AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20005

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20005.t1 MTR_1g091037 97.923 626 12 1 1 626 1 625 0.0 1241
MS.gene20005.t1 MTR_1g091037 96.688 634 12 2 1 626 1 633 0.0 1234
MS.gene20005.t1 MTR_8g018770 41.575 457 219 8 196 626 109 543 1.41e-107 335
MS.gene20005.t1 MTR_8g018770 64.130 92 32 1 67 157 105 196 7.41e-32 130
MS.gene20005.t1 MTR_1g111140 31.409 433 270 10 206 626 53 470 7.87e-50 180
MS.gene20005.t1 MTR_1g111140 46.154 78 41 1 80 157 53 129 2.19e-13 73.2
MS.gene20005.t1 MTR_5g093300 29.977 427 229 9 206 626 91 453 9.02e-43 160
MS.gene20005.t1 MTR_1g096240 30.631 444 258 10 206 626 41 457 2.15e-42 159
MS.gene20005.t1 MTR_1g096240 48.750 80 38 2 80 158 41 118 7.13e-14 74.7
MS.gene20005.t1 MTR_2g006820 30.445 427 228 12 206 626 88 451 2.48e-42 159
MS.gene20005.t1 MTR_4g120220 27.338 417 274 10 218 612 94 503 1.79e-32 132
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20005.t1 AT3G52200 61.994 642 223 6 1 626 1 637 0.0 733
MS.gene20005.t1 AT3G52200 66.319 576 190 4 54 626 139 713 0.0 731
MS.gene20005.t1 AT3G13930 42.763 456 216 10 195 626 105 539 1.73e-109 340
MS.gene20005.t1 AT3G13930 66.667 93 30 1 67 158 102 194 2.74e-33 134
MS.gene20005.t1 AT1G54220 42.232 457 215 9 196 626 106 539 3.15e-109 339
MS.gene20005.t1 AT1G54220 47.826 161 62 5 4 157 48 193 9.79e-33 133
MS.gene20005.t1 AT1G54220 42.232 457 215 9 196 626 106 539 3.15e-109 339
MS.gene20005.t1 AT1G54220 47.826 161 62 5 4 157 48 193 9.79e-33 133
MS.gene20005.t1 AT3G25860 31.323 431 262 11 206 621 60 471 1.58e-41 157
MS.gene20005.t1 AT3G25860 45.714 70 37 1 80 149 60 128 1.51e-11 67.4
MS.gene20005.t1 AT1G34430 28.243 478 270 11 188 624 18 463 2.01e-39 151
MS.gene20005.t1 AT1G34430 45.000 80 43 1 80 159 44 122 2.42e-13 73.2
MS.gene20005.t1 AT3G06850 29.574 399 249 10 218 610 92 464 3.95e-37 145
MS.gene20005.t1 AT3G06850 29.574 399 249 10 218 610 92 464 3.95e-37 145
MS.gene20005.t1 AT4G26910 28.103 427 240 11 206 626 97 462 2.04e-35 139
MS.gene20005.t1 AT4G26910 28.103 427 240 11 206 626 96 461 2.15e-35 139
MS.gene20005.t1 AT4G26910 28.266 421 235 11 212 626 4 363 3.55e-35 137
MS.gene20005.t1 AT5G55070 34.764 233 137 5 400 626 239 462 1.38e-31 128
MS.gene20005.t1 AT5G55070 34.764 233 137 5 400 626 239 462 1.38e-31 128

Find 134 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTGCAAAGTTGCTAATTT+TGG 0.117845 1.4:+72503760 MS.gene20005:CDS
GGATGACTCCTGCAGATTTC+TGG 0.160996 1.4:+72501714 MS.gene20005:intron
ATACTAACCCTTGACTTTAA+AGG 0.161108 1.4:-72499306 None:intergenic
GCATCTTGGTCTGGGCTTAC+TGG 0.175983 1.4:+72499270 MS.gene20005:CDS
CTTCCACCTCACATTGTTCT+TGG 0.184031 1.4:+72502482 MS.gene20005:CDS
TCCCTTAGAAAGGATCTTAA+AGG 0.228041 1.4:+72504637 MS.gene20005:CDS
TACCTTTAAGATCCTTTCTA+AGG 0.259995 1.4:-72504639 None:intergenic
ATCAGGCCTGCATCTTGGTC+TGG 0.260034 1.4:+72499261 MS.gene20005:intron
GTTAAATTCTTCTCGTCTTC+AGG 0.260453 1.4:+72499407 MS.gene20005:CDS
AACTGTTTACCATTCGCTTC+TGG 0.264341 1.4:-72504832 None:intergenic
GTTGGGTGGTCTTCTCCTTT+TGG 0.268629 1.4:-72503682 None:intergenic
ATGGAATAAATCCTTGAATT+AGG 0.278347 1.4:-72498983 None:intergenic
