Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08978.t1 | XP_003629613.1 | 100 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 2.40E-84 | 321.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08978.t1 | Q65WT0 | 88.3 | 145 | 17 | 0 | 1 | 145 | 1 | 145 | 3.4e-79 | 295.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08978.t1 | G7LH30 | 100.0 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 1.7e-84 | 321.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08978 | MS.gene86409 | PPI |
| MS.gene08978 | MS.gene83541 | PPI |
| MS.gene08978 | MS.gene067412 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08978.t1 | MTR_8g083120 | 100.000 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 2.02e-107 | 302 |
| MS.gene08978.t1 | MTR_4g117260 | 96.552 | 145 | 5 | 0 | 1 | 145 | 1 | 145 | 2.37e-104 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08978.t1 | AT4G21110 | 87.586 | 145 | 18 | 0 | 1 | 145 | 1 | 145 | 1.22e-96 | 275 |
| MS.gene08978.t1 | AT4G21110 | 87.586 | 145 | 18 | 0 | 1 | 145 | 1 | 145 | 1.22e-96 | 275 |
Find 42 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAAAATGTGAGACTTTA+TGG | 0.158498 | 4.4:+14908112 | MS.gene08978:CDS |
| TCAATTAACTCCCAGCCTTC+TGG | 0.236033 | 4.4:-14907907 | None:intergenic |
| TTCTCCTCCCTAAGTTGCTT+TGG | 0.329246 | 4.4:-14909846 | None:intergenic |
| ACTCGGTTGGTCTTTACTTT+CGG | 0.333171 | 4.4:-14907877 | None:intergenic |
| ACCGCAATCTAATCGCAAAA+TGG | 0.369378 | 4.4:+14908247 | MS.gene08978:CDS |
| AGAATTGTATGAATTCTGTT+TGG | 0.380714 | 4.4:+14908209 | MS.gene08978:CDS |
| CCGACACTTCGCGAACTTCA+AGG | 0.388371 | 4.4:+14907931 | MS.gene08978:CDS |
| TATGAATTCTGTTTGGATCA+AGG | 0.394850 | 4.4:+14908216 | MS.gene08978:CDS |
| ATGAACGTCTATGTTGCTTA+AGG | 0.422925 | 4.4:+14909772 | MS.gene08978:CDS |
| CAATTAACTCCCAGCCTTCT+GGG | 0.426980 | 4.4:-14907906 | None:intergenic |
| CAAACACATAGCGACTCTTC+TGG | 0.436297 | 4.4:-14908155 | None:intergenic |
| GCAGAGTACCAAAGCAACTT+AGG | 0.437195 | 4.4:+14909838 | MS.gene08978:CDS |
| TTCTGGGTATTTAACTCGGT+TGG | 0.455796 | 4.4:-14907890 | None:intergenic |
| TCGAAATTTCCTTCCTCCGA+TGG | 0.460990 | 4.4:-14908185 | None:intergenic |
| CCTTGAAGTTCGCGAAGTGT+CGG | 0.467406 | 4.4:-14907931 | None:intergenic |
| TTTCCTTCCTCCGATGGTAA+AGG | 0.496872 | 4.4:-14908179 | None:intergenic |
| GAGTTAAATACCCAGAAGGC+TGG | 0.499763 | 4.4:+14907896 | MS.gene08978:CDS |
| AGCCTTCTGGGTATTTAACT+CGG | 0.506523 | 4.4:-14907894 | None:intergenic |
| CAGAGTACCAAAGCAACTTA+GGG | 0.517058 | 4.4:+14909839 | MS.gene08978:CDS |
| TCTAATCGCAAAATGGAAGA+AGG | 0.546868 | 4.4:+14908254 | MS.gene08978:CDS |
