Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09268.t1 | XP_003629613.1 | 100 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 2.40E-84 | 321.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09268.t1 | Q65WT0 | 88.3 | 145 | 17 | 0 | 1 | 145 | 1 | 145 | 3.4e-79 | 295.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09268.t1 | G7LH30 | 100.0 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 1.7e-84 | 321.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09268 | MS.gene83541 | PPI |
| MS.gene067412 | MS.gene09268 | PPI |
| MS.gene09268 | MS.gene86409 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09268.t1 | MTR_8g083120 | 100.000 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 2.02e-107 | 302 |
| MS.gene09268.t1 | MTR_4g117260 | 96.552 | 145 | 5 | 0 | 1 | 145 | 1 | 145 | 2.37e-104 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09268.t1 | AT4G21110 | 87.586 | 145 | 18 | 0 | 1 | 145 | 1 | 145 | 1.22e-96 | 275 |
| MS.gene09268.t1 | AT4G21110 | 87.586 | 145 | 18 | 0 | 1 | 145 | 1 | 145 | 1.22e-96 | 275 |
Find 43 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAAAATGCGAGACTTTA+TGG | 0.169673 | 4.1:+14536986 | MS.gene09268:CDS |
| TCAATTAACTCCCAGCCTTC+TGG | 0.236033 | 4.1:-14536779 | None:intergenic |
| TTCTCCTCCCTGAGTTGCTT+TGG | 0.321238 | 4.1:-14538656 | None:intergenic |
| ACTCGGTTGGTCTTTACTTT+CGG | 0.333171 | 4.1:-14536749 | None:intergenic |
| ATCGCAATCTAATCGCAAAA+TGG | 0.369378 | 4.1:+14537121 | MS.gene09268:CDS |
| AGAATTGTATGAATTCTGTT+TGG | 0.378231 | 4.1:+14537083 | MS.gene09268:CDS |
| TATGAATTCTGTTTGGATCA+AGG | 0.394850 | 4.1:+14537090 | MS.gene09268:CDS |
| CAATTAACTCCCAGCCTTCT+GGG | 0.426980 | 4.1:-14536778 | None:intergenic |
| CCGACACTCCGCGAACTTCA+AGG | 0.430685 | 4.1:+14536803 | MS.gene09268:CDS |
| CAAACACATAGCGACTCTTC+TGG | 0.436297 | 4.1:-14537029 | None:intergenic |
| TTCTGGGTATTTAACTCGGT+TGG | 0.455796 | 4.1:-14536762 | None:intergenic |
| TCATCTTTCCTTGAAGTTCG+CGG | 0.462364 | 4.1:-14536811 | None:intergenic |
| TAGAAATTTCCTTCCTCCGA+TGG | 0.470939 | 4.1:-14537059 | None:intergenic |
| TTTCCTTCCTCCGATGGTAA+AGG | 0.496872 | 4.1:-14537053 | None:intergenic |
| GAGTTAAATACCCAGAAGGC+TGG | 0.499763 | 4.1:+14536768 | MS.gene09268:CDS |
| AGCCTTCTGGGTATTTAACT+CGG | 0.506523 | 4.1:-14536766 | None:intergenic |
| GCAGAGTACCAAAGCAACTC+AGG | 0.516175 | 4.1:+14538648 | MS.gene09268:CDS |
| CCTTGAAGTTCGCGGAGTGT+CGG | 0.528211 | 4.1:-14536803 | None:intergenic |
| TCTAATCGCAAAATGGAAGA+AGG | 0.546868 | 4.1:+14537128 | MS.gene09268:CDS |
