Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08995.t1 | XP_013446614.1 | 93.3 | 955 | 57 | 3 | 1 | 953 | 1 | 950 | 0.00E+00 | 1688.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08995.t1 | A0A072TTW9 | 93.3 | 955 | 57 | 3 | 1 | 953 | 1 | 950 | 0.0e+00 | 1688.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene08995.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene08995 | 0.821376 | 4.17E-53 | -1.69E-46 |
| MS.gene049697 | MS.gene08995 | 0.813217 | 2.86E-51 | -1.69E-46 |
| MS.gene051248 | MS.gene08995 | 0.825554 | 4.40E-54 | -1.69E-46 |
| MS.gene056228 | MS.gene08995 | 0.857756 | 1.31E-62 | -1.69E-46 |
| MS.gene059154 | MS.gene08995 | 0.807492 | 4.92E-50 | -1.69E-46 |
| MS.gene059300 | MS.gene08995 | 0.804189 | 2.43E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08995.t1 | MTR_8g081010 | 93.298 | 955 | 57 | 3 | 1 | 953 | 1 | 950 | 0.0 | 1776 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08995.t1 | AT4G14200 | 39.474 | 152 | 80 | 7 | 802 | 948 | 639 | 783 | 7.17e-17 | 86.3 |
| MS.gene08995.t1 | AT4G14200 | 40.678 | 118 | 53 | 4 | 1 | 104 | 1 | 115 | 1.09e-14 | 79.3 |
Find 181 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATCTGAACCATTGAAAT+TGG | 0.207181 | 4.4:-15067253 | None:intergenic |
| AATTGAAGAGCAGACCATTT+TGG | 0.229250 | 4.4:+15071271 | MS.gene08995:CDS |
| AGCAATCAAGTGAGTTATTT+AGG | 0.233180 | 4.4:+15069984 | MS.gene08995:CDS |
| CACACCTCTCAAGAGTCTTT+TGG | 0.235302 | 4.4:+15071059 | MS.gene08995:CDS |
| TGAGCCTCGTTCGTGATTAT+TGG | 0.239007 | 4.4:-15069320 | None:intergenic |
| TCTGCAATTGAGCTTGTTAA+TGG | 0.247434 | 4.4:-15068897 | None:intergenic |
| TCTGCTCTGGTTTGTTATCT+TGG | 0.248157 | 4.4:-15071025 | None:intergenic |
| ACAACTGTTAACTCAATTCT+TGG | 0.264032 | 4.4:+15071147 | MS.gene08995:CDS |
| CTTCTTGAGGAAATTCATAC+TGG | 0.270881 | 4.4:-15069289 | None:intergenic |
| TTGGAAGGCAACTGGGGTTC+TGG | 0.273219 | 4.4:+15070571 | MS.gene08995:CDS |
| GTTTCAGAAGTGGCGCCTTT+AGG | 0.278629 | 4.4:-15070895 | None:intergenic |
| TCAACCTGAAAGTAGTTTAA+TGG | 0.282089 | 4.4:+15069763 | MS.gene08995:CDS |
| GGCAACTGGGGTTCTGGTTC+AGG | 0.286704 | 4.4:+15070577 | MS.gene08995:CDS |
| GAGACCATTAAACTACTTTC+AGG | 0.293411 | 4.4:-15069767 | None:intergenic |
| TCATCAGGTCCATGCTCTTC+AGG | 0.294935 | 4.4:-15069725 | None:intergenic |
| TTCTTCTTTGTAACCTTCAA+TGG | 0.299986 | 4.4:-15067226 | None:intergenic |
| TTGGTTAAACTTGGTTCATC+TGG | 0.315047 | 4.4:+15070277 | MS.gene08995:CDS |
| AGATTGCTCTGAAGTTTCTT+TGG | 0.316918 | 4.4:+15069622 | MS.gene08995:CDS |
| AGTGATGATGCTGGTGAAAA+TGG | 0.319856 | 4.4:+15070013 | MS.gene08995:CDS |
| CACATTCTTCTATATATTCC+GGG | 0.326461 | 4.4:+15070386 | MS.gene08995:CDS |
| ATAGAAGAAAATAATGGTTC+TGG | 0.341669 | 4.4:+15071120 | MS.gene08995:CDS |
| CACCACTTCTTTCACTCAAC+TGG | 0.342727 | 4.4:-15069538 | None:intergenic |
| TGCTGAGCTTTCTGCTGAAC+CGG | 0.343047 | 4.4:+15070195 | MS.gene08995:CDS |
| TCACATTCTTCTATATATTC+CGG | 0.344140 | 4.4:+15070385 | MS.gene08995:CDS |
| CGTAATAACTTGGTTAAACT+TGG | 0.353416 | 4.4:+15070268 | MS.gene08995:CDS |
| TTAGCACTGGGATGTGGATT+TGG | 0.364827 | 4.4:-15067171 | None:intergenic |
| TTGATAACCTGATTTAAAGT+TGG | 0.365804 | 4.4:-15070964 | None:intergenic |
| ATATTTGCAGGATATCTTGC+TGG | 0.373211 | 4.4:-15071231 | None:intergenic |
| GTGACAGTTTGGAAGGCAAC+TGG | 0.374572 | 4.4:+15070563 | MS.gene08995:CDS |
| TTGGTTCCCAACTTTAAATC+AGG | 0.378256 | 4.4:+15070957 | MS.gene08995:CDS |
| CTCTTCAGAGATGCATGTTA+TGG | 0.379248 | 4.4:+15069565 | MS.gene08995:CDS |
| TGATAACCTGATTTAAAGTT+GGG | 0.381863 | 4.4:-15070963 | None:intergenic |
| CAAGTTTAACCAAGTTATTA+CGG | 0.395077 | 4.4:-15070267 | None:intergenic |
| AGTACCTGGAGTGTGAGTTT+TGG | 0.401290 | 4.4:-15066895 | None:intergenic |
| AAACTTGATGCAGCTTATCC+TGG | 0.401313 | 4.4:+15069452 | MS.gene08995:CDS |
| TGCTGACTCGCACGAAGAAC+AGG | 0.402380 | 4.4:+15070105 | MS.gene08995:CDS |
| TCTGCTGTTGAAGATAATTC+AGG | 0.412258 | 4.4:+15070427 | MS.gene08995:CDS |
| TTACGGCTTTGATCTTGAAC+AGG | 0.414539 | 4.4:-15070250 | None:intergenic |
| CAAACCAACTGTATCCAAAA+TGG | 0.416729 | 4.4:-15071285 | None:intergenic |
| GCCGTTGAAGATGATTCAAT+TGG | 0.419479 | 4.4:+15070223 | MS.gene08995:CDS |
| TGTGCTCTTTACTTCTGCTC+TGG | 0.421478 | 4.4:-15071038 | None:intergenic |
| TCATCTTCAACGGCGGAATC+CGG | 0.421521 | 4.4:-15070214 | None:intergenic |
| TTCTGTCGATGCCAGCGAAC+CGG | 0.422453 | 4.4:-15070749 | None:intergenic |
| AAAAGACAGGGTTGAAATCA+TGG | 0.423875 | 4.4:+15069121 | MS.gene08995:CDS |
| TCTGTAGTTGGAAAGGTTGC+AGG | 0.429209 | 4.4:+15069884 | MS.gene08995:CDS |
| TCTCAGCAGGTGCAGCTTGT+CGG | 0.429317 | 4.4:-15070795 | None:intergenic |
| TATCAAATATCGCATGAAAT+CGG | 0.433804 | 4.4:+15069665 | MS.gene08995:CDS |
| GAACTTTCATGAATTTCATC+AGG | 0.435012 | 4.4:-15069740 | None:intergenic |
| TGGTAGCCGGCGTGACAGTT+TGG | 0.437403 | 4.4:+15070552 | MS.gene08995:CDS |
| CTTTGATCATCAACCGGCAT+TGG | 0.437615 | 4.4:-15070475 | None:intergenic |
| GGTGATTTCGGCTTGTTGCT+AGG | 0.438775 | 4.4:-15071093 | None:intergenic |
| CATCGCCCATGTCATGATCC+AGG | 0.443193 | 4.4:-15069214 | None:intergenic |
| GAAGAACAAACCAATTTCAA+TGG | 0.450290 | 4.4:+15067243 | MS.gene08995:CDS |
| CCAGACAGCTGTCTCTCAGC+AGG | 0.450792 | 4.4:-15070808 | None:intergenic |
| GATGTGAGTCCACTTATTGC+TGG | 0.452483 | 4.4:+15068765 | MS.gene08995:CDS |
| AACAATGACAAGGGTAATGA+TGG | 0.452738 | 4.4:+15067454 | MS.gene08995:CDS |
| CATACTGGGGCAGCAAAGAA+AGG | 0.454900 | 4.4:-15069274 | None:intergenic |
| AGATCAAAGCCGTAATAACT+TGG | 0.457575 | 4.4:+15070258 | MS.gene08995:CDS |