GGTGATTGCCAAGAGGTTAT+TGG 0.280081 1.4:+72504462 MS.gene20005:intron
CAGATTTCTGGCTAAGATAT+TGG 0.285734 1.4:+72501726 MS.gene20005:intron
AAAGTAGTTGAAGCAGTAAT+TGG 0.307860 1.4:+72507819 MS.gene20005:CDS
ACACTTACTGTTATTGCAAT+AGG 0.308240 1.4:-72503397 None:intergenic
GTTCTTTCTGCAATTAAATC+AGG 0.315243 1.4:+72503848 MS.gene20005:CDS
ACCTTGCGAATTTGACTATT+CGG 0.317916 1.4:-72503992 None:intergenic
ACCAAGGAAACATTGCTAAA+TGG 0.325751 1.4:+72502615 MS.gene20005:CDS
TCATTGGTAATGGGAATCTA+AGG 0.326081 1.4:+72499005 MS.gene20005:CDS
TCAATCGTAGAAGTTGTTTC+TGG 0.331243 1.4:-72502449 None:intergenic
TTTATTCCATCATTGGTAAT+GGG 0.353338 1.4:+72498996 MS.gene20005:CDS
TCAAGGATTTATTCCATCAT+TGG 0.354152 1.4:+72498989 MS.gene20005:CDS
CTTCAAGACTTTCAAATTCA+AGG 0.354404 1.4:-72502854 None:intergenic
GCCGATCATCGCGTCTTTGA+TGG 0.355259 1.4:+72507975 MS.gene20005:CDS
TCAGGCCTGCATCTTGGTCT+GGG 0.357398 1.4:+72499262 MS.gene20005:intron
CGCGTCTTTGATGGCAAAGT+TGG 0.371068 1.4:+72507984 MS.gene20005:CDS
TTCTCCAAGCTCACCATTGT+AGG 0.374090 1.4:-72499619 None:intergenic
ATTTATTCCATCATTGGTAA+TGG 0.379340 1.4:+72498995 MS.gene20005:CDS
CCCAAGGTAATATTGCAAAA+TGG 0.384478 1.4:+72499723 MS.gene20005:CDS
TCCATTTAGCAATGTTTCCT+TGG 0.387351 1.4:-72502616 None:intergenic
CAATGTTAAGTTCAACTTAG+TGG 0.394633 1.4:-72507949 None:intergenic
TCCTCTTCTTTCCCTTAGAA+AGG 0.394886 1.4:+72504627 MS.gene20005:CDS
ATTGCAATCGGTTGTCCAAC+TGG 0.402399 1.4:-72501772 None:intergenic
TAGATTCCCATTACCAATGA+TGG 0.402968 1.4:-72499002 None:intergenic
AAAATGGTCTCACCATTGTT+GGG 0.405872 1.4:-72502520 None:intergenic
CCTTGCAGCATTTCAAACTT+AGG 0.408249 1.4:+72506492 MS.gene20005:intron
CAAAATGTTCCTGCTTCTGT+GGG 0.414581 1.4:+72502362 MS.gene20005:CDS
TGTTTATCAGGCCTGCATCT+TGG 0.430921 1.4:+72499256 MS.gene20005:intron
CTTACACTATGGCAGCATAC+TGG 0.434085 1.4:+72505937 MS.gene20005:intron
CCACACTTATATTTATCATC+AGG 0.436004 1.4:+72504502 MS.gene20005:CDS
TGACTTACTGTTATTGCAAT+CGG 0.439322 1.4:-72501784 None:intergenic
AAAATTAGCAACTTTGCAGC+TGG 0.442890 1.4:-72503758 None:intergenic
TCAAAATGTTCCTGCTTCTG+TGG 0.447831 1.4:+72502361 MS.gene20005:CDS
GGCACAGAACTCCTAATTCA+AGG 0.453842 1.4:+72498972 MS.gene20005:intron
TTCTCTTTGTTTCAGACCCA+AGG 0.460450 1.4:+72499707 MS.gene20005:intron
GCATCAACATTGAATGCAAC+TGG 0.462945 1.4:+72503797 MS.gene20005:CDS
ACCTGCTTCATCTAAAGAAA+AGG 0.464759 1.4:+72503886 MS.gene20005:CDS
CAGGCTTGCATTCTTGCCGT+AGG 0.467201 1.4:+72507786 MS.gene20005:intron
TTTAGATTCCAATAACCTCT+TGG 0.470034 1.4:-72504470 None:intergenic
GAGTACTACGTACCTCGAAA+TGG 0.470118 1.4:-72497840 None:intergenic
CTTCCACCAGATCCATTTCG+AGG 0.479665 1.4:+72497828 MS.gene20005:CDS
TCTCCTCAACTGCGTCATCC+TGG 0.480636 1.4:-72502421 None:intergenic
TGCATTCTTGCCGTAGGGAG+AGG 0.482989 1.4:+72507792 MS.gene20005:CDS
TACTTTGTTGCCTCTCCCTA+CGG 0.485239 1.4:-72507802 None:intergenic
GAATTTGAAAGTCTTGAAGA+AGG 0.486562 1.4:+72499959 MS.gene20005:CDS
ACTGCGTCATCCTGGTGTGC+TGG 0.491742 1.4:-72502413 None:intergenic
GTCTTTGATGGCAAAGTTGG+AGG 0.493709 1.4:+72507987 MS.gene20005:CDS
AAATGTTCCTGCTTCTGTGG+GGG 0.496201 1.4:+72502364 MS.gene20005:CDS
TAAAATTACCTCTGAGGAGA+TGG 0.500540 1.4:-72506190 None:intergenic
GCCATCAAAGACGCGATGAT+CGG 0.501383 1.4:-72507976 None:intergenic
TTCAAGACTTTCAAATTCAA+GGG 0.507491 1.4:-72502853 None:intergenic
CAGCAGCTCAGTAAACCAAA+AGG 0.507674 1.4:+72503667 MS.gene20005:CDS
TTTAATCTTACAGATAGCAG+TGG 0.509003 1.4:+72499895 MS.gene20005:intron
TACGTACCTCGAAATGGATC+TGG 0.510505 1.4:-72497834 None:intergenic
TAACAGACCTTTAAAGTCAA+GGG 0.511167 1.4:+72499299 MS.gene20005:CDS
TTGAAGCCGCAAGAATTTCA+AGG 0.513994 1.4:+72506350 MS.gene20005:CDS
GTAACAGACCTTTAAAGTCA+AGG 0.515150 1.4:+72499298 MS.gene20005:CDS
GGCACATCCTTTGAACCATC+AGG 0.517874 1.4:-72501751 None:intergenic
ACCATTGTTGGGGACAAAGC+AGG 0.523413 1.4:-72502509 None:intergenic
ACCTTTAAGATCCTTTCTAA+GGG 0.528321 1.4:-72504638 None:intergenic
GCATACTGGAATGATGAGAA+AGG 0.537633 1.4:+72505951 MS.gene20005:intron
TGGTGGAAGAAGAGAGGATA+CGG 0.540241 1.4:-72497814 None:intergenic
CATACTGGAATGATGAGAAA+GGG 0.541352 1.4:+72505952 MS.gene20005:CDS
GGTTCAAAAGAAGTGGCTGT+TGG 0.541517 1.4:+72503370 MS.gene20005:CDS
AATGTTCCTGCTTCTGTGGG+GGG 0.547914 1.4:+72502365 MS.gene20005:CDS
AATTTGAAAGTCTTGAAGAA+GGG 0.551670 1.4:+72499960 MS.gene20005:CDS
AGAGAAGAAACCAGCACACC+AGG 0.551965 1.4:+72502403 MS.gene20005:CDS
AAAGAACATCACCTTTCAGT+AGG 0.552826 1.4:-72503832 None:intergenic
TGGATCTGGTGGAAGAAGAG+AGG 0.553812 1.4:-72497820 None:intergenic
CTGGTGCAACTATCTTAGCT+AGG 0.563129 1.4:-72503345 None:intergenic
AGGCTTGCATTCTTGCCGTA+GGG 0.563888 1.4:+72507787 MS.gene20005:intron
GTAAGCCCAGACCAAGATGC+AGG 0.564967 1.4:-72499267 None:intergenic
GAATTTGAAAGTCTTGAAGA+GGG 0.566919 1.4:+72502858 MS.gene20005:CDS
TGAATTTGAAAGTCTTGAAG+AGG 0.567797 1.4:+72502857 MS.gene20005:CDS
ATTGGTACCTGATGGTTCAA+AGG 0.568103 1.4:+72501744 MS.gene20005:CDS
TGAAGCCGCAAGAATTTCAA+GGG 0.570440 1.4:+72506351 MS.gene20005:CDS
TTCAACTTAGTGGCAACAGA+TGG 0.572073 1.4:-72507939 None:intergenic
GGATGGAATGAGAGATGAGA+GGG 0.572189 1.4:-72497793 None:intergenic
AAAATGTTCCTGCTTCTGTG+GGG 0.574527 1.4:+72502363 MS.gene20005:CDS
GAGATAAAGCTGGCATCCCA+AGG 0.576893 1.4:-72499597 None:intergenic
GGAAGAAGAGAGGATACGGA+TGG 0.582669 1.4:-72497810 None:intergenic
ACCAGAAGGTTCAAAAGAAG+TGG 0.583999 1.4:+72503363 MS.gene20005:CDS
GTACCTCGAAATGGATCTGG+TGG 0.589112 1.4:-72497831 None:intergenic
ATTATCTAATAGATTGAAGT+GGG 0.589807 1.4:+72502795 MS.gene20005:intron
GCCAGCTTTATCTCCTACAA+TGG 0.590978 1.4:+72499606 MS.gene20005:CDS
GCTAAGATATTGGTACCTGA+TGG 0.592832 1.4:+72501736 MS.gene20005:CDS
GAAGCAGTAATTGGAGCTGA+TGG 0.599965 1.4:+72507828 MS.gene20005:CDS
AATTATCTAATAGATTGAAG+TGG 0.600966 1.4:+72502794 MS.gene20005:intron
TTGAATGCAACTGGTCCTCA+CGG 0.601871 1.4:+72503806 MS.gene20005:CDS
ACACCAGGATGACGCAGTTG+AGG 0.602552 1.4:+72502418 MS.gene20005:CDS
AAGAACATCACCTTTCAGTA+GGG 0.605863 1.4:-72503831 None:intergenic
CGGATGGAATGAGAGATGAG+AGG 0.606341 1.4:-72497794 None:intergenic
GGCATCCCAAGGACTTCATG+TGG 0.606738 1.4:-72499586 None:intergenic
TCCGAATAGTCAAATTCGCA+AGG 0.610832 1.4:+72503991 MS.gene20005:CDS
CTAGCTGCAAAAGCTCGTGA+AGG 0.612789 1.4:+72506323 MS.gene20005:CDS
AACTGCTATTGATATGTCAA+CGG 0.613311 1.4:-72505994 None:intergenic
AATAGCAGTTGCCACAGAGA+AGG 0.613496 1.4:+72506007 MS.gene20005:CDS
GCTAAGATAGTTGCACCAGA+AGG 0.613963 1.4:+72503349 MS.gene20005:CDS
