Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08852.t1 | KEH20624.1 | 96.7 | 487 | 16 | 0 | 1 | 487 | 1 | 487 | 1.90E-266 | 927.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08852.t1 | A0A1P8B760 | 60.5 | 486 | 179 | 4 | 1 | 482 | 34 | 510 | 6.3e-154 | 545.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08852.t1 | A0A072TSY0 | 96.7 | 487 | 16 | 0 | 1 | 487 | 1 | 487 | 1.4e-266 | 927.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05624 | MS.gene08852 | 0.811569 | 6.56E-51 | -1.69E-46 |
| MS.gene056677 | MS.gene08852 | 0.80982 | 1.57E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08852.t1 | MTR_8g080870 | 96.715 | 487 | 16 | 0 | 1 | 487 | 1 | 487 | 0.0 | 968 |
| MS.gene08852.t1 | MTR_8g080840 | 87.064 | 487 | 62 | 1 | 1 | 487 | 30 | 515 | 0.0 | 875 |
| MS.gene08852.t1 | MTR_8g097220 | 86.335 | 483 | 65 | 1 | 2 | 484 | 28 | 509 | 0.0 | 865 |
| MS.gene08852.t1 | MTR_8g080880 | 86.448 | 487 | 65 | 1 | 1 | 487 | 30 | 515 | 0.0 | 863 |
| MS.gene08852.t1 | MTR_8g080890 | 86.570 | 484 | 64 | 1 | 1 | 484 | 31 | 513 | 0.0 | 856 |
| MS.gene08852.t1 | MTR_4g074030 | 61.111 | 486 | 179 | 7 | 2 | 480 | 25 | 507 | 0.0 | 572 |
| MS.gene08852.t1 | MTR_4g073970 | 58.689 | 305 | 113 | 7 | 176 | 471 | 1 | 301 | 2.86e-115 | 342 |
| MS.gene08852.t1 | MTR_4g073980 | 63.309 | 139 | 48 | 2 | 15 | 152 | 26 | 162 | 8.85e-52 | 173 |
| MS.gene08852.t1 | MTR_8g080850 | 91.026 | 78 | 7 | 0 | 410 | 487 | 1 | 78 | 1.32e-42 | 146 |
| MS.gene08852.t1 | MTR_8g095600 | 32.171 | 258 | 158 | 7 | 3 | 258 | 154 | 396 | 2.04e-28 | 118 |
| MS.gene08852.t1 | MTR_8g095600 | 32.171 | 258 | 158 | 7 | 3 | 258 | 170 | 412 | 7.43e-28 | 117 |
| MS.gene08852.t1 | MTR_8g095600 | 32.171 | 258 | 158 | 7 | 3 | 258 | 154 | 396 | 7.92e-28 | 117 |
| MS.gene08852.t1 | MTR_8g095600 | 32.171 | 258 | 158 | 7 | 3 | 258 | 154 | 396 | 8.07e-28 | 117 |
| MS.gene08852.t1 | MTR_3g048950 | 34.074 | 270 | 167 | 5 | 15 | 280 | 46 | 308 | 3.44e-26 | 112 |
| MS.gene08852.t1 | MTR_3g096980 | 26.027 | 511 | 299 | 20 | 11 | 487 | 135 | 600 | 6.49e-21 | 96.3 |
| MS.gene08852.t1 | MTR_2g010180 | 28.975 | 283 | 188 | 6 | 12 | 289 | 130 | 404 | 4.76e-20 | 93.6 |
| MS.gene08852.t1 | MTR_2g010180 | 28.975 | 283 | 188 | 6 | 12 | 289 | 144 | 418 | 4.76e-20 | 93.6 |
| MS.gene08852.t1 | MTR_2g010180 | 28.975 | 283 | 188 | 6 | 12 | 289 | 130 | 404 | 5.59e-20 | 93.6 |
| MS.gene08852.t1 | MTR_8g094740 | 25.194 | 516 | 309 | 20 | 3 | 482 | 128 | 602 | 3.14e-16 | 82.0 |
| MS.gene08852.t1 | MTR_1g082750 | 38.655 | 119 | 67 | 3 | 111 | 228 | 63 | 176 | 2.04e-13 | 72.4 |
| MS.gene08852.t1 | MTR_8g094740 | 28.571 | 245 | 163 | 5 | 3 | 242 | 128 | 365 | 6.62e-13 | 71.2 |
| MS.gene08852.t1 | MTR_4g094205 | 37.190 | 121 | 70 | 2 | 109 | 228 | 107 | 222 | 3.15e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08852.t1 | AT4G34880 | 62.140 | 486 | 171 | 4 | 1 | 482 | 34 | 510 | 0.0 | 577 |
| MS.gene08852.t1 | AT4G34880 | 55.052 | 485 | 161 | 5 | 1 | 482 | 34 | 464 | 1.10e-179 | 512 |
| MS.gene08852.t1 | AT5G07360 | 33.068 | 251 | 155 | 6 | 4 | 252 | 197 | 436 | 3.99e-27 | 115 |
| MS.gene08852.t1 | AT5G07360 | 33.068 | 251 | 155 | 6 | 4 | 252 | 197 | 436 | 3.99e-27 | 115 |
| MS.gene08852.t1 | AT3G25660 | 28.180 | 511 | 260 | 18 | 23 | 472 | 57 | 521 | 7.30e-25 | 108 |
| MS.gene08852.t1 | AT5G07360 | 32.669 | 251 | 149 | 7 | 4 | 252 | 197 | 429 | 5.38e-24 | 105 |
| MS.gene08852.t1 | AT5G64440 | 25.000 | 500 | 316 | 18 | 12 | 482 | 131 | 600 | 2.99e-20 | 94.4 |
| MS.gene08852.t1 | AT1G08980 | 41.176 | 119 | 64 | 3 | 111 | 228 | 64 | 177 | 1.92e-14 | 75.5 |
| MS.gene08852.t1 | AT5G09420 | 37.607 | 117 | 67 | 2 | 109 | 224 | 105 | 216 | 8.05e-11 | 64.7 |
Find 110 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATTTATACTCACCAATTT+TGG | 0.071732 | 4.2:-13663310 | None:intergenic |
| GTTGCATGGAATACCTATTT+TGG | 0.183488 | 4.2:+13660864 | MS.gene08852:CDS |
| CAGCCATTTGGAATTTGTTT+TGG | 0.197424 | 4.2:+13663656 | MS.gene08852:CDS |