| GTGGAAACTTTACCATCAAC+CGG | 0.458357 | 4.4:+15070730 | MS.gene08995:CDS |
| TTATTGCTTTGATCATCAAC+CGG | 0.463154 | 4.4:-15070481 | None:intergenic |
| CCTGCTGAGAGACAGCTGTC+TGG | 0.465983 | 4.4:+15070808 | MS.gene08995:CDS |
| AAGATCTGTGGAACCATTGA+AGG | 0.466676 | 4.4:+15067213 | MS.gene08995:CDS |
| AATAATCACGAACGAGGCTC+AGG | 0.471738 | 4.4:+15069322 | MS.gene08995:CDS |
| TCAACTGAAACATCAGTTCC+AGG | 0.471862 | 4.4:-15070526 | None:intergenic |
| TTCAGAGGGAGGCATCCTTT+CGG | 0.472376 | 4.4:+15069801 | MS.gene08995:CDS |
| CCGAAGGAAAAGAAGGAACC+TGG | 0.472419 | 4.4:+15069248 | MS.gene08995:CDS |
| TCGCTGGCATCGACAGAAGC+AGG | 0.479023 | 4.4:+15070754 | MS.gene08995:CDS |
| CTATGTTTAGCACTGGGATG+TGG | 0.480805 | 4.4:-15067177 | None:intergenic |
| GAGTCAACTGATAACGTTGT+AGG | 0.484509 | 4.4:+15069143 | MS.gene08995:CDS |
| GATGCCAGCGAACCGGTTGA+TGG | 0.485197 | 4.4:-15070742 | None:intergenic |
| AAATGTGACAGATTGTAGTT+TGG | 0.486137 | 4.4:+15069046 | MS.gene08995:CDS |
| AGCACGTCTATGTTTAGCAC+TGG | 0.486588 | 4.4:-15067184 | None:intergenic |
| TTGCTTGAGCCAGCAATAAG+TGG | 0.486808 | 4.4:-15068774 | None:intergenic |
| ATAAACGATGCATCTGTAGT+TGG | 0.487241 | 4.4:+15069872 | MS.gene08995:CDS |
| TTATCATCATGCACAGGAAG+TGG | 0.488438 | 4.4:-15069431 | None:intergenic |
| TGTTTCAATGACACGCTCCC+AGG | 0.489066 | 4.4:-15069470 | None:intergenic |
| TAGTTTGGTGTGTGATGAAA+AGG | 0.493906 | 4.4:+15069061 | MS.gene08995:CDS |
| TTTACCATCAACCGGTTCGC+TGG | 0.495747 | 4.4:+15070738 | MS.gene08995:CDS |
| CTGGGATGTGGATTTGGAAA+AGG | 0.498306 | 4.4:-15067165 | None:intergenic |
| AAGAAAAGGCTGCAAATGAA+TGG | 0.500017 | 4.4:+15071202 | MS.gene08995:CDS |
| TTCACCACTTGAGTCGCTGA+AGG | 0.507100 | 4.4:-15071180 | None:intergenic |
| TCAACCAATGTTGTGAAAGA+TGG | 0.508206 | 4.4:-15070853 | None:intergenic |
| TCGAGCATTGTGCATGGCGA+TGG | 0.514932 | 4.4:+15068936 | MS.gene08995:CDS |
| TTCTGGCAATAAATTGGGCA+TGG | 0.515055 | 4.4:-15069003 | None:intergenic |
| TTTCAGTTGACTCTGGTAGC+CGG | 0.515926 | 4.4:+15070539 | MS.gene08995:CDS |
| CTGGATCATGACATGGGCGA+TGG | 0.517009 | 4.4:+15069215 | MS.gene08995:CDS |
| AGCCACGTGGCTAGTCCTAA+AGG | 0.521301 | 4.4:+15070880 | MS.gene08995:CDS |
| TTCTTGAGGAAATTCATACT+GGG | 0.527999 | 4.4:-15069288 | None:intergenic |
| ATTGGCGAGTTTACTTCTTG+AGG | 0.530675 | 4.4:-15069302 | None:intergenic |
| TGCTGACTCACATGAAGCAC+GGG | 0.531804 | 4.4:+15070312 | MS.gene08995:CDS |
| GAAAAGGAGCTTAATTTGAA+AGG | 0.533754 | 4.4:+15069077 | MS.gene08995:CDS |
| AACTTGATGCAGCTTATCCT+GGG | 0.536306 | 4.4:+15069453 | MS.gene08995:CDS |
| CGATGCATCTGTAGTTGGAA+AGG | 0.537909 | 4.4:+15069877 | MS.gene08995:CDS |
| TGACAGTTTGGAAGGCAACT+GGG | 0.539280 | 4.4:+15070564 | MS.gene08995:CDS |
| CCTTGACTTAGTCCACTATC+CGG | 0.539328 | 4.4:-15067538 | None:intergenic |
| TGTTAATCCGAAGGAAAAGA+AGG | 0.543340 | 4.4:+15069241 | MS.gene08995:CDS |
| GACTCAAGTGGTGAAAGAAA+AGG | 0.544512 | 4.4:+15071188 | MS.gene08995:CDS |
| TTAGGACTAGCCACGTGGCT+AGG | 0.544783 | 4.4:-15070877 | None:intergenic |
| AGTTACTGCTGTGCCAATGC+CGG | 0.545045 | 4.4:+15070462 | MS.gene08995:CDS |
| TTGACTAAATTAACTCCACC+TGG | 0.545904 | 4.4:+15070508 | MS.gene08995:CDS |
| TTTGAAGTGGGAAATATAGG+TGG | 0.546310 | 4.4:+15068840 | MS.gene08995:CDS |
| AGTTAACGAAGCAATTTCCC+TGG | 0.547977 | 4.4:+15069196 | MS.gene08995:CDS |
| GCTGCCATCTTTCACAACAT+TGG | 0.550986 | 4.4:+15070849 | MS.gene08995:CDS |
| TGAGTCGCTGAAGGGGACTC+AGG | 0.552611 | 4.4:-15071171 | None:intergenic |
| ACTGATGTTTCAGTTGACTC+TGG | 0.556029 | 4.4:+15070532 | MS.gene08995:CDS |
| TCAAATTCCACCTCACCAGC+TGG | 0.556490 | 4.4:+15070934 | MS.gene08995:CDS |
| GGGACGCAAAGTCAATTGCC+AGG | 0.557599 | 4.4:+15068861 | MS.gene08995:CDS |
| TACTACTTGTAATGAAGTCG+AGG | 0.558553 | 4.4:+15069370 | MS.gene08995:CDS |
| AAAGTTGGGAACCAACCAGC+TGG | 0.559198 | 4.4:-15070949 | None:intergenic |
| AATGGATCCACAGTAGAGCC+TGG | 0.560545 | 4.4:-15068879 | None:intergenic |
| TCACCACTTGAGTCGCTGAA+GGG | 0.563624 | 4.4:-15071179 | None:intergenic |
| TTGAAGTGGGAAATATAGGT+GGG | 0.565529 | 4.4:+15068841 | MS.gene08995:CDS |
| CTGCTGACTCACATGAAGCA+CGG | 0.565776 | 4.4:+15070311 | MS.gene08995:CDS |
| GTGATGTATACTTGCTGGCA+AGG | 0.567164 | 4.4:-15070366 | None:intergenic |
| AGAATGTGATGTATACTTGC+TGG | 0.568221 | 4.4:-15070371 | None:intergenic |
| GCTCAACTTCTGATTGCAAG+TGG | 0.572874 | 4.4:-15069964 | None:intergenic |
| AAAGGTTGCAGGAGCAGATG+TGG | 0.573435 | 4.4:+15069895 | MS.gene08995:CDS |
| AGCCGGCGTGACAGTTTGGA+AGG | 0.574071 | 4.4:+15070556 | MS.gene08995:CDS |
| ATACTGGGGCAGCAAAGAAA+GGG | 0.576595 | 4.4:-15069273 | None:intergenic |
| ATCATGTCGAGCAGAAGCCC+CGG | 0.577061 | 4.4:-15070404 | None:intergenic |
| AGGAATAATAGTGATGATGC+TGG | 0.577648 | 4.4:+15070004 | MS.gene08995:CDS |
| GGCAGCAAAGAAAGGGACCC+AGG | 0.578050 | 4.4:-15069266 | None:intergenic |
| ATTTAGTAGATCAGAAAGTG+AGG | 0.578447 | 4.4:+15067489 | MS.gene08995:CDS |
| CACCACTTGAGTCGCTGAAG+GGG | 0.579229 | 4.4:-15071178 | None:intergenic |
| ATGTGTGTCACAAATGTGGT+TGG | 0.583107 | 4.4:+15067142 | MS.gene08995:CDS |
| TCCAATTGAATCATCTTCAA+CGG | 0.583206 | 4.4:-15070224 | None:intergenic |
| TGGGAACCAACCAGCTGGTG+AGG | 0.584169 | 4.4:-15070944 | None:intergenic |
| TTCATCAGTCGCAGACCGAA+AGG | 0.585441 | 4.4:-15069816 | None:intergenic |
| GAAGAGAATAAGAAACCGAC+TGG | 0.585709 | 4.4:+15070076 | MS.gene08995:CDS |
| CAAGAACATAATTTGAACTC+AGG | 0.586642 | 4.4:+15067580 | MS.gene08995:CDS |
| CCGGATAGTGGACTAAGTCA+AGG | 0.586744 | 4.4:+15067538 | MS.gene08995:CDS |
| AATTTCCCTGGATCATGACA+TGG | 0.586997 | 4.4:+15069208 | MS.gene08995:CDS |
| GTTGGTTTGTTGCACAACAG+TGG | 0.595090 | 4.4:+15071299 | MS.gene08995:CDS |
| ATTCCACCTCACCAGCTGGT+TGG | 0.595331 | 4.4:+15070938 | MS.gene08995:CDS |
| GATATCCTGCAAATATCAAG+AGG | 0.596718 | 4.4:+15071238 | MS.gene08995:CDS |
| GGATGAACAGCTATCAGTGA+AGG | 0.597595 | 4.4:+15070126 | MS.gene08995:CDS |
| ATCAGTAACAGCGGGTACGT+CGG | 0.597817 | 4.4:-15070707 | None:intergenic |
| GTCCCCTTCAGCGACTCAAG+TGG | 0.599673 | 4.4:+15071176 | MS.gene08995:CDS |
| CGTACCCGCTGTTACTGATG+TGG | 0.601142 | 4.4:+15070711 | MS.gene08995:CDS |
| AGGGTAATGATGGAATTGAA+AGG | 0.601216 | 4.4:+15067464 | MS.gene08995:CDS |
| GCACGTCTATGTTTAGCACT+GGG | 0.604128 | 4.4:-15067183 | None:intergenic |
| TCAAGTTTATCATCATGCAC+AGG | 0.606593 | 4.4:-15069437 | None:intergenic |
| CGATGGAGCTGTTAATCCGA+AGG | 0.607106 | 4.4:+15069232 | MS.gene08995:CDS |
| GAACCAACCAGCTGGTGAGG+TGG | 0.610714 | 4.4:-15070941 | None:intergenic |
| CTCAGCAAATGAATTTCAGA+GGG | 0.613657 | 4.4:+15069787 | MS.gene08995:CDS |
| GAGGTGGAATTTGACTGTTG+TGG | 0.614718 | 4.4:-15070925 | None:intergenic |
| ATCGCCCATGTCATGATCCA+GGG | 0.615636 | 4.4:-15069213 | None:intergenic |
| GTTGTAGGTGAAACATATGA+AGG | 0.617101 | 4.4:+15069158 | MS.gene08995:CDS |
| GACAGTTTGGAAGGCAACTG+GGG | 0.618249 | 4.4:+15070565 | MS.gene08995:CDS |
| CAAACCAAAACTCACACTCC+AGG | 0.620575 | 4.4:+15066891 | MS.gene08995:CDS |
| GAAGAATCGAGCATTGTGCA+TGG | 0.624518 | 4.4:+15068930 | MS.gene08995:CDS |
| CGAAGGAAAAGAAGGAACCT+GGG | 0.625892 | 4.4:+15069249 | MS.gene08995:CDS |
| ACATTCTTCTATATATTCCG+GGG | 0.626261 | 4.4:+15070387 | MS.gene08995:CDS |
| GTTTATGTGTGTCACAAATG+TGG | 0.626539 | 4.4:+15067138 | MS.gene08995:CDS |
| AGCAAATGAATTTCAGAGGG+AGG | 0.627525 | 4.4:+15069790 | MS.gene08995:CDS |
| GTTTCCACATCAGTAACAGC+GGG | 0.628983 | 4.4:-15070715 | None:intergenic |
| AATTGAATCATCTTCAACGG+CGG | 0.629840 | 4.4:-15070221 | None:intergenic |
| CGCCTTTAGGACTAGCCACG+TGG | 0.638553 | 4.4:-15070882 | None:intergenic |
| TCAATTGCCAGGCTCTACTG+TGG | 0.639109 | 4.4:+15068872 | MS.gene08995:CDS |
| TCTCAGCAAATGAATTTCAG+AGG | 0.641846 | 4.4:+15069786 | MS.gene08995:CDS |
| GGATGCACAACTGTTAGTGA+AGG | 0.645045 | 4.4:+15070333 | MS.gene08995:CDS |
| CGTGCTCACAAGAAGATCTG+TGG | 0.645475 | 4.4:+15067201 | MS.gene08995:CDS |
| AACCAGTTGAGTGAAAGAAG+TGG | 0.653078 | 4.4:+15069536 | MS.gene08995:CDS |
| GTTGGGTTCAAACAATGACA+AGG | 0.660340 | 4.4:+15067444 | MS.gene08995:CDS |
| CAACAGTGGATCCTCAGCGA+AGG | 0.662422 | 4.4:+15071313 | MS.gene08995:CDS |
| TCACCCAAAAGACTCTTGAG+AGG | 0.662449 | 4.4:-15071063 | None:intergenic |
| ATTTCCCTGGATCATGACAT+GGG | 0.666282 | 4.4:+15069209 | MS.gene08995:CDS |
| TCTTGAGGAAATTCATACTG+GGG | 0.669903 | 4.4:-15069287 | None:intergenic |
| ACATGAGGAACATGTTACTG+AGG | 0.675935 | 4.4:+15069490 | MS.gene08995:CDS |
| TGCCTTCCAAACTGTCACGC+CGG | 0.676751 | 4.4:-15070558 | None:intergenic |
| ATATCCTGCAAATATCAAGA+GGG | 0.682748 | 4.4:+15071239 | MS.gene08995:CDS |
| GAGCGTGTCATTGAAACATG+AGG | 0.691606 | 4.4:+15069475 | MS.gene08995:CDS |
| TAATTTGAAAGGAAGCGATG+AGG | 0.691934 | 4.4:+15069088 | MS.gene08995:CDS |
| CTCGCCAATAATCACGAACG+AGG | 0.692947 | 4.4:+15069316 | MS.gene08995:CDS |
| GATGATGATTACAAAACACC+AGG | 0.694441 | 4.4:+15067270 | MS.gene08995:CDS |
| TTGGGTTCAAACAATGACAA+GGG | 0.695404 | 4.4:+15067445 | MS.gene08995:CDS |
| GATTGCAAGTGGTCACTACG+AGG | 0.698031 | 4.4:-15069953 | None:intergenic |
| GAGTCAGCAGCAATACCAGT+CGG | 0.699186 | 4.4:-15070091 | None:intergenic |
| AGTTTCCACATCAGTAACAG+CGG | 0.700785 | 4.4:-15070716 | None:intergenic |
| ATTGGTTGAGCCTAGCCACG+TGG | 0.726239 | 4.4:+15070867 | MS.gene08995:CDS |
| ACTGAAACATCAGTTCCAGG+TGG | 0.735985 | 4.4:-15070523 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTGGATTTATAATT+TGG | - | chr4.4:15068806-15068825 | None:intergenic | 10.0% |
| !!! | TTTTGTGTATTTTTTTTTAA+GGG | + | chr4.4:15067100-15067119 | MS.gene08995:intron | 10.0% |
| !!! | TTTTTGTGTATTTTTTTTTA+AGG | + | chr4.4:15067099-15067118 | MS.gene08995:intron | 10.0% |
| !! | TTAAATAACACTCATAAAAA+GGG | - | chr4.4:15067903-15067922 | None:intergenic | 15.0% |
| !! | TTACAGATAAGAAAAAAAAT+TGG | - | chr4.4:15068710-15068729 | None:intergenic | 15.0% |
| !!! | AAGTCATTAAATTTTAAACA+AGG | - | chr4.4:15067955-15067974 | None:intergenic | 15.0% |
| !!! | ATAATGTGTTGATATTTTTT+AGG | + | chr4.4:15067412-15067431 | MS.gene08995:intron | 15.0% |
| !!! | ATTTATTTATTTCTCTTTCT+TGG | + | chr4.4:15066961-15066980 | MS.gene08995:intron | 15.0% |
| !!! | GTTTAAAATTTAATGACTTT+AGG | + | chr4.4:15067956-15067975 | MS.gene08995:intron | 15.0% |
| !!! | TTTAATTTAACATTGTTGTT+GGG | + | chr4.4:15067319-15067338 | MS.gene08995:intron | 15.0% |
| !! | ATGAAAAAGAAAAGAAGAAA+AGG | - | chr4.4:15066935-15066954 | None:intergenic | 20.0% |
| !! | CCAAAAATAGAAGAAAATAA+TGG | + | chr4.4:15071114-15071133 | MS.gene08995:CDS | 20.0% |
| !! | CTTAAATAACACTCATAAAA+AGG | - | chr4.4:15067904-15067923 | None:intergenic | 20.0% |
| !! | GCTGGATTAATTATAAATTT+AGG | + | chr4.4:15067865-15067884 | MS.gene08995:intron | 20.0% |
| !! | TCGTAGATTGTAATATAAAT+TGG | - | chr4.4:15068581-15068600 | None:intergenic | 20.0% |
| !! | TGAAAAAGAAAAGAAGAAAA+GGG | - | chr4.4:15066934-15066953 | None:intergenic | 20.0% |
| !! | TTATGATTAACTTAGTCAAT+AGG | + | chr4.4:15067749-15067768 | MS.gene08995:intron | 20.0% |
| !!! | AAATCATTTTTCATGAAAAG+TGG | - | chr4.4:15068085-15068104 | None:intergenic | 20.0% |
| !!! | AATCATTTTTCATGAAAAGT+GGG | - | chr4.4:15068084-15068103 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCTGGCAATAAAT+TGG | - | chr4.4:15069012-15069031 | None:intergenic | 20.0% |
| !!! | CCATTATTTTCTTCTATTTT+TGG | - | chr4.4:15071117-15071136 | None:intergenic | 20.0% |
| !!! | GTTTAATTTAACATTGTTGT+TGG | + | chr4.4:15067318-15067337 | MS.gene08995:intron | 20.0% |
| !!! | TAACTTGATTTGAAAATCAA+CGG | + | chr4.4:15068247-15068266 | MS.gene08995:intron | 20.0% |
| !!! | TTTAACTTTCCAAAATATGA+TGG | + | chr4.4:15067381-15067400 | MS.gene08995:intron | 20.0% |
| !!! | TTTGTTCTTTTCATGTTAAA+GGG | + | chr4.4:15067054-15067073 | MS.gene08995:intron | 20.0% |
| !!! | TTTTTTTCTGGCAATAAATT+GGG | - | chr4.4:15069011-15069030 | None:intergenic | 20.0% |
| ! | AAATGCATATTCAATGTTTG+TGG | - | chr4.4:15068657-15068676 | None:intergenic | 25.0% |
| ! | ATAGAAGAAAATAATGGTTC+TGG | + | chr4.4:15071120-15071139 | MS.gene08995:CDS | 25.0% |
| ! | ATTTAATGACTTTAGGCTTA+AGG | + | chr4.4:15067963-15067982 | MS.gene08995:intron | 25.0% |
| ! | CAAGTTTAACCAAGTTATTA+CGG | - | chr4.4:15070270-15070289 | None:intergenic | 25.0% |
| ! | CCAGAAAAAAATATTTATGC+TGG | + | chr4.4:15069020-15069039 | MS.gene08995:CDS | 25.0% |
| ! | GAAAAAGAAAAGAAGAAAAG+GGG | - | chr4.4:15066933-15066952 | None:intergenic | 25.0% |
| ! | TATCAAATATCGCATGAAAT+CGG | + | chr4.4:15069665-15069684 | MS.gene08995:CDS | 25.0% |
| ! | TCACATTCTTCTATATATTC+CGG | + | chr4.4:15070385-15070404 | MS.gene08995:CDS | 25.0% |
| ! | TTATCGAATTGAAGTTATAG+CGG | - | chr4.4:15068483-15068502 | None:intergenic | 25.0% |
| ! | TTGAAATCGTACAAAAATCA+GGG | - | chr4.4:15068506-15068525 | None:intergenic | 25.0% |
| ! | TTTAATGACTTTAGGCTTAA+GGG | + | chr4.4:15067964-15067983 | MS.gene08995:intron | 25.0% |
| !! | AACAAATTCAAAAGCTTTAG+AGG | - | chr4.4:15067927-15067946 | None:intergenic | 25.0% |
| !! | ATGACTTTACTTTATTTAGC+CGG | + | chr4.4:15067653-15067672 | MS.gene08995:intron | 25.0% |
| !! | CTTTCACTTTGCATAATTTT+TGG | - | chr4.4:15068819-15068838 | None:intergenic | 25.0% |
| !! | CTTTGTTCTTTTCATGTTAA+AGG | + | chr4.4:15067053-15067072 | MS.gene08995:intron | 25.0% |
| !! | TGATAACCTGATTTAAAGTT+GGG | - | chr4.4:15070966-15070985 | None:intergenic | 25.0% |
| !! | TTGATAACCTGATTTAAAGT+TGG | - | chr4.4:15070967-15070986 | None:intergenic | 25.0% |
| !! | TTTAGCAAACCATCATATTT+TGG | - | chr4.4:15067393-15067412 | None:intergenic | 25.0% |
| !!! | AGCTGAAATTTTGGAATTTT+CGG | - | chr4.4:15068363-15068382 | None:intergenic | 25.0% |
| !!! | CCAGCATAAATATTTTTTTC+TGG | - | chr4.4:15069023-15069042 | None:intergenic | 25.0% |
| !!! | GTGTTGATATTTTTTAGGTT+TGG | + | chr4.4:15067417-15067436 | MS.gene08995:intron | 25.0% |
| !!! | TCTTCTATTTTTGGTGATTT+CGG | - | chr4.4:15071108-15071127 | None:intergenic | 25.0% |
| AAATGTGACAGATTGTAGTT+TGG | + | chr4.4:15069046-15069065 | MS.gene08995:CDS | 30.0% | |
| ACAACTGTTAACTCAATTCT+TGG | + | chr4.4:15071147-15071166 | MS.gene08995:CDS | 30.0% | |
| ACATTCTTCTATATATTCCG+GGG | + | chr4.4:15070387-15070406 | MS.gene08995:CDS | 30.0% | |
| AGCAATCAAGTGAGTTATTT+AGG | + | chr4.4:15069984-15070003 | MS.gene08995:CDS | 30.0% | |
| AGGTAAAATCAGAAAAAGAC+AGG | + | chr4.4:15069108-15069127 | MS.gene08995:CDS | 30.0% | |
| ATAAAGAAAGGCAACAATGA+CGG | - | chr4.4:15070611-15070630 | None:intergenic | 30.0% | |
| ATATCCTGCAAATATCAAGA+GGG | + | chr4.4:15071239-15071258 | MS.gene08995:CDS | 30.0% | |
| ATCATCTGAACCATTGAAAT+TGG | - | chr4.4:15067256-15067275 | None:intergenic | 30.0% | |
| ATTGCCTGTTAAAATATGGT+TGG | + | chr4.4:15068030-15068049 | MS.gene08995:intron | 30.0% | |
| ATTGTAACTGTAAACTTACC+TGG | - | chr4.4:15067291-15067310 | None:intergenic | 30.0% | |
| ATTTAGTAGATCAGAAAGTG+AGG | + | chr4.4:15067489-15067508 | MS.gene08995:CDS | 30.0% | |
| CAAGAACATAATTTGAACTC+AGG | + | chr4.4:15067580-15067599 | MS.gene08995:CDS | 30.0% | |
| CACATTCTTCTATATATTCC+GGG | + | chr4.4:15070386-15070405 | MS.gene08995:CDS | 30.0% | |
| CCAAGAAATGTTAGAACTAA+TGG | + | chr4.4:15068119-15068138 | MS.gene08995:intron | 30.0% | |
| CGTAATAACTTGGTTAAACT+TGG | + | chr4.4:15070268-15070287 | MS.gene08995:CDS | 30.0% | |
| GAACTTTCATGAATTTCATC+AGG | - | chr4.4:15069743-15069762 | None:intergenic | 30.0% | |
| GAAGAACAAACCAATTTCAA+TGG | + | chr4.4:15067243-15067262 | MS.gene08995:CDS | 30.0% | |
| GGTAAAATCAGAAAAAGACA+GGG | + | chr4.4:15069109-15069128 | MS.gene08995:CDS | 30.0% | |
| GTTGAAATCGTACAAAAATC+AGG | - | chr4.4:15068507-15068526 | None:intergenic | 30.0% | |
| TATCCAAACATAGCATTACT+TGG | + | chr4.4:15067797-15067816 | MS.gene08995:intron | 30.0% | |
| TCAACCTGAAAGTAGTTTAA+TGG | + | chr4.4:15069763-15069782 | MS.gene08995:CDS | 30.0% | |
| TCATCGAGATAACTGTTTAA+AGG | - | chr4.4:15070684-15070703 | None:intergenic | 30.0% | |
| TCCAATTGAATCATCTTCAA+CGG | - | chr4.4:15070227-15070246 | None:intergenic | 30.0% | |
| TGCTTTGTGCAAATAAAGAA+AGG | - | chr4.4:15070623-15070642 | None:intergenic | 30.0% | |
| TTATTGCTTTGATCATCAAC+CGG | - | chr4.4:15070484-15070503 | None:intergenic | 30.0% | |
| TTCATGTTAAAGGGTCAAAA+GGG | + | chr4.4:15067063-15067082 | MS.gene08995:intron | 30.0% | |
| TTCCATTGCCTGTTAAAATA+TGG | + | chr4.4:15068026-15068045 | MS.gene08995:intron | 30.0% | |
| TTCTTCTTTGTAACCTTCAA+TGG | - | chr4.4:15067229-15067248 | None:intergenic | 30.0% | |
| TTCTTGAGGAAATTCATACT+GGG | - | chr4.4:15069291-15069310 | None:intergenic | 30.0% | |
| TTGTACTCAGAAGACATTAA+AGG | - | chr4.4:15067610-15067629 | None:intergenic | 30.0% | |
| TTTCATGTTAAAGGGTCAAA+AGG | + | chr4.4:15067062-15067081 | MS.gene08995:intron | 30.0% | |
| ! | AATAATTTTCCTGAAGAGCA+TGG | + | chr4.4:15069716-15069735 | MS.gene08995:CDS | 30.0% |
