr4.2:13556541-13556560 MS.gene08840:CDS 30.0%
TTGGATGTTATAATCTGCAA+GGG - chr4.2:13556540-13556559 None:intergenic 30.0%
TTTGGATGTTATAATCTGCA+AGG - chr4.2:13556541-13556560 None:intergenic 30.0%
!! AAGTAATTGTTTTTCCGGTA+AGG - chr4.2:13556854-13556873 None:intergenic 30.0%
!! AGACACAATTGATAACGTAA+AGG + chr4.2:13557346-13557365 MS.gene08840:CDS 30.0%
!! AGTAATTGTTTTTCCGGTAA+GGG - chr4.2:13556853-13556872 None:intergenic 30.0%
!! CTCCAAAGTAATTGTTTTTC+CGG - chr4.2:13556859-13556878 None:intergenic 30.0%
AAAATCAATCTTTGCTGGTC+TGG - chr4.2:13557173-13557192 None:intergenic 35.0%
AAAGGCAAAAATACAGGACA+AGG + chr4.2:13557364-13557383 MS.gene08840:CDS 35.0%
ATATTTGTGAAGACTCTCAC+AGG + chr4.2:13556608-13556627 MS.gene08840:CDS 35.0%
CAAATATTTGCATACCACCA+CGG - chr4.2:13556595-13556614 None:intergenic 35.0%
CAATGTAAAGGCTAAGATAC+AGG + chr4.2:13556902-13556921 MS.gene08840:CDS 35.0%
CAGCAAAAATCAATCTTTGC+TGG - chr4.2:13557178-13557197 None:intergenic 35.0%
CGGAAAAACAATTACTTTGG+AGG + chr4.2:13556857-13556876 MS.gene08840:CDS 35.0%
GGACACAATTGACAATGTAA+AGG + chr4.2:13556890-13556909 MS.gene08840:CDS 35.0%
TACTGGCAAGACAATTACTT+TGG + chr4.2:13557082-13557101 MS.gene08840:CDS 35.0%
TGTTATAATCAGCAAGAGTC+CGG - chr4.2:13557220-13557239 None:intergenic 35.0%
! AAATCAATCTTTGCTGGTCT+GGG - chr4.2:13557172-13557191 None:intergenic 35.0%
! ATTTTTGCGAAGACTCTTAC+TGG + chr4.2:13557065-13557084 MS.gene08840:CDS 35.0%
! ATTTTTGTGAAGACCCTTAC+CGG + chr4.2:13556837-13556856 MS.gene08840:CDS 35.0%
! ATTTTTGTTAAGACCCTCAC+TGG + chr4.2:13556380-13556399 MS.gene08840:CDS 35.0%
!! CAGCAAAGATTGATTTTTGC+TGG + chr4.2:13557176-13557195 MS.gene08840:CDS 35.0%
AAAGGAGTCTACCCTTCATT+TGG + chr4.2:13556559-13556578 MS.gene08840:CDS 40.0%
AAAGGCTAAGATACAGGACA+AGG + chr4.2:13556908-13556927 MS.gene08840:CDS 40.0%
ATCTGAACTCTCAACTTCGA+GGG - chr4.2:13556417-13556436 None:intergenic 40.0%
CAATGTCAAGGCAAAGATAC+AGG + chr4.2:13556673-13556692 MS.gene08840:CDS 40.0%
CCAAGATTCAAGACAAGGAA+GGG + chr4.2:13556456-13556475 MS.gene08840:CDS 40.0%
CTGAATGTTGTAGTCAGCAA+GGG - chr4.2:13557453-13557472 None:intergenic 40.0%
CTTTGCCTTGACATTGTCAA+TGG - chr4.2:13556669-13556688 None:intergenic 40.0%
GCAAAAATACAGGACAAGGA+GGG + chr4.2:13557368-13557387 MS.gene08840:CDS 40.0%
GCAAAGATACAGGACAAAGA+GGG + chr4.2:13556683-13556702 MS.gene08840:CDS 40.0%
GCTGGAAAACAACTTGAAGA+TGG + chr4.2:13556737-13556756 MS.gene08840:intron 40.0%
GTCTGAACTTTCTACCTCTA+GGG - chr4.2:13557330-13557349 None:intergenic 40.0%
TAAGGCCAAGATTCAAGACA+AGG + chr4.2:13556451-13556470 MS.gene08840:CDS 40.0%
TATCTGAACTCTCAACTTCG+AGG - chr4.2:13556418-13556437 None:intergenic 40.0%
TCTGAATGTTGTAGTCAGCA+AGG - chr4.2:13557454-13557473 None:intergenic 40.0%