| CAAGTTGTCTTGATGTTAAT+TGG | 0.201405 | 4.2:-13660705 | None:intergenic |
| ATGACAAGATGGTCAGAAAA+TGG | 0.246254 | 4.2:+13663509 | MS.gene08852:CDS |
| AATATCAGTAGCTGCAAATT+TGG | 0.248946 | 4.2:+13661537 | MS.gene08852:CDS |
| TTGATGTTAATTGGTTTCTT+TGG | 0.276109 | 4.2:-13660696 | None:intergenic |
| TTTAGTAGCATACTTGCTAT+TGG | 0.285041 | 4.2:+13663590 | MS.gene08852:CDS |
| TGAGTGAGTGGTCAAATTAC+AGG | 0.310539 | 4.2:+13661028 | MS.gene08852:CDS |
| GAATCTGGTGCTATCATATT+GGG | 0.314103 | 4.2:+13660994 | MS.gene08852:CDS |
| CTAAAGAAAGACGGACTAAT+AGG | 0.316078 | 4.2:+13662252 | MS.gene08852:CDS |
| ATGTTATCCTTAACCAAAAT+AGG | 0.317243 | 4.2:-13660877 | None:intergenic |
| CAGGGATCATCCAAAGTATA+TGG | 0.328369 | 4.2:-13661493 | None:intergenic |
| GGAATCTGGTGCTATCATAT+TGG | 0.328454 | 4.2:+13660993 | MS.gene08852:CDS |
| CAGGCAGAGAGGTGCAGTTT+TGG | 0.331310 | 4.2:+13663123 | MS.gene08852:intron |
| TACCCGACTGTGTCTTGCCT+TGG | 0.332981 | 4.2:-13661682 | None:intergenic |
| GGCTCCATCTTATGCCCTTC+AGG | 0.344879 | 4.2:+13661589 | MS.gene08852:CDS |
| AATTGAGCATAGCCACCTTC+TGG | 0.348881 | 4.2:-13662228 | None:intergenic |
| AAGCACCTGGTTCTCTTTCA+AGG | 0.351952 | 4.2:+13660842 | MS.gene08852:CDS |
| ATGCTACTAAAGGATGAAAA+AGG | 0.355679 | 4.2:-13663578 | None:intergenic |
| CAGCTTGCAACATGATATCT+TGG | 0.356824 | 4.2:-13663439 | None:intergenic |
| GTGTCTTGCCTTGGGCTGAT+TGG | 0.357682 | 4.2:-13661673 | None:intergenic |
| TCCAAGACACCTTTGAGAAC+TGG | 0.358911 | 4.2:-13660763 | None:intergenic |
| TCTGCTTGTGCTAATGCATC+TGG | 0.369297 | 4.2:-13660793 | None:intergenic |
| GCTGAAAAGACAAATGGAAT+TGG | 0.382745 | 4.2:+13663458 | MS.gene08852:CDS |
| TCTGATACAGTCCTGCAAAT+TGG | 0.383017 | 4.2:-13662129 | None:intergenic |
| GTTACCAAGTTAAGGGAATC+TGG | 0.384512 | 4.2:+13660979 | MS.gene08852:CDS |
| TATGAAAAGGGTCAGCCATT+TGG | 0.384634 | 4.2:+13663644 | MS.gene08852:CDS |
| CTTGCTATTGGAGGTTATCC+TGG | 0.391166 | 4.2:+13663602 | MS.gene08852:CDS |
| CAAACTTCTGACTTTCGAAA+AGG | 0.394639 | 4.2:-13663758 | None:intergenic |
| CCTGCTGGAACAATGATTCC+AGG | 0.396619 | 4.2:-13663620 | None:intergenic |
| TACCTTTCCTTGTCCACCTC+TGG | 0.402662 | 4.2:-13661079 | None:intergenic |
| CCAAGACACCTTTGAGAACT+GGG | 0.403077 | 4.2:-13660762 | None:intergenic |
| TAGGAGGAACTTGATAAGTA+TGG | 0.408411 | 4.2:+13663416 | MS.gene08852:intron |
| ACCCGACTGTGTCTTGCCTT+GGG | 0.412367 | 4.2:-13661681 | None:intergenic |
| TTTGCAGAATCCATATACTT+TGG | 0.416501 | 4.2:+13661483 | MS.gene08852:intron |
| TAAGCAATTTCAATCAACTT+TGG | 0.417086 | 4.2:-13663698 | None:intergenic |
| TAAGGATAACATTGCAACTA+AGG | 0.417159 | 4.2:+13660888 | MS.gene08852:CDS |
| TGGTCAAATTACAGGTCTAA+TGG | 0.421009 | 4.2:+13661036 | MS.gene08852:CDS |
| AGGTGTTGTTACCAAGTTAA+GGG | 0.431180 | 4.2:+13660972 | MS.gene08852:CDS |
| CAGGTGTTGTTACCAAGTTA+AGG | 0.431264 | 4.2:+13660971 | MS.gene08852:CDS |
| CCCAGTTCTCAAAGGTGTCT+TGG | 0.444958 | 4.2:+13660762 | MS.gene08852:CDS |
| AGCACCAGATTCCCTTAACT+TGG | 0.473094 | 4.2:-13660983 | None:intergenic |
| TTGCAAGCTGAAAAGACAAA+TGG | 0.474253 | 4.2:+13663452 | MS.gene08852:CDS |
| TTCATAGCAATCTCTTCACT+TGG | 0.477749 | 4.2:-13663190 | None:intergenic |
| TGACAAGATGGTCAGAAAAT+GGG | 0.481903 | 4.2:+13663510 | MS.gene08852:CDS |
| AGCTACACCTGAAAACGTTA+AGG | 0.482219 | 4.2:+13662343 | MS.gene08852:CDS |
| GCCCAAGGCAAGACACAGTC+GGG | 0.483498 | 4.2:+13661680 | MS.gene08852:CDS |
| GGTTCTCTTTCAAGGTTGCA+TGG | 0.486306 | 4.2:+13660850 | MS.gene08852:CDS |
| GTGATGCTACTAAGTCTTTG+AGG | 0.490355 | 4.2:-13663243 | None:intergenic |
| TGTTCCAGCAGGATATGAAA+AGG | 0.490531 | 4.2:+13663631 | MS.gene08852:CDS |
| AATAGCAAGTATGCTACTAA+AGG | 0.492751 | 4.2:-13663588 | None:intergenic |
| AGTAGCATACTTGCTATTGG+AGG | 0.497454 | 4.2:+13663593 | MS.gene08852:CDS |
| TTTGAATATTGATTTGGTTG+AGG | 0.503213 | 4.2:-13660738 | None:intergenic |
| CCTGGAATCATTGTTCCAGC+AGG | 0.504120 | 4.2:+13663620 | MS.gene08852:CDS |