| ! | CATTGTTGTTGGGAAATAAT+AGG | + | chr4.4:15067329-15067348 | MS.gene08995:intron | 30.0% |
| ! | GAAAAGGAGCTTAATTTGAA+AGG | + | chr4.4:15069077-15069096 | MS.gene08995:CDS | 30.0% |
| ! | TATTAAGGCAGCTGAAATTT+TGG | - | chr4.4:15068372-15068391 | None:intergenic | 30.0% |
| ! | TCTTGGTTTACATGCTTTTA+CGG | + | chr4.4:15066978-15066997 | MS.gene08995:intron | 30.0% |
| !! | CCATTAGTTCTAACATTTCT+TGG | - | chr4.4:15068122-15068141 | None:intergenic | 30.0% |
| !! | TTTGGATTTTGACGAAATTG+TGG | + | chr4.4:15067678-15067697 | MS.gene08995:intron | 30.0% |
| !!! | AACCATATTTTAACAGGCAA+TGG | - | chr4.4:15068031-15068050 | None:intergenic | 30.0% |
| !!! | AGTTTTGAAGTGGGAAATAT+AGG | + | chr4.4:15068837-15068856 | MS.gene08995:CDS | 30.0% |
| !!! | CAAAGTGAAAGTTTTGAAGT+GGG | + | chr4.4:15068828-15068847 | MS.gene08995:CDS | 30.0% |
| !!! | TTTTTAGGTTTGGTTGAGTT+GGG | + | chr4.4:15067427-15067446 | MS.gene08995:intron | 30.0% |
| !!! | TTTTTTAGGTTTGGTTGAGT+TGG | + | chr4.4:15067426-15067445 | MS.gene08995:intron | 30.0% |
| AAAAGACAGGGTTGAAATCA+TGG | + | chr4.4:15069121-15069140 | MS.gene08995:CDS | 35.0% | |
| AACAATGACAAGGGTAATGA+TGG | + | chr4.4:15067454-15067473 | MS.gene08995:CDS | 35.0% | |
| AAGAAAAGGCTGCAAATGAA+TGG | + | chr4.4:15071202-15071221 | MS.gene08995:CDS | 35.0% | |
| AATTGAATCATCTTCAACGG+CGG | - | chr4.4:15070224-15070243 | None:intergenic | 35.0% | |
| ACAAAAATACATGCACTTGC+AGG | - | chr4.4:15068302-15068321 | None:intergenic | 35.0% | |
| AGAATGTGATGTATACTTGC+TGG | - | chr4.4:15070374-15070393 | None:intergenic | 35.0% | |
| AGATCAAAGCCGTAATAACT+TGG | + | chr4.4:15070258-15070277 | MS.gene08995:CDS | 35.0% | |
| ATAAACGATGCATCTGTAGT+TGG | + | chr4.4:15069872-15069891 | MS.gene08995:CDS | 35.0% | |
| ATATTTGCAGGATATCTTGC+TGG | - | chr4.4:15071234-15071253 | None:intergenic | 35.0% | |
| CAAACCAACTGTATCCAAAA+TGG | - | chr4.4:15071288-15071307 | None:intergenic | 35.0% | |
| CACAGTAGAAAATTAGTTGC+TGG | + | chr4.4:15067847-15067866 | MS.gene08995:intron | 35.0% | |
| CTCAGCAAATGAATTTCAGA+GGG | + | chr4.4:15069787-15069806 | MS.gene08995:CDS | 35.0% | |
| CTTCTTGAGGAAATTCATAC+TGG | - | chr4.4:15069292-15069311 | None:intergenic | 35.0% | |
| GAAATGTTAGAACTAATGGC+TGG | + | chr4.4:15068123-15068142 | MS.gene08995:intron | 35.0% | |
| GAAATTGTGGTTACACTATG+CGG | + | chr4.4:15067691-15067710 | MS.gene08995:intron | 35.0% | |
| GAAGAAAAGGGGAAAGAAAA+AGG | - | chr4.4:15066922-15066941 | None:intergenic | 35.0% | |
| GAGACCATTAAACTACTTTC+AGG | - | chr4.4:15069770-15069789 | None:intergenic | 35.0% | |
| GATATCCTGCAAATATCAAG+AGG | + | chr4.4:15071238-15071257 | MS.gene08995:CDS | 35.0% | |
| GATGATGATTACAAAACACC+AGG | + | chr4.4:15067270-15067289 | MS.gene08995:CDS | 35.0% | |
| GCCTTAATACGCTATTAAAG+CGG | + | chr4.4:15068383-15068402 | MS.gene08995:intron | 35.0% | |
| GTTGTAGGTGAAACATATGA+AGG | + | chr4.4:15069158-15069177 | MS.gene08995:CDS | 35.0% | |
| GTTTATGTGTGTCACAAATG+TGG | + | chr4.4:15067138-15067157 | MS.gene08995:CDS | 35.0% | |
| TAATTTGAAAGGAAGCGATG+AGG | + | chr4.4:15069088-15069107 | MS.gene08995:CDS | 35.0% | |
| TACTACTTGTAATGAAGTCG+AGG | + | chr4.4:15069370-15069389 | MS.gene08995:CDS | 35.0% | |
| TCAACCAATGTTGTGAAAGA+TGG | - | chr4.4:15070856-15070875 | None:intergenic | 35.0% | |
| TCAAGTTTATCATCATGCAC+AGG | - | chr4.4:15069440-15069459 | None:intergenic | 35.0% | |
| TCCGCTTTAATAGCGTATTA+AGG | - | chr4.4:15068387-15068406 | None:intergenic | 35.0% | |
| TCTCAGCAAATGAATTTCAG+AGG | + | chr4.4:15069786-15069805 | MS.gene08995:CDS | 35.0% | |
| TCTGCTGTTGAAGATAATTC+AGG | + | chr4.4:15070427-15070446 | MS.gene08995:CDS | 35.0% | |
| TCTTGAGGAAATTCATACTG+GGG | - | chr4.4:15069290-15069309 | None:intergenic | 35.0% | |
| TGACCAAGTAATGCTATGTT+TGG | - | chr4.4:15067803-15067822 | None:intergenic | 35.0% | |
| TGTTAATCCGAAGGAAAAGA+AGG | + | chr4.4:15069241-15069260 | MS.gene08995:CDS | 35.0% | |
| TTGAAGTGGGAAATATAGGT+GGG | + | chr4.4:15068841-15068860 | MS.gene08995:CDS | 35.0% | |
| TTGACTAAATTAACTCCACC+TGG | + | chr4.4:15070508-15070527 | MS.gene08995:CDS | 35.0% | |
| TTGGGTTCAAACAATGACAA+GGG | + | chr4.4:15067445-15067464 | MS.gene08995:CDS | 35.0% | |
| TTGGTCATAACTCATACGTA+TGG | + | chr4.4:15067816-15067835 | MS.gene08995:intron | 35.0% | |
| TTGGTTAAACTTGGTTCATC+TGG | + | chr4.4:15070277-15070296 | MS.gene08995:CDS | 35.0% | |
| TTGGTTCCCAACTTTAAATC+AGG | + | chr4.4:15070957-15070976 | MS.gene08995:CDS | 35.0% | |
| TTTCGTCAAAATCCAAACAC+CGG | - | chr4.4:15067675-15067694 | None:intergenic | 35.0% | |
| ! | AATTGAAGAGCAGACCATTT+TGG | + | chr4.4:15071271-15071290 | MS.gene08995:CDS | 35.0% |
| ! | AGGAATAATAGTGATGATGC+TGG | + | chr4.4:15070004-15070023 | MS.gene08995:CDS | 35.0% |
| ! | AGGGTAATGATGGAATTGAA+AGG | + | chr4.4:15067464-15067483 | MS.gene08995:CDS | 35.0% |
| ! | CATTTTTCATGAAAAGTGGG+AGG | - | chr4.4:15068081-15068100 | None:intergenic | 35.0% |
| ! | TACTTTATTTAGCCGGTGTT+TGG | + | chr4.4:15067660-15067679 | MS.gene08995:intron | 35.0% |
| ! | TTTGAAGTGGGAAATATAGG+TGG | + | chr4.4:15068840-15068859 | MS.gene08995:CDS | 35.0% |
| ! | TTTTCCCTCTTGATATTTGC+AGG | - | chr4.4:15071246-15071265 | None:intergenic | 35.0% |
| !! | AGATTGCTCTGAAGTTTCTT+TGG | + | chr4.4:15069622-15069641 | MS.gene08995:CDS | 35.0% |
| !! | ATTTGACTGTTGTGGTTTTG+CGG | - | chr4.4:15070920-15070939 | None:intergenic | 35.0% |
| !! | GCAAGTGCATGTATTTTTGT+CGG | + | chr4.4:15068302-15068321 | MS.gene08995:intron | 35.0% |
| !! | TAGTTTGGTGTGTGATGAAA+AGG | + | chr4.4:15069061-15069080 | MS.gene08995:CDS | 35.0% |
| !! | TCTGCAATTGAGCTTGTTAA+TGG | - | chr4.4:15068900-15068919 | None:intergenic | 35.0% |
| !! | TTTTAAGGGAACGAGAATCA+TGG | + | chr4.4:15067114-15067133 | MS.gene08995:intron | 35.0% |
| !!! | AGATGCTGTTGATGATTTTC+CGG | + | chr4.4:15067519-15067538 | MS.gene08995:CDS | 35.0% |
| !!! | GCAAAGTGAAAGTTTTGAAG+TGG | + | chr4.4:15068827-15068846 | MS.gene08995:CDS | 35.0% |
| !!! | GGATTTTGAGGTTTCCAATA+TGG | - | chr4.4:15068437-15068456 | None:intergenic | 35.0% |
| !!! | TGTGAGTTTTGGTTTGATCT+TGG | - | chr4.4:15066887-15066906 | None:intergenic | 35.0% |
| !!! | TTGATTTGGCTTTTCTCAAG+TGG | + | chr4.4:15068191-15068210 | MS.gene08995:intron | 35.0% |
| AAACTTGATGCAGCTTATCC+TGG | + | chr4.4:15069452-15069471 | MS.gene08995:CDS | 40.0% | |
| AACCAGTTGAGTGAAAGAAG+TGG | + | chr4.4:15069536-15069555 | MS.gene08995:CDS | 40.0% | |
| AACTCATACGTATGGACTTG+TGG | + | chr4.4:15067824-15067843 | MS.gene08995:intron | 40.0% | |
| AACTTGATGCAGCTTATCCT+GGG | + | chr4.4:15069453-15069472 | MS.gene08995:CDS | 40.0% | |
| AAGATCTGTGGAACCATTGA+AGG | + | chr4.4:15067213-15067232 | MS.gene08995:CDS | 40.0% | |
| AATTTCCCTGGATCATGACA+TGG | + | chr4.4:15069208-15069227 | MS.gene08995:CDS | 40.0% | |
| ACATGAGGAACATGTTACTG+AGG | + | chr4.4:15069490-15069509 | MS.gene08995:CDS | 40.0% | |
| ACTACGCACTTTATACCCTA+AGG | - | chr4.4:15068225-15068244 | None:intergenic | 40.0% | |
| AGCAAATGAATTTCAGAGGG+AGG | + | chr4.4:15069790-15069809 | MS.gene08995:CDS | 40.0% | |
| AGTTAACGAAGCAATTTCCC+TGG | + | chr4.4:15069196-15069215 | MS.gene08995:CDS | 40.0% | |
| AGTTTCCACATCAGTAACAG+CGG | - | chr4.4:15070719-15070738 | None:intergenic | 40.0% | |
| ATGTGTGTCACAAATGTGGT+TGG | + | chr4.4:15067142-15067161 | MS.gene08995:CDS | 40.0% | |
| ATTGGCGAGTTTACTTCTTG+AGG | - | chr4.4:15069305-15069324 | None:intergenic | 40.0% | |
| ATTTCCCTGGATCATGACAT+GGG | + | chr4.4:15069209-15069228 | MS.gene08995:CDS | 40.0% | |
| CAAGTGGAAAATGCACCTTA+GGG | + | chr4.4:15068207-15068226 | MS.gene08995:intron | 40.0% | |
| CTCTTCAGAGATGCATGTTA+TGG | + | chr4.4:15069565-15069584 | MS.gene08995:CDS | 40.0% | |
| GAAGAGAATAAGAAACCGAC+TGG | + | chr4.4:15070076-15070095 | MS.gene08995:CDS | 40.0% | |
| GACTCAAGTGGTGAAAGAAA+AGG | + | chr4.4:15071188-15071207 | MS.gene08995:CDS | 40.0% | |
| GAGGTTTCCAATATGGTGAA+TGG | - | chr4.4:15068430-15068449 | None:intergenic | 40.0% | |
| GCCGTTGAAGATGATTCAAT+TGG | + | chr4.4:15070223-15070242 | MS.gene08995:CDS | 40.0% | |
| GCCTGTTAAAATATGGTTGG+TGG | + | chr4.4:15068033-15068052 | MS.gene08995:intron | 40.0% | |
| GTGGAAACTTTACCATCAAC+CGG | + | chr4.4:15070730-15070749 | MS.gene08995:CDS | 40.0% | |
| GTTGGGTTCAAACAATGACA+AGG | + | chr4.4:15067444-15067463 | MS.gene08995:CDS | 40.0% | |
| GTTTCCAATATGGTGAATGG+CGG | - | chr4.4:15068427-15068446 | None:intergenic | 40.0% | |
| TCAACTGAAACATCAGTTCC+AGG | - | chr4.4:15070529-15070548 | None:intergenic | 40.0% | |
| TCAAGTGGAAAATGCACCTT+AGG | + | chr4.4:15068206-15068225 | MS.gene08995:intron | 40.0% | |
| TGAGAAAACCCAGAAAGACA+AGG | - | chr4.4:15067009-15067028 | None:intergenic | 40.0% | |
| TTAGGCTTAAGGGAGAAGTT+TGG | + | chr4.4:15067974-15067993 | MS.gene08995:intron | 40.0% | |
| TTATCATCATGCACAGGAAG+TGG | - | chr4.4:15069434-15069453 | None:intergenic | 40.0% | |
| TTCTGGCAATAAATTGGGCA+TGG | - | chr4.4:15069006-15069025 | None:intergenic | 40.0% | |
| TTTCATGAAAAGTGGGAGGT+GGG | - | chr4.4:15068077-15068096 | None:intergenic | 40.0% | |
| ! | ACACCTCTCAAGAGTCTTTT+GGG | + | chr4.4:15071060-15071079 | MS.gene08995:CDS | 40.0% |
| ! | ACATTCACGTCTTCCTTTTG+TGG | - | chr4.4:15069401-15069420 | None:intergenic | 40.0% |
| ! | ACTGATGTTTCAGTTGACTC+TGG | + | chr4.4:15070532-15070551 | MS.gene08995:CDS | 40.0% |
| ! | AGTGATGATGCTGGTGAAAA+TGG | + | chr4.4:15070013-15070032 | MS.gene08995:CDS | 40.0% |
| ! | CAGACCATTTTGGATACAGT+TGG | + | chr4.4:15071281-15071300 | MS.gene08995:CDS | 40.0% |
| ! | CTCAAAATCCGATACCGATT+TGG | + | chr4.4:15068447-15068466 | MS.gene08995:intron | 40.0% |
| ! | GAGTCAACTGATAACGTTGT+AGG | + | chr4.4:15069143-15069162 | MS.gene08995:CDS | 40.0% |
| ! | TTACGGCTTTGATCTTGAAC+AGG | - | chr4.4:15070253-15070272 | None:intergenic | 40.0% |
| ! | TTTTCATGAAAAGTGGGAGG+TGG | - | chr4.4:15068078-15068097 | None:intergenic | 40.0% |
| !! | CAAATCGGTATCGGATTTTG+AGG | - | chr4.4:15068449-15068468 | None:intergenic | 40.0% |
| !! | GGAAAGAAAAAGGAAGTACC+TGG | - | chr4.4:15066912-15066931 | None:intergenic | 40.0% |
| !! | TCTGCTCTGGTTTGTTATCT+TGG | - | chr4.4:15071028-15071047 | None:intergenic | 40.0% |
| !! | TTTGTCGGTGTTATCTACAG+CGG | + | chr4.4:15068317-15068336 | MS.gene08995:intron | 40.0% |
| !!! | GCCACCAACCATATTTTAAC+AGG | - | chr4.4:15068037-15068056 | None:intergenic | 40.0% |
| !!! | GTTGATGATTTTCCGGATAG+TGG | + | chr4.4:15067526-15067545 | MS.gene08995:CDS | 40.0% |
| AAGTGAGAGATGCACTTCAG+AGG | - | chr4.4:15068544-15068563 | None:intergenic | 45.0% | |
| AATAATCACGAACGAGGCTC+AGG | + | chr4.4:15069322-15069341 | MS.gene08995:CDS | 45.0% | |
| ACGGAAAGTCCTTGTCTTTC+TGG | + | chr4.4:15066997-15067016 | MS.gene08995:intron | 45.0% | |
| ACTGAAACATCAGTTCCAGG+TGG | - | chr4.4:15070526-15070545 | None:intergenic | 45.0% | |
| AGCACGTCTATGTTTAGCAC+TGG | - | chr4.4:15067187-15067206 | None:intergenic | 45.0% | |
| AGTGAGAGATGCACTTCAGA+GGG | - | chr4.4:15068543-15068562 | None:intergenic | 45.0% | |
| ATACTGGGGCAGCAAAGAAA+GGG | - | chr4.4:15069276-15069295 | None:intergenic | 45.0% | |
| CAAACCAAAACTCACACTCC+AGG | + | chr4.4:15066891-15066910 | MS.gene08995:CDS | 45.0% | |