| AAAGCAACTCAGGGAGGAGA+AGG | 0.553597 | 4.1:+14538658 | MS.gene09268:CDS |
| ATGTGTTTGACCTTTACCAT+CGG | 0.556366 | 4.1:+14537043 | MS.gene09268:CDS |
| GTGCGTCCATTGTGGTTGCA+AGG | 0.559549 | 4.1:+14538688 | MS.gene09268:CDS |
| AGTTAAATACCCAGAAGGCT+GGG | 0.562623 | 4.1:+14536769 | MS.gene09268:CDS |
| ATGAACGTCTTTGTTGCTTG+AGG | 0.568236 | 4.1:+14538582 | MS.gene09268:CDS |
| CAACAAAGACGTTCATAACC+AGG | 0.568451 | 4.1:-14538575 | None:intergenic |
| GCGAACTTCAAGGAAAGATG+AGG | 0.592435 | 4.1:+14536813 | MS.gene09268:CDS |
| TGACCTTTACCATCGGAGGA+AGG | 0.596413 | 4.1:+14537050 | MS.gene09268:CDS |
| GGTTGCAAGGGATGTGCAAG+TGG | 0.596759 | 4.1:+14538701 | MS.gene09268:CDS |
| CACATCCCTTGCAACCACAA+TGG | 0.602061 | 4.1:-14538694 | None:intergenic |
| GCTGAGAATGATCCACATGA+TGG | 0.604881 | 4.1:+14536961 | MS.gene09268:intron |
| GTTATAGAGTGCGTCCATTG+TGG | 0.606111 | 4.1:+14538680 | MS.gene09268:CDS |
| TGCGTCCATTGTGGTTGCAA+GGG | 0.612467 | 4.1:+14538689 | MS.gene09268:CDS |
| TGGTACTCTGCACACACAAG+TGG | 0.614153 | 4.1:-14538636 | None:intergenic |
| GTTGCAAGGGATGTGCAAGT+GGG | 0.621084 | 4.1:+14538702 | MS.gene09268:CDS |
| TACTCTGCACACACAAGTGG+TGG | 0.624405 | 4.1:-14538633 | None:intergenic |
| TTGCAAGGGATGTGCAAGTG+GGG | 0.627037 | 4.1:+14538703 | MS.gene09268:CDS |
| CGAACTTCAAGGAAAGATGA+GGG | 0.628080 | 4.1:+14536814 | MS.gene09268:CDS |
| CAGAGTACCAAAGCAACTCA+GGG | 0.635282 | 4.1:+14538649 | MS.gene09268:CDS |
| TGTTTGACCTTTACCATCGG+AGG | 0.636836 | 4.1:+14537046 | MS.gene09268:CDS |
| CTTCAAGGAAAGATGAGGGA+AGG | 0.644926 | 4.1:+14536818 | MS.gene09268:CDS |
| AACCGAGTTAAATACCCAGA+AGG | 0.655859 | 4.1:+14536764 | MS.gene09268:CDS |
| GTGGCAAAATTGTGATCGCG+TGG | 0.681130 | 4.1:-14538614 | None:intergenic |
| AGTACCAAAGCAACTCAGGG+AGG | 0.696329 | 4.1:+14538652 | MS.gene09268:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTAATTTTGAAATCTA+TGG | + | chr4.1:14536904-14536923 | MS.gene09268:intron | 10.0% |
| !!! | CAATAATTATATGTGATTTT+TGG | - | chr4.1:14538444-14538463 | None:intergenic | 15.0% |
| !!! | TAGTTTCAAATATTTTAAGT+TGG | - | chr4.1:14537977-14537996 | None:intergenic | 15.0% |
| !!! | TTGATTCTAAATATACTTTT+GGG | + | chr4.1:14537312-14537331 | MS.gene09268:intron | 15.0% |
| !! | AATAATCCTTAAACATTACA+AGG | + | chr4.1:14537501-14537520 | MS.gene09268:intron | 20.0% |
| !! | ATACCTCTAAATTAAAACTA+AGG | + | chr4.1:14537609-14537628 | MS.gene09268:intron | 20.0% |
| !! | ATGAGAAAATATCAATTCTT+TGG | + | chr4.1:14538351-14538370 | MS.gene09268:intron | 20.0% |
| !! | TGAGAAAATATCAATTCTTT+GGG | + | chr4.1:14538352-14538371 | MS.gene09268:intron | 20.0% |