TGACACCATTGACAATGTCA+AGG + chr4.2:13556661-13556680 MS.gene08840:CDS 40.0%
TGGCAAGACAATTACTTTGG+AGG + chr4.2:13557085-13557104 MS.gene08840:CDS 40.0%
TGTCTGAACTTTCTACCTCT+AGG - chr4.2:13557331-13557350 None:intergenic 40.0%
! AATCAATCTTTGCTGGTCTG+GGG - chr4.2:13557171-13557190 None:intergenic 40.0%
! AATGAAGGGTAGACTCCTTT+TGG - chr4.2:13556559-13556578 None:intergenic 40.0%
! TGCTGACTACAACATTCAGA+AGG + chr4.2:13557454-13557473 MS.gene08840:CDS 40.0%
!! ACTTTCTACCTCTAGGGTAA+TGG - chr4.2:13557324-13557343 None:intergenic 40.0%
!! CTTGGCCTTAACATTGTCTA+TGG - chr4.2:13556441-13556460 None:intergenic 40.0%
AAGATCAACCTCTGCTGATC+TGG - chr4.2:13557401-13557420 None:intergenic 45.0%
CCCTTCCTTGTCTTGAATCT+TGG - chr4.2:13556459-13556478 None:intergenic 45.0%
CTTGAAGATGGCAGAACCTT+TGG + chr4.2:13556749-13556768 MS.gene08840:intron 45.0%
GCCAAGATTCAAGACAAGGA+AGG + chr4.2:13556455-13556474 MS.gene08840:CDS 45.0%
GCTAAGATACAGGACAAGGA+GGG + chr4.2:13556912-13556931 MS.gene08840:CDS 45.0%
GGCAAAAATACAGGACAAGG+AGG + chr4.2:13557367-13557386 MS.gene08840:CDS 45.0%
GGCAAAGATACAGGACAAAG+AGG + chr4.2:13556682-13556701 MS.gene08840:CDS 45.0%
! AGCAGAGGTTGATCTTTGCT+GGG + chr4.2:13557405-13557424 MS.gene08840:CDS 45.0%
! ATCAATCTTTGCTGGTCTGG+GGG - chr4.2:13557170-13557189 None:intergenic 45.0%
! GGTGAAGAGTTGACTCTTTC+TGG - chr4.2:13557016-13557035 None:intergenic 45.0%
! TACTTTGGAGGTAGAGAGCT+CGG + chr4.2:13556869-13556888 MS.gene08840:CDS 45.0%
!! CTCTAGGGTAATGGTCTTTC+CGG - chr4.2:13557315-13557334 None:intergenic 45.0%
AAAATGAGACGCTGCTGGTC+AGG - chr4.2:13556488-13556507 None:intergenic 50.0%
AAAATGAGCCTCTGCTGGTC+TGG - chr4.2:13556945-13556964 None:intergenic 50.0%
AAAGACGATCACCCTTGAGG+TGG + chr4.2:13556631-13556650 MS.gene08840:CDS 50.0%
AAGATGAGCCTCTGCTGATC+TGG - chr4.2:13556716-13556735 None:intergenic 50.0%
AGGAAAGACGATCACCCTTG+AGG + chr4.2:13556628-13556647 MS.gene08840:CDS 50.0%
ATCAACCTCTGCTGATCTGG+TGG - chr4.2:13557398-13557417 None:intergenic 50.0%
CAAACGAAGGACAAGGTGGA+GGG - chr4.2:13557258-13557277 None:intergenic 50.0%
CACCTTGTCCTTCGTTTGAG+GGG + chr4.2:13557260-13557279 MS.gene08840:CDS 50.0%
CACGAAGTCGCAACACAAGA+TGG - chr4.2:13556806-13556825 None:intergenic 50.0%
CAGCAAAAATGAGACGCTGC+TGG - chr4.2:13556493-13556512 None:intergenic 50.0%
CAGCAAAAATGAGCCTCTGC+TGG - chr4.2:13556950-13556969 None:intergenic 50.0%
CATCTTGTGTTGCGACTTCG+TGG + chr4.2:13556804-13556823 MS.gene08840:CDS 50.0%
CCACCTTGTCCTTCGTTTGA+GGG + chr4.2:13557259-13557278 MS.gene08840:CDS 50.0%
CGGAAAGACCATTACCCTAG+AGG + chr4.2:13557313-13557332 MS.gene08840:CDS 50.0%
CTTTGCTGGGAAGCAGTTAG+AGG + chr4.2:13557418-13557437 MS.gene08840:CDS 50.0%
GAAAGCAGCTTGAAGATGGC+CGG + chr4.2:13557198-13557217 MS.gene08840:CDS 50.0%
