Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09064.t1 | KEH20256.1 | 95.2 | 84 | 4 | 0 | 103 | 186 | 32 | 115 | 2.40E-37 | 166.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09064.t1 | Q54V77 | 68.1 | 94 | 30 | 0 | 93 | 186 | 99 | 192 | 7.2e-30 | 132.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09064.t1 | G7LJD6 | 95.2 | 84 | 4 | 0 | 103 | 186 | 109 | 192 | 1.8e-37 | 166.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054124 | MS.gene09064 | 0.806793 | 6.92E-50 | -1.69E-46 |
| MS.gene056167 | MS.gene09064 | 0.804201 | 2.42E-49 | -1.69E-46 |
| MS.gene060036 | MS.gene09064 | 0.823485 | 1.35E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09064.t1 | MTR_8g070540 | 94.118 | 85 | 5 | 0 | 102 | 186 | 108 | 192 | 4.59e-48 | 169 |
| MS.gene09064.t1 | MTR_8g070540 | 94.118 | 85 | 5 | 0 | 102 | 186 | 31 | 115 | 8.56e-48 | 169 |
| MS.gene09064.t1 | MTR_8g070540 | 94.118 | 85 | 5 | 0 | 102 | 186 | 108 | 192 | 2.41e-47 | 169 |
| MS.gene09064.t1 | MTR_8g446910 | 77.551 | 98 | 22 | 0 | 89 | 186 | 95 | 192 | 2.79e-43 | 158 |
| MS.gene09064.t1 | MTR_2g062770 | 79.787 | 94 | 19 | 0 | 93 | 186 | 50 | 143 | 4.37e-43 | 157 |
| MS.gene09064.t1 | MTR_2g062770 | 79.787 | 94 | 19 | 0 | 93 | 186 | 99 | 192 | 5.79e-43 | 157 |
| MS.gene09064.t1 | MTR_1g105050 | 88.608 | 79 | 5 | 1 | 187 | 265 | 45 | 119 | 3.69e-36 | 139 |
| MS.gene09064.t1 | MTR_1g087440 | 66.327 | 98 | 33 | 0 | 89 | 186 | 95 | 192 | 7.28e-36 | 136 |
| MS.gene09064.t1 | MTR_1g087440 | 68.085 | 94 | 30 | 0 | 93 | 186 | 99 | 192 | 4.52e-35 | 135 |
| MS.gene09064.t1 | MTR_5g005840 | 45.977 | 87 | 38 | 2 | 180 | 266 | 38 | 115 | 2.81e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09064.t1 | AT4G20320 | 74.490 | 98 | 25 | 0 | 89 | 186 | 46 | 143 | 4.82e-42 | 154 |
| MS.gene09064.t1 | AT4G20320 | 74.490 | 98 | 25 | 0 | 89 | 186 | 95 | 192 | 6.74e-42 | 154 |
| MS.gene09064.t1 | AT4G20320 | 74.490 | 98 | 25 | 0 | 89 | 186 | 95 | 192 | 6.74e-42 | 154 |
| MS.gene09064.t1 | AT4G20320 | 74.490 | 98 | 25 | 0 | 89 | 186 | 95 | 192 | 6.74e-42 | 154 |
| MS.gene09064.t1 | AT4G20320 | 74.490 | 98 | 25 | 0 | 89 | 186 | 95 | 192 | 6.74e-42 | 154 |
| MS.gene09064.t1 | AT4G20320 | 74.490 | 98 | 25 | 0 | 89 | 186 | 95 | 192 | 6.74e-42 | 154 |
| MS.gene09064.t1 | AT1G30820 | 75.510 | 98 | 24 | 0 | 89 | 186 | 95 | 192 | 4.76e-41 | 152 |
| MS.gene09064.t1 | AT4G02120 | 66.327 | 98 | 33 | 0 | 89 | 186 | 95 | 192 | 7.57e-36 | 136 |
| MS.gene09064.t1 | AT4G02120 | 66.327 | 98 | 33 | 0 | 89 | 186 | 95 | 192 | 1.24e-35 | 135 |
| MS.gene09064.t1 | AT4G02120 | 66.327 | 98 | 33 | 0 | 89 | 186 | 95 | 192 | 2.53e-35 | 135 |
| MS.gene09064.t1 | AT4G02120 | 68.085 | 94 | 30 | 0 | 93 | 186 | 99 | 192 | 3.40e-35 | 135 |
| MS.gene09064.t1 | AT4G02120 | 68.085 | 94 | 30 | 0 | 93 | 186 | 99 | 192 | 4.22e-35 | 135 |
| MS.gene09064.t1 | AT3G12670 | 73.404 | 94 | 25 | 0 | 93 | 186 | 99 | 192 | 2.38e-33 | 130 |
| MS.gene09064.t1 | AT2G34890 | 59.596 | 99 | 40 | 0 | 88 | 186 | 94 | 192 | 9.86e-33 | 129 |
| MS.gene09064.t1 | AT3G06010 | 55.556 | 72 | 28 | 1 | 193 | 264 | 79 | 146 | 4.72e-16 | 80.1 |
| MS.gene09064.t1 | AT5G19310 | 52.857 | 70 | 29 | 1 | 195 | 264 | 69 | 134 | 3.06e-13 | 71.6 |
Find 82 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTGCCTGCTTGAACTTTA+TGG | 0.109414 | 4.4:+13925776 | MS.gene09064:CDS |
| TGTCCTAATGCTTGAATAAA+AGG | 0.184572 | 4.4:-13924288 | None:intergenic |
| TTGAAACCTAATGCACATTT+CGG | 0.286770 | 4.4:-13925529 | None:intergenic |
| TGAAACCTAATGCACATTTC+GGG | 0.295111 | 4.4:-13925528 | None:intergenic |
| CTTGGCAAATAAAGTATCTA+AGG | 0.333863 | 4.4:+13922660 | MS.gene09064:CDS |
| ATTGGCCATTGCCAAGGTTC+TGG | 0.352368 | 4.4:-13922749 | None:intergenic |
| ACGAGAGAACAAAGCGTATC+AGG | 0.355852 | 4.4:+13923522 | MS.gene09064:CDS |
| GGCGGTCGCGTTACTGGAAA+TGG | 0.363838 | 4.4:+13927636 | MS.gene09064:CDS |
| TTAACCGGCGGTCGCGTTAC+TGG | 0.374792 | 4.4:+13927630 | MS.gene09064:CDS |
| CAACGCCCGAAATGTGCATT+AGG | 0.375036 | 4.4:+13925523 | MS.gene09064:CDS |
| CAGGGTGATGTAGGGAGTTC+CGG | 0.391298 | 4.4:+13925460 | MS.gene09064:intron |
| TTTACCCTTGAAAGCGATAA+TGG | 0.398843 | 4.4:+13927824 | MS.gene09064:intron |
| AATGGCCAATGAAGTATCTA+AGG | 0.406563 | 4.4:+13922762 | MS.gene09064:CDS |
| TGATGTATGTGTCATAGAAT+TGG | 0.414144 | 4.4:+13924127 | MS.gene09064:CDS |
| TCACCAACAACATTTAAAAC+AGG | 0.420634 | 4.4:-13924671 | None:intergenic |
| TTACTGATGCTATTCAAGAT+TGG | 0.422674 | 4.4:+13924057 | MS.gene09064:CDS |
| GCTACTGTTTGCCTTCAAGC+AGG | 0.428612 | 4.4:+13925735 | MS.gene09064:CDS |
| AAGGATGATGTTGAGGATGA+TGG | 0.434167 | 4.4:+13922679 | MS.gene09064:CDS |
| TTTCATGGATGTTGCTGCAC+TGG | 0.438934 | 4.4:+13927664 | MS.gene09064:CDS |
| TATACTAATTCTTACCTCCT+TGG | 0.439808 | 4.4:-13927742 | None:intergenic |
| TGTTGAGGCATTCAGTTAAC+CGG | 0.440915 | 4.4:+13927615 | MS.gene09064:CDS |
| TGAATAGCATCAGTAATATG+AGG | 0.441372 | 4.4:-13924050 | None:intergenic |
| ATCATCCTTAGATACTTCAT+TGG | 0.444058 | 4.4:-13922767 | None:intergenic |
| AGGTCCTCTCCCCTGCTTGA+AGG | 0.445320 | 4.4:-13925746 | None:intergenic |
| AGGATGATGTTGAGGATGAA+GGG | 0.448436 | 4.4:+13922782 | MS.gene09064:CDS |