| !!! | AATATTTTAAGTTGGAATAC+TGG | - | chr4.1:14537969-14537988 | None:intergenic | 20.0% |
| !!! | ATTATATTGTATGCTAGTTT+TGG | - | chr4.1:14537666-14537685 | None:intergenic | 20.0% |
| !!! | ATTCCTTAGTTTTAATTTAG+AGG | - | chr4.1:14537615-14537634 | None:intergenic | 20.0% |
| !!! | CTTGATTCTAAATATACTTT+TGG | + | chr4.1:14537311-14537330 | MS.gene09268:intron | 20.0% |
| !!! | TTATATTGTATGCTAGTTTT+GGG | - | chr4.1:14537665-14537684 | None:intergenic | 20.0% |
| ! | AACGTAGAATAAGTTTGATT+AGG | + | chr4.1:14537235-14537254 | MS.gene09268:intron | 25.0% |
| ! | AGAATTGTATGAATTCTGTT+TGG | + | chr4.1:14537083-14537102 | MS.gene09268:CDS | 25.0% |
| ! | AGTAATATTAATACACAGGT+AGG | - | chr4.1:14538500-14538519 | None:intergenic | 25.0% |
| ! | ATATTTCAATAATTGTCGCT+AGG | - | chr4.1:14538420-14538439 | None:intergenic | 25.0% |
| ! | TAAGTAAGAAATCCAAATAC+AGG | + | chr4.1:14537261-14537280 | MS.gene09268:intron | 25.0% |
| !! | GAATCATATTTTCAGTTTGA+TGG | + | chr4.1:14538313-14538332 | MS.gene09268:intron | 25.0% |
| !! | TGGTGTGCAATTTTAAATAT+AGG | - | chr4.1:14537012-14537031 | None:intergenic | 25.0% |
| !! | TTTATAACTTGTCCAAAGTA+TGG | + | chr4.1:14537808-14537827 | MS.gene09268:intron | 25.0% |
| !!! | TATATTGTATGCTAGTTTTG+GGG | - | chr4.1:14537664-14537683 | None:intergenic | 25.0% |
| !!! | TTTGTGATGTCTTTTTTATG+TGG | + | chr4.1:14536936-14536955 | MS.gene09268:intron | 25.0% |
| AAAGAAAATGCGAGACTTTA+TGG | + | chr4.1:14536986-14537005 | MS.gene09268:CDS | 30.0% | |
| AATTAACTGAAGGCAATATG+AGG | - | chr4.1:14538475-14538494 | None:intergenic | 30.0% | |
| ACAATATAATTTCTCGCAAC+AGG | + | chr4.1:14537676-14537695 | MS.gene09268:intron | 30.0% | |
| ACTTCAAAGAATTACTTGAG+CGG | + | chr4.1:14537457-14537476 | MS.gene09268:intron | 30.0% | |
| AGTGAAGCTTAAGAAAGTTA+AGG | - | chr4.1:14537924-14537943 | None:intergenic | 30.0% | |
| ATGATTCTTCAATCGTATTG+AGG | - | chr4.1:14538300-14538319 | None:intergenic | 30.0% | |
| ATTAACTGAAGGCAATATGA+GGG | - | chr4.1:14538474-14538493 | None:intergenic | 30.0% | |
| CATAAATAGCCATTCACAAT+TGG | - | chr4.1:14538160-14538179 | None:intergenic | 30.0% | |
| GAAGTTACCATTGCATTATA+AGG | - | chr4.1:14537533-14537552 | None:intergenic | 30.0% | |
| GCGTAGTAATATTAATACAC+AGG | - | chr4.1:14538504-14538523 | None:intergenic | 30.0% | |
| GTAGAATAAGTTTGATTAGG+AGG | + | chr4.1:14537238-14537257 | MS.gene09268:intron | 30.0% | |
| TATGAATTCTGTTTGGATCA+AGG | + | chr4.1:14537090-14537109 | MS.gene09268:CDS | 30.0% | |
| TCATTTCCAAGAGACTAAAA+TGG | - | chr4.1:14537869-14537888 | None:intergenic | 30.0% | |
| TGACTACCTTGTAATGTTTA+AGG | - | chr4.1:14537510-14537529 | None:intergenic | 30.0% | |
| TGATTCTTCAATCGTATTGA+GGG | - | chr4.1:14538299-14538318 | None:intergenic | 30.0% | |
| TTAATATTACTACGCACTCT+TGG | + | chr4.1:14538509-14538528 | MS.gene09268:intron | 30.0% | |
| TTGGACAAGTTATAAATGAC+AGG | - | chr4.1:14537804-14537823 | None:intergenic | 30.0% | |
| ! | CATTTTCTTTTTCCATCATG+TGG | - | chr4.1:14536976-14536995 | None:intergenic | 30.0% |
| ! | CTATTTTATAGTTCACTTGC+TGG | + | chr4.1:14537994-14538013 | MS.gene09268:intron | 30.0% |
| ! | GCTTTTACTAAGATGTTATG+CGG | + | chr4.1:14538382-14538401 | MS.gene09268:intron | 30.0% |
| ! | TCATATTTTCAGTTTGATGG+AGG | + | chr4.1:14538316-14538335 | MS.gene09268:intron | 30.0% |
| ! | TTTGCCTGAAGCATAATTTT+TGG | - | chr4.1:14537779-14537798 | None:intergenic | 30.0% |
| !! | TGAACAGTATGTGTTAGTTT+TGG | + | chr4.1:14537886-14537905 | MS.gene09268:intron | 30.0% |
| !!! | AAGCATAATTTTTGGCTTCA+CGG | - | chr4.1:14537771-14537790 | None:intergenic | 30.0% |
| !!! | TTTTCAAGAAGCACTGATTT+TGG | + | chr4.1:14538041-14538060 | MS.gene09268:intron | 30.0% |
| ATCATACACAACACTAGGTT+CGG | - | chr4.1:14537844-14537863 | None:intergenic | 35.0% | |
| ATCGCAATCTAATCGCAAAA+TGG | + | chr4.1:14537121-14537140 | MS.gene09268:CDS | 35.0% | |
| ATGTGTTTGACCTTTACCAT+CGG | + | chr4.1:14537043-14537062 | MS.gene09268:CDS | 35.0% | |
| CAGGTAGGTTAATTAACTGA+AGG | - | chr4.1:14538485-14538504 | None:intergenic | 35.0% | |
| CTATTGACAGAACAGAAACA+AGG | - | chr4.1:14537425-14537444 | None:intergenic | 35.0% | |
| CTTCAAAGAATTACTTGAGC+GGG | + | chr4.1:14537458-14537477 | MS.gene09268:intron | 35.0% | |
| GAAGCCAAAAATTATGCTTC+AGG | + | chr4.1:14537772-14537791 | MS.gene09268:intron | 35.0% | |
| GAAGCTTAAGAAAGTTAAGG+AGG | - | chr4.1:14537921-14537940 | None:intergenic | 35.0% | |
| GATTCTTCAATCGTATTGAG+GGG | - | chr4.1:14538298-14538317 | None:intergenic | 35.0% | |
| GTAGTCACCTTATAATGCAA+TGG | + | chr4.1:14537523-14537542 | MS.gene09268:intron | 35.0% | |
| TCTAATCGCAAAATGGAAGA+AGG | + | chr4.1:14537128-14537147 | MS.gene09268:CDS | 35.0% | |
| ! | ACTTGTCCAAAGTATGGTTT+TGG | + | chr4.1:14537814-14537833 | MS.gene09268:intron | 35.0% |
| ! | CTTGTCCAAAGTATGGTTTT+GGG | + | chr4.1:14537815-14537834 | MS.gene09268:intron | 35.0% |
| !! | ACTAGTCAGAAGTACTAAGA+TGG | - | chr4.1:14537726-14537745 | None:intergenic | 35.0% |
| !! | TGATCTCCATTTTAGTCTCT+TGG | + | chr4.1:14537860-14537879 | MS.gene09268:intron | 35.0% |
| !! | TTGTCCAAAGTATGGTTTTG+GGG | + | chr4.1:14537816-14537835 | MS.gene09268:intron | 35.0% |