| TTCAGGTCTTAACTCAGTGG+TGG | 0.510569 | 4.2:+13661606 | MS.gene08852:CDS |
| GTAACAACACCTGCATCTCT+TGG | 0.511275 | 4.2:-13660961 | None:intergenic |
| CCTCCAAAACAAATTCCAAA+TGG | 0.513160 | 4.2:-13663659 | None:intergenic |
| GGACTAATAGGAAAGAGAAT+AGG | 0.515996 | 4.2:+13662264 | MS.gene08852:CDS |
| TGCAACCTTGAAAGAGAACC+AGG | 0.523206 | 4.2:-13660847 | None:intergenic |
| TAGAGCTGATCAAGAGAGAA+GGG | 0.527368 | 4.2:+13660816 | MS.gene08852:CDS |
| AAGACCTGAAGGGCATAAGA+TGG | 0.527458 | 4.2:-13661593 | None:intergenic |
| TCTGACTTTCGAAAAGGAGG+TGG | 0.531988 | 4.2:-13663752 | None:intergenic |
| CCTCTGGCACTCCAACCACT+TGG | 0.532038 | 4.2:-13661063 | None:intergenic |
| GAAAGTGTCAATGCCTGCTA+TGG | 0.533543 | 4.2:-13662172 | None:intergenic |
| ACATCTGCCAAGCTTCTCAC+TGG | 0.542835 | 4.2:-13663265 | None:intergenic |
| TCAGTGGTGCCAAGAGATGC+AGG | 0.543965 | 4.2:+13660952 | MS.gene08852:CDS |
| AGCATCACCAGTGAGAAGCT+TGG | 0.549066 | 4.2:+13663258 | MS.gene08852:CDS |
| GGCCACTGAATTCTCAATTG+AGG | 0.551453 | 4.2:+13660642 | MS.gene08852:CDS |
| GATAAGCTAAACACTACTGC+AGG | 0.552473 | 4.2:+13660910 | MS.gene08852:CDS |
| TATGTTCTTGAAACCATAGC+AGG | 0.553334 | 4.2:+13662159 | MS.gene08852:CDS |
| GTTGGTCTCACTAGTAGAGC+AGG | 0.557670 | 4.2:+13661643 | MS.gene08852:CDS |
| TGCCAGAGGTGGACAAGGAA+AGG | 0.558940 | 4.2:+13661077 | MS.gene08852:CDS |
| TGATCCACTACTTGATCCAC+AGG | 0.561542 | 4.2:-13661512 | None:intergenic |
| AATTGAGAATTCAGTGGCCA+TGG | 0.562344 | 4.2:-13660638 | None:intergenic |
| CTAATGGAGCTCCAAGTGGT+TGG | 0.563231 | 4.2:+13661052 | MS.gene08852:CDS |
| GTTCCAGCAGGATATGAAAA+GGG | 0.570325 | 4.2:+13663632 | MS.gene08852:CDS |
| GGAAGGCCACTTTGAGTGAG+TGG | 0.570811 | 4.2:+13661016 | MS.gene08852:CDS |
| AGTTCTCAAAGGTGTCTTGG+AGG | 0.575693 | 4.2:+13660765 | MS.gene08852:CDS |
| TGGAGTGCCAGAGGTGGACA+AGG | 0.582665 | 4.2:+13661072 | MS.gene08852:CDS |
| AACAAATAAACTTGATGCTG+TGG | 0.584496 | 4.2:+13663550 | MS.gene08852:CDS |
| ACCACTGAGTTAAGACCTGA+AGG | 0.584572 | 4.2:-13661604 | None:intergenic |
| GCTCAATTTCTAAAGAAAGA+CGG | 0.585283 | 4.2:+13662243 | MS.gene08852:CDS |
| CATTATTAAACATGACAAGA+TGG | 0.586030 | 4.2:+13663498 | MS.gene08852:CDS |
| TCAGGTCTTAACTCAGTGGT+GGG | 0.586914 | 4.2:+13661607 | MS.gene08852:CDS |
| ACTTCTGACTTTCGAAAAGG+AGG | 0.592108 | 4.2:-13663755 | None:intergenic |
| ATAGAGCTGATCAAGAGAGA+AGG | 0.596004 | 4.2:+13660815 | MS.gene08852:CDS |
| AGCCCAAGGCAAGACACAGT+CGG | 0.598710 | 4.2:+13661679 | MS.gene08852:CDS |
| TGGTGCTATCATATTGGGGA+AGG | 0.599173 | 4.2:+13660999 | MS.gene08852:CDS |
| AATTTGGTGACTGTGTCACT+TGG | 0.602109 | 4.2:+13661553 | MS.gene08852:CDS |
| ATTTGACCACTCACTCAAAG+TGG | 0.602997 | 4.2:-13661022 | None:intergenic |
| CCCTTCAGGTCTTAACTCAG+TGG | 0.604539 | 4.2:+13661603 | MS.gene08852:CDS |
| CCAAGTGGTTGGAGTGCCAG+AGG | 0.606261 | 4.2:+13661063 | MS.gene08852:CDS |
| ATTCAAAACCCAGTTCTCAA+AGG | 0.608358 | 4.2:+13660754 | MS.gene08852:CDS |
| TCAAAGTATATTCCAGAAGG+TGG | 0.608727 | 4.2:+13662216 | MS.gene08852:CDS |
| AGTGGTTGGAGTGCCAGAGG+TGG | 0.615681 | 4.2:+13661066 | MS.gene08852:CDS |
| GCATCAAAGTATATTCCAGA+AGG | 0.627357 | 4.2:+13662213 | MS.gene08852:CDS |
| GTGGGCATCAAACCAACAGT+TGG | 0.630288 | 4.2:+13661625 | MS.gene08852:CDS |
| CTACTAGTGAGACCAACTGT+TGG | 0.631026 | 4.2:-13661637 | None:intergenic |
| AGGGCATAAGATGGAGCCAT+CGG | 0.636027 | 4.2:-13661584 | None:intergenic |
| TTCCTCAATTGAGAATTCAG+TGG | 0.636730 | 4.2:-13660644 | None:intergenic |
| GATCCCTGTGGATCAAGTAG+TGG | 0.645260 | 4.2:+13661508 | MS.gene08852:CDS |
| GTGTAATTCCAATCAGCCCA+AGG | 0.647537 | 4.2:+13661665 | MS.gene08852:CDS |
| AATCTGGTGCTATCATATTG+GGG | 0.666419 | 4.2:+13660995 | MS.gene08852:CDS |
| GATGAAATTATCAGGCAGAG+AGG | 0.691759 | 4.2:+13663112 | MS.gene08852:intron |
| TATACTTTGGATGATCCCTG+TGG | 0.698609 | 4.2:+13661496 | MS.gene08852:CDS |
| AGGTCTAATGGAGCTCCAAG+TGG | 0.700368 | 4.2:+13661048 | MS.gene08852:CDS |
| TCACTTGGTACTGAAACCGA+TGG | 0.716676 | 4.2:+13661568 | MS.gene08852:CDS |
| CCACTGAGTTAAGACCTGAA+GGG | 0.717424 | 4.2:-13661603 | None:intergenic |
| GATCCACTACTTGATCCACA+GGG | 0.772110 | 4.2:-13661511 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATTAATAAATATTAATC+TGG | + | chr4.2:13663362-13663381 | MS.gene08852:intron | 10.0% |
| !! | TCAATTTAAATTATTTAGTA+TGG | + | chr4.2:13661155-13661174 | MS.gene08852:intron | 10.0% |
| !! | AATTGTTGTATAAAAATTGT+AGG | + | chr4.2:13663397-13663416 | MS.gene08852:intron | 15.0% |
| !! | TAATGTAAATGTAAGTAAAT+AGG | - | chr4.2:13663060-13663079 | None:intergenic | 15.0% |
| !! | TTTATACAACAATTATATGA+TGG | - | chr4.2:13663391-13663410 | None:intergenic | 15.0% |
| !!! | AAATTATTTTAGTCTTTCAT+AGG | + | chr4.2:13662651-13662670 | MS.gene08852:intron | 15.0% |
| !!! | TGATTTTGTTTATTTGTTTA+TGG | + | chr4.2:13663332-13663351 | MS.gene08852:intron | 15.0% |
| !!! | TTTTATAAATATCATTGCAA+AGG | - | chr4.2:13662586-13662605 | None:intergenic | 15.0% |
| !! | ATAACATTGATGAAATTATC+AGG | + | chr4.2:13663104-13663123 | MS.gene08852:intron | 20.0% |
| !! | GACTAAAATAATTTCATTCA+AGG | - | chr4.2:13662645-13662664 | None:intergenic | 20.0% |
| !! | GCAAGAATATTAGAATATAT+TGG | - | chr4.2:13662029-13662048 | None:intergenic | 20.0% |
| !! | TAGACTATAAATTCTATGTT+TGG | - | chr4.2:13661304-13661323 | None:intergenic | 20.0% |
| !! | TCTTAGTTAATTTAGTTAAC+TGG | + | chr4.2:13661115-13661134 | MS.gene08852:intron | 20.0% |
| !! | TTTATTTGTTTATGGATACT+TGG | + | chr4.2:13663340-13663359 | MS.gene08852:intron | 20.0% |
| ! | AACTAACCTAAACATGATTA+TGG | + | chr4.2:13661333-13661352 | MS.gene08852:intron | 25.0% |
| ! | AATTTAAGCTGTCCAAAATT+TGG | + | chr4.2:13662960-13662979 | MS.gene08852:intron | 25.0% |
| ! | ACTAACCTAAACATGATTAT+GGG | + | chr4.2:13661334-13661353 | MS.gene08852:intron | 25.0% |
| ! | ATGTTATCCTTAACCAAAAT+AGG | - | chr4.2:13660880-13660899 | None:intergenic | 25.0% |
| ! | CAATAAGAAAAACCCAAAAT+TGG | + | chr4.2:13663297-13663316 | MS.gene08852:CDS | 25.0% |
| ! | CATTATTAAACATGACAAGA+TGG | + | chr4.2:13663498-13663517 | MS.gene08852:CDS | 25.0% |
| ! | TAAATTAACTAAGAAGTAGC+AGG | - | chr4.2:13661109-13661128 | None:intergenic | 25.0% |
| ! | TAAGCAATTTCAATCAACTT+TGG | - | chr4.2:13663701-13663720 | None:intergenic | 25.0% |
| ! | TCATGTTAGATAAACTATGA+CGG | + | chr4.2:13662704-13662723 | MS.gene08852:intron | 25.0% |
| ! | TGTTGTATAAAAATTGTAGG+AGG | + | chr4.2:13663400-13663419 | MS.gene08852:intron | 25.0% |
| !! | ACATTTATACTCACCAATTT+TGG | - | chr4.2:13663313-13663332 | None:intergenic | 25.0% |
| !! | CATTTATACTCACCAATTTT+GGG | - | chr4.2:13663312-13663331 | None:intergenic | 25.0% |
| !! | TTGATGTTAATTGGTTTCTT+TGG | - | chr4.2:13660699-13660718 | None:intergenic | 25.0% |
| !! | TTGTAACTAATTTTCATGAC+AGG | - | chr4.2:13663022-13663041 | None:intergenic | 25.0% |
| !!! | ATTTGATCTTTATTTTCTGC+AGG | - | chr4.2:13662830-13662849 | None:intergenic | 25.0% |
| !!! | TATATCAAACTTCAAGTTGT+TGG | - | chr4.2:13662437-13662456 | None:intergenic | 25.0% |
| !!! | TCATGTTTTTTTACAAACCA+TGG | + | chr4.2:13662677-13662696 | MS.gene08852:intron | 25.0% |
| !!! | TTTGAATATTGATTTGGTTG+AGG | - | chr4.2:13660741-13660760 | None:intergenic | 25.0% |
| !!! | TTTTGGGTTTTTCTTATTGA+AGG | - | chr4.2:13663296-13663315 | None:intergenic | 25.0% |
| AACAAATAAACTTGATGCTG+TGG | + | chr4.2:13663550-13663569 | MS.gene08852:CDS | 30.0% | |
| AATAGCAAGTATGCTACTAA+AGG | - | chr4.2:13663591-13663610 | None:intergenic | 30.0% | |
| AATATCAGTAGCTGCAAATT+TGG | + | chr4.2:13661537-13661556 | MS.gene08852:CDS | 30.0% | |
| ACTTCTGATAAGAGCAAAAT+TGG | + | chr4.2:13661938-13661957 | MS.gene08852:intron | 30.0% | |
| ATCAACTCACTTTCAATATC+AGG | - | chr4.2:13661233-13661252 | None:intergenic | 30.0% | |
| ATGACTATACACAATTCTCA+TGG | + | chr4.2:13662392-13662411 | MS.gene08852:intron | 30.0% | |
| ATGCTACTAAAGGATGAAAA+AGG | - | chr4.2:13663581-13663600 | None:intergenic | 30.0% | |
| CAAGTTGTCTTGATGTTAAT+TGG | - | chr4.2:13660708-13660727 | None:intergenic | 30.0% | |
| GAAAAATTGGAAATGCTTAC+AGG | + | chr4.2:13662003-13662022 | MS.gene08852:intron | 30.0% | |
| TAAGGATAACATTGCAACTA+AGG | + | chr4.2:13660888-13660907 | MS.gene08852:CDS | 30.0% | |
| TACTAAACGCAATAGAAATG+TGG | - | chr4.2:13661726-13661745 | None:intergenic | 30.0% | |
| TCTGATTAAGTAATGAACAC+AGG | - | chr4.2:13662920-13662939 | None:intergenic | 30.0% | |
| TTTGCAGAATCCATATACTT+TGG | + | chr4.2:13661483-13661502 | MS.gene08852:intron | 30.0% | |
| ! | GCTCAATTTCTAAAGAAAGA+CGG | + | chr4.2:13662243-13662262 | MS.gene08852:CDS | 30.0% |
| ! | TAGAACAATGTCTTTTGACA+GGG | - | chr4.2:13662070-13662089 | None:intergenic | 30.0% |
| ! | TGTAGCTTGAATGTTTTATC+CGG | - | chr4.2:13662330-13662349 | None:intergenic | 30.0% |
| ! | TTAGAACAATGTCTTTTGAC+AGG | - | chr4.2:13662071-13662090 | None:intergenic | 30.0% |
| ! | TTATCTAACATGATTAGCCA+TGG | - | chr4.2:13662697-13662716 | None:intergenic | 30.0% |
| !! | ATGGAGTTGTTTGTTGTTAT+CGG | + | chr4.2:13662411-13662430 | MS.gene08852:intron | 30.0% |
| !! | ATTGAAAGTGAGTTGATCAA+AGG | + | chr4.2:13661236-13661255 | MS.gene08852:intron | 30.0% |
| !! | TCACTTTTGTAATTGAGTCT+TGG | - | chr4.2:13662745-13662764 | None:intergenic | 30.0% |
| !! | TTTAGTAGCATACTTGCTAT+TGG | + | chr4.2:13663590-13663609 | MS.gene08852:CDS | 30.0% |
| !! | TTTTAGAAATGACACTTTCC+CGG | + | chr4.2:13662308-13662327 | MS.gene08852:CDS | 30.0% |
| !!! | ATTTGTTTTGGAGGTTTGAA+AGG | + | chr4.2:13663668-13663687 | MS.gene08852:CDS | 30.0% |
| !!! | CTGGGTTTTGAATATTGATT+TGG | - | chr4.2:13660747-13660766 | None:intergenic | 30.0% |
| !!! | TGGAATACCTATTTTGGTTA+AGG | + | chr4.2:13660870-13660889 | MS.gene08852:CDS | 30.0% |
| !!! | TTTGTTTTGGAGGTTTGAAA+GGG | + | chr4.2:13663669-13663688 | MS.gene08852:CDS | 30.0% |
| AACCTAAACATGATTATGGG+AGG | + | chr4.2:13661337-13661356 | MS.gene08852:intron | 35.0% | |
| AAGTAAATAGGTCTGCAGTA+TGG | - | chr4.2:13663048-13663067 | None:intergenic | 35.0% | |
| AATCAATTCAGTCATTCACG+CGG | - | chr4.2:13661203-13661222 | None:intergenic | 35.0% | |
| AATGTGTAACATCAGTTGTG+TGG | + | chr4.2:13662095-13662114 | MS.gene08852:intron | 35.0% | |
| ACCGAAATCATTTCCAAAGT+CGG | + | chr4.2:13661275-13661294 | MS.gene08852:intron | 35.0% | |
| ATGACAAGATGGTCAGAAAA+TGG | + | chr4.2:13663509-13663528 | MS.gene08852:CDS | 35.0% | |
| ATTCAAAACCCAGTTCTCAA+AGG | + | chr4.2:13660754-13660773 | MS.gene08852:CDS | 35.0% | |
| CAAACTTCTGACTTTCGAAA+AGG | - | chr4.2:13663761-13663780 | None:intergenic | 35.0% | |
| CCTCCAAAACAAATTCCAAA+TGG | - | chr4.2:13663662-13663681 | None:intergenic | 35.0% | |
| CTGATAAGAGCAAAATTGGA+TGG | + | chr4.2:13661942-13661961 | MS.gene08852:intron | 35.0% | |
| GCATCAAAGTATATTCCAGA+AGG | + | chr4.2:13662213-13662232 | MS.gene08852:CDS | 35.0% | |
| GCTGAAAAGACAAATGGAAT+TGG | + | chr4.2:13663458-13663477 | MS.gene08852:CDS | 35.0% | |
| GGACTAATAGGAAAGAGAAT+AGG | + | chr4.2:13662264-13662283 | MS.gene08852:CDS | 35.0% | |
| GTTCATAGTTACCGATAAGT+GGG | + | chr4.2:13661177-13661196 | MS.gene08852:intron | 35.0% | |
| TACCTCCCATAATCATGTTT+AGG | - | chr4.2:13661342-13661361 | None:intergenic | 35.0% | |
| TAGGAGGAACTTGATAAGTA+TGG | + | chr4.2:13663416-13663435 | MS.gene08852:intron | 35.0% | |
| TATGTTCTTGAAACCATAGC+AGG | + | chr4.2:13662159-13662178 | MS.gene08852:CDS | 35.0% | |
| TCAAAGTATATTCCAGAAGG+TGG | + | chr4.2:13662216-13662235 | MS.gene08852:CDS | 35.0% | |
| TGACAAGATGGTCAGAAAAT+GGG | + | chr4.2:13663510-13663529 | MS.gene08852:CDS | 35.0% | |
| TGGTCAAATTACAGGTCTAA+TGG | + | chr4.2:13661036-13661055 | MS.gene08852:CDS | 35.0% | |
| TTCATAGCAATCTCTTCACT+TGG | - | chr4.2:13663193-13663212 | None:intergenic | 35.0% | |
| TTCCTCAATTGAGAATTCAG+TGG | - | chr4.2:13660647-13660666 | None:intergenic | 35.0% | |
| TTGCAAGCTGAAAAGACAAA+TGG | + | chr4.2:13663452-13663471 | MS.gene08852:CDS | 35.0% | |
| TTGGACAGCTTAAATTGTGT+TGG | - | chr4.2:13662956-13662975 | None:intergenic | 35.0% | |
| TTTCATTCAAGGATGCTGAT+AGG | - | chr4.2:13662634-13662653 | None:intergenic | 35.0% | |
| ! | ATCAAAGGTAGGGATGATTT+TGG | + | chr4.2:13661251-13661270 | MS.gene08852:intron | 35.0% |
| ! | CACATTTGTTTCTCTCTATC+AGG | - | chr4.2:13661858-13661877 | None:intergenic | 35.0% |
| ! | CTTTTGTAATTGAGTCTTGG+TGG | - | chr4.2:13662742-13662761 | None:intergenic | 35.0% |
| ! | GTAGCTTGAATGTTTTATCC+GGG | - | chr4.2:13662329-13662348 | None:intergenic | 35.0% |
| ! | GTTGCATGGAATACCTATTT+TGG | + | chr4.2:13660864-13660883 | MS.gene08852:CDS | 35.0% |
| ! | TCAAAGGTAGGGATGATTTT+GGG | + | chr4.2:13661252-13661271 | MS.gene08852:intron | 35.0% |
| ! | TCCGACTTTGGAAATGATTT+CGG | - | chr4.2:13661279-13661298 | None:intergenic | 35.0% |
| ! | TTAGCTACCTTAACGTTTTC+AGG | - | chr4.2:13662353-13662372 | None:intergenic | 35.0% |
| !! | AAAGTGAGTTGATCAAAGGT+AGG | + | chr4.2:13661240-13661259 | MS.gene08852:intron | 35.0% |
| !! | AAGTGAGTTGATCAAAGGTA+GGG | + | chr4.2:13661241-13661260 | MS.gene08852:intron | 35.0% |
| !! | AATCTGGTGCTATCATATTG+GGG | + | chr4.2:13660995-13661014 | MS.gene08852:CDS | 35.0% |
| !! | AGGTGTTGTTACCAAGTTAA+GGG | + | chr4.2:13660972-13660991 | MS.gene08852:CDS | 35.0% |
| !! | CAGCCATTTGGAATTTGTTT+TGG | + | chr4.2:13663656-13663675 | MS.gene08852:CDS | 35.0% |
| !! | CTAAAGAAAGACGGACTAAT+AGG | + | chr4.2:13662252-13662271 | MS.gene08852:CDS | 35.0% |
| !! | GAAATAAGTGAGAGAGCATT+AGG | + | chr4.2:13661374-13661393 | MS.gene08852:intron | 35.0% |
| !! | GAATCTGGTGCTATCATATT+GGG | + | chr4.2:13660994-13661013 | MS.gene08852:CDS | 35.0% |
| !!! | CCATTTGGAATTTGTTTTGG+AGG | + | chr4.2:13663659-13663678 | MS.gene08852:CDS | 35.0% |
| ACTTCTGACTTTCGAAAAGG+AGG | - | chr4.2:13663758-13663777 | None:intergenic | 40.0% | |
| AGCTACACCTGAAAACGTTA+AGG | + | chr4.2:13662343-13662362 | MS.gene08852:CDS | 40.0% | |
| ATAGAGCTGATCAAGAGAGA+AGG | + | chr4.2:13660815-13660834 | MS.gene08852:CDS | 40.0% | |
| ATTTGACCACTCACTCAAAG+TGG | - | chr4.2:13661025-13661044 | None:intergenic | 40.0% | |
| CAGCTTGCAACATGATATCT+TGG | - | chr4.2:13663442-13663461 | None:intergenic | 40.0% | |
| CAGGGATCATCCAAAGTATA+TGG | - | chr4.2:13661496-13661515 | None:intergenic | 40.0% | |
| GATAAGCTAAACACTACTGC+AGG | + | chr4.2:13660910-13660929 | MS.gene08852:CDS | 40.0% | |
| GATGAAATTATCAGGCAGAG+AGG | + | chr4.2:13663112-13663131 | MS.gene08852:intron | 40.0% | |
| GGTTCATAGTTACCGATAAG+TGG | + | chr4.2:13661176-13661195 | MS.gene08852:intron | 40.0% | |
| GTGATGCTACTAAGTCTTTG+AGG | - | chr4.2:13663246-13663265 | None:intergenic | 40.0% | |
| GTTACCAAGTTAAGGGAATC+TGG | + | chr4.2:13660979-13660998 | MS.gene08852:CDS | 40.0% | |
| GTTCCAGCAGGATATGAAAA+GGG | + | chr4.2:13663632-13663651 | MS.gene08852:CDS | 40.0% | |
| TAGAGCTGATCAAGAGAGAA+GGG | + | chr4.2:13660816-13660835 | MS.gene08852:CDS | 40.0% | |
| TATACTTTGGATGATCCCTG+TGG | + | chr4.2:13661496-13661515 | MS.gene08852:CDS | 40.0% | |
| TATGAAAAGGGTCAGCCATT+TGG | + | chr4.2:13663644-13663663 | MS.gene08852:CDS | 40.0% | |
| TCTGATACAGTCCTGCAAAT+TGG | - | chr4.2:13662132-13662151 | None:intergenic | 40.0% | |
| TGAGTGAGTGGTCAAATTAC+AGG | + | chr4.2:13661028-13661047 | MS.gene08852:CDS | 40.0% | |
| TGTGTGTGTGCGTGAAAAAT+TGG | + | chr4.2:13661990-13662009 | MS.gene08852:intron | 40.0% | |
| TGTTCCAGCAGGATATGAAA+AGG | + | chr4.2:13663631-13663650 | MS.gene08852:CDS | 40.0% | |
| ! | AATTTGGTGACTGTGTCACT+TGG | + | chr4.2:13661553-13661572 | MS.gene08852:CDS | 40.0% |
| ! | ACAATGTCTTTTGACAGGGA+AGG | - | chr4.2:13662066-13662085 | None:intergenic | 40.0% |
| ! | TGTCACCATCGTCCAAATTT+TGG | - | chr4.2:13662975-13662994 | None:intergenic | 40.0% |
| ! | TTTTGTACAGGCCAATTTGC+AGG | + | chr4.2:13662118-13662137 | MS.gene08852:intron | 40.0% |
| !! | AATTGAGTCTTGGTGGTGTA+TGG | - | chr4.2:13662735-13662754 | None:intergenic | 40.0% |
| !! | ACACACACAAGATTTTGGCA+TGG | - | chr4.2:13661977-13661996 | None:intergenic | 40.0% |
| !! | AGTAGCATACTTGCTATTGG+AGG | + | chr4.2:13663593-13663612 | MS.gene08852:CDS | 40.0% |
| !! | ATAAGTGAGAGAGCATTAGG+TGG | + | chr4.2:13661377-13661396 | MS.gene08852:intron | 40.0% |
| !! | CAGGTGTTGTTACCAAGTTA+AGG | + | chr4.2:13660971-13660990 | MS.gene08852:CDS | 40.0% |
| !! | GGAATCTGGTGCTATCATAT+TGG | + | chr4.2:13660993-13661012 | MS.gene08852:CDS | 40.0% |
| !! | TAAGTGAGAGAGCATTAGGT+GGG | + | chr4.2:13661378-13661397 | MS.gene08852:intron | 40.0% |
| !!! | TCAGTTGTGTGGTTTTGTAC+AGG | + | chr4.2:13662106-13662125 | MS.gene08852:intron | 40.0% |
| AATGTGGACAAACGCTGTAC+AGG | - | chr4.2:13661710-13661729 | None:intergenic | 45.0% | |
| AATTGAGCATAGCCACCTTC+TGG | - | chr4.2:13662231-13662250 | None:intergenic | 45.0% | |
| ACCACTGAGTTAAGACCTGA+AGG | - | chr4.2:13661607-13661626 | None:intergenic | 45.0% | |
| AGCACCAGATTCCCTTAACT+TGG | - | chr4.2:13660986-13661005 | None:intergenic | 45.0% | |
| CCACTGAGTTAAGACCTGAA+GGG | - | chr4.2:13661606-13661625 | None:intergenic | 45.0% | |
| CTACTAGTGAGACCAACTGT+TGG | - | chr4.2:13661640-13661659 | None:intergenic | 45.0% | |
| GATCCACTACTTGATCCACA+GGG | - | chr4.2:13661514-13661533 | None:intergenic | 45.0% | |
| GCTGTCCAAAATTTGGACGA+TGG | + | chr4.2:13662967-13662986 | MS.gene08852:intron | 45.0% | |
| GGCCACTGAATTCTCAATTG+AGG | + | chr4.2:13660642-13660661 | MS.gene08852:CDS | 45.0% | |
| GGTTCTCTTTCAAGGTTGCA+TGG | + | chr4.2:13660850-13660869 | MS.gene08852:CDS | 45.0% | |
| GTAACAACACCTGCATCTCT+TGG | - | chr4.2:13660964-13660983 | None:intergenic | 45.0% | |
| GTGTAATTCCAATCAGCCCA+AGG | + | chr4.2:13661665-13661684 | MS.gene08852:CDS | 45.0% | |
| TCAGGTCTTAACTCAGTGGT+GGG | + | chr4.2:13661607-13661626 | MS.gene08852:CDS | 45.0% | |
| TCTGACTTTCGAAAAGGAGG+TGG | - | chr4.2:13663755-13663774 | None:intergenic | 45.0% | |
| TCTGCTTGTGCTAATGCATC+TGG | - | chr4.2:13660796-13660815 | None:intergenic | 45.0% | |
| TGATCCACTACTTGATCCAC+AGG | - | chr4.2:13661515-13661534 | None:intergenic | 45.0% | |
| TGCAACCTTGAAAGAGAACC+AGG | - | chr4.2:13660850-13660869 | None:intergenic | 45.0% | |
| TTCAGGTCTTAACTCAGTGG+TGG | + | chr4.2:13661606-13661625 | MS.gene08852:CDS | 45.0% | |
| ! | AAGACCTGAAGGGCATAAGA+TGG | - | chr4.2:13661596-13661615 | None:intergenic | 45.0% |
| ! | AAGCACCTGGTTCTCTTTCA+AGG | + | chr4.2:13660842-13660861 | MS.gene08852:CDS | 45.0% |
| ! | CCAAGACACCTTTGAGAACT+GGG | - | chr4.2:13660765-13660784 | None:intergenic | 45.0% |
| ! | CGCACACACACACAAGATTT+TGG | - | chr4.2:13661982-13662001 | None:intergenic | 45.0% |
| ! | CTATGTTTGGCTTCCGACTT+TGG | - | chr4.2:13661291-13661310 | None:intergenic | 45.0% |
| ! | TCACTTGGTACTGAAACCGA+TGG | + | chr4.2:13661568-13661587 | MS.gene08852:CDS | 45.0% |
| ! | TCCAAGACACCTTTGAGAAC+TGG | - | chr4.2:13660766-13660785 | None:intergenic | 45.0% |
| ! | TGACCCTTTTCATATCCTGC+TGG | - | chr4.2:13663638-13663657 | None:intergenic | 45.0% |
| ! | TTTTGCATTGCTTGGCTCAG+TGG | + | chr4.2:13660936-13660955 | MS.gene08852:CDS | 45.0% |
| !! | AGTTCTCAAAGGTGTCTTGG+AGG | + | chr4.2:13660765-13660784 | MS.gene08852:CDS | 45.0% |
| !! | CTTGCTATTGGAGGTTATCC+TGG | + | chr4.2:13663602-13663621 | MS.gene08852:CDS | 45.0% |
| !! | GAAAGTGTCAATGCCTGCTA+TGG | - | chr4.2:13662175-13662194 | None:intergenic | 45.0% |
| !! | GGGCGTTTTGGTAGATTATG+AGG | + | chr4.2:13661398-13661417 | MS.gene08852:intron | 45.0% |
| !! | TGGTGCTATCATATTGGGGA+AGG | + | chr4.2:13660999-13661018 | MS.gene08852:CDS | 45.0% |
| !!! | ACTAATTTTTTTTTTTAATA+AGG | - | chr4.2:13661424-13661443 | None:intergenic | 5.0% |
| ACATCTGCCAAGCTTCTCAC+TGG | - | chr4.2:13663268-13663287 | None:intergenic | 50.0% | |
| AGCATCACCAGTGAGAAGCT+TGG | + | chr4.2:13663258-13663277 | MS.gene08852:CDS | 50.0% | |
| AGGGCATAAGATGGAGCCAT+CGG | - | chr4.2:13661587-13661606 | None:intergenic | 50.0% | |