GCTGGAAAGCAGCTTGAAGA+TGG + chr4.2:13557194-13557213 MS.gene08840:CDS 50.0%
GGAAGCAGTTAGAGGATGGA+AGG + chr4.2:13557426-13557445 MS.gene08840:CDS 50.0%
GGCTAAGATACAGGACAAGG+AGG + chr4.2:13556911-13556930 MS.gene08840:CDS 50.0%
TCAAACGAAGGACAAGGTGG+AGG - chr4.2:13557259-13557278 None:intergenic 50.0%
TCAACCTCTGCTGATCTGGT+GGG - chr4.2:13557397-13557416 None:intergenic 50.0%
TCCACCTTGTCCTTCGTTTG+AGG + chr4.2:13557258-13557277 MS.gene08840:CDS 50.0%
TTTGCATACCACCACGGAGA+CGG - chr4.2:13556589-13556608 None:intergenic 50.0%
! CAGCAGAGGTTGATCTTTGC+TGG + chr4.2:13557404-13557423 MS.gene08840:CDS 50.0%
! CATTTTTGCTGGCAAGCAGC+TGG + chr4.2:13556502-13556521 MS.gene08840:CDS 50.0%
! GAGACGGAGCACCAAATGAA+GGG - chr4.2:13556573-13556592 None:intergenic 50.0%
! GGTGATAGTCTTGCCAGTGA+GGG - chr4.2:13556396-13556415 None:intergenic 50.0%
!! CAGCAGAGGCTCATTTTTGC+TGG + chr4.2:13556948-13556967 MS.gene08840:CDS 50.0%
!! CAGCAGCGTCTCATTTTTGC+TGG + chr4.2:13556491-13556510 MS.gene08840:CDS 50.0%
!!! CACCTTGTTTTGCGTCTACG+CGG + chr4.2:13557032-13557051 MS.gene08840:CDS 50.0%
ATGAGCCTCTGCTGATCTGG+TGG - chr4.2:13556713-13556732 None:intergenic 55.0%
CACCACGAAGACGCAGTACA+AGG - chr4.2:13557493-13557512 None:intergenic 55.0%
CACCGCGTAGACGCAAAACA+AGG - chr4.2:13557037-13557056 None:intergenic 55.0%
CACCTTGTACTGCGTCTTCG+TGG + chr4.2:13557488-13557507 MS.gene08840:CDS 55.0%
CAGCAGAGGCTCATCTTTGC+TGG + chr4.2:13556719-13556738 MS.gene08840:intron 55.0%
CCCTCAAACGAAGGACAAGG+TGG - chr4.2:13557262-13557281 None:intergenic 55.0%
CTCCCCTCAAACGAAGGACA+AGG - chr4.2:13557265-13557284 None:intergenic 55.0%
CTTGTACTGCGTCTTCGTGG+TGG + chr4.2:13557491-13557510 MS.gene08840:CDS 55.0%
CTTGTCCTTCGTTTGAGGGG+AGG + chr4.2:13557263-13557282 MS.gene08840:CDS 55.0%
CTTGTGTTGCGACTTCGTGG+TGG + chr4.2:13556807-13556826 MS.gene08840:CDS 55.0%
GAAAGCAGCTCGAAGATGGC+AGG + chr4.2:13556970-13556989 MS.gene08840:CDS 55.0%
GAATCCCACCAGATCAGCAG+AGG + chr4.2:13557390-13557409 MS.gene08840:CDS 55.0%
GCATACCTCCCCTCAAACGA+AGG - chr4.2:13557271-13557290 None:intergenic 55.0%
GCTGGAAAGCAGCTCGAAGA+TGG + chr4.2:13556966-13556985 MS.gene08840:CDS 55.0%
GCTGGGAAGCAGTTAGAGGA+TGG + chr4.2:13557422-13557441 MS.gene08840:CDS 55.0%
GTATCCCACCAGATCAGCAG+AGG + chr4.2:13556705-13556724 MS.gene08840:intron 55.0%
GTCAGAGCTCTCCACCTCAA+GGG - chr4.2:13556645-13556664 None:intergenic 55.0%
TGAGCCTCTGCTGATCTGGT+GGG - chr4.2:13556712-13556731 None:intergenic 55.0%
TGTCAGAGCTCTCCACCTCA+AGG - chr4.2:13556646-13556665 None:intergenic 55.0%
! GGAGACGGAGCACCAAATGA+AGG - chr4.2:13556574-13556593 None:intergenic 55.0%
! GGGTGATAGTCTTGCCAGTG+AGG - chr4.2:13556397-13556416 None:intergenic 55.0%
! TTTTGCTGGCAAGCAGCTGG+AGG + chr4.2:13556505-13556524 MS.gene08840:CDS 55.0%