| !!! | GTATGTGTTAGTTTTGGTAG+AGG | + | chr4.1:14537892-14537911 | MS.gene09268:intron | 35.0% |
| !!! | TTTGTTTTTAAACTGCAGCC+TGG | + | chr4.1:14538557-14538576 | MS.gene09268:intron | 35.0% |
| AACCGAGTTAAATACCCAGA+AGG | + | chr4.1:14536764-14536783 | MS.gene09268:CDS | 40.0% | |
| ACCTCTTCCTTCATTACAGT+CGG | - | chr4.1:14537288-14537307 | None:intergenic | 40.0% | |
| ACTTCTGACTAGTAATGACG+TGG | + | chr4.1:14537733-14537752 | MS.gene09268:intron | 40.0% | |
| AGCCTTCTGGGTATTTAACT+CGG | - | chr4.1:14536769-14536788 | None:intergenic | 40.0% | |
| AGTTAAATACCCAGAAGGCT+GGG | + | chr4.1:14536769-14536788 | MS.gene09268:CDS | 40.0% | |
| ATTACAGTCGGTCCTGTATT+TGG | - | chr4.1:14537276-14537295 | None:intergenic | 40.0% | |
| CAACAAAGACGTTCATAACC+AGG | - | chr4.1:14538578-14538597 | None:intergenic | 40.0% | |
| CACGGTATGTTAGGTTTGTA+GGG | - | chr4.1:14537555-14537574 | None:intergenic | 40.0% | |
| CAGAACAGAAACAAGGAGAT+TGG | - | chr4.1:14537418-14537437 | None:intergenic | 40.0% | |
| CGAACTTCAAGGAAAGATGA+GGG | + | chr4.1:14536814-14536833 | MS.gene09268:CDS | 40.0% | |
| TAGAAATTTCCTTCCTCCGA+TGG | - | chr4.1:14537062-14537081 | None:intergenic | 40.0% | |
| TCAACTGCTCCAATTGTGAA+TGG | + | chr4.1:14538148-14538167 | MS.gene09268:intron | 40.0% | |
| TCAGTTTGATGGAGGTCTTA+TGG | + | chr4.1:14538324-14538343 | MS.gene09268:intron | 40.0% | |
| TCATCTTTCCTTGAAGTTCG+CGG | - | chr4.1:14536814-14536833 | None:intergenic | 40.0% | |
| TGGAGATCATACACAACACT+AGG | - | chr4.1:14537849-14537868 | None:intergenic | 40.0% | |
| TTCTGGGTATTTAACTCGGT+TGG | - | chr4.1:14536765-14536784 | None:intergenic | 40.0% | |
| ! | ATGAACGTCTTTGTTGCTTG+AGG | + | chr4.1:14538582-14538601 | MS.gene09268:CDS | 40.0% |
| !! | ACTCGGTTGGTCTTTACTTT+CGG | - | chr4.1:14536752-14536771 | None:intergenic | 40.0% |
| !!! | AGTTTTGGGGAAAACTATGG+TGG | - | chr4.1:14537651-14537670 | None:intergenic | 40.0% |
| !!! | GCTAGTTTTGGGGAAAACTA+TGG | - | chr4.1:14537654-14537673 | None:intergenic | 40.0% |
| AACTGAAGGCAATATGAGGG+TGG | - | chr4.1:14538471-14538490 | None:intergenic | 45.0% | |
| AAGGAAAGATGAGGGAAGGT+TGG | + | chr4.1:14536822-14536841 | MS.gene09268:intron | 45.0% | |
| AAGTTGGAATACTGGAGACC+TGG | - | chr4.1:14537961-14537980 | None:intergenic | 45.0% | |
| ACCGACTGTAATGAAGGAAG+AGG | + | chr4.1:14537284-14537303 | MS.gene09268:intron | 45.0% | |
| ACCTAGTCTATCCTGATGGT+GGG | - | chr4.1:14538089-14538108 | None:intergenic | 45.0% | |
| AGTTGGAATACTGGAGACCT+GGG | - | chr4.1:14537960-14537979 | None:intergenic | 45.0% | |