| TAGAGTTTCTTTATCTCCAA+TGG | 0.461256 | 4.4:+13927074 | MS.gene09064:intron |
| AGGATGATGTTGAGGATGAT+GGG | 0.469338 | 4.4:+13922680 | MS.gene09064:CDS |
| AAGGATGATGTTGAGGATGA+AGG | 0.469582 | 4.4:+13922781 | MS.gene09064:CDS |
| CTACTGTTTGCCTTCAAGCA+GGG | 0.470134 | 4.4:+13925736 | MS.gene09064:CDS |
| TCGTGAATCCAGGGTGATGT+AGG | 0.475436 | 4.4:+13925451 | MS.gene09064:intron |
| ATCTGTTATTAAATCATCTC+CGG | 0.475680 | 4.4:-13925479 | None:intergenic |
| GCCGTCATCAAAATCAGATT+CGG | 0.478355 | 4.4:+13925572 | MS.gene09064:CDS |
| CAAGCAGGCACTTTGTCTGC+AGG | 0.482300 | 4.4:-13925766 | None:intergenic |
| TTTAAATTGAGTATGGCCAT+TGG | 0.482827 | 4.4:-13927090 | None:intergenic |
| TGCATTAGGTTTCAAGTTGG+AGG | 0.484516 | 4.4:+13925537 | MS.gene09064:CDS |
| GCAAATCTTGCATAGCACTT+TGG | 0.486694 | 4.4:+13927849 | MS.gene09064:CDS |
| GCAACAGGTTTCCTCTGTTG+AGG | 0.486934 | 4.4:+13927600 | MS.gene09064:CDS |
| CTTAGATACTTTATTTGCCA+AGG | 0.489703 | 4.4:-13922659 | None:intergenic |
| CTATTCAAGATTGGATAGAA+AGG | 0.493049 | 4.4:+13924066 | MS.gene09064:CDS |
| TGGAAAACATTACTACATCA+AGG | 0.504130 | 4.4:-13922729 | None:intergenic |
| CTTGCATAGCACTTTGGACA+TGG | 0.504399 | 4.4:+13927855 | MS.gene09064:CDS |
| CGTGAATCCAGGGTGATGTA+GGG | 0.521494 | 4.4:+13925452 | MS.gene09064:intron |
| TCTATGACACATACATCAGC+TGG | 0.524114 | 4.4:-13924122 | None:intergenic |
| TACTTCATTGGCCATTGCCA+AGG | 0.527913 | 4.4:-13922755 | None:intergenic |
| TTTGCCTTCAAGCAGGGGAG+AGG | 0.535192 | 4.4:+13925742 | MS.gene09064:CDS |
| TCGGAAGGTGATGCATCGAT+TGG | 0.540375 | 4.4:-13923454 | None:intergenic |
| TAAGGTGCTTACTTGGCCAA+TGG | 0.545704 | 4.4:-13926313 | None:intergenic |
| ATAGAATTGGGTGGAACCAT+AGG | 0.547655 | 4.4:+13924140 | MS.gene09064:CDS |
| ATTTCCAGTAACGCGACCGC+CGG | 0.548346 | 4.4:-13927634 | None:intergenic |
| TACTGTTTGCCTTCAAGCAG+GGG | 0.549220 | 4.4:+13925737 | MS.gene09064:CDS |
| TTTCAAGTTGGAGGAAGCAA+TGG | 0.555075 | 4.4:+13925546 | MS.gene09064:CDS |
| AGGTGATGCATCGATTGGAC+TGG | 0.555707 | 4.4:-13923449 | None:intergenic |
| CATCGGTTAAATGAGCTTCA+AGG | 0.558068 | 4.4:+13925595 | MS.gene09064:CDS |
| ATAACAGTGGATGGAAAAGA+AGG | 0.558749 | 4.4:+13924098 | MS.gene09064:CDS |
| TAATGCTTGAATAAAAGGCA+TGG | 0.559126 | 4.4:-13924283 | None:intergenic |
| GGACATTTCTTATATAGAGT+AGG | 0.560904 | 4.4:+13924306 | MS.gene09064:CDS |
| GATGTATGTGTCATAGAATT+GGG | 0.563816 | 4.4:+13924128 | MS.gene09064:CDS |
| ATCAAAATCAGATTCGGCAT+CGG | 0.566399 | 4.4:+13925578 | MS.gene09064:CDS |
| TATTCAAGATTGGATAGAAA+GGG | 0.568268 | 4.4:+13924067 | MS.gene09064:CDS |
| GCTTGAACTTTATGGACTGA+AGG | 0.571172 | 4.4:+13925784 | MS.gene09064:CDS |
| ATGTGCATTAGGTTTCAAGT+TGG | 0.572067 | 4.4:+13925534 | MS.gene09064:CDS |
| AGTATCTAAGGATGATGTTG+AGG | 0.575228 | 4.4:+13922672 | MS.gene09064:CDS |
| GTGGCCCACATAACAGTGGA+TGG | 0.595734 | 4.4:+13924089 | MS.gene09064:CDS |
| TCAGTCCATAAAGTTCAAGC+AGG | 0.599564 | 4.4:-13925781 | None:intergenic |
| AAAAGCAACATTACGAAGAG+AGG | 0.600323 | 4.4:+13923485 | MS.gene09064:CDS |
| GGATGATGTTGAGGATGAAG+GGG | 0.606981 | 4.4:+13922783 | MS.gene09064:CDS |
| GGATGATGTTGAGGATGATG+GGG | 0.618233 | 4.4:+13922681 | MS.gene09064:CDS |
| GAATAGCATCAGTAATATGA+GGG | 0.618254 | 4.4:-13924049 | None:intergenic |
| GGAAAACATTACTACATCAA+GGG | 0.629388 | 4.4:-13922728 | None:intergenic |
| TCAAGATTGGATAGAAAGGG+TGG | 0.643735 | 4.4:+13924070 | MS.gene09064:CDS |
| AGTATCTAAGGATGATGTTG+AGG | 0.644610 | 4.4:+13922774 | MS.gene09064:CDS |
| TTAACTCAACTCAACAGCCA+AGG | 0.650527 | 4.4:+13927725 | MS.gene09064:CDS |
| GATGATGTTGAGGATGAAGG+GGG | 0.653899 | 4.4:+13922784 | MS.gene09064:CDS |
| CAACATTTAAAACAGGAACA+AGG | 0.654878 | 4.4:-13924664 | None:intergenic |
| CGTTGCTATAGTAAGAGTCG+TGG | 0.664303 | 4.4:+13922831 | MS.gene09064:CDS |
| GATGATGTTGAGGATGATGG+GGG | 0.674934 | 4.4:+13922682 | MS.gene09064:CDS |
| TGAGGCATTCAGTTAACCGG+CGG | 0.676540 | 4.4:+13927618 | MS.gene09064:CDS |
| TTAACTGAATGCCTCAACAG+AGG | 0.678059 | 4.4:-13927611 | None:intergenic |
| GTATGTGTCATAGAATTGGG+TGG | 0.689147 | 4.4:+13924131 | MS.gene09064:CDS |
| ACTCAACTCAACAGCCAAGG+AGG | 0.690173 | 4.4:+13927728 | MS.gene09064:CDS |
| AAGGGTGGCCCACATAACAG+TGG | 0.694680 | 4.4:+13924085 | MS.gene09064:CDS |
| AAACATTACTACATCAAGGG+CGG | 0.701136 | 4.4:-13922725 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAAAAAAACTATTAAA+AGG | - | chr4.4:13924538-13924557 | None:intergenic | 10.0% |
| !! | TTGAAATCAATTATATTATA+AGG | + | chr4.4:13927221-13927240 | MS.gene09064:intron | 10.0% |
| !! | TTTATTTCATTTATAATATC+AGG | + | chr4.4:13927173-13927192 | MS.gene09064:intron | 10.0% |
| !!! | TTATTTTCTGAAATTATTAT+CGG | + | chr4.4:13925131-13925150 | MS.gene09064:intron | 10.0% |
| !! | AAATCGAATAATTTAATCTA+GGG | + | chr4.4:13923690-13923709 | MS.gene09064:intron | 15.0% |
| !! | AATTTGAATTTAAATTCTTC+TGG | + | chr4.4:13924242-13924261 | MS.gene09064:intron | 15.0% |
| !!! | TATTATTATATTTTGGTGTT+TGG | + | chr4.4:13926808-13926827 | MS.gene09064:intron | 15.0% |
| !!! | TATTTTTGTTTTTACGATAT+AGG | - | chr4.4:13923226-13923245 | None:intergenic | 15.0% |
| !!! | TTTGGCTTATTATTATATTT+TGG | + | chr4.4:13926801-13926820 | MS.gene09064:intron | 15.0% |