| CACCACTTCTTTCACTCAAC+TGG | - | chr4.4:15069541-15069560 | None:intergenic | 45.0% | |
| CCTTGACTTAGTCCACTATC+CGG | - | chr4.4:15067541-15067560 | None:intergenic | 45.0% | |
| CGAAGGAAAAGAAGGAACCT+GGG | + | chr4.4:15069249-15069268 | MS.gene08995:CDS | 45.0% | |
| CGATGCATCTGTAGTTGGAA+AGG | + | chr4.4:15069877-15069896 | MS.gene08995:CDS | 45.0% | |
| CGGAAAGTCCTTGTCTTTCT+GGG | + | chr4.4:15066998-15067017 | MS.gene08995:intron | 45.0% | |
| CTATTAAAGCGGAGTGTGGT+GGG | + | chr4.4:15068394-15068413 | MS.gene08995:intron | 45.0% | |
| CTGGGATGTGGATTTGGAAA+AGG | - | chr4.4:15067168-15067187 | None:intergenic | 45.0% | |
| CTTTGATCATCAACCGGCAT+TGG | - | chr4.4:15070478-15070497 | None:intergenic | 45.0% | |
| GAGGTGGAATTTGACTGTTG+TGG | - | chr4.4:15070928-15070947 | None:intergenic | 45.0% | |
| GATGTGAGTCCACTTATTGC+TGG | + | chr4.4:15068765-15068784 | MS.gene08995:CDS | 45.0% | |
| GCACGTCTATGTTTAGCACT+GGG | - | chr4.4:15067186-15067205 | None:intergenic | 45.0% | |
| GCTCAACTTCTGATTGCAAG+TGG | - | chr4.4:15069967-15069986 | None:intergenic | 45.0% | |
| GCTGCCATCTTTCACAACAT+TGG | + | chr4.4:15070849-15070868 | MS.gene08995:CDS | 45.0% | |
| GGATGAACAGCTATCAGTGA+AGG | + | chr4.4:15070126-15070145 | MS.gene08995:CDS | 45.0% | |
| GGATGCACAACTGTTAGTGA+AGG | + | chr4.4:15070333-15070352 | MS.gene08995:CDS | 45.0% | |
| GTTTCCACATCAGTAACAGC+GGG | - | chr4.4:15070718-15070737 | None:intergenic | 45.0% | |
| TACGCTATTAAAGCGGAGTG+TGG | + | chr4.4:15068390-15068409 | MS.gene08995:intron | 45.0% | |
| TCACCCAAAAGACTCTTGAG+AGG | - | chr4.4:15071066-15071085 | None:intergenic | 45.0% | |
| TCTGTAGTTGGAAAGGTTGC+AGG | + | chr4.4:15069884-15069903 | MS.gene08995:CDS | 45.0% | |
| TGACAGTTTGGAAGGCAACT+GGG | + | chr4.4:15070564-15070583 | MS.gene08995:CDS | 45.0% | |
| TGAGCCTCGTTCGTGATTAT+TGG | - | chr4.4:15069323-15069342 | None:intergenic | 45.0% | |
| TGTGCTCTTTACTTCTGCTC+TGG | - | chr4.4:15071041-15071060 | None:intergenic | 45.0% | |
| TTGCTTGAGCCAGCAATAAG+TGG | - | chr4.4:15068777-15068796 | None:intergenic | 45.0% | |
| ! | AGTACCTGGAGTGTGAGTTT+TGG | - | chr4.4:15066898-15066917 | None:intergenic | 45.0% |
| ! | AGTCGAGGTTTTGCCACAAA+AGG | + | chr4.4:15069385-15069404 | MS.gene08995:CDS | 45.0% |
| ! | CACACCTCTCAAGAGTCTTT+TGG | + | chr4.4:15071059-15071078 | MS.gene08995:CDS | 45.0% |
| ! | CCAGGTTCCTTCTTTTCCTT+CGG | - | chr4.4:15069251-15069270 | None:intergenic | 45.0% |
| ! | CTATGTTTAGCACTGGGATG+TGG | - | chr4.4:15067180-15067199 | None:intergenic | 45.0% |
| ! | GAAGAATCGAGCATTGTGCA+TGG | + | chr4.4:15068930-15068949 | MS.gene08995:CDS | 45.0% |
| ! | GAGCGTGTCATTGAAACATG+AGG | + | chr4.4:15069475-15069494 | MS.gene08995:CDS | 45.0% |
| ! | GTGATGTATACTTGCTGGCA+AGG | - | chr4.4:15070369-15070388 | None:intergenic | 45.0% |
| ! | TTAGCACTGGGATGTGGATT+TGG | - | chr4.4:15067174-15067193 | None:intergenic | 45.0% |
| ! | TTTCAGTTGACTCTGGTAGC+CGG | + | chr4.4:15070539-15070558 | MS.gene08995:CDS | 45.0% |
| !! | GTTGGTTTGTTGCACAACAG+TGG | + | chr4.4:15071299-15071318 | MS.gene08995:CDS | 45.0% |
| !! | TCTCAAGAGTCTTTTGGGTG+AGG | + | chr4.4:15071065-15071084 | MS.gene08995:CDS | 45.0% |
| !! | TGGTTTTGCGGTTTCAGAAG+TGG | - | chr4.4:15070908-15070927 | None:intergenic | 45.0% |
| !!! | TTTATAATTTTATATTGATT+TGG | + | chr4.4:15068177-15068196 | MS.gene08995:intron | 5.0% |
| AAAGGTTGCAGGAGCAGATG+TGG | + | chr4.4:15069895-15069914 | MS.gene08995:CDS | 50.0% | |
| AAAGTTGGGAACCAACCAGC+TGG | - | chr4.4:15070952-15070971 | None:intergenic | 50.0% | |
| AATGGATCCACAGTAGAGCC+TGG | - | chr4.4:15068882-15068901 | None:intergenic | 50.0% | |
| AGTTACTGCTGTGCCAATGC+CGG | + | chr4.4:15070462-15070481 | MS.gene08995:CDS | 50.0% | |
| ATCAGTAACAGCGGGTACGT+CGG | - | chr4.4:15070710-15070729 | None:intergenic | 50.0% | |
| ATCGCCCATGTCATGATCCA+GGG | - | chr4.4:15069216-15069235 | None:intergenic | 50.0% | |
| CATACTGGGGCAGCAAAGAA+AGG | - | chr4.4:15069277-15069296 | None:intergenic | 50.0% | |
| CCGAAGGAAAAGAAGGAACC+TGG | + | chr4.4:15069248-15069267 | MS.gene08995:CDS | 50.0% | |
| CGATGGAGCTGTTAATCCGA+AGG | + | chr4.4:15069232-15069251 | MS.gene08995:CDS | 50.0% | |
| CGTGCTCACAAGAAGATCTG+TGG | + | chr4.4:15067201-15067220 | MS.gene08995:CDS | 50.0% | |
| CTCGCCAATAATCACGAACG+AGG | + | chr4.4:15069316-15069335 | MS.gene08995:CDS | 50.0% | |
| CTGACCGCCATTCACCATAT+TGG | + | chr4.4:15068420-15068439 | MS.gene08995:intron | 50.0% | |
| GACAGTTTGGAAGGCAACTG+GGG | + | chr4.4:15070565-15070584 | MS.gene08995:CDS | 50.0% | |
| GAGTCAGCAGCAATACCAGT+CGG | - | chr4.4:15070094-15070113 | None:intergenic | 50.0% | |
| GATTGCAAGTGGTCACTACG+AGG | - | chr4.4:15069956-15069975 | None:intergenic | 50.0% | |
| GCTATTAAAGCGGAGTGTGG+TGG | + | chr4.4:15068393-15068412 | MS.gene08995:intron | 50.0% | |
| GTGACAGTTTGGAAGGCAAC+TGG | + | chr4.4:15070563-15070582 | MS.gene08995:CDS | 50.0% | |
| GTGTTATCTACAGCGGATGG+CGG | + | chr4.4:15068324-15068343 | MS.gene08995:intron | 50.0% | |
| GTTTCAGAAGTGGCGCCTTT+AGG | - | chr4.4:15070898-15070917 | None:intergenic | 50.0% | |
| TCAAATTCCACCTCACCAGC+TGG | + | chr4.4:15070934-15070953 | MS.gene08995:CDS | 50.0% | |
| TCAATTGCCAGGCTCTACTG+TGG | + | chr4.4:15068872-15068891 | MS.gene08995:CDS | 50.0% | |
| TCACCACTTGAGTCGCTGAA+GGG | - | chr4.4:15071182-15071201 | None:intergenic | 50.0% | |
| TCATCAGGTCCATGCTCTTC+AGG | - | chr4.4:15069728-15069747 | None:intergenic | 50.0% | |
| TCATCTTCAACGGCGGAATC+CGG | - | chr4.4:15070217-15070236 | None:intergenic | 50.0% | |
| TGCTGAGCTTTCTGCTGAAC+CGG | + | chr4.4:15070195-15070214 | MS.gene08995:CDS | 50.0% | |