!!! CTTGTTTTGCGTCTACGCGG+TGG + chr4.2:13557035-13557054 MS.gene08840:CDS 55.0%
ATGAGACGCTGCTGGTCAGG+TGG - chr4.2:13556485-13556504 None:intergenic 60.0%
CTGGCAAGCAGCTGGAGGAT+GGG + chr4.2:13556510-13556529 MS.gene08840:CDS 60.0%
GTATCCCTCCAGACCAGCAG+AGG + chr4.2:13556934-13556953 MS.gene08840:CDS 60.0%
TGAGACGCTGCTGGTCAGGT+GGG - chr4.2:13556484-13556503 None:intergenic 60.0%
! ATGAGCCTCTGCTGGTCTGG+AGG - chr4.2:13556942-13556961 None:intergenic 60.0%
! TGAGCCTCTGCTGGTCTGGA+GGG - chr4.2:13556941-13556960 None:intergenic 60.0%
!! CATTTGGTGCTCCGTCTCCG+TGG + chr4.2:13556575-13556594 MS.gene08840:CDS 60.0%
GCTGGCAAGCAGCTGGAGGA+TGG + chr4.2:13556509-13556528 MS.gene08840:CDS 65.0%
! TTGGTGCTCCGTCTCCGTGG+TGG + chr4.2:13556578-13556597 MS.gene08840:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 13556374 13557520 13556374 ID=MS.gene08840
chr4.2 mRNA 13556374 13557520 13556374 ID=MS.gene08840.t1;Parent=MS.gene08840
chr4.2 exon 13556374 13556704 13556374 ID=MS.gene08840.t1.exon1;Parent=MS.gene08840.t1
chr4.2 CDS 13556374 13556704 13556374 ID=cds.MS.gene08840.t1;Parent=MS.gene08840.t1
chr4.2 exon 13556793 13557520 13556793 ID=MS.gene08840.t1.exon2;Parent=MS.gene08840.t1
chr4.2 CDS 13556793 13557520 13556793 ID=cds.MS.gene08840.t1;Parent=MS.gene08840.t1
Gene Sequence

>MS.gene08840

ATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACTATCACCCTCGAAGTTGAGAGTTCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAGCAGCGTCTCATTTTTGCTGGCAAGCAGCTGGAGGATGGGCGTACCCTTGCAGATTATAACATCCAAAAGGAGTCTACCCTTCATTTGGTGCTCCGTCTCCGTGGTGGTATGCAAATATTTGTGAAGACTCTCACAGGAAAGACGATCACCCTTGAGGTGGAGAGCTCTGACACCATTGACAATGTCAAGGCAAAGATACAGGACAAAGAGGGTATCCCACCAGATCAGCAGAGGCTCATCTTTGCTGGAAAACAACTTGAAGATGGCAGAACCTTTGGCTGATTATAATATTCAGAAAGAGTCAACTCTCCATCTTGTGTTGCGACTTCGTGGTGGTATGCAGATTTTTGTGAAGACCCTTACCGGAAAAACAATTACTTTGGAGGTAGAGAGCTCGGACACAATTGACAATGTAAAGGCTAAGATACAGGACAAGGAGGGTATCCCTCCAGACCAGCAGAGGCTCATTTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACTCTTGCTGATTACAACATCCAGAAAGAGTCAACTCTTCACCTTGTTTTGCGTCTACGCGGTGGTATGCAGATTTTTGCGAAGACTCTTACTGGCAAGACAATTACTTTGGAGGTAGAGAGCTCGGACACAATTGACAATGTAAAGGCTAAGATACAGGACAAGGAGGGCATTCCCCCAGACCAGCAAAGATTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGGACTCTTGCTGATTATAACATTCAGAAAGAGTCTACCCTCCACCTTGTCCTTCGTTTGAGGGGAGGTATGCAGATATTTGTGAAGACATTGACCGGAAAGACCATTACCCTAGAGGTAGAAAGTTCAGACACAATTGATAACGTAAAGGCAAAAATACAGGACAAGGAGGGAATCCCACCAGATCAGCAGAGGTTGATCTTTGCTGGGAAGCAGTTAGAGGATGGAAGGACCCTTGCTGACTACAACATTCAGAAGGAGTCTACACTTCACCTTGTACTGCGTCTTCGTGGTGGAAATTAA
Protein sequence

>MS.gene08840.t1

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFAKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGN