Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08841.t1 | XP_013446614.1 | 93.1 | 955 | 59 | 3 | 1 | 953 | 1 | 950 | 0.00E+00 | 1681 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08841.t1 | A0A072TTW9 | 93.1 | 955 | 59 | 3 | 1 | 953 | 1 | 950 | 0.0e+00 | 1681.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene08841.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051248 | MS.gene08841 | 0.829138 | 6.09E-55 | -1.69E-46 |
| MS.gene056228 | MS.gene08841 | 0.843522 | 1.33E-58 | -1.69E-46 |
| MS.gene059154 | MS.gene08841 | 0.800448 | 1.43E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08841.t1 | MTR_8g081010 | 93.089 | 955 | 59 | 3 | 1 | 953 | 1 | 950 | 0.0 | 1769 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08841.t1 | AT4G14200 | 39.474 | 152 | 80 | 7 | 802 | 948 | 639 | 783 | 7.29e-17 | 86.3 |
| MS.gene08841.t1 | AT4G14200 | 40.678 | 118 | 53 | 4 | 1 | 104 | 1 | 115 | 1.09e-14 | 79.3 |
Find 179 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATCTGAACCATTGAAAT+TGG | 0.207181 | 4.2:-13569427 | None:intergenic |
| AATTGAAGAGCAGACCATTT+TGG | 0.229250 | 4.2:+13573447 | MS.gene08841:CDS |
| AGCAATCAAGTGAGTTATTT+AGG | 0.233180 | 4.2:+13572160 | MS.gene08841:CDS |
| CACACCTCTCAAGAGTCTTT+TGG | 0.235302 | 4.2:+13573235 | MS.gene08841:CDS |
| TGAGCCTCGTTCGTGATTAT+TGG | 0.239007 | 4.2:-13571496 | None:intergenic |
| TCTGCAATTGAGCTTGTTAA+TGG | 0.247434 | 4.2:-13571073 | None:intergenic |
| TCTGCTCTGGTTTGTTATCT+TGG | 0.248157 | 4.2:-13573201 | None:intergenic |
| ACAACTGTTAACTCAATTCT+TGG | 0.264032 | 4.2:+13573323 | MS.gene08841:CDS |
| CTTCTTGAGGAAATTCATAC+TGG | 0.270881 | 4.2:-13571465 | None:intergenic |
| TTGGAAGGCAACTGGGGTTC+TGG | 0.273219 | 4.2:+13572747 | MS.gene08841:CDS |
| GTTTCAGAAGTGGCGCCTTT+AGG | 0.278629 | 4.2:-13573071 | None:intergenic |
| TCAACCTGAAAGTAGTTTAA+TGG | 0.282089 | 4.2:+13571939 | MS.gene08841:CDS |
| GGCAACTGGGGTTCTGGTTC+AGG | 0.286704 | 4.2:+13572753 | MS.gene08841:CDS |
| GAGACCATTAAACTACTTTC+AGG | 0.293411 | 4.2:-13571943 | None:intergenic |
| TCATCAGGTCCATGCTCTTC+AGG | 0.294935 | 4.2:-13571901 | None:intergenic |
| TTCTTCTTTGTAACCTTCAA+TGG | 0.299986 | 4.2:-13569400 | None:intergenic |
| TTGGTTAAACTTGGTTCATC+TGG | 0.315047 | 4.2:+13572453 | MS.gene08841:CDS |
| AGATTGCTCTGAAGTTTCTT+TGG | 0.316918 | 4.2:+13571798 | MS.gene08841:CDS |
| AGTGATGATGCTGGTGAAAA+TGG | 0.319856 | 4.2:+13572189 | MS.gene08841:CDS |
| CACATTCTTCTATAAATTCC+GGG | 0.326461 | 4.2:+13572562 | MS.gene08841:CDS |
| TGCTGAGCTTTCTGCTGAAC+TGG | 0.337647 | 4.2:+13572371 | MS.gene08841:CDS |
| ATAGAAGAAAATAATGGTTC+TGG | 0.341669 | 4.2:+13573296 | MS.gene08841:CDS |
| CACCACTTCTTTCACTCAAC+TGG | 0.342727 | 4.2:-13571714 | None:intergenic |
| TCACATTCTTCTATAAATTC+CGG | 0.344140 | 4.2:+13572561 | MS.gene08841:CDS |
| CGTAATAACTTGGTTAAACT+TGG | 0.353416 | 4.2:+13572444 | MS.gene08841:CDS |
| TTAGCACTGGGATGTGGATT+TGG | 0.364827 | 4.2:-13569345 | None:intergenic |
| TTGATAACCTGATTTAAAGT+TGG | 0.365804 | 4.2:-13573140 | None:intergenic |
| TTGGTTCCCAACTTTAAATC+AGG | 0.378256 | 4.2:+13573133 | MS.gene08841:CDS |
| CTCTTCAGAGATGCATGTTA+TGG | 0.379248 | 4.2:+13571741 | MS.gene08841:CDS |
| TGATAACCTGATTTAAAGTT+GGG | 0.381863 | 4.2:-13573139 | None:intergenic |
| GTGACAGTTTGGAAGGCAAC+TGG | 0.392700 | 4.2:+13572739 | MS.gene08841:CDS |
| CAAGTTTAACCAAGTTATTA+CGG | 0.395077 | 4.2:-13572443 | None:intergenic |
| AGTACCTGGAGTGTGAGTTT+TGG | 0.401290 | 4.2:-13569065 | None:intergenic |
| AAACTTGATGCAGCTTATCC+TGG | 0.402018 | 4.2:+13571628 | MS.gene08841:CDS |
| TGCTGACTCGCACGAAGAAC+AGG | 0.402380 | 4.2:+13572281 | MS.gene08841:CDS |
| TCTGCTGTTGAAGATAATTC+AGG | 0.412258 | 4.2:+13572603 | MS.gene08841:CDS |
| TTACGGCTTTGATCTTGAAC+AGG | 0.414539 | 4.2:-13572426 | None:intergenic |
| CAAACCAACTGTATCCAAAA+TGG | 0.416729 | 4.2:-13573461 | None:intergenic |
| ATATTGGCAGGATATCTTGC+TGG | 0.417233 | 4.2:-13573407 | None:intergenic |
| GCCGTTGAAGATGATTCAAT+TGG | 0.419479 | 4.2:+13572399 | MS.gene08841:CDS |
| TGTGCTCTTTACTTCTGCTC+TGG | 0.421478 | 4.2:-13573214 | None:intergenic |
| TTCTGTCGATGCCAGCGAAC+CGG | 0.422453 | 4.2:-13572925 | None:intergenic |
| AAAAGACAGGGTTGAAATCA+TGG | 0.423875 | 4.2:+13571297 | MS.gene08841:CDS |
| TCTGTAGTTGGAAAGGTTGC+AGG | 0.429209 | 4.2:+13572060 | MS.gene08841:CDS |
| TCTCAGCAGGTGCAGCTTGT+CGG | 0.429317 | 4.2:-13572971 | None:intergenic |
| TGGTAGCCGGTGTGACAGTT+TGG | 0.431702 | 4.2:+13572728 | MS.gene08841:CDS |
| TATCAAATATCGCATGAAAT+CGG | 0.433804 | 4.2:+13571841 | MS.gene08841:CDS |
| GAACTTTCATGAATTTCATC+AGG | 0.435012 | 4.2:-13571916 | None:intergenic |
| CTTTGATCATCAACCGGCAT+TGG | 0.437615 | 4.2:-13572651 | None:intergenic |
| GGTGATTTCGGCTTGTTGCT+AGG | 0.438775 | 4.2:-13573269 | None:intergenic |
| CATCGCCCATGTCATGATCC+AGG | 0.443193 | 4.2:-13571390 | None:intergenic |
| GAAGAACAAACCAATTTCAA+TGG | 0.450290 | 4.2:+13569417 | MS.gene08841:CDS |
| CCAGACAGCTGTCTCTCAGC+AGG | 0.450792 | 4.2:-13572984 | None:intergenic |
| AACAATGACAAGGGTAATGA+TGG | 0.452738 | 4.2:+13569628 | MS.gene08841:CDS |
| CATACTGGGGCAGCAAAGAA+AGG | 0.454900 | 4.2:-13571450 | None:intergenic |
| AGATCAAAGCCGTAATAACT+TGG | 0.457575 | 4.2:+13572434 | MS.gene08841:CDS |
| GTGGAAACTTTACCATCAAC+CGG | 0.458357 | 4.2:+13572906 | MS.gene08841:CDS |
| TTATTGCTTTGATCATCAAC+CGG | 0.463154 | 4.2:-13572657 | None:intergenic |
| CCTGCTGAGAGACAGCTGTC+TGG | 0.465983 | 4.2:+13572984 | MS.gene08841:CDS |
| AAGATCTGTGGAACCATTGA+AGG | 0.466676 | 4.2:+13569387 | MS.gene08841:CDS |