| ATGTGTTTGACCTTTACCAT+CGG | 0.556366 | 4.4:+14908169 | MS.gene08978:CDS |
| GTGCGTCCATTGTGGTTGCA+AGG | 0.559549 | 4.4:+14909878 | MS.gene08978:CDS |
| AGTTAAATACCCAGAAGGCT+GGG | 0.562623 | 4.4:+14907897 | MS.gene08978:CDS |
| CAACATAGACGTTCATAACC+AGG | 0.568451 | 4.4:-14909765 | None:intergenic |
| AAAGCAACTTAGGGAGGAGA+AGG | 0.588257 | 4.4:+14909848 | MS.gene08978:CDS |
| GCGAACTTCAAGGAAAGATG+AGG | 0.592435 | 4.4:+14907941 | MS.gene08978:CDS |
| TGACCTTTACCATCGGAGGA+AGG | 0.596413 | 4.4:+14908176 | MS.gene08978:CDS |
| GGTTGCAAGGGATGTGCAAG+TGG | 0.596759 | 4.4:+14909891 | MS.gene08978:CDS |
| CACATCCCTTGCAACCACAA+TGG | 0.602061 | 4.4:-14909884 | None:intergenic |
| GTTATAGAGTGCGTCCATTG+TGG | 0.606111 | 4.4:+14909870 | MS.gene08978:CDS |
| TGCGTCCATTGTGGTTGCAA+GGG | 0.612467 | 4.4:+14909879 | MS.gene08978:CDS |
| TGGTACTCTGCACACACAAG+TGG | 0.614153 | 4.4:-14909826 | None:intergenic |
| GTTGCAAGGGATGTGCAAGT+GGG | 0.621084 | 4.4:+14909892 | MS.gene08978:CDS |
| TACTCTGCACACACAAGTGG+TGG | 0.624405 | 4.4:-14909823 | None:intergenic |
| TTGCAAGGGATGTGCAAGTG+GGG | 0.627037 | 4.4:+14909893 | MS.gene08978:CDS |
| CGAACTTCAAGGAAAGATGA+GGG | 0.628080 | 4.4:+14907942 | MS.gene08978:CDS |
| GCTGAGAATGATCCACATGA+TGG | 0.635653 | 4.4:+14908087 | MS.gene08978:intron |
| TGTTTGACCTTTACCATCGG+AGG | 0.636836 | 4.4:+14908172 | MS.gene08978:CDS |
| CTTCAAGGAAAGATGAGGGA+AGG | 0.644926 | 4.4:+14907946 | MS.gene08978:CDS |
| AGTACCAAAGCAACTTAGGG+AGG | 0.654832 | 4.4:+14909842 | MS.gene08978:CDS |
| AACCGAGTTAAATACCCAGA+AGG | 0.655859 | 4.4:+14907892 | MS.gene08978:CDS |
| GTGGCAAAATTGTGATCGCG+CGG | 0.691573 | 4.4:-14909804 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATAATAGTCATATTA+TGG | - | chr4.4:14909347-14909366 | None:intergenic | 10.0% |
| !!! | AAATTTAATTCTGAAATCTA+TGG | + | chr4.4:14908032-14908051 | MS.gene08978:intron | 15.0% |
| !!! | TTGATTCTAAATATACTTTT+GGG | + | chr4.4:14908409-14908428 | MS.gene08978:intron | 15.0% |
| !! | ATGAGAAAATATCAATTCTT+TGG | + | chr4.4:14909535-14909554 | MS.gene08978:intron | 20.0% |
| !! | TGAGAAAATATCAATTCTTT+GGG | + | chr4.4:14909536-14909555 | MS.gene08978:intron | 20.0% |
| !!! | AACTAGCATATTTAAAACTA+AGG | + | chr4.4:14908772-14908791 | MS.gene08978:intron | 20.0% |
| !!! | AATCATATTTTCAGTTTGAT+AGG | + | chr4.4:14909498-14909517 | MS.gene08978:intron | 20.0% |
| !!! | ACTTTAAAGAATTATTTGAG+CGG | + | chr4.4:14908558-14908577 | MS.gene08978:intron | 20.0% |
| !!! | AGTTTTAAATATGCTAGTTT+TGG | - | chr4.4:14908771-14908790 | None:intergenic | 20.0% |
| !!! | ATACCTCTAATTTAAAACTA+AGG | + | chr4.4:14908714-14908733 | MS.gene08978:intron | 20.0% |