| CAAACACATAGCGACTCTTC+TGG | - | chr4.1:14537032-14537051 | None:intergenic | 45.0% | |
| CAATTAACTCCCAGCCTTCT+GGG | - | chr4.1:14536781-14536800 | None:intergenic | 45.0% | |
| CTTCAAGGAAAGATGAGGGA+AGG | + | chr4.1:14536818-14536837 | MS.gene09268:CDS | 45.0% | |
| CTTTGTTGAGCAGAACTGCA+CGG | - | chr4.1:14537573-14537592 | None:intergenic | 45.0% | |
| GAGTTAAATACCCAGAAGGC+TGG | + | chr4.1:14536768-14536787 | MS.gene09268:CDS | 45.0% | |
| GCACGGTATGTTAGGTTTGT+AGG | - | chr4.1:14537556-14537575 | None:intergenic | 45.0% | |
| GCGAACTTCAAGGAAAGATG+AGG | + | chr4.1:14536813-14536832 | MS.gene09268:CDS | 45.0% | |
| GCTGAGAATGATCCACATGA+TGG | + | chr4.1:14536961-14536980 | MS.gene09268:intron | 45.0% | |
| GGAACCCCAAAACCATACTT+TGG | - | chr4.1:14537823-14537842 | None:intergenic | 45.0% | |
| GTTATAGAGTGCGTCCATTG+TGG | + | chr4.1:14538680-14538699 | MS.gene09268:CDS | 45.0% | |
| GTTGACCTAGTCTATCCTGA+TGG | - | chr4.1:14538093-14538112 | None:intergenic | 45.0% | |
| TAATCTTTCCTCCCACCATC+AGG | + | chr4.1:14538075-14538094 | MS.gene09268:intron | 45.0% | |
| TACAGGACCGACTGTAATGA+AGG | + | chr4.1:14537278-14537297 | MS.gene09268:intron | 45.0% | |
| TCAATTAACTCCCAGCCTTC+TGG | - | chr4.1:14536782-14536801 | None:intergenic | 45.0% | |
| TGTTTGACCTTTACCATCGG+AGG | + | chr4.1:14537046-14537065 | MS.gene09268:CDS | 45.0% | |
| TTTCCTTCCTCCGATGGTAA+AGG | - | chr4.1:14537056-14537075 | None:intergenic | 45.0% | |
| ! | CAGAGTACCAAAGCAACTCA+GGG | + | chr4.1:14538649-14538668 | MS.gene09268:CDS | 45.0% |
| !! | GATGGTGGGAGGAAAGATTA+TGG | - | chr4.1:14538075-14538094 | None:intergenic | 45.0% |
| AAAGCAACTCAGGGAGGAGA+AGG | + | chr4.1:14538658-14538677 | MS.gene09268:CDS | 50.0% | |
| AGTACCAAAGCAACTCAGGG+AGG | + | chr4.1:14538652-14538671 | MS.gene09268:CDS | 50.0% | |
| AGTCCTAAGGTGTGTGTGGT+TGG | - | chr4.1:14537371-14537390 | None:intergenic | 50.0% | |
| CACATCCCTTGCAACCACAA+TGG | - | chr4.1:14538697-14538716 | None:intergenic | 50.0% | |
| CGTGCAGTTCTGCTCAACAA+AGG | + | chr4.1:14537571-14537590 | MS.gene09268:intron | 50.0% | |
| GACCTAGTCTATCCTGATGG+TGG | - | chr4.1:14538090-14538109 | None:intergenic | 50.0% | |
| GCAGAACTGCACGGTATGTT+AGG | - | chr4.1:14537564-14537583 | None:intergenic | 50.0% | |
| GGTGGGAGGAAAGATTATGG+TGG | - | chr4.1:14538072-14538091 | None:intergenic | 50.0% | |
| GTGGCAAAATTGTGATCGCG+TGG | - | chr4.1:14538617-14538636 | None:intergenic | 50.0% | |
| GTGTGTCTTTCGCAGTCCTA+AGG | - | chr4.1:14537384-14537403 | None:intergenic | 50.0% | |
| GTTGCAAGGGATGTGCAAGT+GGG | + | chr4.1:14538702-14538721 | MS.gene09268:CDS | 50.0% | |
| GTTGGAATACTGGAGACCTG+GGG | - | chr4.1:14537959-14537978 | None:intergenic | 50.0% | |
| TACTCTGCACACACAAGTGG+TGG | - | chr4.1:14538636-14538655 | None:intergenic | 50.0% | |
| TCCCACCATCAGGATAGACT+AGG | + | chr4.1:14538085-14538104 | MS.gene09268:intron | 50.0% | |
| TCTCCAACCACACACACCTT+AGG | + | chr4.1:14537365-14537384 | MS.gene09268:intron | 50.0% | |
| TGACCTTTACCATCGGAGGA+AGG | + | chr4.1:14537050-14537069 | MS.gene09268:CDS | 50.0% | |
| TGCGTCCATTGTGGTTGCAA+GGG | + | chr4.1:14538689-14538708 | MS.gene09268:CDS | 50.0% | |
| TGGTACTCTGCACACACAAG+TGG | - | chr4.1:14538639-14538658 | None:intergenic | 50.0% | |
| TTCTCCTCCCTGAGTTGCTT+TGG | - | chr4.1:14538659-14538678 | None:intergenic | 50.0% | |
| TTGCAAGGGATGTGCAAGTG+GGG | + | chr4.1:14538703-14538722 | MS.gene09268:CDS | 50.0% | |
| ! | GCAGAGTACCAAAGCAACTC+AGG | + | chr4.1:14538648-14538667 | MS.gene09268:CDS | 50.0% |
| !! | TAGTCTATCCTGATGGTGGG+AGG | - | chr4.1:14538086-14538105 | None:intergenic | 50.0% |
| ATACTGGAGACCTGGGGTTG+TGG | - | chr4.1:14537953-14537972 | None:intergenic | 55.0% | |
| CACTAGATTCCCACAACCCC+AGG | + | chr4.1:14537940-14537959 | MS.gene09268:intron | 55.0% | |
| CCTTGAAGTTCGCGGAGTGT+CGG | - | chr4.1:14536806-14536825 | None:intergenic | 55.0% | |
| GGTTGCAAGGGATGTGCAAG+TGG | + | chr4.1:14538701-14538720 | MS.gene09268:CDS | 55.0% | |
| GTGCGTCCATTGTGGTTGCA+AGG | + | chr4.1:14538688-14538707 | MS.gene09268:CDS | 55.0% | |
| TACTGGAGACCTGGGGTTGT+GGG | - | chr4.1:14537952-14537971 | None:intergenic | 55.0% | |
| TCGCAGTCCTAAGGTGTGTG+TGG | - | chr4.1:14537375-14537394 | None:intergenic | 55.0% | |
| CCGACACTCCGCGAACTTCA+AGG | + | chr4.1:14536803-14536822 | MS.gene09268:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 14536746 | 14538730 | 14536746 | ID=MS.gene09268 |
| chr4.1 | mRNA | 14536746 | 14538730 | 14536746 | ID=MS.gene09268.t1;Parent=MS.gene09268 |
| chr4.1 | exon | 14536746 | 14536839 | 14536746 | ID=MS.gene09268.t1.exon1;Parent=MS.gene09268.t1 |
| chr4.1 | CDS | 14536746 | 14536839 | 14536746 | ID=cds.MS.gene09268.t1;Parent=MS.gene09268.t1 |
| chr4.1 | exon | 14536962 | 14537149 | 14536962 | ID=MS.gene09268.t1.exon2;Parent=MS.gene09268.t1 |
| chr4.1 | CDS | 14536962 | 14537149 | 14536962 | ID=cds.MS.gene09268.t1;Parent=MS.gene09268.t1 |
| chr4.1 | exon | 14538575 | 14538730 | 14538575 | ID=MS.gene09268.t1.exon3;Parent=MS.gene09268.t1 |
| chr4.1 | CDS | 14538575 | 14538730 | 14538575 | ID=cds.MS.gene09268.t1;Parent=MS.gene09268.t1 |
| Gene Sequence |
| Protein sequence |