| AATAATCACGAACGAGGCTC+AGG | 0.471738 | 4.2:+13571498 | MS.gene08841:CDS |
| TCAACTGAAACATCAGTTCC+AGG | 0.471862 | 4.2:-13572702 | None:intergenic |
| TTCAGAGGGAGGCATCCTTT+CGG | 0.472376 | 4.2:+13571977 | MS.gene08841:CDS |
| CCGAAGGAAAAGAAGGAACC+TGG | 0.472419 | 4.2:+13571424 | MS.gene08841:CDS |
| TTATTGTCATGCACAGGAAG+TGG | 0.472880 | 4.2:-13571607 | None:intergenic |
| TCGCTGGCATCGACAGAAGC+AGG | 0.479023 | 4.2:+13572930 | MS.gene08841:CDS |
| CTATGTTTAGCACTGGGATG+TGG | 0.480805 | 4.2:-13569351 | None:intergenic |
| GAGTCAACTGATAACGTTGT+AGG | 0.484509 | 4.2:+13571319 | MS.gene08841:CDS |
| GATGCCAGCGAACCGGTTGA+TGG | 0.485197 | 4.2:-13572918 | None:intergenic |
| AAATGTGACAGATTGTAGTT+TGG | 0.486137 | 4.2:+13571222 | MS.gene08841:CDS |
| AGCACGTCTATGTTTAGCAC+TGG | 0.486588 | 4.2:-13569358 | None:intergenic |
| ATAAACGATGCATCTGTAGT+TGG | 0.487241 | 4.2:+13572048 | MS.gene08841:CDS |
| TGTTTCAATGACACGCTCCC+AGG | 0.489066 | 4.2:-13571646 | None:intergenic |
| TAGTTTGGTGTGTGATGAAA+AGG | 0.493906 | 4.2:+13571237 | MS.gene08841:CDS |
| TTTACCATCAACCGGTTCGC+TGG | 0.495747 | 4.2:+13572914 | MS.gene08841:CDS |
| CTGGGATGTGGATTTGGAAA+AGG | 0.498306 | 4.2:-13569339 | None:intergenic |
| AAGAAAAGGCTGCAAATGAA+TGG | 0.500017 | 4.2:+13573378 | MS.gene08841:CDS |
| TTCACCACTTGAGTCGCTGA+AGG | 0.507100 | 4.2:-13573356 | None:intergenic |
| TCAACCAATGTTGTGAAAGA+TGG | 0.508206 | 4.2:-13573029 | None:intergenic |
| TTGCTTGAGCTAGCAATAAG+TGG | 0.508743 | 4.2:-13570950 | None:intergenic |
| TCGAGCATTGTGCATGGCGA+TGG | 0.514932 | 4.2:+13571112 | MS.gene08841:CDS |
| TTCTGGCAATAAATTGGGCA+TGG | 0.515055 | 4.2:-13571179 | None:intergenic |
| CTGGATCATGACATGGGCGA+TGG | 0.517009 | 4.2:+13571391 | MS.gene08841:CDS |
| AGCCACGTGGCTAGTCCTAA+AGG | 0.521301 | 4.2:+13573056 | MS.gene08841:CDS |
| TCAAATTCCACCTCACCTGC+TGG | 0.525174 | 4.2:+13573110 | MS.gene08841:CDS |
| TTTCAGTTGACTCTGGTAGC+CGG | 0.527228 | 4.2:+13572715 | MS.gene08841:CDS |
| TTCTTGAGGAAATTCATACT+GGG | 0.527999 | 4.2:-13571464 | None:intergenic |
| TGACAGTTTGGAAGGCAACT+GGG | 0.529077 | 4.2:+13572740 | MS.gene08841:CDS |
| ATTGGCGAGTTTACTTCTTG+AGG | 0.530675 | 4.2:-13571478 | None:intergenic |
| TGCTGACTCACATGAAGCAC+GGG | 0.531804 | 4.2:+13572488 | MS.gene08841:CDS |
| GAAAAGGAGCTTAATTTGAA+AGG | 0.533754 | 4.2:+13571253 | MS.gene08841:CDS |
| ATTCCACCTCACCTGCTGGT+TGG | 0.534757 | 4.2:+13573114 | MS.gene08841:CDS |
| AACTTGATGCAGCTTATCCT+GGG | 0.536306 | 4.2:+13571629 | MS.gene08841:CDS |
| TCAAGTTTATTGTCATGCAC+AGG | 0.536620 | 4.2:-13571613 | None:intergenic |
| CGATGCATCTGTAGTTGGAA+AGG | 0.537909 | 4.2:+13572053 | MS.gene08841:CDS |
| CCTTGACTTAGTCCACTATC+CGG | 0.539328 | 4.2:-13569712 | None:intergenic |
| TGTTAATCCGAAGGAAAAGA+AGG | 0.543340 | 4.2:+13571417 | MS.gene08841:CDS |
| GACTCAAGTGGTGAAAGAAA+AGG | 0.544512 | 4.2:+13573364 | MS.gene08841:CDS |
| TTAGGACTAGCCACGTGGCT+AGG | 0.544783 | 4.2:-13573053 | None:intergenic |
| AGTTACTGCTGTGCCAATGC+CGG | 0.545045 | 4.2:+13572638 | MS.gene08841:CDS |
| TTGACTAAATTAACTCCACC+TGG | 0.545904 | 4.2:+13572684 | MS.gene08841:CDS |
| TTTGAAGTGGGAAATATAGG+TGG | 0.546310 | 4.2:+13571016 | MS.gene08841:CDS |
| AGTTAACGAAGCAATTTCCC+TGG | 0.547977 | 4.2:+13571372 | MS.gene08841:CDS |
| GCTGCCATCTTTCACAACAT+TGG | 0.550986 | 4.2:+13573025 | MS.gene08841:CDS |
| TGAGTCGCTGAAGGGGACTC+AGG | 0.552611 | 4.2:-13573347 | None:intergenic |
| AAAGTTGGGAACCAACCAGC+AGG | 0.555674 | 4.2:-13573125 | None:intergenic |
| ACTGATGTTTCAGTTGACTC+TGG | 0.556029 | 4.2:+13572708 | MS.gene08841:CDS |
| GGGACGCAAAGTCAATTGCC+AGG | 0.557599 | 4.2:+13571037 | MS.gene08841:CDS |
| TACTACTTGTAATGAAGTCG+AGG | 0.558553 | 4.2:+13571546 | MS.gene08841:CDS |
| AATGGATCCACAGTAGAGCC+TGG | 0.560545 | 4.2:-13571055 | None:intergenic |
| TCACCACTTGAGTCGCTGAA+GGG | 0.563624 | 4.2:-13573355 | None:intergenic |
| TTGAAGTGGGAAATATAGGT+GGG | 0.565529 | 4.2:+13571017 | MS.gene08841:CDS |
| CTGCTGACTCACATGAAGCA+CGG | 0.565776 | 4.2:+13572487 | MS.gene08841:CDS |
| GTGATGTATACTTGCTGGCA+AGG | 0.567164 | 4.2:-13572542 | None:intergenic |
| AGAATGTGATGTATACTTGC+TGG | 0.568221 | 4.2:-13572547 | None:intergenic |
| GCTCAACTTCTGATTGCAAG+TGG | 0.572874 | 4.2:-13572140 | None:intergenic |
| AAAGGTTGCAGGAGCAGATG+TGG | 0.573435 | 4.2:+13572071 | MS.gene08841:CDS |
| ATACTGGGGCAGCAAAGAAA+GGG | 0.576595 | 4.2:-13571449 | None:intergenic |
| ATCATGTCGAGCAGAAGCCC+CGG | 0.577061 | 4.2:-13572580 | None:intergenic |
| AGGAATAATAGTGATGATGC+TGG | 0.577648 | 4.2:+13572180 | MS.gene08841:CDS |
| GGCAGCAAAGAAAGGGACCC+AGG | 0.578050 | 4.2:-13571442 | None:intergenic |
| ATTTAGTAGATCAGAAAGTG+AGG | 0.578447 | 4.2:+13569663 | MS.gene08841:CDS |
| CACCACTTGAGTCGCTGAAG+GGG | 0.579229 | 4.2:-13573354 | None:intergenic |
| ATGTGTGTCACAAATGTGGT+TGG | 0.583107 | 4.2:+13569316 | MS.gene08841:CDS |
| TCCAATTGAATCATCTTCAA+CGG | 0.583206 | 4.2:-13572400 | None:intergenic |
| TTCATCAGTCGCAGACCGAA+AGG | 0.585441 | 4.2:-13571992 | None:intergenic |
| GAAGAGAATAAGAAACCGAC+TGG | 0.585709 | 4.2:+13572252 | MS.gene08841:CDS |
| CAAGAACATAATTTGAACTC+AGG | 0.586642 | 4.2:+13569754 | MS.gene08841:CDS |
| CCGGATAGTGGACTAAGTCA+AGG | 0.586744 | 4.2:+13569712 | MS.gene08841:CDS |
| AATTTCCCTGGATCATGACA+TGG | 0.586997 | 4.2:+13571384 | MS.gene08841:CDS |
| AGCCGGTGTGACAGTTTGGA+AGG | 0.594892 | 4.2:+13572732 | MS.gene08841:CDS |
| GTTGGTTTGTTGCACAACAG+TGG | 0.595090 | 4.2:+13573475 | MS.gene08841:CDS |
| TGGGAACCAACCAGCAGGTG+AGG | 0.595709 | 4.2:-13573120 | None:intergenic |