| !! | AAAATACACATTTAACATCA+TGG | + | chr4.4:13922940-13922959 | MS.gene09064:intron | 20.0% |
| !! | AAAATATCACTTTCATTTAG+TGG | - | chr4.4:13925681-13925700 | None:intergenic | 20.0% |
| !! | AAACTAGAAAATAAACCAAT+CGG | - | chr4.4:13926257-13926276 | None:intergenic | 20.0% |
| !! | AAATACACATTTAACATCAT+GGG | + | chr4.4:13922941-13922960 | MS.gene09064:intron | 20.0% |
| !! | ATCATACTATTCTTGAAATT+CGG | + | chr4.4:13925242-13925261 | MS.gene09064:intron | 20.0% |
| !! | CTTATAACAAGTAATTCAAA+AGG | - | chr4.4:13926209-13926228 | None:intergenic | 20.0% |
| !! | GAAATCGAATAATTTAATCT+AGG | + | chr4.4:13923689-13923708 | MS.gene09064:intron | 20.0% |
| !! | GAATGTCAATGTTTATTAAT+GGG | + | chr4.4:13926421-13926440 | MS.gene09064:intron | 20.0% |
| !! | TGAATAATTAGAAATAGATC+AGG | + | chr4.4:13927365-13927384 | MS.gene09064:intron | 20.0% |
| !! | TGAATGTCAATGTTTATTAA+TGG | + | chr4.4:13926420-13926439 | MS.gene09064:intron | 20.0% |
| !! | TTAAAAAATATACTTCCACA+AGG | - | chr4.4:13926346-13926365 | None:intergenic | 20.0% |
| !! | TTGATAAATTGTTCACAATT+TGG | + | chr4.4:13926783-13926802 | MS.gene09064:intron | 20.0% |
| !!! | AACAATTTAAAACCAAAGAA+AGG | - | chr4.4:13924363-13924382 | None:intergenic | 20.0% |
| !!! | AAGTTTCTTAGATTTTGAAT+CGG | + | chr4.4:13923649-13923668 | MS.gene09064:intron | 20.0% |
| !!! | AATAGTTTTTTTGTTTTGAG+AGG | + | chr4.4:13924541-13924560 | MS.gene09064:intron | 20.0% |
| !!! | ACAATTTAAAACCAAAGAAA+GGG | - | chr4.4:13924362-13924381 | None:intergenic | 20.0% |
| !!! | ACATACTTTTAAATTGAGTA+TGG | - | chr4.4:13927100-13927119 | None:intergenic | 20.0% |
| !!! | ATTTTTTACATAGATCTCAA+AGG | - | chr4.4:13924725-13924744 | None:intergenic | 20.0% |
| !!! | CTAGTTTATATTTGTAGTTT+TGG | + | chr4.4:13927501-13927520 | MS.gene09064:intron | 20.0% |
| !!! | GGATTAAATATAAACTTGTT+AGG | + | chr4.4:13927776-13927795 | MS.gene09064:intron | 20.0% |
| !!! | TAAAAATTTGTTTTTACCTC+AGG | - | chr4.4:13923186-13923205 | None:intergenic | 20.0% |
| !!! | TAACTTATTTTTACATCAGT+GGG | + | chr4.4:13923151-13923170 | MS.gene09064:intron | 20.0% |
| !!! | TTTGAATTACTTGTTATAAG+AGG | + | chr4.4:13926209-13926228 | MS.gene09064:intron | 20.0% |
| ! | AACAAAAAATGTTCTTCCAT+TGG | + | chr4.4:13926297-13926316 | MS.gene09064:CDS | 25.0% |
| ! | AACAAGTAATTCAAAAGGAA+GGG | - | chr4.4:13926204-13926223 | None:intergenic | 25.0% |
| ! | AACTAGAAAATAAACCAATC+GGG | - | chr4.4:13926256-13926275 | None:intergenic | 25.0% |
| ! | AATACACATTTAACATCATG+GGG | + | chr4.4:13922942-13922961 | MS.gene09064:intron | 25.0% |
| ! | AATTTCCATCTCAAACTATT+GGG | - | chr4.4:13927398-13927417 | None:intergenic | 25.0% |
| ! | ACAAAGATCTTCATGATATA+TGG | + | chr4.4:13923989-13924008 | MS.gene09064:intron | 25.0% |
| ! | AGCACATATATCATAGATTA+TGG | + | chr4.4:13926000-13926019 | MS.gene09064:intron | 25.0% |
| ! | ATATATTTCTTCTATGCCAA+CGG | - | chr4.4:13922902-13922921 | None:intergenic | 25.0% |
| ! | ATCTGTTATTAAATCATCTC+CGG | - | chr4.4:13925482-13925501 | None:intergenic | 25.0% |
| ! | CATTATAGTATATGCACAAA+AGG | + | chr4.4:13925195-13925214 | MS.gene09064:intron | 25.0% |
| ! | GAAATAGTTTCTAATCTGAA+TGG | + | chr4.4:13926443-13926462 | MS.gene09064:intron | 25.0% |
| ! | GCTATTAAAATATGTGGTTT+AGG | + | chr4.4:13927446-13927465 | MS.gene09064:intron | 25.0% |
| ! | GTAAAAGACAAATACAAATG+TGG | - | chr4.4:13927809-13927828 | None:intergenic | 25.0% |
| ! | TAACAAGTAATTCAAAAGGA+AGG | - | chr4.4:13926205-13926224 | None:intergenic | 25.0% |
| ! | TAATGTCTTACAACTCTAAA+TGG | + | chr4.4:13924699-13924718 | MS.gene09064:intron | 25.0% |
| ! | TATTCAAGATTGGATAGAAA+GGG | + | chr4.4:13924067-13924086 | MS.gene09064:CDS | 25.0% |
| ! | TCATACTATTCTTGAAATTC+GGG | + | chr4.4:13925243-13925262 | MS.gene09064:intron | 25.0% |
| ! | TGCATTAATGTCTCTTATTA+TGG | + | chr4.4:13927469-13927488 | MS.gene09064:intron | 25.0% |
| !! | AACTAGAATAAGTTGAACAA+TGG | - | chr4.4:13927707-13927726 | None:intergenic | 25.0% |
| !! | TGTATTTTACCGCAATAAAA+AGG | - | chr4.4:13924414-13924433 | None:intergenic | 25.0% |
| !! | TTAATGTCAATGTTTTCAGA+AGG | + | chr4.4:13926362-13926381 | MS.gene09064:intron | 25.0% |
| !! | TTTAGAGTAGAAAAACATCA+AGG | - | chr4.4:13925866-13925885 | None:intergenic | 25.0% |
| !! | TTTTTATTGCGGTAAAATAC+AGG | + | chr4.4:13924413-13924432 | MS.gene09064:intron | 25.0% |
| !!! | AATGGAAGAACATTTTTTGT+TGG | - | chr4.4:13926298-13926317 | None:intergenic | 25.0% |
| !!! | ATGGTGTTATTTTCTACTTT+AGG | + | chr4.4:13924022-13924041 | MS.gene09064:intron | 25.0% |
| !!! | ATGTCTGTAGATTTTGATAT+TGG | + | chr4.4:13926538-13926557 | MS.gene09064:intron | 25.0% |
| !!! | CTAACTTATTTTTACATCAG+TGG | + | chr4.4:13923150-13923169 | MS.gene09064:intron | 25.0% |
| !!! | GACGTATAAGTTTTAAATTG+TGG | - | chr4.4:13924516-13924535 | None:intergenic | 25.0% |
| !!! | GACTTCTAAAATTGTTATTG+TGG | + | chr4.4:13924471-13924490 | MS.gene09064:intron | 25.0% |
| !!! | GATATATGGTTTTGATGTTA+TGG | + | chr4.4:13924003-13924022 | MS.gene09064:intron | 25.0% |
| !!! | GGTCAACAATTTTAGTAAAA+AGG | + | chr4.4:13925616-13925635 | MS.gene09064:intron | 25.0% |
| !!! | TGGAAGTTTTGAATTCTTTA+AGG | + | chr4.4:13922873-13922892 | MS.gene09064:intron | 25.0% |
| !!! | TGTCTTGCTATTAAAATATG+TGG | + | chr4.4:13927440-13927459 | MS.gene09064:intron | 25.0% |
| !!! | TTGTTTTTACGATATAGGAA+GGG | - | chr4.4:13923221-13923240 | None:intergenic | 25.0% |
| !!! | TTTGTTTTCTGAACATGAAA+AGG | - | chr4.4:13924778-13924797 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTACGATATAGGA+AGG | - | chr4.4:13923222-13923241 | None:intergenic | 25.0% |
| AAAATAAACCAATCGGGATA+TGG | - | chr4.4:13926250-13926269 | None:intergenic | 30.0% | |
| AAGAAGTGAAAAACGAAGAA+GGG | - | chr4.4:13923379-13923398 | None:intergenic | 30.0% | |
| ACTAATACACAAATACCACA+AGG | - | chr4.4:13926494-13926513 | None:intergenic | 30.0% | |
| ACTCTAACCAACATAAATCA+CGG | - | chr4.4:13925388-13925407 | None:intergenic | 30.0% | |
| AGCAAATATACGTGCAATAA+AGG | - | chr4.4:13925647-13925666 | None:intergenic | 30.0% | |
| AGCTGATAGACTATTAGATA+TGG | + | chr4.4:13926565-13926584 | MS.gene09064:intron | 30.0% | |
| ATACACATTTAACATCATGG+GGG | + | chr4.4:13922943-13922962 | MS.gene09064:intron | 30.0% | |
| ATCATCCTTAGATACTTCAT+TGG | - | chr4.4:13922770-13922789 | None:intergenic | 30.0% | |
| ATGTTTCTTTGCTAGCAATA+TGG | - | chr4.4:13926054-13926073 | None:intergenic | 30.0% | |
| ATTTAAATTCTTCTGGATGC+AGG | + | chr4.4:13924249-13924268 | MS.gene09064:intron | 30.0% | |
| CAATTTCCATCTCAAACTAT+TGG | - | chr4.4:13927399-13927418 | None:intergenic | 30.0% | |
| CAGTAAAGTTACAAGACATT+AGG | - | chr4.4:13927537-13927556 | None:intergenic | 30.0% | |
| CGCAATTTAAGTGAAAACTT+TGG | + | chr4.4:13923127-13923146 | MS.gene09064:intron | 30.0% | |
| CTATTCAAGATTGGATAGAA+AGG | + | chr4.4:13924066-13924085 | MS.gene09064:CDS | 30.0% | |
| CTTTAAATTTCCCATCTCTT+TGG | + | chr4.4:13927329-13927348 | MS.gene09064:intron | 30.0% | |
| GAATAGCATCAGTAATATGA+GGG | - | chr4.4:13924052-13924071 | None:intergenic | 30.0% | |
| GATGTATGTGTCATAGAATT+GGG | + | chr4.4:13924128-13924147 | MS.gene09064:CDS | 30.0% | |
| GCTGATAGACTATTAGATAT+GGG | + | chr4.4:13926566-13926585 | MS.gene09064:intron | 30.0% | |
| GGAAAACATTACTACATCAA+GGG | - | chr4.4:13922731-13922750 | None:intergenic | 30.0% | |
| GGACATTTCTTATATAGAGT+AGG | + | chr4.4:13924306-13924325 | MS.gene09064:CDS | 30.0% | |
| GTACACTAAACATTGAAGAA+AGG | - | chr4.4:13925827-13925846 | None:intergenic | 30.0% | |
| GTGCAATGACTAAGTAAAAA+AGG | - | chr4.4:13927125-13927144 | None:intergenic | 30.0% | |
| TAATGCTTGAATAAAAGGCA+TGG | - | chr4.4:13924286-13924305 | None:intergenic | 30.0% | |
| TAGAGTTTCTTTATCTCCAA+TGG | + | chr4.4:13927074-13927093 | MS.gene09064:intron | 30.0% | |
| TATACTAATTCTTACCTCCT+TGG | - | chr4.4:13927745-13927764 | None:intergenic | 30.0% | |
| TGAATAGCATCAGTAATATG+AGG | - | chr4.4:13924053-13924072 | None:intergenic | 30.0% | |
| TGATGTATGTGTCATAGAAT+TGG | + | chr4.4:13924127-13924146 | MS.gene09064:CDS | 30.0% | |
| TGGAAAACATTACTACATCA+AGG | - | chr4.4:13922732-13922751 | None:intergenic | 30.0% | |
| TGTCCTAATGCTTGAATAAA+AGG | - | chr4.4:13924291-13924310 | None:intergenic | 30.0% | |
| TGTTTCTTTGCTAGCAATAT+GGG | - | chr4.4:13926053-13926072 | None:intergenic | 30.0% | |
| TTACTGATGCTATTCAAGAT+TGG | + | chr4.4:13924057-13924076 | MS.gene09064:CDS | 30.0% | |
| TTGAAACCTAATGCACATTT+CGG | - | chr4.4:13925532-13925551 | None:intergenic | 30.0% | |
| TTTAAATTGAGTATGGCCAT+TGG | - | chr4.4:13927093-13927112 | None:intergenic | 30.0% | |
| ! | ATAGTTTGAGATGGAAATTG+TGG | + | chr4.4:13927399-13927418 | MS.gene09064:intron | 30.0% |
| ! | ATGCCTTTTATTCAAGCATT+AGG | + | chr4.4:13924285-13924304 | MS.gene09064:CDS | 30.0% |
| ! | CAACATTTAAAACAGGAACA+AGG | - | chr4.4:13924667-13924686 | None:intergenic | 30.0% |
| ! | CAATTATGCACTGATGTAAA+TGG | - | chr4.4:13923076-13923095 | None:intergenic | 30.0% |
| ! | CTATGTGTGTTATTGCATAT+TGG | + | chr4.4:13926887-13926906 | MS.gene09064:intron | 30.0% |
| ! | CTTAGATACTTTATTTGCCA+AGG | - | chr4.4:13922662-13922681 | None:intergenic | 30.0% |
| ! | CTTGGCAAATAAAGTATCTA+AGG | + | chr4.4:13922660-13922679 | MS.gene09064:CDS | 30.0% |
| ! | GTTTCAATCTGAAGTATATG+TGG | - | chr4.4:13925060-13925079 | None:intergenic | 30.0% |
| ! | TCAATGTTTTCAGAAGGAAT+TGG | + | chr4.4:13926368-13926387 | MS.gene09064:intron | 30.0% |
| ! | TCACCAACAACATTTAAAAC+AGG | - | chr4.4:13924674-13924693 | None:intergenic | 30.0% |
| !! | ATATTTTTGCGAGTGATTGT+TGG | + | chr4.4:13927559-13927578 | MS.gene09064:intron | 30.0% |
| !! | GTTCCTGTTTTAAATGTTGT+TGG | + | chr4.4:13924668-13924687 | MS.gene09064:CDS | 30.0% |
| !! | TGTTTTCAAGATTGTACCTA+TGG | - | chr4.4:13924159-13924178 | None:intergenic | 30.0% |
| !! | TTCTATTTTTCGTGAATCCA+GGG | + | chr4.4:13925442-13925461 | MS.gene09064:intron | 30.0% |
| !! | TTTCTATTTTTCGTGAATCC+AGG | + | chr4.4:13925441-13925460 | MS.gene09064:intron | 30.0% |
| !!! | CATTTTTTGTTGGTTCTATG+AGG | - | chr4.4:13926288-13926307 | None:intergenic | 30.0% |
| !!! | GTTTTGATTGTCATGTGTTT+TGG | + | chr4.4:13925270-13925289 | MS.gene09064:intron | 30.0% |
| !!! | TTTTAGTTTTCACATCAGCA+GGG | + | chr4.4:13922966-13922985 | MS.gene09064:intron | 30.0% |
| !!! | TTTTTCAGGTTTTTTGCAAC+AGG | + | chr4.4:13927585-13927604 | MS.gene09064:intron | 30.0% |
| AAAAGCAACATTACGAAGAG+AGG | + | chr4.4:13923485-13923504 | MS.gene09064:CDS | 35.0% | |
| AAACATTACTACATCAAGGG+CGG | - | chr4.4:13922728-13922747 | None:intergenic | 35.0% | |
| AATGTGGCAAAACATTTGAC+AGG | - | chr4.4:13923901-13923920 | None:intergenic | 35.0% | |
| ACGATGAAAAGTAAGCAAGA+TGG | - | chr4.4:13926148-13926167 | None:intergenic | 35.0% | |
| AGTAAGTTCAAACCCAAAAG+TGG | - | chr4.4:13925974-13925993 | None:intergenic | 35.0% | |
| AGTATCTAAGGATGATGTTG+AGG | + | chr4.4:13922672-13922691 | MS.gene09064:CDS | 35.0% | |
| AGTTGGCATAAGCAAATGAA+GGG | + | chr4.4:13923032-13923051 | MS.gene09064:intron | 35.0% | |
| ATAACAGTGGATGGAAAAGA+AGG | + | chr4.4:13924098-13924117 | MS.gene09064:CDS | 35.0% | |
| ATAATCTCTCTCCAAACAAC+GGG | - | chr4.4:13926175-13926194 | None:intergenic | 35.0% | |
| ATAATTAGCCATATCCCGAT+TGG | + | chr4.4:13926239-13926258 | MS.gene09064:intron | 35.0% | |
| ATCAAAATCAGATTCGGCAT+CGG | + | chr4.4:13925578-13925597 | MS.gene09064:CDS | 35.0% | |
| ATGTGGCAAAACATTTGACA+GGG | - | chr4.4:13923900-13923919 | None:intergenic | 35.0% | |
| CAAATGTACCAGTGTTGTAA+CGG | - | chr4.4:13925095-13925114 | None:intergenic | 35.0% | |
| CAATCTTGAAAACATTCCTC+AGG | + | chr4.4:13924165-13924184 | MS.gene09064:intron | 35.0% | |
| CAATGAACCTGTTTACAATG+TGG | - | chr4.4:13923917-13923936 | None:intergenic | 35.0% | |
| CAATTTCATCACGCATTGTT+TGG | + | chr4.4:13923555-13923574 | MS.gene09064:intron | 35.0% | |
| CAGTGCATAATTGAGATGAA+GGG | + | chr4.4:13923083-13923102 | MS.gene09064:intron | 35.0% | |
| CATAATCTCTCTCCAAACAA+CGG | - | chr4.4:13926176-13926195 | None:intergenic | 35.0% | |
| CGATGAAAAGTAAGCAAGAT+GGG | - | chr4.4:13926147-13926166 | None:intergenic | 35.0% | |
| CTTCTTCGATCAATCTGTAA+GGG | + | chr4.4:13923396-13923415 | MS.gene09064:intron | 35.0% | |
| GAAGAAGAAGTGAAAAAGTG+AGG | - | chr4.4:13923274-13923293 | None:intergenic | 35.0% | |
| GAAGAAGTGAAAAACGAAGA+AGG | - | chr4.4:13923380-13923399 | None:intergenic | 35.0% | |
| GAAGAGATTGTCAAAACTGA+GGG | + | chr4.4:13926677-13926696 | MS.gene09064:intron | 35.0% | |
| GACTAAGATCTTTAACCTTG+TGG | + | chr4.4:13926476-13926495 | MS.gene09064:intron | 35.0% | |
| GTAAGTTCAAACCCAAAAGT+GGG | - | chr4.4:13925973-13925992 | None:intergenic | 35.0% | |
| GTTATCCTGCATAGAACAAA+AGG | - | chr4.4:13926868-13926887 | None:intergenic | 35.0% | |
| TAAGTCAGTTCATCGAAGAT+TGG | - | chr4.4:13926630-13926649 | None:intergenic | 35.0% | |
| TAAGTTCAAACCCAAAAGTG+GGG | - | chr4.4:13925972-13925991 | None:intergenic | 35.0% | |
| TACAAAGTTTGCCCTTTCTT+TGG | + | chr4.4:13924348-13924367 | MS.gene09064:intron | 35.0% | |
| TCAGTGCATAATTGAGATGA+AGG | + | chr4.4:13923082-13923101 | MS.gene09064:intron | 35.0% | |
| TCTACGCATTTGGATGTAAA+GGG | - | chr4.4:13923822-13923841 | None:intergenic | 35.0% | |
| TCTTCTTCGATCAATCTGTA+AGG | + | chr4.4:13923395-13923414 | MS.gene09064:intron | 35.0% | |
| TGAAACCTAATGCACATTTC+GGG | - | chr4.4:13925531-13925550 | None:intergenic | 35.0% | |
| TGTTACGTATGTTCATTTGC+AGG | + | chr4.4:13924611-13924630 | MS.gene09064:intron | 35.0% | |
| TTACGATATAGGAAGGGATA+AGG | - | chr4.4:13923215-13923234 | None:intergenic | 35.0% | |
| TTCGATTGAGAATTGCGATT+GGG | - | chr4.4:13923340-13923359 | None:intergenic | 35.0% | |
| TTTACCCTTGAAAGCGATAA+TGG | + | chr4.4:13927824-13927843 | MS.gene09064:intron | 35.0% | |
| ! | AATGGCCAATGAAGTATCTA+AGG | + | chr4.4:13922762-13922781 | MS.gene09064:CDS | 35.0% |
| ! | AGTAATGTTTTCCAGAACCT+TGG | + | chr4.4:13922738-13922757 | MS.gene09064:CDS | 35.0% |
| ! | ATGTGCATTAGGTTTCAAGT+TGG | + | chr4.4:13925534-13925553 | MS.gene09064:CDS | 35.0% |
| ! | ATTCACCTTTTGTTCTATGC+AGG | + | chr4.4:13926860-13926879 | MS.gene09064:intron | 35.0% |
| ! | ATTGAGTTAAGGTGCTTACT+TGG | - | chr4.4:13926323-13926342 | None:intergenic | 35.0% |
| ! | CTGGAAATGGAAGTTTTTCA+TGG | + | chr4.4:13927649-13927668 | MS.gene09064:CDS | 35.0% |
| ! | CTTTTCTTTGTAGTGAGCAT+TGG | + | chr4.4:13927293-13927312 | MS.gene09064:intron | 35.0% |
| ! | GAATTCTTTAAGGATACCGT+TGG | + | chr4.4:13922883-13922902 | MS.gene09064:intron | 35.0% |
| ! | GTGCACATTTGTTGATATGT+AGG | - | chr4.4:13925030-13925049 | None:intergenic | 35.0% |
| ! | GTGTGTTATTGCATATTGGT+GGG | + | chr4.4:13926891-13926910 | MS.gene09064:intron | 35.0% |
| ! | TGTGTGTTATTGCATATTGG+TGG | + | chr4.4:13926890-13926909 | MS.gene09064:intron | 35.0% |
| ! | TGTTTTGCCACATTGTAAAC+AGG | + | chr4.4:13923907-13923926 | MS.gene09064:intron | 35.0% |
| ! | TTTTCCATCCACTGTTATGT+GGG | - | chr4.4:13924096-13924115 | None:intergenic | 35.0% |
| !! | AACAAGCTTTGAGGAGAAAA+GGG | - | chr4.4:13923874-13923893 | None:intergenic | 35.0% |
| !! | ACATTGATTTGCCATTGATG+TGG | + | chr4.4:13926991-13927010 | MS.gene09064:intron | 35.0% |
| !! | CATTGATTTGCCATTGATGT+GGG | + | chr4.4:13926992-13927011 | MS.gene09064:intron | 35.0% |
| !! | GTGTGAGTTTTAACATCAGT+TGG | + | chr4.4:13923015-13923034 | MS.gene09064:intron | 35.0% |
| !!! | ATGTTGCTTTTCGTTTGAGT+CGG | - | chr4.4:13923476-13923495 | None:intergenic | 35.0% |
| !!! | GTTTTAGTTTTCACATCAGC+AGG | + | chr4.4:13922965-13922984 | MS.gene09064:intron | 35.0% |
| AAAACTGAGGGACCTTATGA+GGG | + | chr4.4:13926689-13926708 | MS.gene09064:intron | 40.0% | |
| AAATTTCCCATCTCTTTGGC+TGG | + | chr4.4:13927333-13927352 | MS.gene09064:intron | 40.0% | |
| AAGGATGATGTTGAGGATGA+AGG | + | chr4.4:13922679-13922698 | MS.gene09064:CDS | 40.0% | |
| AAGGATGATGTTGAGGATGA+TGG | + | chr4.4:13922679-13922698 | MS.gene09064:CDS | 40.0% | |
| AAGTGCCTGCTTGAACTTTA+TGG | + | chr4.4:13925776-13925795 | MS.gene09064:CDS | 40.0% | |
| AAGTTCAAACCCAAAAGTGG+GGG | - | chr4.4:13925971-13925990 | None:intergenic | 40.0% | |
| AGGATGATGTTGAGGATGAA+GGG | + | chr4.4:13922782-13922801 | MS.gene09064:CDS | 40.0% | |
| AGGATGATGTTGAGGATGAT+GGG | + | chr4.4:13922680-13922699 | MS.gene09064:CDS | 40.0% | |
| AGTGAAAAACGAAGAAGGGT+TGG | - | chr4.4:13923375-13923394 | None:intergenic | 40.0% | |
| AGTGTGCACAACAAAGCTAT+AGG | - | chr4.4:13925327-13925346 | None:intergenic | 40.0% | |
| ATAGAATTGGGTGGAACCAT+AGG | + | chr4.4:13924140-13924159 | MS.gene09064:CDS | 40.0% | |
| CAGCAGGGAAAATATCTGAA+GGG | + | chr4.4:13922981-13923000 | MS.gene09064:intron | 40.0% | |
| CAGTTGGCATAAGCAAATGA+AGG | + | chr4.4:13923031-13923050 | MS.gene09064:intron | 40.0% | |
| CTCAAACTTCAACCCTCATA+AGG | - | chr4.4:13926704-13926723 | None:intergenic | 40.0% | |
| CTTCCACAAGGATTGAGTTA+AGG | - | chr4.4:13926334-13926353 | None:intergenic | 40.0% | |
| GATTGGGAATTGTGATTGGA+CGG | - | chr4.4:13923324-13923343 | None:intergenic | 40.0% | |
| GCAAATCTTGCATAGCACTT+TGG | + | chr4.4:13927849-13927868 | MS.gene09064:CDS | 40.0% | |
| GCCGTCATCAAAATCAGATT+CGG | + | chr4.4:13925572-13925591 | MS.gene09064:CDS | 40.0% | |
| GCTACTACATAGCTGCAATA+CGG | - | chr4.4:13927019-13927038 | None:intergenic | 40.0% | |
| GGAAGAGATTGTCAAAACTG+AGG | + | chr4.4:13926676-13926695 | MS.gene09064:intron | 40.0% | |
| GTATGTGTCATAGAATTGGG+TGG | + | chr4.4:13924131-13924150 | MS.gene09064:CDS | 40.0% | |
| GTCTACGCATTTGGATGTAA+AGG | - | chr4.4:13923823-13923842 | None:intergenic | 40.0% | |
| GTTCGATTGAGAATTGCGAT+TGG | - | chr4.4:13923341-13923360 | None:intergenic | 40.0% | |
| TACATCCAAATGCGTAGACA+CGG | + | chr4.4:13923824-13923843 | MS.gene09064:intron | 40.0% | |
| TACCGCAATAAAAAGGCTTC+CGG | - | chr4.4:13924407-13924426 | None:intergenic | 40.0% | |
| TCAAGATTGGATAGAAAGGG+TGG | + | chr4.4:13924070-13924089 | MS.gene09064:CDS | 40.0% | |
| TCAGCAGGGAAAATATCTGA+AGG | + | chr4.4:13922980-13922999 | MS.gene09064:intron | 40.0% | |
| TCAGTCCATAAAGTTCAAGC+AGG | - | chr4.4:13925784-13925803 | None:intergenic | 40.0% | |
| TCAGTTCATCGAAGATTGGA+CGG | - | chr4.4:13926626-13926645 | None:intergenic | 40.0% | |
| TCCATCTCAAACTATTGGGA+AGG | - | chr4.4:13927394-13927413 | None:intergenic | 40.0% | |
| TCTATGACACATACATCAGC+TGG | - | chr4.4:13924125-13924144 | None:intergenic | 40.0% | |
| TGAGATGGAAATTGTGGATG+TGG | + | chr4.4:13927405-13927424 | MS.gene09064:intron | 40.0% | |
| TGCTACTCAAACTCATGTTG+TGG | + | chr4.4:13926655-13926674 | MS.gene09064:intron | 40.0% | |
| TTAACTCAACTCAACAGCCA+AGG | + | chr4.4:13927725-13927744 | MS.gene09064:CDS | 40.0% | |
| TTAACTGAATGCCTCAACAG+AGG | - | chr4.4:13927614-13927633 | None:intergenic | 40.0% | |
| TTGCGATTGGGAATTGTGAT+TGG | - | chr4.4:13923328-13923347 | None:intergenic | 40.0% | |
| TTGTGTGCCGTGATTTATGT+TGG | + | chr4.4:13925378-13925397 | MS.gene09064:intron | 40.0% | |
| ! | AAGGGAAAGTGTGTTTACCA+AGG | - | chr4.4:13923856-13923875 | None:intergenic | 40.0% |
| ! | AGGTGCTAACAACTTTTGCT+TGG | + | chr4.4:13924631-13924650 | MS.gene09064:intron | 40.0% |
| ! | CATCGGTTAAATGAGCTTCA+AGG | + | chr4.4:13925595-13925614 | MS.gene09064:CDS | 40.0% |
| ! | CGCATTGTTTGGTTCAGATT+TGG | + | chr4.4:13923566-13923585 | MS.gene09064:intron | 40.0% |
| ! | CTTTTCCATCCACTGTTATG+TGG | - | chr4.4:13924097-13924116 | None:intergenic | 40.0% |
| ! | GCATTGTTTGCATCTTTTCG+TGG | + | chr4.4:13922853-13922872 | MS.gene09064:intron | 40.0% |
| ! | GCTTGAACTTTATGGACTGA+AGG | + | chr4.4:13925784-13925803 | MS.gene09064:CDS | 40.0% |
| ! | TGTTGAGGCATTCAGTTAAC+CGG | + | chr4.4:13927615-13927634 | MS.gene09064:CDS | 40.0% |
| !! | GAACAAGCTTTGAGGAGAAA+AGG | - | chr4.4:13923875-13923894 | None:intergenic | 40.0% |
| !! | GCCGAATCTGATTTTGATGA+CGG | - | chr4.4:13925576-13925595 | None:intergenic | 40.0% |
| !! | TCATCGTTTTTCCCGTTGTT+TGG | + | chr4.4:13926161-13926180 | MS.gene09064:intron | 40.0% |
| !! | TGCATTAGGTTTCAAGTTGG+AGG | + | chr4.4:13925537-13925556 | MS.gene09064:CDS | 40.0% |
| !! | TTTCAAGTTGGAGGAAGCAA+TGG | + | chr4.4:13925546-13925565 | MS.gene09064:CDS | 40.0% |
| !!! | GTGATTGTTGGCTCTTTTTC+AGG | + | chr4.4:13927571-13927590 | MS.gene09064:intron | 40.0% |
| !!! | TGTGGCTGCAATTTTAGTTG+TGG | + | chr4.4:13924489-13924508 | MS.gene09064:intron | 40.0% |
| ACAGGGAAGAACAAGCTTTG+AGG | - | chr4.4:13923883-13923902 | None:intergenic | 45.0% | |
| ACATTCCTCAGGCTTCTTCA+TGG | + | chr4.4:13924176-13924195 | MS.gene09064:intron | 45.0% | |
| ACGAGAGAACAAAGCGTATC+AGG | + | chr4.4:13923522-13923541 | MS.gene09064:CDS | 45.0% | |
| AGATTTGTGGAGTCAGTCCT+TGG | - | chr4.4:13924834-13924853 | None:intergenic | 45.0% | |
| AGTTCAAACCCAAAAGTGGG+GGG | - | chr4.4:13925970-13925989 | None:intergenic | 45.0% | |
| CAAAACTGAGGGACCTTATG+AGG | + | chr4.4:13926688-13926707 | MS.gene09064:intron | 45.0% | |
| CGTTGCTATAGTAAGAGTCG+TGG | + | chr4.4:13922831-13922850 | MS.gene09064:CDS | 45.0% | |
| CTACTGTTTGCCTTCAAGCA+GGG | + | chr4.4:13925736-13925755 | MS.gene09064:CDS | 45.0% | |
| CTTGCATAGCACTTTGGACA+TGG | + | chr4.4:13927855-13927874 | MS.gene09064:CDS | 45.0% | |
| GAGATGAAGGGAAAAACACG+CGG | + | chr4.4:13923095-13923114 | MS.gene09064:intron | 45.0% | |
| GAGGAACGAAGAAGAAGTGA+GGG | - | chr4.4:13923255-13923274 | None:intergenic | 45.0% | |
| GATGATGTTGAGGATGAAGG+GGG | + | chr4.4:13922784-13922803 | MS.gene09064:CDS | 45.0% | |
| GCACCTTAACTCAATCCTTG+TGG | + | chr4.4:13926328-13926347 | MS.gene09064:intron | 45.0% | |
| GCCTTCCCAATAGTTTGAGA+TGG | + | chr4.4:13927390-13927409 | MS.gene09064:intron | 45.0% | |
| GCTGCCATTATCGCTTTCAA+GGG | - | chr4.4:13927831-13927850 | None:intergenic | 45.0% | |
| GGATGATGTTGAGGATGAAG+GGG | + | chr4.4:13922783-13922802 | MS.gene09064:CDS | 45.0% | |
| GGATGATGTTGAGGATGATG+GGG | + | chr4.4:13922681-13922700 | MS.gene09064:CDS | 45.0% | |
| TAACACCGTGTCTACGCATT+TGG | - | chr4.4:13923832-13923851 | None:intergenic | 45.0% | |
| TACTGTTTGCCTTCAAGCAG+GGG | + | chr4.4:13925737-13925756 | MS.gene09064:CDS | 45.0% | |
| TACTTCATTGGCCATTGCCA+AGG | - | chr4.4:13922758-13922777 | None:intergenic | 45.0% | |
| TCGTATGTCCGTTACAACAC+TGG | + | chr4.4:13925084-13925103 | MS.gene09064:intron | 45.0% | |
| TCTAACCATGAAGAAGCCTG+AGG | - | chr4.4:13924184-13924203 | None:intergenic | 45.0% | |
| TGAGGAACGAAGAAGAAGTG+AGG | - | chr4.4:13923256-13923275 | None:intergenic | 45.0% | |
| TGCTGCCATTATCGCTTTCA+AGG | - | chr4.4:13927832-13927851 | None:intergenic | 45.0% | |
| TTTCATGGATGTTGCTGCAC+TGG | + | chr4.4:13927664-13927683 | MS.gene09064:CDS | 45.0% | |
| ! | AGGACTGACTCCACAAATCT+TGG | + | chr4.4:13924834-13924853 | MS.gene09064:intron | 45.0% |
| ! | CACCGGAAGCCTTTTTATTG+CGG | + | chr4.4:13924402-13924421 | MS.gene09064:intron | 45.0% |
| ! | GATGATGTTGAGGATGATGG+GGG | + | chr4.4:13922682-13922701 | MS.gene09064:CDS | 45.0% |
| ! | GTTTTCCAGAACCTTGGCAA+TGG | + | chr4.4:13922744-13922763 | MS.gene09064:CDS | 45.0% |
| ! | TAAGGTGCTTACTTGGCCAA+TGG | - | chr4.4:13926316-13926335 | None:intergenic | 45.0% |
| ! | TGCTTTTCGTTTGAGTCGGA+AGG | - | chr4.4:13923472-13923491 | None:intergenic | 45.0% |
| !!! | AATTAGTATATTTTATTTAT+TGG | + | chr4.4:13927755-13927774 | MS.gene09064:intron | 5.0% |
| ACTCAACTCAACAGCCAAGG+AGG | + | chr4.4:13927728-13927747 | MS.gene09064:CDS | 50.0% | |
| AGAGAGTGACCATTGTGCTG+CGG | - | chr4.4:13924864-13924883 | None:intergenic | 50.0% | |
| AGCAAGATGGGAACTGCACA+AGG | - | chr4.4:13926135-13926154 | None:intergenic | 50.0% | |
| ATGAAGGGAAAAACACGCGG+TGG | + | chr4.4:13923098-13923117 | MS.gene09064:intron | 50.0% | |
| ATGCAGACCAGCCAAAGAGA+TGG | - | chr4.4:13927343-13927362 | None:intergenic | 50.0% | |
| ATTGGCCATTGCCAAGGTTC+TGG | - | chr4.4:13922752-13922771 | None:intergenic | 50.0% | |
| CAACGCCCGAAATGTGCATT+AGG | + | chr4.4:13925523-13925542 | MS.gene09064:CDS | 50.0% | |
| CCAACACAGCATAGTGTGAG+AGG | + | chr4.4:13924799-13924818 | MS.gene09064:intron | 50.0% | |
| CCTCTCACACTATGCTGTGT+TGG | - | chr4.4:13924802-13924821 | None:intergenic | 50.0% | |
| CGTGAATCCAGGGTGATGTA+GGG | + | chr4.4:13925452-13925471 | MS.gene09064:intron | 50.0% | |
| GAACGAAGAAGAAGTGAGGG+TGG | - | chr4.4:13923252-13923271 | None:intergenic | 50.0% | |
| GAATTGTGATTGGACGGTGG+TGG | - | chr4.4:13923318-13923337 | None:intergenic | 50.0% | |
| GCAACAGGTTTCCTCTGTTG+AGG | + | chr4.4:13927600-13927619 | MS.gene09064:CDS | 50.0% | |
| GCAATACGGTCCCACATCAA+TGG | - | chr4.4:13927005-13927024 | None:intergenic | 50.0% | |
| GCTACTGTTTGCCTTCAAGC+AGG | + | chr4.4:13925735-13925754 | MS.gene09064:CDS | 50.0% | |
| GTGAGAGGACTTAGAAGCCA+AGG | + | chr4.4:13924814-13924833 | MS.gene09064:intron | 50.0% | |
| GTTCAAACCCAAAAGTGGGG+GGG | - | chr4.4:13925969-13925988 | None:intergenic | 50.0% | |
| TCGTGAATCCAGGGTGATGT+AGG | + | chr4.4:13925451-13925470 | MS.gene09064:intron | 50.0% | |
| TGCAGACCAGCCAAAGAGAT+GGG | - | chr4.4:13927342-13927361 | None:intergenic | 50.0% | |
| TGGGAATTGTGATTGGACGG+TGG | - | chr4.4:13923321-13923340 | None:intergenic | 50.0% | |
| TTGTAGTCCATCCCACGTAG+CGG | + | chr4.4:13925903-13925922 | MS.gene09064:intron | 50.0% | |
| ! | AGAAGGGTTGGCGTTGTGTT+TGG | - | chr4.4:13923363-13923382 | None:intergenic | 50.0% |
| ! | ATGAAGGGGGTCTGTCACTT+TGG | + | chr4.4:13922797-13922816 | MS.gene09064:CDS | 50.0% |
| ! | ATGATGGGGGTCTGTCACTT+GGG | + | chr4.4:13922695-13922714 | MS.gene09064:CDS | 50.0% |
| ! | TCGGAAGGTGATGCATCGAT+TGG | - | chr4.4:13923457-13923476 | None:intergenic | 50.0% |
| ! | TGAGGCATTCAGTTAACCGG+CGG | + | chr4.4:13927618-13927637 | MS.gene09064:CDS | 50.0% |
| !! | AGGTGATGCATCGATTGGAC+TGG | - | chr4.4:13923452-13923471 | None:intergenic | 50.0% |
| !! | CGTAGACACGGTGTTATCCT+TGG | + | chr4.4:13923836-13923855 | MS.gene09064:intron | 50.0% |
| !! | TACGTGGGATGGACTACAAC+AGG | - | chr4.4:13925902-13925921 | None:intergenic | 50.0% |