| !!! | ATCATATTTTCAGTTTGATA+GGG | + | chr4.4:14909499-14909518 | MS.gene08978:intron | 20.0% |
| !!! | ATTCCTTAGTTTTAAATTAG+AGG | - | chr4.4:14908720-14908739 | None:intergenic | 20.0% |
| !!! | CTTGATTCTAAATATACTTT+TGG | + | chr4.4:14908408-14908427 | MS.gene08978:intron | 20.0% |
| !!! | GTTTTAAATATGCTAGTTTT+GGG | - | chr4.4:14908770-14908789 | None:intergenic | 20.0% |
| !!! | TTTTAAATATGCTAGTTTTG+GGG | - | chr4.4:14908769-14908788 | None:intergenic | 20.0% |
| ! | AAAGAAAATGTGAGACTTTA+TGG | + | chr4.4:14908112-14908131 | MS.gene08978:CDS | 25.0% |
| ! | AGAATTGTATGAATTCTGTT+TGG | + | chr4.4:14908209-14908228 | MS.gene08978:CDS | 25.0% |
| ! | AGGTAGGTTAATTAACAAAA+GGG | - | chr4.4:14909668-14909687 | None:intergenic | 25.0% |
| ! | AGTAATAATAATAGACAGGT+AGG | - | chr4.4:14909684-14909703 | None:intergenic | 25.0% |
| ! | ATATTTCAATAATTGTTGCC+AGG | - | chr4.4:14909604-14909623 | None:intergenic | 25.0% |
| ! | CATAAATAGTCATTCACAAT+TGG | - | chr4.4:14909286-14909305 | None:intergenic | 25.0% |
| ! | GAAGTTACTATTGCATTATA+AGG | - | chr4.4:14908638-14908657 | None:intergenic | 25.0% |
| ! | GCATAGTAATAATAATAGAC+AGG | - | chr4.4:14909688-14909707 | None:intergenic | 25.0% |
| ! | TTATTATTACTATGCTCTCT+TGG | + | chr4.4:14909693-14909712 | MS.gene08978:intron | 25.0% |
| !! | CTTTAAAGAATTATTTGAGC+GGG | + | chr4.4:14908559-14908578 | MS.gene08978:intron | 25.0% |
| !! | TCATATTTTCAGTTTGATAG+GGG | + | chr4.4:14909500-14909519 | MS.gene08978:intron | 25.0% |
| !! | TGGTGTGCAATTTTAAATAT+AGG | - | chr4.4:14908138-14908157 | None:intergenic | 25.0% |
| !!! | CAAAAGTACTTTCACATAAA+AGG | - | chr4.4:14908294-14908313 | None:intergenic | 25.0% |
| AATTAACAAAAGGGAAGATG+AGG | - | chr4.4:14909659-14909678 | None:intergenic | 30.0% | |
| AGTGAAGCTTAAGAAAGTTA+AGG | - | chr4.4:14909087-14909106 | None:intergenic | 30.0% | |
| ATTAACAAAAGGGAAGATGA+GGG | - | chr4.4:14909658-14909677 | None:intergenic | 30.0% | |
| CAGGTAGGTTAATTAACAAA+AGG | - | chr4.4:14909669-14909688 | None:intergenic | 30.0% | |
| CATTATAAGGTGACTTCTTA+TGG | - | chr4.4:14908625-14908644 | None:intergenic | 30.0% | |
| TAACTGTGTATTCATCATAG+TGG | + | chr4.4:14909412-14909431 | MS.gene08978:intron | 30.0% | |
| TATGAATTCTGTTTGGATCA+AGG | + | chr4.4:14908216-14908235 | MS.gene08978:CDS | 30.0% | |
| TCATAGAAGTAAGTTTGACT+AGG | + | chr4.4:14908332-14908351 | MS.gene08978:intron | 30.0% | |
| TGAAGCCAAAAATTATGCTT+CGG | + | chr4.4:14908934-14908953 | MS.gene08978:intron | 30.0% | |
| TTCTTATGGAACAACGTTTA+AGG | - | chr4.4:14908611-14908630 | None:intergenic | 30.0% | |
| TTGTTTCAAAGATTCGAAGT+TGG | - | chr4.4:14909140-14909159 | None:intergenic | 30.0% | |
| TTTAAGTATGCGTTAGTTGT+GGG | + | chr4.4:14909316-14909335 | MS.gene08978:intron | 30.0% | |
| ! | CAATTTTATAGTTCACTTGC+TGG | + | chr4.4:14909157-14909176 | MS.gene08978:intron | 30.0% |
| ! | CATTTTCTTTTTCCATCATG+TGG | - | chr4.4:14908102-14908121 | None:intergenic | 30.0% |
| !! | TGATCTACATTTTAGTCTCT+TGG | + | chr4.4:14909023-14909042 | MS.gene08978:intron | 30.0% |
| !! | TTTTAAGTATGCGTTAGTTG+TGG | + | chr4.4:14909315-14909334 | MS.gene08978:intron | 30.0% |
| !!! | AAGCATAATTTTTGGCTTCA+CGG | - | chr4.4:14908934-14908953 | None:intergenic | 30.0% |
| !!! | TTACATTGTGTGCTAGTTTT+GGG | - | chr4.4:14908828-14908847 | None:intergenic | 30.0% |
| !!! | TTTGTTTTTAAACTACAGCC+TGG | + | chr4.4:14909747-14909766 | MS.gene08978:intron | 30.0% |
| AAGATTCGAAGTTGGAATAC+TGG | - | chr4.4:14909132-14909151 | None:intergenic | 35.0% | |
| ATGATTCTTCGATCGTATTG+AGG | - | chr4.4:14909484-14909503 | None:intergenic | 35.0% | |
| ATGTGTTTGACCTTTACCAT+CGG | + | chr4.4:14908169-14908188 | MS.gene08978:CDS | 35.0% | |
| CTATGACCTCATAACATCTT+AGG | - | chr4.4:14909575-14909594 | None:intergenic | 35.0% | |
| CTATTGACAGAACAGAAACA+AGG | - | chr4.4:14908526-14908545 | None:intergenic | 35.0% | |
| GAAGCCAAAAATTATGCTTC+GGG | + | chr4.4:14908935-14908954 | MS.gene08978:intron | 35.0% | |
| GAAGCTTAAGAAAGTTAAGG+AGG | - | chr4.4:14909084-14909103 | None:intergenic | 35.0% | |
| TAGAAGTAAGTTTGACTAGG+AGG | + | chr4.4:14908335-14908354 | MS.gene08978:intron | 35.0% | |
| TCTAATCGCAAAATGGAAGA+AGG | + | chr4.4:14908254-14908273 | MS.gene08978:CDS | 35.0% | |
| TGATTCTTCGATCGTATTGA+GGG | - | chr4.4:14909483-14909502 | None:intergenic | 35.0% | |
| TGGAAATGAACAGTATGTGT+TGG | + | chr4.4:14909043-14909062 | MS.gene08978:intron | 35.0% | |
| TGTAGATCATACACAACACT+CGG | - | chr4.4:14909012-14909031 | None:intergenic | 35.0% | |
| ! | ACTTGTCCAAAGTATGGTTT+TGG | + | chr4.4:14908977-14908996 | MS.gene08978:intron | 35.0% |
| ! | ATGAACGTCTATGTTGCTTA+AGG | + | chr4.4:14909772-14909791 | MS.gene08978:CDS | 35.0% |
| ! | ATGAGGTCATAGTTATTTCC+TGG | + | chr4.4:14909583-14909602 | MS.gene08978:intron | 35.0% |
| ! | ATTACAGTCGGTTTCGTATT+TGG | - | chr4.4:14908373-14908392 | None:intergenic | 35.0% |
| ! | CTTGTCCAAAGTATGGTTTT+GGG | + | chr4.4:14908978-14908997 | MS.gene08978:intron | 35.0% |
| ! | GCTTTTCCTAAGATGTTATG+AGG | + | chr4.4:14909566-14909585 | MS.gene08978:intron | 35.0% |
| ! | TCCATTTTGCGATTAGATTG+CGG | - | chr4.4:14908251-14908270 | None:intergenic | 35.0% |
| ! | TCTGTAACTTGTCCAAAGTA+TGG | + | chr4.4:14908971-14908990 | MS.gene08978:intron | 35.0% |
| ! | TTTGCCCGAAGCATAATTTT+TGG | - | chr4.4:14908942-14908961 | None:intergenic | 35.0% |
| !! | AAGGATTATTAGAGAGCACT+AGG | - | chr4.4:14908592-14908611 | None:intergenic | 35.0% |
| !! | ACAAGTCAGAAGTACTAAGA+TGG | - | chr4.4:14908889-14908908 | None:intergenic | 35.0% |
| !! | GTTACATTGTGTGCTAGTTT+TGG | - | chr4.4:14908829-14908848 | None:intergenic | 35.0% |
| !! | TTGTCCAAAGTATGGTTTTG+GGG | + | chr4.4:14908979-14908998 | MS.gene08978:intron | 35.0% |
| !!! | TACATTGTGTGCTAGTTTTG+GGG | - | chr4.4:14908827-14908846 | None:intergenic | 35.0% |
| AACCGAGTTAAATACCCAGA+AGG | + | chr4.4:14907892-14907911 | MS.gene08978:CDS | 40.0% | |
| AAGCACCATCATGATAGACT+AGG | + | chr4.4:14909212-14909231 | MS.gene08978:intron | 40.0% | |
| ACCGCAATCTAATCGCAAAA+TGG | + | chr4.4:14908247-14908266 | MS.gene08978:CDS | 40.0% | |
| ACCTCTTCCTTCATTACAGT+CGG | - | chr4.4:14908385-14908404 | None:intergenic | 40.0% | |
| AGCCTTCTGGGTATTTAACT+CGG | - | chr4.4:14907897-14907916 | None:intergenic | 40.0% | |
| AGTTAAATACCCAGAAGGCT+GGG | + | chr4.4:14907897-14907916 | MS.gene08978:CDS | 40.0% | |
| ATCATACACAACACTCGGTT+CGG | - | chr4.4:14909007-14909026 | None:intergenic | 40.0% | |
| CAACATAGACGTTCATAACC+AGG | - | chr4.4:14909768-14909787 | None:intergenic | 40.0% | |
| CACGGTATGTTAGGTTTGTA+GGG | - | chr4.4:14908660-14908679 | None:intergenic | 40.0% | |
| CAGAACAGAAACAAGGAGAT+TGG | - | chr4.4:14908519-14908538 | None:intergenic | 40.0% | |
| CATTCACAATTGGAGCAGTT+GGG | - | chr4.4:14909276-14909295 | None:intergenic | 40.0% | |
| CGAACTTCAAGGAAAGATGA+GGG | + | chr4.4:14907942-14907961 | MS.gene08978:CDS | 40.0% | |
| GATTCTTCGATCGTATTGAG+GGG | - | chr4.4:14909482-14909501 | None:intergenic | 40.0% | |
| TACGAAACCGACTGTAATGA+AGG | + | chr4.4:14908375-14908394 | MS.gene08978:intron | 40.0% | |
| TCAGTTTGATAGGGGTCTAA+TGG | + | chr4.4:14909508-14909527 | MS.gene08978:intron | 40.0% | |
| TCATTCACAATTGGAGCAGT+TGG | - | chr4.4:14909277-14909296 | None:intergenic | 40.0% | |
| TGTTGCCTAGTCTATCATGA+TGG | - | chr4.4:14909220-14909239 | None:intergenic | 40.0% | |
| TTCTGGGTATTTAACTCGGT+TGG | - | chr4.4:14907893-14907912 | None:intergenic | 40.0% | |
| TTGGACAAGTTACAGATGAC+AGG | - | chr4.4:14908967-14908986 | None:intergenic | 40.0% | |
| ! | CAGAGTACCAAAGCAACTTA+GGG | + | chr4.4:14909839-14909858 | MS.gene08978:CDS | 40.0% |
| ! | TGAACAGTATGTGTTGGTCT+TGG | + | chr4.4:14909049-14909068 | MS.gene08978:intron | 40.0% |
| !! | ACTCGGTTGGTCTTTACTTT+CGG | - | chr4.4:14907880-14907899 | None:intergenic | 40.0% |
| !!! | AGTTTTGGGGTAAACTATGG+TGG | - | chr4.4:14908756-14908775 | None:intergenic | 40.0% |
| !!! | GCTAGTTTTGGGGTAAACTA+TGG | - | chr4.4:14908759-14908778 | None:intergenic | 40.0% |
| AAAGCAACTTAGGGAGGAGA+AGG | + | chr4.4:14909848-14909867 | MS.gene08978:CDS | 45.0% | |
| AACAAAAGGGAAGATGAGGG+TGG | - | chr4.4:14909655-14909674 | None:intergenic | 45.0% | |
| AAGGAAAGATGAGGGAAGGT+TGG | + | chr4.4:14907950-14907969 | MS.gene08978:intron | 45.0% | |
| AAGTATGCGTTAGTTGTGGG+TGG | + | chr4.4:14909319-14909338 | MS.gene08978:intron | 45.0% | |
| AAGTTGGAATACTGGAGACC+TGG | - | chr4.4:14909124-14909143 | None:intergenic | 45.0% | |
| ACAATGTAACTCCTCGCAAC+AGG | + | chr4.4:14908839-14908858 | MS.gene08978:intron | 45.0% | |
| ACCGACTGTAATGAAGGAAG+AGG | + | chr4.4:14908381-14908400 | MS.gene08978:intron | 45.0% | |
| AGTACCAAAGCAACTTAGGG+AGG | + | chr4.4:14909842-14909861 | MS.gene08978:CDS | 45.0% | |
| AGTTGGAATACTGGAGACCT+GGG | - | chr4.4:14909123-14909142 | None:intergenic | 45.0% | |
| CAAACACATAGCGACTCTTC+TGG | - | chr4.4:14908158-14908177 | None:intergenic | 45.0% | |
| CAATTAACTCCCAGCCTTCT+GGG | - | chr4.4:14907909-14907928 | None:intergenic | 45.0% | |
| CATTGTTGAGCAGAACTGCA+CGG | - | chr4.4:14908678-14908697 | None:intergenic | 45.0% | |
| CTTCAAGGAAAGATGAGGGA+AGG | + | chr4.4:14907946-14907965 | MS.gene08978:CDS | 45.0% | |
| GAGTTAAATACCCAGAAGGC+TGG | + | chr4.4:14907896-14907915 | MS.gene08978:CDS | 45.0% | |
| GCACGGTATGTTAGGTTTGT+AGG | - | chr4.4:14908661-14908680 | None:intergenic | 45.0% | |
| GCGAACTTCAAGGAAAGATG+AGG | + | chr4.4:14907941-14907960 | MS.gene08978:CDS | 45.0% | |
| GCTGAGAATGATCCACATGA+TGG | + | chr4.4:14908087-14908106 | MS.gene08978:intron | 45.0% | |
| GGAACCCCAAAACCATACTT+TGG | - | chr4.4:14908986-14909005 | None:intergenic | 45.0% | |
| GTGTGTCTTTCACAGTCCTA+AGG | - | chr4.4:14908483-14908502 | None:intergenic | 45.0% | |
| GTTATAGAGTGCGTCCATTG+TGG | + | chr4.4:14909870-14909889 | MS.gene08978:CDS | 45.0% | |
| TCAATTAACTCCCAGCCTTC+TGG | - | chr4.4:14907910-14907929 | None:intergenic | 45.0% | |
| TCGAAATTTCCTTCCTCCGA+TGG | - | chr4.4:14908188-14908207 | None:intergenic | 45.0% | |
| TGTTTGACCTTTACCATCGG+AGG | + | chr4.4:14908172-14908191 | MS.gene08978:CDS | 45.0% | |
| TTCTCCTCCCTAAGTTGCTT+TGG | - | chr4.4:14909849-14909868 | None:intergenic | 45.0% | |
| TTTCCTTCCTCCGATGGTAA+AGG | - | chr4.4:14908182-14908201 | None:intergenic | 45.0% | |
| ! | GCAGAGTACCAAAGCAACTT+AGG | + | chr4.4:14909838-14909857 | MS.gene08978:CDS | 45.0% |
| ACAGTCCTAAGGTGTGTGTG+TGG | - | chr4.4:14908472-14908491 | None:intergenic | 50.0% | |
| CACATCCCTTGCAACCACAA+TGG | - | chr4.4:14909887-14909906 | None:intergenic | 50.0% | |
| CCTTGAAGTTCGCGAAGTGT+CGG | - | chr4.4:14907934-14907953 | None:intergenic | 50.0% | |
| CGTGCAGTTCTGCTCAACAA+TGG | + | chr4.4:14908676-14908695 | MS.gene08978:intron | 50.0% | |
| GCAGAACTGCACGGTATGTT+AGG | - | chr4.4:14908669-14908688 | None:intergenic | 50.0% | |
| GTGGCAAAATTGTGATCGCG+CGG | - | chr4.4:14909807-14909826 | None:intergenic | 50.0% | |
| GTTGCAAGGGATGTGCAAGT+GGG | + | chr4.4:14909892-14909911 | MS.gene08978:CDS | 50.0% | |
| GTTGGAATACTGGAGACCTG+GGG | - | chr4.4:14909122-14909141 | None:intergenic | 50.0% | |
| TACTCTGCACACACAAGTGG+TGG | - | chr4.4:14909826-14909845 | None:intergenic | 50.0% | |
| TCCAACCACACACACACCTT+AGG | + | chr4.4:14908464-14908483 | MS.gene08978:intron | 50.0% | |
| TCCTAAGGTGTGTGTGTGGT+TGG | - | chr4.4:14908468-14908487 | None:intergenic | 50.0% | |
| TGACCTTTACCATCGGAGGA+AGG | + | chr4.4:14908176-14908195 | MS.gene08978:CDS | 50.0% | |
| TGATTACTGCTCCTGTTGCG+AGG | - | chr4.4:14908853-14908872 | None:intergenic | 50.0% | |
| TGCGTCCATTGTGGTTGCAA+GGG | + | chr4.4:14909879-14909898 | MS.gene08978:CDS | 50.0% | |
| TGGTACTCTGCACACACAAG+TGG | - | chr4.4:14909829-14909848 | None:intergenic | 50.0% | |
| TTGCAAGGGATGTGCAAGTG+GGG | + | chr4.4:14909893-14909912 | MS.gene08978:CDS | 50.0% | |
| ATACTGGAGACCTGGGGTTG+TGG | - | chr4.4:14909116-14909135 | None:intergenic | 55.0% | |
| CACTAGATTCCCACAACCCC+AGG | + | chr4.4:14909103-14909122 | MS.gene08978:intron | 55.0% | |
| CCGACACTTCGCGAACTTCA+AGG | + | chr4.4:14907931-14907950 | MS.gene08978:CDS | 55.0% | |
| GGTTGCAAGGGATGTGCAAG+TGG | + | chr4.4:14909891-14909910 | MS.gene08978:CDS | 55.0% | |
| GTGCGTCCATTGTGGTTGCA+AGG | + | chr4.4:14909878-14909897 | MS.gene08978:CDS | 55.0% | |
| TACTGGAGACCTGGGGTTGT+GGG | - | chr4.4:14909115-14909134 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 14907874 | 14909920 | 14907874 | ID=MS.gene08978 |
| chr4.4 | mRNA | 14907874 | 14909920 | 14907874 | ID=MS.gene08978.t1;Parent=MS.gene08978 |
| chr4.4 | exon | 14907874 | 14907967 | 14907874 | ID=MS.gene08978.t1.exon1;Parent=MS.gene08978.t1 |
| chr4.4 | CDS | 14907874 | 14907967 | 14907874 | ID=cds.MS.gene08978.t1;Parent=MS.gene08978.t1 |
| chr4.4 | exon | 14908088 | 14908275 | 14908088 | ID=MS.gene08978.t1.exon2;Parent=MS.gene08978.t1 |
| chr4.4 | CDS | 14908088 | 14908275 | 14908088 | ID=cds.MS.gene08978.t1;Parent=MS.gene08978.t1 |
| chr4.4 | exon | 14909765 | 14909920 | 14909765 | ID=MS.gene08978.t1.exon3;Parent=MS.gene08978.t1 |
| chr4.4 | CDS | 14909765 | 14909920 | 14909765 | ID=cds.MS.gene08978.t1;Parent=MS.gene08978.t1 |
| Gene Sequence |
| Protein sequence |