| AGGTCTAATGGAGCTCCAAG+TGG | + | chr4.2:13661048-13661067 | MS.gene08852:CDS | 50.0% | |
| CCCTTCAGGTCTTAACTCAG+TGG | + | chr4.2:13661603-13661622 | MS.gene08852:CDS | 50.0% | |
| CCTGCTGGAACAATGATTCC+AGG | - | chr4.2:13663623-13663642 | None:intergenic | 50.0% | |
| CCTGGAATCATTGTTCCAGC+AGG | + | chr4.2:13663620-13663639 | MS.gene08852:CDS | 50.0% | |
| CTAATGGAGCTCCAAGTGGT+TGG | + | chr4.2:13661052-13661071 | MS.gene08852:CDS | 50.0% | |
| GATCCCTGTGGATCAAGTAG+TGG | + | chr4.2:13661508-13661527 | MS.gene08852:CDS | 50.0% | |
| GCTCCAACTTTCTGCTAGAG+AGG | + | chr4.2:13662803-13662822 | MS.gene08852:intron | 50.0% | |
| GGTCCTCTCTAGCAGAAAGT+TGG | - | chr4.2:13662809-13662828 | None:intergenic | 50.0% | |
| GTGGGCATCAAACCAACAGT+TGG | + | chr4.2:13661625-13661644 | MS.gene08852:CDS | 50.0% | |
| TACCTTTCCTTGTCCACCTC+TGG | - | chr4.2:13661082-13661101 | None:intergenic | 50.0% | |
| ! | GCAGGCTCTTTTGCATTGCT+TGG | + | chr4.2:13660928-13660947 | MS.gene08852:CDS | 50.0% |
| ! | GTTGGTCTCACTAGTAGAGC+AGG | + | chr4.2:13661643-13661662 | MS.gene08852:CDS | 50.0% |
| !! | AGAGCATTAGGTGGGCGTTT+TGG | + | chr4.2:13661386-13661405 | MS.gene08852:intron | 50.0% |
| !! | CCCAGTTCTCAAAGGTGTCT+TGG | + | chr4.2:13660762-13660781 | MS.gene08852:CDS | 50.0% |
| !! | GAGAGAAGGGAAAAAGCACC+TGG | + | chr4.2:13660829-13660848 | MS.gene08852:CDS | 50.0% |
| ACCCGACTGTGTCTTGCCTT+GGG | - | chr4.2:13661684-13661703 | None:intergenic | 55.0% | |
| AGCCCAAGGCAAGACACAGT+CGG | + | chr4.2:13661679-13661698 | MS.gene08852:CDS | 55.0% | |
| CATTCACGCGGCCCACTTAT+CGG | - | chr4.2:13661191-13661210 | None:intergenic | 55.0% | |
| GGCTCCATCTTATGCCCTTC+AGG | + | chr4.2:13661589-13661608 | MS.gene08852:CDS | 55.0% | |
| GTGTCTTGCCTTGGGCTGAT+TGG | - | chr4.2:13661676-13661695 | None:intergenic | 55.0% | |
| TACCCGACTGTGTCTTGCCT+TGG | - | chr4.2:13661685-13661704 | None:intergenic | 55.0% | |
| TGCCAGAGGTGGACAAGGAA+AGG | + | chr4.2:13661077-13661096 | MS.gene08852:CDS | 55.0% | |
| ! | GGAAGGCCACTTTGAGTGAG+TGG | + | chr4.2:13661016-13661035 | MS.gene08852:CDS | 55.0% |
| ! | TCAGTGGTGCCAAGAGATGC+AGG | + | chr4.2:13660952-13660971 | MS.gene08852:CDS | 55.0% |
| !! | CAGGCAGAGAGGTGCAGTTT+TGG | + | chr4.2:13663123-13663142 | MS.gene08852:intron | 55.0% |
| CCTCTGGCACTCCAACCACT+TGG | - | chr4.2:13661066-13661085 | None:intergenic | 60.0% | |
| GCCCAAGGCAAGACACAGTC+GGG | + | chr4.2:13661680-13661699 | MS.gene08852:CDS | 60.0% | |
| ! | AGTGGTTGGAGTGCCAGAGG+TGG | + | chr4.2:13661066-13661085 | MS.gene08852:CDS | 60.0% |
| ! | CCAAGTGGTTGGAGTGCCAG+AGG | + | chr4.2:13661063-13661082 | MS.gene08852:CDS | 60.0% |
| ! | TGGAGTGCCAGAGGTGGACA+AGG | + | chr4.2:13661072-13661091 | MS.gene08852:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 13660640 | 13663781 | 13660640 | ID=MS.gene08852 |
| chr4.2 | mRNA | 13660640 | 13663781 | 13660640 | ID=MS.gene08852.t1;Parent=MS.gene08852 |
| chr4.2 | exon | 13660640 | 13661098 | 13660640 | ID=MS.gene08852.t1.exon1;Parent=MS.gene08852.t1 |
| chr4.2 | CDS | 13660640 | 13661098 | 13660640 | ID=cds.MS.gene08852.t1;Parent=MS.gene08852.t1 |
| chr4.2 | exon | 13661490 | 13661701 | 13661490 | ID=MS.gene08852.t1.exon2;Parent=MS.gene08852.t1 |
| chr4.2 | CDS | 13661490 | 13661701 | 13661490 | ID=cds.MS.gene08852.t1;Parent=MS.gene08852.t1 |
| chr4.2 | exon | 13662128 | 13662364 | 13662128 | ID=MS.gene08852.t1.exon3;Parent=MS.gene08852.t1 |
| chr4.2 | CDS | 13662128 | 13662364 | 13662128 | ID=cds.MS.gene08852.t1;Parent=MS.gene08852.t1 |
| chr4.2 | exon | 13663126 | 13663318 | 13663126 | ID=MS.gene08852.t1.exon4;Parent=MS.gene08852.t1 |
| chr4.2 | CDS | 13663126 | 13663318 | 13663126 | ID=cds.MS.gene08852.t1;Parent=MS.gene08852.t1 |
| chr4.2 | exon | 13663419 | 13663781 | 13663419 | ID=MS.gene08852.t1.exon5;Parent=MS.gene08852.t1 |
| chr4.2 | CDS | 13663419 | 13663781 | 13663419 | ID=cds.MS.gene08852.t1;Parent=MS.gene08852.t1 |
| Gene Sequence |
| Protein sequence |