| GGATGAACAGCTATCAGTGA+AGG | 0.597595 | 4.2:+13572302 | MS.gene08841:CDS |
| GTCCCCTTCAGCGACTCAAG+TGG | 0.599673 | 4.2:+13573352 | MS.gene08841:CDS |
| AGGGTAATGATGGAATTGAA+AGG | 0.601216 | 4.2:+13569638 | MS.gene08841:CDS |
| ATCAGTAACAGCGGGTACAT+CGG | 0.601777 | 4.2:-13572883 | None:intergenic |
| GCACGTCTATGTTTAGCACT+GGG | 0.604128 | 4.2:-13569357 | None:intergenic |
| CGATGGAGCTGTTAATCCGA+AGG | 0.607106 | 4.2:+13571408 | MS.gene08841:CDS |
| CTCAGCAAATGAATTTCAGA+GGG | 0.613657 | 4.2:+13571963 | MS.gene08841:CDS |
| ATCGCCCATGTCATGATCCA+GGG | 0.615636 | 4.2:-13571389 | None:intergenic |
| GAACCAACCAGCAGGTGAGG+TGG | 0.615820 | 4.2:-13573117 | None:intergenic |
| GACAGTTTGGAAGGCAACTG+GGG | 0.617067 | 4.2:+13572741 | MS.gene08841:CDS |
| GTTGTAGGTGAAACATATGA+AGG | 0.617101 | 4.2:+13571334 | MS.gene08841:CDS |
| GAGGTGGAATTTGACTGTTG+TGG | 0.618369 | 4.2:-13573101 | None:intergenic |
| CAAACCAAAACTCACACTCC+AGG | 0.620575 | 4.2:+13569061 | MS.gene08841:CDS |
| GATATCCTGCCAATATCAAG+AGG | 0.623854 | 4.2:+13573414 | MS.gene08841:CDS |
| GAAGAATCGAGCATTGTGCA+TGG | 0.624518 | 4.2:+13571106 | MS.gene08841:CDS |
| CGAAGGAAAAGAAGGAACCT+GGG | 0.625892 | 4.2:+13571425 | MS.gene08841:CDS |
| GTTTATGTGTGTCACAAATG+TGG | 0.626539 | 4.2:+13569312 | MS.gene08841:CDS |
| AGCAAATGAATTTCAGAGGG+AGG | 0.627525 | 4.2:+13571966 | MS.gene08841:CDS |
| ACATTCTTCTATAAATTCCG+GGG | 0.628281 | 4.2:+13572563 | MS.gene08841:CDS |
| GTTTCCACATCAGTAACAGC+GGG | 0.628983 | 4.2:-13572891 | None:intergenic |
| AATTGAATCATCTTCAACGG+CGG | 0.629840 | 4.2:-13572397 | None:intergenic |
| TGTACCCGCTGTTACTGATG+TGG | 0.638146 | 4.2:+13572887 | MS.gene08841:CDS |
| CGCCTTTAGGACTAGCCACG+TGG | 0.638553 | 4.2:-13573058 | None:intergenic |
| TCAATTGCCAGGCTCTACTG+TGG | 0.639109 | 4.2:+13571048 | MS.gene08841:CDS |
| TCTCAGCAAATGAATTTCAG+AGG | 0.641846 | 4.2:+13571962 | MS.gene08841:CDS |
| TGCCTTCCAAACTGTCACAC+CGG | 0.643818 | 4.2:-13572734 | None:intergenic |
| GGATGCACAACTGTTAGTGA+AGG | 0.645045 | 4.2:+13572509 | MS.gene08841:CDS |
| CGTGCTCACAAGAAGATCTG+TGG | 0.645475 | 4.2:+13569375 | MS.gene08841:CDS |
| AACCAGTTGAGTGAAAGAAG+TGG | 0.653078 | 4.2:+13571712 | MS.gene08841:CDS |
| GTTGGGTTCAAACAATGACA+AGG | 0.660340 | 4.2:+13569618 | MS.gene08841:CDS |
| CAACAGTGGATCCTCAGCGA+AGG | 0.662422 | 4.2:+13573489 | MS.gene08841:CDS |
| TCACCCAAAAGACTCTTGAG+AGG | 0.662449 | 4.2:-13573239 | None:intergenic |
| ATTTCCCTGGATCATGACAT+GGG | 0.666282 | 4.2:+13571385 | MS.gene08841:CDS |
| TCTTGAGGAAATTCATACTG+GGG | 0.669903 | 4.2:-13571463 | None:intergenic |
| ACATGAGGAACATGTTACTG+AGG | 0.675935 | 4.2:+13571666 | MS.gene08841:CDS |
| ATATCCTGCCAATATCAAGA+GGG | 0.682748 | 4.2:+13573415 | MS.gene08841:CDS |
| GAGCGTGTCATTGAAACATG+AGG | 0.691606 | 4.2:+13571651 | MS.gene08841:CDS |
| TAATTTGAAAGGAAGCGATG+AGG | 0.691934 | 4.2:+13571264 | MS.gene08841:CDS |
| CTCGCCAATAATCACGAACG+AGG | 0.692947 | 4.2:+13571492 | MS.gene08841:CDS |
| GATGATGATTACAAAACACC+AGG | 0.694441 | 4.2:+13569444 | MS.gene08841:CDS |
| TTGGGTTCAAACAATGACAA+GGG | 0.695404 | 4.2:+13569619 | MS.gene08841:CDS |
| GATTGCAAGTGGTCACTACG+AGG | 0.698031 | 4.2:-13572129 | None:intergenic |
| GAGTCAGCAGCAATACCAGT+CGG | 0.699186 | 4.2:-13572267 | None:intergenic |
| AGTTTCCACATCAGTAACAG+CGG | 0.700785 | 4.2:-13572892 | None:intergenic |
| ATTGGTTGAGCCTAGCCACG+TGG | 0.726239 | 4.2:+13573043 | MS.gene08841:CDS |
| ACTGAAACATCAGTTCCAGG+TGG | 0.735985 | 4.2:-13572699 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTGGATTTATAATT+TGG | - | chr4.2:13570982-13571001 | None:intergenic | 10.0% |
| !!! | TTTATAATCTTATATTGATT+TGG | + | chr4.2:13570351-13570370 | MS.gene08841:intron | 10.0% |
| !!! | TTTGTGTATTTTTTTTTTAA+GGG | + | chr4.2:13569274-13569293 | MS.gene08841:intron | 10.0% |
| !!! | TTTTGTGTATTTTTTTTTTA+AGG | + | chr4.2:13569273-13569292 | MS.gene08841:intron | 10.0% |
| !! | TTAAATAACACTCATAAAAA+GGG | - | chr4.2:13570077-13570096 | None:intergenic | 15.0% |
| !! | TTACAGATAAGAAAAAAATT+TGG | - | chr4.2:13570886-13570905 | None:intergenic | 15.0% |
| !!! | AAGTCATTAAATTTTAAACA+AGG | - | chr4.2:13570129-13570148 | None:intergenic | 15.0% |
| !!! | ATAATGTGTTGATATTTTTT+AGG | + | chr4.2:13569586-13569605 | MS.gene08841:intron | 15.0% |
| !!! | ATTTATTTATTTCTCTTTCT+TGG | + | chr4.2:13569131-13569150 | MS.gene08841:intron | 15.0% |
| !!! | GTTTAAAATTTAATGACTTT+AGG | + | chr4.2:13570130-13570149 | MS.gene08841:intron | 15.0% |
| !!! | TTTAATTTAACATTGTTGTT+GGG | + | chr4.2:13569493-13569512 | MS.gene08841:intron | 15.0% |
| !! | ATAAAAAAAGACATTGTACT+TGG | - | chr4.2:13569797-13569816 | None:intergenic | 20.0% |
| !! | ATGAAAAAGAAAAGAAGAAA+AGG | - | chr4.2:13569105-13569124 | None:intergenic | 20.0% |
| !! | CCAAAAATAGAAGAAAATAA+TGG | + | chr4.2:13573290-13573309 | MS.gene08841:CDS | 20.0% |
| !! | CTTAAATAACACTCATAAAA+AGG | - | chr4.2:13570078-13570097 | None:intergenic | 20.0% |
| !! | GCTGGATTAATTATAAATTT+AGG | + | chr4.2:13570039-13570058 | MS.gene08841:intron | 20.0% |
| !! | TCGTAGATTGTAATATAAAT+TGG | - | chr4.2:13570755-13570774 | None:intergenic | 20.0% |
| !! | TGAAAAAGAAAAGAAGAAAA+GGG | - | chr4.2:13569104-13569123 | None:intergenic | 20.0% |
| !! | TTATGATTAACTTAGTCAAT+AGG | + | chr4.2:13569923-13569942 | MS.gene08841:intron | 20.0% |
| !!! | AAATCATTTTTCATGAAAAG+TGG | - | chr4.2:13570259-13570278 | None:intergenic | 20.0% |
| !!! | AATCATTTTTCATGAAAAGT+GGG | - | chr4.2:13570258-13570277 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCTGGCAATAAAT+TGG | - | chr4.2:13571188-13571207 | None:intergenic | 20.0% |
| !!! | CCATTATTTTCTTCTATTTT+TGG | - | chr4.2:13573293-13573312 | None:intergenic | 20.0% |
| !!! | GTTTAATTTAACATTGTTGT+TGG | + | chr4.2:13569492-13569511 | MS.gene08841:intron | 20.0% |
| !!! | TAACTTGATTTGAAAATCAA+CGG | + | chr4.2:13570421-13570440 | MS.gene08841:intron | 20.0% |
| !!! | TTTAACTTTCCAAAATATGA+TGG | + | chr4.2:13569555-13569574 | MS.gene08841:intron | 20.0% |
| !!! | TTTGTTCTTTTCATGTTAAA+GGG | + | chr4.2:13569224-13569243 | MS.gene08841:intron | 20.0% |
| !!! | TTTTTTTCTGGCAATAAATT+GGG | - | chr4.2:13571187-13571206 | None:intergenic | 20.0% |
| ! | AAATGCATATTCAATGTTTG+TGG | - | chr4.2:13570831-13570850 | None:intergenic | 25.0% |
| ! | ATAGAAGAAAATAATGGTTC+TGG | + | chr4.2:13573296-13573315 | MS.gene08841:CDS | 25.0% |
| ! | ATTTAATGACTTTAGGCTTA+AGG | + | chr4.2:13570137-13570156 | MS.gene08841:intron | 25.0% |
| ! | CAAGTTTAACCAAGTTATTA+CGG | - | chr4.2:13572446-13572465 | None:intergenic | 25.0% |
| ! | CCAGAAAAAAATATTTATGC+TGG | + | chr4.2:13571196-13571215 | MS.gene08841:CDS | 25.0% |
| ! | GAAAAAAATTTGGATTGAGA+CGG | - | chr4.2:13570876-13570895 | None:intergenic | 25.0% |
| ! | GAAAAAGAAAAGAAGAAAAG+GGG | - | chr4.2:13569103-13569122 | None:intergenic | 25.0% |
| ! | TATCAAATATCGCATGAAAT+CGG | + | chr4.2:13571841-13571860 | MS.gene08841:CDS | 25.0% |
| ! | TCACATTCTTCTATAAATTC+CGG | + | chr4.2:13572561-13572580 | MS.gene08841:CDS | 25.0% |
| ! | TTATCGAATTGAAGTTATAG+CGG | - | chr4.2:13570657-13570676 | None:intergenic | 25.0% |
| ! | TTGAAATCGTACAAAAATCA+GGG | - | chr4.2:13570680-13570699 | None:intergenic | 25.0% |
| ! | TTTAATGACTTTAGGCTTAA+GGG | + | chr4.2:13570138-13570157 | MS.gene08841:intron | 25.0% |
| !! | AACAAATTCAAAAGCTTTAG+AGG | - | chr4.2:13570101-13570120 | None:intergenic | 25.0% |
| !! | ATGACTTTACTTTATTTAGC+CGG | + | chr4.2:13569827-13569846 | MS.gene08841:intron | 25.0% |
| !! | CTTTCACTTTGCATAATTTT+TGG | - | chr4.2:13570995-13571014 | None:intergenic | 25.0% |
| !! | CTTTGTTCTTTTCATGTTAA+AGG | + | chr4.2:13569223-13569242 | MS.gene08841:intron | 25.0% |
| !! | TGATAACCTGATTTAAAGTT+GGG | - | chr4.2:13573142-13573161 | None:intergenic | 25.0% |
| !! | TTGATAACCTGATTTAAAGT+TGG | - | chr4.2:13573143-13573162 | None:intergenic | 25.0% |
| !! | TTTAGCAAACCATCATATTT+TGG | - | chr4.2:13569567-13569586 | None:intergenic | 25.0% |
| !!! | AGCTGAAATTTTGGAATTTT+CGG | - | chr4.2:13570537-13570556 | None:intergenic | 25.0% |
| !!! | CCAGCATAAATATTTTTTTC+TGG | - | chr4.2:13571199-13571218 | None:intergenic | 25.0% |
| !!! | GTGTTGATATTTTTTAGGTT+TGG | + | chr4.2:13569591-13569610 | MS.gene08841:intron | 25.0% |
| !!! | TCTTCTATTTTTGGTGATTT+CGG | - | chr4.2:13573284-13573303 | None:intergenic | 25.0% |
| AAATGTGACAGATTGTAGTT+TGG | + | chr4.2:13571222-13571241 | MS.gene08841:CDS | 30.0% | |
| ACAACTGTTAACTCAATTCT+TGG | + | chr4.2:13573323-13573342 | MS.gene08841:CDS | 30.0% | |
| ACATTCTTCTATAAATTCCG+GGG | + | chr4.2:13572563-13572582 | MS.gene08841:CDS | 30.0% | |
| AGCAATCAAGTGAGTTATTT+AGG | + | chr4.2:13572160-13572179 | MS.gene08841:CDS | 30.0% | |
| AGGTAAAATCAGAAAAAGAC+AGG | + | chr4.2:13571284-13571303 | MS.gene08841:CDS | 30.0% | |
| ATAAAGAAAGGCAACAATGA+CGG | - | chr4.2:13572787-13572806 | None:intergenic | 30.0% | |
| ATCATCTGAACCATTGAAAT+TGG | - | chr4.2:13569430-13569449 | None:intergenic | 30.0% | |
| ATTGCCTGTTAAAATATGGT+TGG | + | chr4.2:13570204-13570223 | MS.gene08841:intron | 30.0% | |
| ATTGTAACTGTAAACTTACC+TGG | - | chr4.2:13569465-13569484 | None:intergenic | 30.0% | |
| ATTTAGTAGATCAGAAAGTG+AGG | + | chr4.2:13569663-13569682 | MS.gene08841:CDS | 30.0% | |
| CAAGAACATAATTTGAACTC+AGG | + | chr4.2:13569754-13569773 | MS.gene08841:CDS | 30.0% | |
| CACATTCTTCTATAAATTCC+GGG | + | chr4.2:13572562-13572581 | MS.gene08841:CDS | 30.0% | |
| CCAAGAAATGTTAGAACTAA+TGG | + | chr4.2:13570293-13570312 | MS.gene08841:intron | 30.0% | |
| CGTAATAACTTGGTTAAACT+TGG | + | chr4.2:13572444-13572463 | MS.gene08841:CDS | 30.0% | |
| GAACTTTCATGAATTTCATC+AGG | - | chr4.2:13571919-13571938 | None:intergenic | 30.0% | |
| GAAGAACAAACCAATTTCAA+TGG | + | chr4.2:13569417-13569436 | MS.gene08841:CDS | 30.0% | |
| GGTAAAATCAGAAAAAGACA+GGG | + | chr4.2:13571285-13571304 | MS.gene08841:CDS | 30.0% | |
| GTTGAAATCGTACAAAAATC+AGG | - | chr4.2:13570681-13570700 | None:intergenic | 30.0% | |
| TATCCAAACATAGCATTACT+TGG | + | chr4.2:13569971-13569990 | MS.gene08841:intron | 30.0% | |
| TCAACCTGAAAGTAGTTTAA+TGG | + | chr4.2:13571939-13571958 | MS.gene08841:CDS | 30.0% | |
| TCATCGAGATAACTGTTTAA+AGG | - | chr4.2:13572860-13572879 | None:intergenic | 30.0% | |
| TCCAATTGAATCATCTTCAA+CGG | - | chr4.2:13572403-13572422 | None:intergenic | 30.0% | |
| TGCTTTGTGCAAATAAAGAA+AGG | - | chr4.2:13572799-13572818 | None:intergenic | 30.0% | |
| TTATTGCTTTGATCATCAAC+CGG | - | chr4.2:13572660-13572679 | None:intergenic | 30.0% | |
| TTCATGTTAAAGGGTCAAAA+GGG | + | chr4.2:13569233-13569252 | MS.gene08841:intron | 30.0% | |
| TTCCATTGCCTGTTAAAATA+TGG | + | chr4.2:13570200-13570219 | MS.gene08841:intron | 30.0% | |
| TTCTTCTTTGTAACCTTCAA+TGG | - | chr4.2:13569403-13569422 | None:intergenic | 30.0% | |
| TTCTTGAGGAAATTCATACT+GGG | - | chr4.2:13571467-13571486 | None:intergenic | 30.0% | |
| TTGTACTTGGAAGACATTAA+AGG | - | chr4.2:13569784-13569803 | None:intergenic | 30.0% | |
| TTTCATGTTAAAGGGTCAAA+AGG | + | chr4.2:13569232-13569251 | MS.gene08841:intron | 30.0% | |
| ! | AATAATTTTCCTGAAGAGCA+TGG | + | chr4.2:13571892-13571911 | MS.gene08841:CDS | 30.0% |
| ! | CATTGTTGTTGGGAAATAAT+AGG | + | chr4.2:13569503-13569522 | MS.gene08841:intron | 30.0% |
| ! | GAAAAGGAGCTTAATTTGAA+AGG | + | chr4.2:13571253-13571272 | MS.gene08841:CDS | 30.0% |
| ! | TATTAAGGCAGCTGAAATTT+TGG | - | chr4.2:13570546-13570565 | None:intergenic | 30.0% |
| ! | TCTTGGTTTACATGCTTTTA+CGG | + | chr4.2:13569148-13569167 | MS.gene08841:intron | 30.0% |
| !! | CCATTAGTTCTAACATTTCT+TGG | - | chr4.2:13570296-13570315 | None:intergenic | 30.0% |
| !! | TTTGGATTTTGACGAAATTG+TGG | + | chr4.2:13569852-13569871 | MS.gene08841:intron | 30.0% |
| !!! | AACCATATTTTAACAGGCAA+TGG | - | chr4.2:13570205-13570224 | None:intergenic | 30.0% |
| !!! | AGTTTTGAAGTGGGAAATAT+AGG | + | chr4.2:13571013-13571032 | MS.gene08841:CDS | 30.0% |
| !!! | CAAAGTGAAAGTTTTGAAGT+GGG | + | chr4.2:13571004-13571023 | MS.gene08841:CDS | 30.0% |
| !!! | CTTTTTTTCCCTCTTGATAT+TGG | - | chr4.2:13573426-13573445 | None:intergenic | 30.0% |
| !!! | TTTTTAGGTTTGGTTGAGTT+GGG | + | chr4.2:13569601-13569620 | MS.gene08841:intron | 30.0% |
| !!! | TTTTTTAGGTTTGGTTGAGT+TGG | + | chr4.2:13569600-13569619 | MS.gene08841:intron | 30.0% |
| AAAAGACAGGGTTGAAATCA+TGG | + | chr4.2:13571297-13571316 | MS.gene08841:CDS | 35.0% | |
| AACAATGACAAGGGTAATGA+TGG | + | chr4.2:13569628-13569647 | MS.gene08841:CDS | 35.0% | |
| AAGAAAAGGCTGCAAATGAA+TGG | + | chr4.2:13573378-13573397 | MS.gene08841:CDS | 35.0% | |
| AATTGAATCATCTTCAACGG+CGG | - | chr4.2:13572400-13572419 | None:intergenic | 35.0% | |
| ACAAAAATACATGCACTTGC+AGG | - | chr4.2:13570476-13570495 | None:intergenic | 35.0% | |
| AGAATGTGATGTATACTTGC+TGG | - | chr4.2:13572550-13572569 | None:intergenic | 35.0% | |
| AGATCAAAGCCGTAATAACT+TGG | + | chr4.2:13572434-13572453 | MS.gene08841:CDS | 35.0% | |
| ATAAACGATGCATCTGTAGT+TGG | + | chr4.2:13572048-13572067 | MS.gene08841:CDS | 35.0% | |
| ATATCCTGCCAATATCAAGA+GGG | + | chr4.2:13573415-13573434 | MS.gene08841:CDS | 35.0% | |
| CAAACCAACTGTATCCAAAA+TGG | - | chr4.2:13573464-13573483 | None:intergenic | 35.0% | |
| CTCAGCAAATGAATTTCAGA+GGG | + | chr4.2:13571963-13571982 | MS.gene08841:CDS | 35.0% | |
| CTTCTTGAGGAAATTCATAC+TGG | - | chr4.2:13571468-13571487 | None:intergenic | 35.0% | |
| GAAATGTTAGAACTAATGGC+TGG | + | chr4.2:13570297-13570316 | MS.gene08841:intron | 35.0% | |
| GAAATTGTGGTTACACTATG+CGG | + | chr4.2:13569865-13569884 | MS.gene08841:intron | 35.0% | |
| GAAGAAAAGGGGAAAGAAAA+AGG | - | chr4.2:13569092-13569111 | None:intergenic | 35.0% | |
| GAGACCATTAAACTACTTTC+AGG | - | chr4.2:13571946-13571965 | None:intergenic | 35.0% | |
| GATGATGATTACAAAACACC+AGG | + | chr4.2:13569444-13569463 | MS.gene08841:CDS | 35.0% | |
| GCCTTAATACGCTATTAAAG+CGG | + | chr4.2:13570557-13570576 | MS.gene08841:intron | 35.0% | |
| GTTGTAGGTGAAACATATGA+AGG | + | chr4.2:13571334-13571353 | MS.gene08841:CDS | 35.0% | |
| GTTTATGTGTGTCACAAATG+TGG | + | chr4.2:13569312-13569331 | MS.gene08841:CDS | 35.0% | |
| TAATTTGAAAGGAAGCGATG+AGG | + | chr4.2:13571264-13571283 | MS.gene08841:CDS | 35.0% | |
| TACTACTTGTAATGAAGTCG+AGG | + | chr4.2:13571546-13571565 | MS.gene08841:CDS | 35.0% | |
| TCAAGTTTATTGTCATGCAC+AGG | - | chr4.2:13571616-13571635 | None:intergenic | 35.0% | |
| TCCGCTTTAATAGCGTATTA+AGG | - | chr4.2:13570561-13570580 | None:intergenic | 35.0% | |
| TCTCAGCAAATGAATTTCAG+AGG | + | chr4.2:13571962-13571981 | MS.gene08841:CDS | 35.0% | |
| TCTGCTGTTGAAGATAATTC+AGG | + | chr4.2:13572603-13572622 | MS.gene08841:CDS | 35.0% | |
| TCTTGAGGAAATTCATACTG+GGG | - | chr4.2:13571466-13571485 | None:intergenic | 35.0% | |
| TGACCAAGTAATGCTATGTT+TGG | - | chr4.2:13569977-13569996 | None:intergenic | 35.0% | |
| TGTTAATCCGAAGGAAAAGA+AGG | + | chr4.2:13571417-13571436 | MS.gene08841:CDS | 35.0% | |
| TTGAAGTGGGAAATATAGGT+GGG | + | chr4.2:13571017-13571036 | MS.gene08841:CDS | 35.0% | |
| TTGACTAAATTAACTCCACC+TGG | + | chr4.2:13572684-13572703 | MS.gene08841:CDS | 35.0% | |
| TTGGGTTCAAACAATGACAA+GGG | + | chr4.2:13569619-13569638 | MS.gene08841:CDS | 35.0% | |
| TTGGTCATAACTCATACGTA+TGG | + | chr4.2:13569990-13570009 | MS.gene08841:intron | 35.0% | |
| TTGGTTAAACTTGGTTCATC+TGG | + | chr4.2:13572453-13572472 | MS.gene08841:CDS | 35.0% | |
| TTGGTTCCCAACTTTAAATC+AGG | + | chr4.2:13573133-13573152 | MS.gene08841:CDS | 35.0% | |
| TTTCGTCAAAATCCAAACAC+CGG | - | chr4.2:13569849-13569868 | None:intergenic | 35.0% | |
| ! | AATTGAAGAGCAGACCATTT+TGG | + | chr4.2:13573447-13573466 | MS.gene08841:CDS | 35.0% |
| ! | AGGAATAATAGTGATGATGC+TGG | + | chr4.2:13572180-13572199 | MS.gene08841:CDS | 35.0% |
| ! | AGGGTAATGATGGAATTGAA+AGG | + | chr4.2:13569638-13569657 | MS.gene08841:CDS | 35.0% |
| ! | CATTTTTCATGAAAAGTGGG+AGG | - | chr4.2:13570255-13570274 | None:intergenic | 35.0% |
| ! | TACTTTATTTAGCCGGTGTT+TGG | + | chr4.2:13569834-13569853 | MS.gene08841:intron | 35.0% |
| ! | TTTGAAGTGGGAAATATAGG+TGG | + | chr4.2:13571016-13571035 | MS.gene08841:CDS | 35.0% |
| !! | AGATTGCTCTGAAGTTTCTT+TGG | + | chr4.2:13571798-13571817 | MS.gene08841:CDS | 35.0% |
| !! | ATTTGACTGTTGTGGTTTTG+CGG | - | chr4.2:13573096-13573115 | None:intergenic | 35.0% |
| !! | GCAAGTGCATGTATTTTTGT+CGG | + | chr4.2:13570476-13570495 | MS.gene08841:intron | 35.0% |
| !! | TAGTTTGGTGTGTGATGAAA+AGG | + | chr4.2:13571237-13571256 | MS.gene08841:CDS | 35.0% |
| !! | TCTGCAATTGAGCTTGTTAA+TGG | - | chr4.2:13571076-13571095 | None:intergenic | 35.0% |
| !! | TTTTAAGGGAACGAGAATCA+TGG | + | chr4.2:13569288-13569307 | MS.gene08841:intron | 35.0% |
| !!! | AGATGCTGTTGATGATTTTC+CGG | + | chr4.2:13569693-13569712 | MS.gene08841:CDS | 35.0% |
| !!! | GCAAAGTGAAAGTTTTGAAG+TGG | + | chr4.2:13571003-13571022 | MS.gene08841:CDS | 35.0% |
| !!! | GGATTTTGAGGTTTCCAATA+TGG | - | chr4.2:13570611-13570630 | None:intergenic | 35.0% |
| !!! | TGTGAGTTTTGGTTTGATCT+TGG | - | chr4.2:13569057-13569076 | None:intergenic | 35.0% |
| !!! | TTGATTTGGCTTTTCTCAAG+TGG | + | chr4.2:13570365-13570384 | MS.gene08841:intron | 35.0% |
| AAACTTGATGCAGCTTATCC+TGG | + | chr4.2:13571628-13571647 | MS.gene08841:CDS | 40.0% | |
| AACCAGTTGAGTGAAAGAAG+TGG | + | chr4.2:13571712-13571731 | MS.gene08841:CDS | 40.0% | |
| AACTCATACGTATGGACTTG+TGG | + | chr4.2:13569998-13570017 | MS.gene08841:intron | 40.0% | |
| AACTTGATGCAGCTTATCCT+GGG | + | chr4.2:13571629-13571648 | MS.gene08841:CDS | 40.0% | |
| AAGATCTGTGGAACCATTGA+AGG | + | chr4.2:13569387-13569406 | MS.gene08841:CDS | 40.0% | |
| AATTTCCCTGGATCATGACA+TGG | + | chr4.2:13571384-13571403 | MS.gene08841:CDS | 40.0% | |
| ACATGAGGAACATGTTACTG+AGG | + | chr4.2:13571666-13571685 | MS.gene08841:CDS | 40.0% | |
| ACTACGCACTTTATACCCTA+AGG | - | chr4.2:13570399-13570418 | None:intergenic | 40.0% | |
| AGCAAATGAATTTCAGAGGG+AGG | + | chr4.2:13571966-13571985 | MS.gene08841:CDS | 40.0% | |
| AGTTAACGAAGCAATTTCCC+TGG | + | chr4.2:13571372-13571391 | MS.gene08841:CDS | 40.0% | |
| AGTTTCCACATCAGTAACAG+CGG | - | chr4.2:13572895-13572914 | None:intergenic | 40.0% | |
| ATATTGGCAGGATATCTTGC+TGG | - | chr4.2:13573410-13573429 | None:intergenic | 40.0% | |
| ATGTGTGTCACAAATGTGGT+TGG | + | chr4.2:13569316-13569335 | MS.gene08841:CDS | 40.0% | |
| ATTGGCGAGTTTACTTCTTG+AGG | - | chr4.2:13571481-13571500 | None:intergenic | 40.0% | |
| ATTTCCCTGGATCATGACAT+GGG | + | chr4.2:13571385-13571404 | MS.gene08841:CDS | 40.0% | |
| CAAGTGGAAAATGCACCTTA+GGG | + | chr4.2:13570381-13570400 | MS.gene08841:intron | 40.0% | |
| CTCTTCAGAGATGCATGTTA+TGG | + | chr4.2:13571741-13571760 | MS.gene08841:CDS | 40.0% | |
| GAAGAGAATAAGAAACCGAC+TGG | + | chr4.2:13572252-13572271 | MS.gene08841:CDS | 40.0% | |
| GACTCAAGTGGTGAAAGAAA+AGG | + | chr4.2:13573364-13573383 | MS.gene08841:CDS | 40.0% | |
| GAGGTTTCCAATATGGTGAA+TGG | - | chr4.2:13570604-13570623 | None:intergenic | 40.0% | |
| GATATCCTGCCAATATCAAG+AGG | + | chr4.2:13573414-13573433 | MS.gene08841:CDS | 40.0% | |
| GCCGTTGAAGATGATTCAAT+TGG | + | chr4.2:13572399-13572418 | MS.gene08841:CDS | 40.0% | |
| GCCTGTTAAAATATGGTTGG+TGG | + | chr4.2:13570207-13570226 | MS.gene08841:intron | 40.0% | |
| GTGGAAACTTTACCATCAAC+CGG | + | chr4.2:13572906-13572925 | MS.gene08841:CDS | 40.0% | |
| GTTGGGTTCAAACAATGACA+AGG | + | chr4.2:13569618-13569637 | MS.gene08841:CDS | 40.0% | |
| GTTTCCAATATGGTGAATGG+CGG | - | chr4.2:13570601-13570620 | None:intergenic | 40.0% | |
| TCAACTGAAACATCAGTTCC+AGG | - | chr4.2:13572705-13572724 | None:intergenic | 40.0% | |
| TCAAGTGGAAAATGCACCTT+AGG | + | chr4.2:13570380-13570399 | MS.gene08841:intron | 40.0% | |
| TGAGAAAACCCAGAAAGACA+AGG | - | chr4.2:13569179-13569198 | None:intergenic | 40.0% | |
| TTAGGCTTAAGGGAGAAGTT+TGG | + | chr4.2:13570148-13570167 | MS.gene08841:intron | 40.0% | |
| TTATTGTCATGCACAGGAAG+TGG | - | chr4.2:13571610-13571629 | None:intergenic | 40.0% | |
| TTCTGGCAATAAATTGGGCA+TGG | - | chr4.2:13571182-13571201 | None:intergenic | 40.0% | |
| TTGCTTGAGCTAGCAATAAG+TGG | - | chr4.2:13570953-13570972 | None:intergenic | 40.0% | |
| TTTCATGAAAAGTGGGAGGT+GGG | - | chr4.2:13570251-13570270 | None:intergenic | 40.0% | |
| ! | ACACCTCTCAAGAGTCTTTT+GGG | + | chr4.2:13573236-13573255 | MS.gene08841:CDS | 40.0% |
| ! | ACATTCACGTCTTCCTTTTG+TGG | - | chr4.2:13571577-13571596 | None:intergenic | 40.0% |
| ! | ACTGATGTTTCAGTTGACTC+TGG | + | chr4.2:13572708-13572727 | MS.gene08841:CDS | 40.0% |
| ! | AGTGATGATGCTGGTGAAAA+TGG | + | chr4.2:13572189-13572208 | MS.gene08841:CDS | 40.0% |
| ! | CAGACCATTTTGGATACAGT+TGG | + | chr4.2:13573457-13573476 | MS.gene08841:CDS | 40.0% |
| ! | CTCAAAATCCGATACCGATT+TGG | + | chr4.2:13570621-13570640 | MS.gene08841:intron | 40.0% |
| ! | GAGTCAACTGATAACGTTGT+AGG | + | chr4.2:13571319-13571338 | MS.gene08841:CDS | 40.0% |
| ! | TTACGGCTTTGATCTTGAAC+AGG | - | chr4.2:13572429-13572448 | None:intergenic | 40.0% |
| ! | TTTTCATGAAAAGTGGGAGG+TGG | - | chr4.2:13570252-13570271 | None:intergenic | 40.0% |
| ! | TTTTCCCTCTTGATATTGGC+AGG | - | chr4.2:13573422-13573441 | None:intergenic | 40.0% |
| !! | CAAATCGGTATCGGATTTTG+AGG | - | chr4.2:13570623-13570642 | None:intergenic | 40.0% |
| !! | CACAGTAGAGAATTTGTTGC+TGG | + | chr4.2:13570021-13570040 | MS.gene08841:intron | 40.0% |
| !! | GGAAAGAAAAAGGAAGTACC+TGG | - | chr4.2:13569082-13569101 | None:intergenic | 40.0% |
| !! | TCTGCTCTGGTTTGTTATCT+TGG | - | chr4.2:13573204-13573223 | None:intergenic | 40.0% |
| !! | TTTGTCGGTGTTATCTACAG+CGG | + | chr4.2:13570491-13570510 | MS.gene08841:intron | 40.0% |
| !!! | GCCACCAACCATATTTTAAC+AGG | - | chr4.2:13570211-13570230 | None:intergenic | 40.0% |
| !!! | GTTGATGATTTTCCGGATAG+TGG | + | chr4.2:13569700-13569719 | MS.gene08841:CDS | 40.0% |
| AAGTGAGAGATGCACTTCAG+AGG | - | chr4.2:13570718-13570737 | None:intergenic | 45.0% | |
| AATAATCACGAACGAGGCTC+AGG | + | chr4.2:13571498-13571517 | MS.gene08841:CDS | 45.0% | |
| ACGGAAAGTCCTTGTCTTTC+TGG | + | chr4.2:13569167-13569186 | MS.gene08841:intron | 45.0% | |
| ACTGAAACATCAGTTCCAGG+TGG | - | chr4.2:13572702-13572721 | None:intergenic | 45.0% | |
| AGCACGTCTATGTTTAGCAC+TGG | - | chr4.2:13569361-13569380 | None:intergenic | 45.0% | |
| AGTGAGAGATGCACTTCAGA+GGG | - | chr4.2:13570717-13570736 | None:intergenic | 45.0% | |
| ATACTGGGGCAGCAAAGAAA+GGG | - | chr4.2:13571452-13571471 | None:intergenic | 45.0% | |
| ATCAGTAACAGCGGGTACAT+CGG | - | chr4.2:13572886-13572905 | None:intergenic | 45.0% | |
| CAAACCAAAACTCACACTCC+AGG | + | chr4.2:13569061-13569080 | MS.gene08841:CDS | 45.0% | |
| CACCACTTCTTTCACTCAAC+TGG | - | chr4.2:13571717-13571736 | None:intergenic | 45.0% | |
| CCTTGACTTAGTCCACTATC+CGG | - | chr4.2:13569715-13569734 | None:intergenic | 45.0% | |
| CGAAGGAAAAGAAGGAACCT+GGG | + | chr4.2:13571425-13571444 | MS.gene08841:CDS | 45.0% | |
| CGATGCATCTGTAGTTGGAA+AGG | + | chr4.2:13572053-13572072 | MS.gene08841:CDS | 45.0% | |
| CGGAAAGTCCTTGTCTTTCT+GGG | + | chr4.2:13569168-13569187 | MS.gene08841:intron | 45.0% | |
| CTATTAAAGCGGAGTGTGGT+GGG | + | chr4.2:13570568-13570587 | MS.gene08841:intron | 45.0% | |
| CTGGGATGTGGATTTGGAAA+AGG | - | chr4.2:13569342-13569361 | None:intergenic | 45.0% | |
| CTTTGATCATCAACCGGCAT+TGG | - | chr4.2:13572654-13572673 | None:intergenic | 45.0% | |
| GAGGTGGAATTTGACTGTTG+TGG | - | chr4.2:13573104-13573123 | None:intergenic | 45.0% | |
| GCACGTCTATGTTTAGCACT+GGG | - | chr4.2:13569360-13569379 | None:intergenic | 45.0% | |
| GCTCAACTTCTGATTGCAAG+TGG | - | chr4.2:13572143-13572162 | None:intergenic | 45.0% | |
| GGATGAACAGCTATCAGTGA+AGG | + | chr4.2:13572302-13572321 | MS.gene08841:CDS | 45.0% | |
| GGATGCACAACTGTTAGTGA+AGG | + | chr4.2:13572509-13572528 | MS.gene08841:CDS | 45.0% | |
| GTTTCCACATCAGTAACAGC+GGG | - | chr4.2:13572894-13572913 | None:intergenic | 45.0% | |
| TACGCTATTAAAGCGGAGTG+TGG | + | chr4.2:13570564-13570583 | MS.gene08841:intron | 45.0% | |
| TCACCCAAAAGACTCTTGAG+AGG | - | chr4.2:13573242-13573261 | None:intergenic | 45.0% | |
| TCTGTAGTTGGAAAGGTTGC+AGG | + | chr4.2:13572060-13572079 | MS.gene08841:CDS | 45.0% | |
| TGACAGTTTGGAAGGCAACT+GGG | + | chr4.2:13572740-13572759 | MS.gene08841:CDS | 45.0% | |
| TGAGCCTCGTTCGTGATTAT+TGG | - | chr4.2:13571499-13571518 | None:intergenic | 45.0% | |
| TGTGCTCTTTACTTCTGCTC+TGG | - | chr4.2:13573217-13573236 | None:intergenic | 45.0% | |
| ! | AGTACCTGGAGTGTGAGTTT+TGG | - | chr4.2:13569068-13569087 | None:intergenic | 45.0% |
| ! | AGTCGAGGTTTTGCCACAAA+AGG | + | chr4.2:13571561-13571580 | MS.gene08841:CDS | 45.0% |
| ! | CACACCTCTCAAGAGTCTTT+TGG | + | chr4.2:13573235-13573254 | MS.gene08841:CDS | 45.0% |
| ! | CCAGGTTCCTTCTTTTCCTT+CGG | - | chr4.2:13571427-13571446 | None:intergenic | 45.0% |
| ! | CTATGTTTAGCACTGGGATG+TGG | - | chr4.2:13569354-13569373 | None:intergenic | 45.0% |
| ! | GAAGAATCGAGCATTGTGCA+TGG | + | chr4.2:13571106-13571125 | MS.gene08841:CDS | 45.0% |
| ! | GAGCGTGTCATTGAAACATG+AGG | + | chr4.2:13571651-13571670 | MS.gene08841:CDS | 45.0% |
| ! | GTGATGTATACTTGCTGGCA+AGG | - | chr4.2:13572545-13572564 | None:intergenic | 45.0% |
| ! | TTAGCACTGGGATGTGGATT+TGG | - | chr4.2:13569348-13569367 | None:intergenic | 45.0% |
| ! | TTTCAGTTGACTCTGGTAGC+CGG | + | chr4.2:13572715-13572734 | MS.gene08841:CDS | 45.0% |
| !! | GTTGGTTTGTTGCACAACAG+TGG | + | chr4.2:13573475-13573494 | MS.gene08841:CDS | 45.0% |
| !! | TCTCAAGAGTCTTTTGGGTG+AGG | + | chr4.2:13573241-13573260 | MS.gene08841:CDS | 45.0% |
| !! | TGGTTTTGCGGTTTCAGAAG+TGG | - | chr4.2:13573084-13573103 | None:intergenic | 45.0% |
| AAAGGTTGCAGGAGCAGATG+TGG | + | chr4.2:13572071-13572090 | MS.gene08841:CDS | 50.0% | |
| AAAGTTGGGAACCAACCAGC+AGG | - | chr4.2:13573128-13573147 | None:intergenic | 50.0% | |
| AATGGATCCACAGTAGAGCC+TGG | - | chr4.2:13571058-13571077 | None:intergenic | 50.0% | |
| AGTTACTGCTGTGCCAATGC+CGG | + | chr4.2:13572638-13572657 | MS.gene08841:CDS | 50.0% | |
| ATCGCCCATGTCATGATCCA+GGG | - | chr4.2:13571392-13571411 | None:intergenic | 50.0% | |
| CATACTGGGGCAGCAAAGAA+AGG | - | chr4.2:13571453-13571472 | None:intergenic | 50.0% | |
| CCGAAGGAAAAGAAGGAACC+TGG | + | chr4.2:13571424-13571443 | MS.gene08841:CDS | 50.0% | |
| CGATGGAGCTGTTAATCCGA+AGG | + | chr4.2:13571408-13571427 | MS.gene08841:CDS | 50.0% | |
| CGTGCTCACAAGAAGATCTG+TGG | + | chr4.2:13569375-13569394 | MS.gene08841:CDS | 50.0% | |
| CTCGCCAATAATCACGAACG+AGG | + | chr4.2:13571492-13571511 | MS.gene08841:CDS | 50.0% | |
| CTGACCGCCATTCACCATAT+TGG | + | chr4.2:13570594-13570613 | MS.gene08841:intron | 50.0% | |
| GACAGTTTGGAAGGCAACTG+GGG | + | chr4.2:13572741-13572760 | MS.gene08841:CDS | 50.0% | |
| GAGTCAGCAGCAATACCAGT+CGG | - | chr4.2:13572270-13572289 | None:intergenic | 50.0% | |
| GATTGCAAGTGGTCACTACG+AGG | - | chr4.2:13572132-13572151 | None:intergenic | 50.0% | |
| GCTATTAAAGCGGAGTGTGG+TGG | + | chr4.2:13570567-13570586 | MS.gene08841:intron | 50.0% | |
| GTGACAGTTTGGAAGGCAAC+TGG | + | chr4.2:13572739-13572758 | MS.gene08841:CDS | 50.0% | |
| GTGTTATCTACAGCGGATGG+CGG | + | chr4.2:13570498-13570517 | MS.gene08841:intron | 50.0% | |
| GTTTCAGAAGTGGCGCCTTT+AGG | - | chr4.2:13573074-13573093 | None:intergenic | 50.0% | |
| TCAAATTCCACCTCACCTGC+TGG | + | chr4.2:13573110-13573129 | MS.gene08841:CDS | 50.0% | |
| TCAATTGCCAGGCTCTACTG+TGG | + | chr4.2:13571048-13571067 | MS.gene08841:CDS | 50.0% | |
| TCACCACTTGAGTCGCTGAA+GGG | - | chr4.2:13573358-13573377 | None:intergenic | 50.0% | |
| TCATCAGGTCCATGCTCTTC+AGG | - | chr4.2:13571904-13571923 | None:intergenic | 50.0% | |
| TGCCTTCCAAACTGTCACAC+CGG | - | chr4.2:13572737-13572756 | None:intergenic | 50.0% | |
| TGCTGAGCTTTCTGCTGAAC+TGG | + | chr4.2:13572371-13572390 | MS.gene08841:CDS | 50.0% | |