GAGAGATGAGAGGGTGACGA+AGG 0.614718 1.4:-72497784 None:intergenic
AAGGTAATATTGCAAAATGG+AGG 0.615748 1.4:+72499726 MS.gene20005:CDS
TTAATCTTACAGATAGCAGT+GGG 0.617105 1.4:+72499896 MS.gene20005:intron
ACCATTGTAGGAGATAAAGC+TGG 0.617916 1.4:-72499607 None:intergenic
CCTCACGGCACCCTACTGAA+AGG 0.619375 1.4:+72503821 MS.gene20005:CDS
CCTGATGATAAATATAAGTG+TGG 0.619611 1.4:-72504502 None:intergenic
AAATGGTCTCACCATTGTTG+GGG 0.628389 1.4:-72502519 None:intergenic
TAGCTGCAAAAGCTCGTGAA+GGG 0.628747 1.4:+72506324 MS.gene20005:CDS
AATTTGAAAGTCTTGAAGAG+GGG 0.634547 1.4:+72502859 MS.gene20005:CDS
ATAGCACAGAATTTATCCAC+AGG 0.635053 1.4:-72506522 None:intergenic
AAACTTAGGAATGTATCCTG+TGG 0.636069 1.4:+72506506 MS.gene20005:CDS
GCCTGCTTTGTCCCCAACAA+TGG 0.637348 1.4:+72502508 MS.gene20005:CDS
GGCATTCCAAGAACAATGTG+AGG 0.645606 1.4:-72502488 None:intergenic
ATACTGGAATGATGAGAAAG+GGG 0.650066 1.4:+72505953 MS.gene20005:CDS
GGTTCAAAGGATGTGCCAGT+TGG 0.650593 1.4:+72501757 MS.gene20005:CDS
GAATGTGTCAGATGTTACAC+TGG 0.651891 1.4:+72504603 MS.gene20005:intron
TCCTTTCTAAGGGAAAGAAG+AGG 0.654298 1.4:-72504628 None:intergenic
ATGACATAAAATTACCTCTG+AGG 0.663836 1.4:-72506196 None:intergenic
AATATCTGCCATCTCCTCAG+AGG 0.672604 1.4:+72506182 MS.gene20005:CDS
ATTCCAAGAACAATGTGAGG+TGG 0.680621 1.4:-72502485 None:intergenic
AGCCGCAAGAATTTCAAGGG+GGG 0.690006 1.4:+72506354 MS.gene20005:CDS
GAAGCCGCAAGAATTTCAAG+GGG 0.691289 1.4:+72506352 MS.gene20005:CDS
ACCATCAATTACCTTCTCTG+TGG 0.706378 1.4:-72506018 None:intergenic
CCTTTCAGTAGGGTGCCGTG+AGG 0.734484 1.4:-72503821 None:intergenic
AAGCCGCAAGAATTTCAAGG+GGG 0.739644 1.4:+72506353 MS.gene20005:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.4 gene 72497770 72508578 72497770 ID=MS.gene20005
chr1.4 mRNA 72497770 72508578 72497770 ID=MS.gene20005.t1;Parent=MS.gene20005
chr1.4 exon 72497770 72497849 72497770 ID=MS.gene20005.t1.exon1;Parent=MS.gene20005.t1
chr1.4 CDS 72497770 72497849 72497770 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72498979 72499026 72498979 ID=MS.gene20005.t1.exon2;Parent=MS.gene20005.t1
chr1.4 CDS 72498979 72499026 72498979 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72499266 72499320 72499266 ID=MS.gene20005.t1.exon3;Parent=MS.gene20005.t1
chr1.4 CDS 72499266 72499320 72499266 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72499398 72499428 72499398 ID=MS.gene20005.t1.exon4;Parent=MS.gene20005.t1
chr1.4 CDS 72499398 72499428 72499398 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72499581 72499627 72499581 ID=MS.gene20005.t1.exon5;Parent=MS.gene20005.t1
chr1.4 CDS 72499581 72499627 72499581 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72499722 72499766 72499722 ID=MS.gene20005.t1.exon6;Parent=MS.gene20005.t1
chr1.4 CDS 72499722 72499766 72499722 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72499908 72499981 72499908 ID=MS.gene20005.t1.exon7;Parent=MS.gene20005.t1
chr1.4 CDS 72499908 72499981 72499908 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72501729 72501798 72501729 ID=MS.gene20005.t1.exon8;Parent=MS.gene20005.t1
chr1.4 CDS 72501729 72501798 72501729 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72502341 72502529 72502341 ID=MS.gene20005.t1.exon9;Parent=MS.gene20005.t1