| TGTTTCAATGACACGCTCCC+AGG | - | chr4.4:15069473-15069492 | None:intergenic | 50.0% | |
| TTCACCACTTGAGTCGCTGA+AGG | - | chr4.4:15071183-15071202 | None:intergenic | 50.0% | |
| TTCATCAGTCGCAGACCGAA+AGG | - | chr4.4:15069819-15069838 | None:intergenic | 50.0% | |
| TTGAAGTTATAGCGGCGCCA+TGG | - | chr4.4:15068475-15068494 | None:intergenic | 50.0% | |
| ! | GTGCATGGCGATGGTTTTTC+TGG | + | chr4.4:15068945-15068964 | MS.gene08995:CDS | 50.0% |
| !! | CCGGATAGTGGACTAAGTCA+AGG | + | chr4.4:15067538-15067557 | MS.gene08995:CDS | 50.0% |
| !! | CTGCTGACTCACATGAAGCA+CGG | + | chr4.4:15070311-15070330 | MS.gene08995:CDS | 50.0% |
| !! | GGTGATTTCGGCTTGTTGCT+AGG | - | chr4.4:15071096-15071115 | None:intergenic | 50.0% |
| !! | TCGGTGTTATCTACAGCGGA+TGG | + | chr4.4:15068321-15068340 | MS.gene08995:intron | 50.0% |
| !! | TGCTGACTCACATGAAGCAC+GGG | + | chr4.4:15070312-15070331 | MS.gene08995:CDS | 50.0% |
| !! | TTCAGAGGGAGGCATCCTTT+CGG | + | chr4.4:15069801-15069820 | MS.gene08995:CDS | 50.0% |
| !! | TTTACCATCAACCGGTTCGC+TGG | + | chr4.4:15070738-15070757 | MS.gene08995:CDS | 50.0% |
| AGTGGATCCTCAGCGAAGGT+AGG | + | chr4.4:15071317-15071336 | MS.gene08995:CDS | 55.0% | |
| ATCATGTCGAGCAGAAGCCC+CGG | - | chr4.4:15070407-15070426 | None:intergenic | 55.0% | |
| ATTCCACCTCACCAGCTGGT+TGG | + | chr4.4:15070938-15070957 | MS.gene08995:CDS | 55.0% | |
| CAACAGTGGATCCTCAGCGA+AGG | + | chr4.4:15071313-15071332 | MS.gene08995:CDS | 55.0% | |
| CACCACTTGAGTCGCTGAAG+GGG | - | chr4.4:15071181-15071200 | None:intergenic | 55.0% | |
| CACTTGCAGGCGTGCAACTA+TGG | - | chr4.4:15068289-15068308 | None:intergenic | 55.0% | |
| CATCGCCCATGTCATGATCC+AGG | - | chr4.4:15069217-15069236 | None:intergenic | 55.0% | |
| CATGAAAAGTGGGAGGTGGG+AGG | - | chr4.4:15068074-15068093 | None:intergenic | 55.0% | |
| CCATGGCGCCAAATCGGTAT+CGG | - | chr4.4:15068458-15068477 | None:intergenic | 55.0% | |
| CGTACCCGCTGTTACTGATG+TGG | + | chr4.4:15070711-15070730 | MS.gene08995:CDS | 55.0% | |
| CTGGATCATGACATGGGCGA+TGG | + | chr4.4:15069215-15069234 | MS.gene08995:CDS | 55.0% | |
| GGGACGCAAAGTCAATTGCC+AGG | + | chr4.4:15068861-15068880 | MS.gene08995:CDS | 55.0% | |
| TCTCAGCAGGTGCAGCTTGT+CGG | - | chr4.4:15070798-15070817 | None:intergenic | 55.0% | |
| TGCCTTCCAAACTGTCACGC+CGG | - | chr4.4:15070561-15070580 | None:intergenic | 55.0% | |
| TTCTGTCGATGCCAGCGAAC+CGG | - | chr4.4:15070752-15070771 | None:intergenic | 55.0% | |
| TTGGAAGGCAACTGGGGTTC+TGG | + | chr4.4:15070571-15070590 | MS.gene08995:CDS | 55.0% | |
| ! | AGCCACGTGGCTAGTCCTAA+AGG | + | chr4.4:15070880-15070899 | MS.gene08995:CDS | 55.0% |
| ! | TCGAGCATTGTGCATGGCGA+TGG | + | chr4.4:15068936-15068955 | MS.gene08995:CDS | 55.0% |
| !! | TGCTGACTCGCACGAAGAAC+AGG | + | chr4.4:15070105-15070124 | MS.gene08995:CDS | 55.0% |
| !! | TTAGGACTAGCCACGTGGCT+AGG | - | chr4.4:15070880-15070899 | None:intergenic | 55.0% |
| AGCCGGCGTGACAGTTTGGA+AGG | + | chr4.4:15070556-15070575 | MS.gene08995:CDS | 60.0% | |
| CCAGACAGCTGTCTCTCAGC+AGG | - | chr4.4:15070811-15070830 | None:intergenic | 60.0% | |
| CCTGCTGAGAGACAGCTGTC+TGG | + | chr4.4:15070808-15070827 | MS.gene08995:CDS | 60.0% | |
| GAACCAACCAGCTGGTGAGG+TGG | - | chr4.4:15070944-15070963 | None:intergenic | 60.0% | |
| GATGCCAGCGAACCGGTTGA+TGG | - | chr4.4:15070745-15070764 | None:intergenic | 60.0% | |
| GGCAGCAAAGAAAGGGACCC+AGG | - | chr4.4:15069269-15069288 | None:intergenic | 60.0% | |
| GTCCCCTTCAGCGACTCAAG+TGG | + | chr4.4:15071176-15071195 | MS.gene08995:CDS | 60.0% | |
| TGAGTCGCTGAAGGGGACTC+AGG | - | chr4.4:15071174-15071193 | None:intergenic | 60.0% | |
| TGGGAACCAACCAGCTGGTG+AGG | - | chr4.4:15070947-15070966 | None:intergenic | 60.0% | |
| TGGTAGCCGGCGTGACAGTT+TGG | + | chr4.4:15070552-15070571 | MS.gene08995:CDS | 60.0% | |
| !! | CCGATACCGATTTGGCGCCA+TGG | + | chr4.4:15068455-15068474 | MS.gene08995:intron | 60.0% |
| !! | CGCCTTTAGGACTAGCCACG+TGG | - | chr4.4:15070885-15070904 | None:intergenic | 60.0% |
| !! | GGCAACTGGGGTTCTGGTTC+AGG | + | chr4.4:15070577-15070596 | MS.gene08995:CDS | 60.0% |
| !! | TCGCTGGCATCGACAGAAGC+AGG | + | chr4.4:15070754-15070773 | MS.gene08995:CDS | 60.0% |
| ! | CTACAGCGGATGGCGGTCTG+TGG | + | chr4.4:15068331-15068350 | MS.gene08995:intron | 65.0% |
| GCGGCGCCATGGCGCCAAAT+CGG | - | chr4.4:15068464-15068483 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 15066876 | 15071338 | 15066876 | ID=MS.gene08995 |
| chr4.4 | mRNA | 15066876 | 15071338 | 15066876 | ID=MS.gene08995.t1;Parent=MS.gene08995 |
| chr4.4 | exon | 15066876 | 15066912 | 15066876 | ID=MS.gene08995.t1.exon1;Parent=MS.gene08995.t1 |
| chr4.4 | CDS | 15066876 | 15066912 | 15066876 | ID=cds.MS.gene08995.t1;Parent=MS.gene08995.t1 |
| chr4.4 | exon | 15067121 | 15067291 | 15067121 | ID=MS.gene08995.t1.exon2;Parent=MS.gene08995.t1 |
| chr4.4 | CDS | 15067121 | 15067291 | 15067121 | ID=cds.MS.gene08995.t1;Parent=MS.gene08995.t1 |
| chr4.4 | exon | 15067434 | 15067601 | 15067434 | ID=MS.gene08995.t1.exon3;Parent=MS.gene08995.t1 |
| chr4.4 | CDS | 15067434 | 15067601 | 15067434 | ID=cds.MS.gene08995.t1;Parent=MS.gene08995.t1 |
| chr4.4 | exon | 15068760 | 15070598 | 15068760 | ID=MS.gene08995.t1.exon4;Parent=MS.gene08995.t1 |
| chr4.4 | CDS | 15068760 | 15070598 | 15068760 | ID=cds.MS.gene08995.t1;Parent=MS.gene08995.t1 |
| chr4.4 | exon | 15070692 | 15071338 | 15070692 | ID=MS.gene08995.t1.exon5;Parent=MS.gene08995.t1 |
| chr4.4 | CDS | 15070692 | 15071338 | 15070692 | ID=cds.MS.gene08995.t1;Parent=MS.gene08995.t1 |
| Gene Sequence |
| Protein sequence |