| !!! | GCTGCACTGGTTTTTTGCAC+TGG | + | chr4.4:13927677-13927696 | MS.gene09064:CDS | 50.0% |
| AAGGGTGGCCCACATAACAG+TGG | + | chr4.4:13924085-13924104 | MS.gene09064:CDS | 55.0% | |
| ACCTCAGAATCCCGCTACGT+GGG | - | chr4.4:13925917-13925936 | None:intergenic | 55.0% | |
| ATTTCCAGTAACGCGACCGC+CGG | - | chr4.4:13927637-13927656 | None:intergenic | 55.0% | |
| CAAGCAGGCACTTTGTCTGC+AGG | - | chr4.4:13925769-13925788 | None:intergenic | 55.0% | |
| CAGGGTGATGTAGGGAGTTC+CGG | + | chr4.4:13925460-13925479 | MS.gene09064:intron | 55.0% | |
| CAGTGGGTGAGAAATGCCTG+AGG | + | chr4.4:13923167-13923186 | MS.gene09064:intron | 55.0% | |
| CTGCGGCAAGCCAAGATTTG+TGG | - | chr4.4:13924847-13924866 | None:intergenic | 55.0% | |
| GTGGCCCACATAACAGTGGA+TGG | + | chr4.4:13924089-13924108 | MS.gene09064:CDS | 55.0% | |
| TGTAGTCCATCCCACGTAGC+GGG | + | chr4.4:13925904-13925923 | MS.gene09064:intron | 55.0% | |
| TTCCGGTGCAAACGCTGTTG+CGG | - | chr4.4:13924390-13924409 | None:intergenic | 55.0% | |
| TTTGCCTTCAAGCAGGGGAG+AGG | + | chr4.4:13925742-13925761 | MS.gene09064:CDS | 55.0% | |
| ! | AATTGCCTCCCCCCCACTTT+TGG | + | chr4.4:13925958-13925977 | MS.gene09064:intron | 55.0% |
| !! | ATTGCCTCCCCCCCACTTTT+GGG | + | chr4.4:13925959-13925978 | MS.gene09064:intron | 55.0% |
| !! | GATGATGGGGGTCTGTCACT+TGG | + | chr4.4:13922694-13922713 | MS.gene09064:CDS | 55.0% |
| !! | GGTGGTGGACGATTCGGAAT+TGG | - | chr4.4:13923303-13923322 | None:intergenic | 55.0% |
| !! | TTGGACGGTGGTGGACGATT+CGG | - | chr4.4:13923309-13923328 | None:intergenic | 55.0% |
| AAGTGGGGGGGAGGCAATTC+TGG | - | chr4.4:13925957-13925976 | None:intergenic | 60.0% | |
| AGCCGCAACAGCGTTTGCAC+CGG | + | chr4.4:13924385-13924404 | MS.gene09064:intron | 60.0% | |
| AGGTCCTCTCCCCTGCTTGA+AGG | - | chr4.4:13925749-13925768 | None:intergenic | 60.0% | |
| CAAACCCAAAAGTGGGGGGG+AGG | - | chr4.4:13925966-13925985 | None:intergenic | 60.0% | |
| CACCTCAGAATCCCGCTACG+TGG | - | chr4.4:13925918-13925937 | None:intergenic | 60.0% | |
| CAGAATCCCGCTACGTGGGA+TGG | - | chr4.4:13925913-13925932 | None:intergenic | 60.0% | |
| CGGAACTCCCTACATCACCC+TGG | - | chr4.4:13925462-13925481 | None:intergenic | 60.0% | |
| GGCGGTCGCGTTACTGGAAA+TGG | + | chr4.4:13927636-13927655 | MS.gene09064:CDS | 60.0% | |
| TTAACCGGCGGTCGCGTTAC+TGG | + | chr4.4:13927630-13927649 | MS.gene09064:CDS | 60.0% | |
| ! | TCCCACGTAGCGGGATTCTG+AGG | + | chr4.4:13925913-13925932 | MS.gene09064:intron | 60.0% |
| !! | CTTGGCTTGCCGCAGCACAA+TGG | + | chr4.4:13924852-13924871 | MS.gene09064:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 13922646 | 13927904 | 13922646 | ID=MS.gene09064 |
| chr4.4 | mRNA | 13922646 | 13927904 | 13922646 | ID=MS.gene09064.t1;Parent=MS.gene09064 |
| chr4.4 | exon | 13922646 | 13922857 | 13922646 | ID=MS.gene09064.t1.exon1;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13922646 | 13922857 | 13922646 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13923438 | 13923543 | 13923438 | ID=MS.gene09064.t1.exon2;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13923438 | 13923543 | 13923438 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13924044 | 13924161 | 13924044 | ID=MS.gene09064.t1.exon3;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13924044 | 13924161 | 13924044 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13924271 | 13924327 | 13924271 | ID=MS.gene09064.t1.exon4;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13924271 | 13924327 | 13924271 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13924633 | 13924697 | 13924633 | ID=MS.gene09064.t1.exon5;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13924633 | 13924697 | 13924633 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13925463 | 13925616 | 13925463 | ID=MS.gene09064.t1.exon6;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13925463 | 13925616 | 13925463 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13925729 | 13925805 | 13925729 | ID=MS.gene09064.t1.exon7;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13925729 | 13925805 | 13925729 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13926274 | 13926323 | 13926274 | ID=MS.gene09064.t1.exon8;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13926274 | 13926323 | 13926274 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13927077 | 13927113 | 13927077 | ID=MS.gene09064.t1.exon9;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13927077 | 13927113 | 13927077 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13927593 | 13927698 | 13927593 | ID=MS.gene09064.t1.exon10;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13927593 | 13927698 | 13927593 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13927725 | 13927749 | 13927725 | ID=MS.gene09064.t1.exon11;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13927725 | 13927749 | 13927725 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| chr4.4 | exon | 13927838 | 13927904 | 13927838 | ID=MS.gene09064.t1.exon12;Parent=MS.gene09064.t1 |
| chr4.4 | CDS | 13927838 | 13927904 | 13927838 | ID=cds.MS.gene09064.t1;Parent=MS.gene09064.t1 |
| Gene Sequence |
| Protein sequence |