| TGTACCCGCTGTTACTGATG+TGG | + | chr4.2:13572887-13572906 | MS.gene08841:CDS | 50.0% | |
| TGTTTCAATGACACGCTCCC+AGG | - | chr4.2:13571649-13571668 | None:intergenic | 50.0% | |
| TTCACCACTTGAGTCGCTGA+AGG | - | chr4.2:13573359-13573378 | None:intergenic | 50.0% | |
| TTCATCAGTCGCAGACCGAA+AGG | - | chr4.2:13571995-13572014 | None:intergenic | 50.0% | |
| TTGAAGTTATAGCGGCGCCA+TGG | - | chr4.2:13570649-13570668 | None:intergenic | 50.0% | |
| ! | GTGCATGGCGATGGTTTTTC+TGG | + | chr4.2:13571121-13571140 | MS.gene08841:CDS | 50.0% |
| !! | CCGGATAGTGGACTAAGTCA+AGG | + | chr4.2:13569712-13569731 | MS.gene08841:CDS | 50.0% |
| !! | CTGCTGACTCACATGAAGCA+CGG | + | chr4.2:13572487-13572506 | MS.gene08841:CDS | 50.0% |
| !! | GGTGATTTCGGCTTGTTGCT+AGG | - | chr4.2:13573272-13573291 | None:intergenic | 50.0% |
| !! | TCGGTGTTATCTACAGCGGA+TGG | + | chr4.2:13570495-13570514 | MS.gene08841:intron | 50.0% |
| !! | TGCTGACTCACATGAAGCAC+GGG | + | chr4.2:13572488-13572507 | MS.gene08841:CDS | 50.0% |
| !! | TTCAGAGGGAGGCATCCTTT+CGG | + | chr4.2:13571977-13571996 | MS.gene08841:CDS | 50.0% |
| !! | TTTACCATCAACCGGTTCGC+TGG | + | chr4.2:13572914-13572933 | MS.gene08841:CDS | 50.0% |
| AGCCGGTGTGACAGTTTGGA+AGG | + | chr4.2:13572732-13572751 | MS.gene08841:CDS | 55.0% | |
| AGTGGATCCTCAGCGAAGGT+AGG | + | chr4.2:13573493-13573512 | MS.gene08841:CDS | 55.0% | |
| ATCATGTCGAGCAGAAGCCC+CGG | - | chr4.2:13572583-13572602 | None:intergenic | 55.0% | |
| ATTCCACCTCACCTGCTGGT+TGG | + | chr4.2:13573114-13573133 | MS.gene08841:CDS | 55.0% | |
| CAACAGTGGATCCTCAGCGA+AGG | + | chr4.2:13573489-13573508 | MS.gene08841:CDS | 55.0% | |
| CACCACTTGAGTCGCTGAAG+GGG | - | chr4.2:13573357-13573376 | None:intergenic | 55.0% | |
| CACTTGCAGGCGTGCAACTA+TGG | - | chr4.2:13570463-13570482 | None:intergenic | 55.0% | |
| CATCGCCCATGTCATGATCC+AGG | - | chr4.2:13571393-13571412 | None:intergenic | 55.0% | |
| CATGAAAAGTGGGAGGTGGG+AGG | - | chr4.2:13570248-13570267 | None:intergenic | 55.0% | |
| CCATGGCGCCAAATCGGTAT+CGG | - | chr4.2:13570632-13570651 | None:intergenic | 55.0% | |
| CTGGATCATGACATGGGCGA+TGG | + | chr4.2:13571391-13571410 | MS.gene08841:CDS | 55.0% | |
| GGGACGCAAAGTCAATTGCC+AGG | + | chr4.2:13571037-13571056 | MS.gene08841:CDS | 55.0% | |
| GTGGATCCTCAGCGAAGGTA+GGG | + | chr4.2:13573494-13573513 | MS.gene08841:CDS | 55.0% | |
| TCTCAGCAGGTGCAGCTTGT+CGG | - | chr4.2:13572974-13572993 | None:intergenic | 55.0% | |
| TGGTAGCCGGTGTGACAGTT+TGG | + | chr4.2:13572728-13572747 | MS.gene08841:CDS | 55.0% | |
| TTCTGTCGATGCCAGCGAAC+CGG | - | chr4.2:13572928-13572947 | None:intergenic | 55.0% | |
| TTGGAAGGCAACTGGGGTTC+TGG | + | chr4.2:13572747-13572766 | MS.gene08841:CDS | 55.0% | |
| ! | AGCCACGTGGCTAGTCCTAA+AGG | + | chr4.2:13573056-13573075 | MS.gene08841:CDS | 55.0% |
| ! | TCGAGCATTGTGCATGGCGA+TGG | + | chr4.2:13571112-13571131 | MS.gene08841:CDS | 55.0% |
| !! | TGCTGACTCGCACGAAGAAC+AGG | + | chr4.2:13572281-13572300 | MS.gene08841:CDS | 55.0% |
| !! | TTAGGACTAGCCACGTGGCT+AGG | - | chr4.2:13573056-13573075 | None:intergenic | 55.0% |
| CCAGACAGCTGTCTCTCAGC+AGG | - | chr4.2:13572987-13573006 | None:intergenic | 60.0% | |
| CCTGCTGAGAGACAGCTGTC+TGG | + | chr4.2:13572984-13573003 | MS.gene08841:CDS | 60.0% | |
| GAACCAACCAGCAGGTGAGG+TGG | - | chr4.2:13573120-13573139 | None:intergenic | 60.0% | |
| GATGCCAGCGAACCGGTTGA+TGG | - | chr4.2:13572921-13572940 | None:intergenic | 60.0% | |
| GGCAGCAAAGAAAGGGACCC+AGG | - | chr4.2:13571445-13571464 | None:intergenic | 60.0% | |
| GTCCCCTTCAGCGACTCAAG+TGG | + | chr4.2:13573352-13573371 | MS.gene08841:CDS | 60.0% | |
| TGAGTCGCTGAAGGGGACTC+AGG | - | chr4.2:13573350-13573369 | None:intergenic | 60.0% | |
| TGGGAACCAACCAGCAGGTG+AGG | - | chr4.2:13573123-13573142 | None:intergenic | 60.0% | |
| !! | CCGATACCGATTTGGCGCCA+TGG | + | chr4.2:13570629-13570648 | MS.gene08841:intron | 60.0% |
| !! | CGCCTTTAGGACTAGCCACG+TGG | - | chr4.2:13573061-13573080 | None:intergenic | 60.0% |
| !! | GGCAACTGGGGTTCTGGTTC+AGG | + | chr4.2:13572753-13572772 | MS.gene08841:CDS | 60.0% |
| !! | TCGCTGGCATCGACAGAAGC+AGG | + | chr4.2:13572930-13572949 | MS.gene08841:CDS | 60.0% |
| ! | CTACAGCGGATGGCGGTCTG+TGG | + | chr4.2:13570505-13570524 | MS.gene08841:intron | 65.0% |
| GCGGCGCCATGGCGCCAAAT+CGG | - | chr4.2:13570638-13570657 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 13569046 | 13573514 | 13569046 | ID=MS.gene08841 |
| chr4.2 | mRNA | 13569046 | 13573514 | 13569046 | ID=MS.gene08841.t1;Parent=MS.gene08841 |
| chr4.2 | exon | 13569046 | 13569082 | 13569046 | ID=MS.gene08841.t1.exon1;Parent=MS.gene08841.t1 |
| chr4.2 | CDS | 13569046 | 13569082 | 13569046 | ID=cds.MS.gene08841.t1;Parent=MS.gene08841.t1 |
| chr4.2 | exon | 13569295 | 13569465 | 13569295 | ID=MS.gene08841.t1.exon2;Parent=MS.gene08841.t1 |
| chr4.2 | CDS | 13569295 | 13569465 | 13569295 | ID=cds.MS.gene08841.t1;Parent=MS.gene08841.t1 |
| chr4.2 | exon | 13569608 | 13569775 | 13569608 | ID=MS.gene08841.t1.exon3;Parent=MS.gene08841.t1 |
| chr4.2 | CDS | 13569608 | 13569775 | 13569608 | ID=cds.MS.gene08841.t1;Parent=MS.gene08841.t1 |
| chr4.2 | exon | 13570936 | 13572774 | 13570936 | ID=MS.gene08841.t1.exon4;Parent=MS.gene08841.t1 |
| chr4.2 | CDS | 13570936 | 13572774 | 13570936 | ID=cds.MS.gene08841.t1;Parent=MS.gene08841.t1 |
| chr4.2 | exon | 13572868 | 13573514 | 13572868 | ID=MS.gene08841.t1.exon5;Parent=MS.gene08841.t1 |
| chr4.2 | CDS | 13572868 | 13573514 | 13572868 | ID=cds.MS.gene08841.t1;Parent=MS.gene08841.t1 |
| Gene Sequence |
| Protein sequence |