chr1.4 CDS 72502341 72502529 72502341 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72502614 72502658 72502614 ID=MS.gene20005.t1.exon10;Parent=MS.gene20005.t1
chr1.4 CDS 72502614 72502658 72502614 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72502807 72502880 72502807 ID=MS.gene20005.t1.exon11;Parent=MS.gene20005.t1
chr1.4 CDS 72502807 72502880 72502807 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72503342 72503411 72503342 ID=MS.gene20005.t1.exon12;Parent=MS.gene20005.t1
chr1.4 CDS 72503342 72503411 72503342 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72503623 72504012 72503623 ID=MS.gene20005.t1.exon13;Parent=MS.gene20005.t1
chr1.4 CDS 72503623 72504012 72503623 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72504463 72504523 72504463 ID=MS.gene20005.t1.exon14;Parent=MS.gene20005.t1
chr1.4 CDS 72504463 72504523 72504463 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72504614 72504658 72504614 ID=MS.gene20005.t1.exon15;Parent=MS.gene20005.t1
chr1.4 CDS 72504614 72504658 72504614 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72504761 72504844 72504761 ID=MS.gene20005.t1.exon16;Parent=MS.gene20005.t1
chr1.4 CDS 72504761 72504844 72504761 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72505952 72506028 72505952 ID=MS.gene20005.t1.exon17;Parent=MS.gene20005.t1
chr1.4 CDS 72505952 72506028 72505952 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72506141 72506203 72506141 ID=MS.gene20005.t1.exon18;Parent=MS.gene20005.t1
chr1.4 CDS 72506141 72506203 72506141 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72506314 72506384 72506314 ID=MS.gene20005.t1.exon19;Parent=MS.gene20005.t1
chr1.4 CDS 72506314 72506384 72506314 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72506500 72506560 72506500 ID=MS.gene20005.t1.exon20;Parent=MS.gene20005.t1
chr1.4 CDS 72506500 72506560 72506500 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72507789 72507849 72507789 ID=MS.gene20005.t1.exon21;Parent=MS.gene20005.t1
chr1.4 CDS 72507789 72507849 72507789 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72507928 72508008 72507928 ID=MS.gene20005.t1.exon22;Parent=MS.gene20005.t1
chr1.4 CDS 72507928 72508008 72507928 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
chr1.4 exon 72508520 72508578 72508520 ID=MS.gene20005.t1.exon23;Parent=MS.gene20005.t1
chr1.4 CDS 72508520 72508578 72508520 ID=cds.MS.gene20005.t1;Parent=MS.gene20005.t1
Gene Sequence

>MS.gene20005

ATGGCACTCTCGCGCCTTCGTCACCCTCTCATCTCTCATTCCATCCGTATCCTCTCTTCTTCCACCAGATCCATTTCGAGGTACGTAGTACTCTCTCAAATCTTGCTACGCAATTATGATCATTTTTTTAATATTTGTAAAGTTTTGTTTTTTATCTGATTTCCTTTAACTTTGGTCGAAATTACTTAATGGGGTTTTGAGTTTTTAGCTCATAGGTTAGTTGGTAGGTTGATCATGTTTTTCATGTTCAATTAGGGGGTTTATGAATGATGGATATAGATTTTGTGATCGTGATTGTGATTTTGAAATTATTAATGTTAATTATGCATTTTAGTATTGTAGTTGAAGTTTATTTTGTGATGTTTTTGTTTAGACTTACTTTGTGAGTTTGTTTTGTACTTAAGTAGATGGTTATAGTGCTGAGTTTGGACCTTATTTGATTAAAAAATGGTTGCTTTTCATATTTGGGTATAGAATTTCTTATGTGAAATTTAGAGGATTGGTTACTAGTTTAGGGTTTAAGGGTTTTGGTTACTAGTTTAGGGTTTAAGGGTTTATGCTTCATTTGGATGAACATGAAACTGAAATGGTGCTATTGATCAGTTAGTGATAGTATTCTGCTTGTCGTGTTTACTTGCACGAGTCGTCCGGCTTACATTAGGTGAATTGAGTATTAATTTGAGATGTTGCTAGCAAGTTCTTAGTGTTGTTGGATTTCTTCCAATTTTGATTAATCCATTTATACATATAATATATCATACATGGGGTCTGTTTGGATTGATTTATTTGAGATTATCTACTGGCATAAGTTTTGTGAGGCTGTTTGGGATAACTTATGACACTGTTATAAGCTGTCTATAACTTGTTTTCGTATAGCTTATACGAAAACAATTTAACTTTATTTTATCTTTTGCAATAGAAATAACTTATACATAAGCGCTTATCATGATAAACACTTACGTTATAAGCTGTAAATAAGCTGGTTATCCAAATAGGGACATAGTATCGTTTGGTGGCATGGCATCTTTTACTTAGGACATGCCAATTTTTACTTATTAATTGCTTTCTTTACTTTTGAAAGAATGGTAGGCTTTTTTAATGTTTGTAGCATCATATTTATTGTAATTCTGCTTTGGTGGGTTTTTCTCCTTCTAAGAATGCTGCTTCTATGTTTCTAACACACTGTTTTCTGTTATCATCTTGGCACAGAACTCCTAATTCAAGGATTTATTCCATCATTGGTAATGGGAATCTAAGGTTTGCATCCATTAACCAGTATTTTTTCTCACTAGCTGCAAACTTAGTTTTTATTTAAAGTTATCTTATTATGTCTATTAGGATAAAAGGTGTCCCCTTTTTCGACCACCAATAAGCCATTTTCATTGGTTGAGCATAAAAATAAAAAATCTACGTCATTCTCTATCTCCTCTAGTTCATCCTCCTTCCTCAACTTTGTATGATCTAATTGACAGTTTACCATTGGTGATGTTTATCAGGCCTGCATCTTGGTCTGGGCTTACTGGAGTTTGTAACAGACCTTTAAAGTCAAGGGTTAGTATTTAAATAGATACATTTTTTCAATCATGACTACAATATTCTCTGACATCAACCGTCAACATTTTTGGCAGTGGATTGATGTTAAATTCTTCTCGTCTTCAGGTACTCAATGTTCCTGTTACCTAATTTTAAAAGCTTCTACTTGTTTAGGATTTTTGTTTTATGGTTTCTCTTTTATGATTAACAGAGGATAATCTGCAAATTCAATCATGTGTATCTGATTATGTTCTGATCATTGTTCCCCCATTTAATAGATTTTCCACATGAAGTCCTTGGGATGCCAGCTTTATCTCCTACAATGGTGAGCTTGGAGAAACAAATAGTTTTCTCTCCCTTTTCTGATCACTTTTCATTTAGGGCTTTCATGGAATTTTAACCTCTTCTCTTTGTTTCAGACCCAAGGTAATATTGCAAAATGGAGGAAAAAAGAAGGGGATAAGGTCTGTTTGCACATAGTTTTTATGTTTTGATTGTTGCATTATTGCATATCATAATTCTGTTTGCTTTGATGCTTTCATTTTGAAAATTGATTTCTTTGAATGAATTAATCATTTTCTCCTTGCTACTGTTTAATCTTACAGATAGCAGTGGGTGATATACTATGTGAAATTGAAACTGACAAAGCTACACTTGAATTTGAAAGTCTTGAAGAAGGGTATTTTTTTTCTTCCTAAGTACTGGATGGCCTTTAATTTAAAATTTATAAACTTGAGTTTCTTACTGTTGAAGTTAAAGGAAGCAACGCAAATGTTAGTCCTGTTACAATTCAACATATCCCAGCTGGACTGTTTAGCAACTTGAATGTTGCTCGTGATATGTGTATCTCAGGCCATCTTTGGAGTAATACAGTTTTGATGGTTACATGATTGATCCAGTATCAAGCTCTCTCCCAGTATGACTTGACAGTCCAAGAAAATCTTCCTGTCAGATTTCCTAGTAAGACAGAAATCTATTTAAGAACATGCCACCCCGCTCTTGGATGTGATAAGATGCCCCTCCCTTTTCTTAAAGCACGTATTAGCTATAGCTAGATCAAAAGGCGACGAAAAAATTATGATGGATTTACCCTCCACATTCACCTCTCCGAGGACATATGGAACCCCTCATAACCTCTTGATACACTCTGACATGCCCAGTTAGATCCACTCCTAGAAAAATATTTTCTCCTACTGATATTTCCTAAGCTAAGCATTCTAAATCCCCCAAAAAATTTACTTTATGGTGTTCTTATAACCATACTTAAAGGTGTCTTGTTCAACTTCAAATTTAGGCAATGATCCGATCTTGTATCCTTTTTACATCCACAATATCCTTCTTCCACTTCTTACCAACAATAATGCCTACCCCATTTATCGATCTTACATTGCCAGTGTATTAAAGCTTAACATTTGAACTGTCCAATTCTTTTGCCTTTTCACACGCTCACTTAGTTTCTTGTATGCACACCACAATTGATCCTCCTCGTAATCATTGTGTCCACTATTTCCGTAGGTTTTCCTTTTAAGCATGCCTATATTCGATGTTCTAAAATGAGTCCTAATCTCATGAACTAGATTTCTTACCCACACCAATCCACAAAAATGTTGCAACCCTTGCTTATTTTTCACTGCATCCAGGTGGTGGTGCAGCAACAACTATTACTCGTATGACACTGTACTCGAGCTATACATTGTGTTGCTTCTGGGCAACGACGTAAATTTAACGTTATTACATATTCAGTCCATTGCCGTATTGATTCGACCAAGTTTTACGTTGGTTGTAAATGCCAAATACAAACCTCTCTTTTTACGATTATGCATAGCAAGGCTAACATAGGCATGGTTATTTTAATTTATTTTTAGCTTATAGGAAAAATAAGTTGAAAAGTGTAAAGCTAGAGGGACGAGAGAGAATAAAAACTTAGAATTATTATGATCTTTTGATATTATGATACAAAAGACTAAATACTAACCTTTGTTCATACTTATACTAACCTCCTAGTCGGTAGCATTAACTGAGACTAAAACATTAGTGTCGGTGACATAGATCAAAACTTTAAGATTACCTGGTGCTGTATGACCATCACAATACTCGTCTAACTGGTAAGAACAAACATGTAGAAACCACCCTTGAATTGTAGTCATTCATTGTTTTTCGAAGTGACTGTCTTCTGTACTTTATATGTTTTGGACATGCATGTGTCTGTTTAAGACAATAATGTCTTTGATTTAATTTTTTTTTTTCTCAATGTTATTTTCTTATGCCTATTTGGGCCTTCTATTATATCTGGCTTACTATAATTGAACTGATTTTGACCCTTACTATAATTGAACTGATTTTGACCCTAGAGTGTAAATCATATAAAACATCCAAATTTTAGCATACAATTAAAATGTGTTGTAGTGATTGGATGACTCCTGCAGATTTCTGGCTAAGATATTGGTACCTGATGGTTCAAAGGATGTGCCAGTTGGACAACCGATTGCAATAACAGTAAGTCAAGCCAACATTAAGTTCCAACTCTTGTATTTTTATTTGTTACTGTTATGTGGACACCATAGCAATGTTTACTTCCAACATTAATGGATTCTGCAGATGAAAGTAGCTTTCCTAGACAGAAAATTAATAATGTCATTTTGCACACTGGATTTATTTAATCTCTTTTGACAAAATTGACGCAACAATTGTTTTCATTGTGTGTTCCAATGTGCACCTTTATGTTTTTTAATCTGCCAATGAAAACTTTGCAATTTATCCGTTGCCCGGGAGTTGCTTTTATTTCTGTCTTCTCTCCAATTTAATAAAATTGTGTTACACGCTCACTATTACTGGCTTAAATAACTTAAAGTCTTACTTTTCTTAAAAAAGACACACACACACACACACATTTGCCATAGGAAGTCTATTCCAGCTCATTCGAAAAATATAGACTTTAAATGTTAACTTAATGATTCTAACCTACAATTCTGGAGTTCAAGTGAGATTTGCATCCGAAATATTTGATCATGTAAGCTCTAACGGTGAGCCTTGACAAGGTTGAGGAAGAAAGCGACATTCAAAATGTTCCTGCTTCTGTGGGGGGTGAGAGCGGGGTTGAAGAGAAGAAACCAGCACACCAGGATGACGCAGTTGAGGAGAGAAAACCAGAAACAACTTCTACGATTGATACATCAAATCTTCCACCTCACATTGTTCTTGGAATGCCTGCTTTGTCCCCAACAATGGTGAGACCATTTTTATGCTACTTGTAACTATTTCCAACATAAACTTTTCTTCCACTAAATGATTTTCAATTTTTTTCTTCACAGAACCAAGGAAACATTGCTAAATGGAATAAAAAAGAAGGAGACAAGGTTAGTTATGTTTTTAACATAAGATTTCAAGTGAGATTTCCTTTTTAACGTATTTTTGAAAATTTTAAAATGTGAAGGATGTAAGTAAGTCATTACATCCGTTTTATTTATTCTGTGTTCCATGAATTAACATCTAATTATCTAATAGATTGAAGTGGGTGACATATTATGCGAGATAGAGACAGACAAAGCTACCCTTGAATTTGAAAGTCTTGAAGAGGGGTAAATGTCTTTCCTTGTACTTAAAGCCTTTCACTGTGAATATTGTGTTTGGTATAGTTGCCTGTTCGCATTGCAACATGTTGTGTTATTAAACAACATTTTTAGGCCAAGCAGCTTCATCTTAAATAATGTTTTTGCACATAATGAAGACTTGAGGCATATAATATGGGTTGTAAACATATTTATTACATGCCTGATATCTTACTGAAGTGTTTATAGACATGCCTAGTACTAAACAGTTTCCTTCAATAAAGTATGAAAGAAACCCAGGAATGGTGGCTAACCTCTTTCCTTTTGATATTGCTAATTATAATGCCAAATTACCGACCAGTTTTTTAGCACAAAGCTGGTATTCTATTTGGTCTATTTTACAGACAATCACTATTTGTTTTTCTTTCTTCTCCTCGATAAAGTTTTGCCATCTAGCTGACCAACTTATGTCTGACATTTCGAGGGACTAGGTACCTAGCTAAGATAGTTGCACCAGAAGGTTCAAAAGAAGTGGCTGTTGGACAGCCTATTGCAATAACAGTAAGTGTGAAAATGCTTTGTAACTTCTTCTATCAACACATTGTAAAGTTTGAGCTCCAACGATCTGGCATCTACTTTTGAAATACAAACTAAAAATGTCTGATGATGTTCCGTAAATTTATTGGTTAATTTACCAAATTGATACTCTTTGCTTTTGTCTTGAAAAGCATTGTAGTGTATGAAATAATTATGCTGCCTGCTCTTTCGCAAGGTTGAAGATGCAAGTGATATTGAAGCTGTTAAGAATTCTATTAGCAGCAGCTCAGTAAACCAAAAGGAGAAGACCACCCAACATGACACTAAAAGTGAAGTCAAAACAAAGAAAACGAACACAGCACGAATCAGTCCAGCTGCAAAGTTGCTAATTTTGGAATATGGATTGGACGCATCAACATTGAATGCAACTGGTCCTCACGGCACCCTACTGAAAGGTGATGTTCTTTCTGCAATTAAATCAGGAAAATTGTCTTCAAAACCTGCTTCATCTAAAGAAAAGGCATCATCATCTCAAAGTCATCAAGTTGCGACTTCACAAGAATCAAAGTCTAGCTTAAAGCAGTCAGATACTTATGATGATTTTCCGAATAGTCAAATTCGCAAGGTAGGACCCTCAAATATTCAGTTTTAAATATAAATAAGGTTCTTCAATTCTTTCACAGAATATGTTGCATGGTAATGAAAATTATTTTTGCCAAATAAGAATGTACGAAAAGTATTAAAAAGGGACTAAGGGAAGACATTGTTTGGTGTCTATCGTTGGGAGTTGAATGCTAAAAAATCTTACGAATTTTAATTTGTTATTACACCTAATATTGGTCCTAATTGTATTTGTCGCCTCTATATAGTGAATTCAGCATATTGTTTTGGTAATACTTGGTCATTGTTGTACATGCAGAGTTCAGTTTTGTAATGTTTTTGTTCTATTATGGATGTCCTGTCCTTTCTATTTACATCTCTACTACCTAAATACTTAGGAAAATTGATAGTTAATGGACTATATTTCAACTCTGCTTCCTTCCACTCATCTCAAATATTTTTGACTGTTTTGTAGGTGATTGCCAAGAGGTTATTGGAATCTAAACAAAATACGCCACACTTATATTTATCATCAGGTTTTAATCCCCTTATGTCGTGCATATTATTGCAGATTAATCTATTTTTGTACAAACTAATTAATATAAATTTTTATTGGAATGTGTCAGATGTTACACTGGATCCTCTTCTTTCCCTTAGAAAGGATCTTAAAGGTATGACTGATATTAATTTTTCATTGGCACATTTTAGATGTTACGGCTTGGTCCTGGTACATCTGTAATCCAATATAATCTTGATTTGGTCCTTCATTGCAGAGCAGTATGACGTCAAAGTTTCAGTGAATGACATTATTATCAAAGTTGTAGCAGCTGCTCTCAAAAATGTTCCAGAAGCGAATGGTAAACAGTTTCCTATTATTTTTCTATCCATTTGTGTTGTATTTACCTTAATTATCTTAGGTGTTAGAACTAGTGGTGACGGACCCAGAAGGTGCTGAGCAACTGACATATAAATTTATAGCTATTACATATAATTTTTGCAACAAAAATACGCAAGTACCGTATACATTACTGTGAATGTTGCCGAATTGTTGACTGAAGTGTTTATCCCACAAAACCAAACTCGCAAAGGCTGTTTGAAGCATACTCAAGTAGTATAAACTCATCTGGACTCCCCGAGCTTCATAACCATGTGGCTAGAAGGCTGTTGGAGATAGGTGGCTAGTGGTAAAACATAGAAAGGCTTATTCGCCTGATATTTTAACCCATATAGTTTGAAACATTCTGAGTCGAATTGTAGGATCATATCGGCAGTCAAATCTGAGTACATGCAAGAAATGGAGACAGAAACTGTGGCAGACAGTGATGGTTGCCAAAGACTAAAAAGTAGGACGAAAACAGATGGCATCAAACAACAGAACTGTATATTTTTGAAGCTTAACGGAAGAATAAGAATGGGATTAGGCTATGGGGAATTGTACTGGTGATTTCCATGTTGAAATCACATATTTTTCAACCCCCGGAAAAAGTTGACTTAAAGGATTTGTTGCAAAAGGAAGGGATGGAAGAAACATTATATTTTACTGATAAGAAGTTCTTAAGATATAATACATAAGCATTGGCATTTATAATTGTTGGAAGTTTTCCTTAATTGCAGGCCACTTCCAGCCGCCTTAATTGCGGTTACTTTAGACTGCCTTTATCGCAGCCTCCAGCACCTTTGTGCTAGATATGGCCTAAGTAGTACGTAAGGTTTGGATATTTCTCATCTTACAAGCCAATTTTTTTGAGGATGAGTTAGGCCTTAAGCCTAAGTTCTCTGTACAATAGTAAAATCTACGCCAAGCATAACTAACATAACCTAATGCAGTACGATTAATAAAATAACTAGGCTCCTAAACATGAATAACTAGGCTCCTTACAGAAGCCTAAATCCTCACGTATTCTCAAAACCAGATTTTCTCTATAGAAGTCTCTAATGCTTAAATCCAACTTACACTATGGCAGCATACTGGAATGATGAGAAAGGGGAAATCATCTTACGCGACTCCGTTGACATATCAATAGCAGTTGCCACAGAGAAGGTAATTGATGGTTGTTTAACAGTCATTTTACAAAATACTCAATCCTTTTGTGTGGCTATAGGGCTTGATGACTCCAAATTTTACAAAATACTCAATCCTTGTGTGGCTATAGGGCTTGATGACTCCAATATTAAAAAATGCGGATCACAAGACAATATCTGCCATCTCCTCAGAGGTAATTTTATGTCATTGACATAGGTTCCTATTTAATGTTTTTTCAGGAATCTTGACTGTTTGTGTTTAGGCATTTTTATTTGAAATTTTAATACTTTAGTGGCACTTTAGGTCAAGGAGCTAGCTGCAAAAGCTCGTGAAGGGAAGTTGAAGCCGCAAGAATTTCAAGGGGGGACTTTTAGGTGAGTTTACTGCTGAATGCATATATTTCCATGAATGTCGGGAAATTCGCTATTTATCTTTCTTTTTTTTTTTTGCCAAAACCAATAACTCCGGGCTTTGTACAACCCCTTGCAGCATTTCAAACTTAGGAATGTATCCTGTGGATAAATTCTGTGCTATTATAAATCCCCCACAGGTTCTCTCTCTCTCTCTCTCTCTCTCTCATACACACGCGCGCACACAGCCCAGTATTTACAACATCTAATTAACTGGCCTTGTGTATAAATGAAATTGGTTAAGTTTTTACCTTGTATTAGGGGTGAATGATGGCAGTTAAGAGCAAATAAGCTTACTGTCACTCACAGAAGAGAAAGTTATATGATGCATAAGTAGTTACACAAGACAGGATACTGTTAAATATACAATCATTAGAGAGAATTTTGGGTAGCTCACATTATTGAAAATATAATTGATTCTTGTGGGGACTGTATAAGACCCAATAAAGCACCATTAAGAAGGGTTGATTGGATAGAAGATATGTGTTGGGTGTTTGTGGGGACTGTAGAAAACCCAATAAAGCAATAAGAGGGGTTGATTGGATAGAAGACTGTCCAATAATTAAGTATGGGGGGACCGAGAAAAAACTGTAGGTCAAACCATTATAAGAGAGTTGGAGATGAATGATTTATTTGTGAATTTTAAATAGAAAAAGGATAAGACATTATTCTACCGTATAATATGTAGCCAATCCCACCTTGTTCGGAAAAGTCTTGGTTATCATCATTGTTGTATAGGGGAGAATTTAGTCAAATGGGTTGTATATCTGCCTTGTGCAGGTCCAATTCCATTCAATTACCCACAAGTAGATTAATGAATATATACAACTTTTATTAAAATCAGTAAAAAAAAAAAAAAATCTTATTAAGATTCTACCAAATTTTGTTGTATTTTGCCTGTGATCTCGGTTAATTTCTACTTTTCTTTTATTTCCAATGTTTTTTCATTCACTTTTTGAAGATGATATGATAAACCAGCTTACATCTTTTTCTACTCGTCTATTTACCATTTCAACGAAGGAGCAAAGTATCGTGGTGAACAAAGGATGATTGTCACCTAATTTGATTTTCTTTAATAGAAAGAAAGGAAATTATAACTGAAGATTTTGTTTTTACAGCTATCTTAAATAATAGTCACTTAGTCGCATACCTTTCATGAAATTACTCCTATTTTTTTTTTTTACTTATTTCCCTATTTTGTAATCGTATCGTCAAAGATGTTTCATTTCAGAATGCTTGTTTTATTGATCCGAGAAACAGTTGCCCAAGTTTTCAATCCCTTTGGGGCCTGGATTTCAAAATGATTCAAGTGTTCTGTTGCTTTGTATTAATATAGCTTTTTATTAATTTGTATATCATTTGCTGCAGGCTTGCATTCTTGCCGTAGGGAGAGGCAACAAAGTAGTTGAAGCAGTAATTGGAGCTGATGGTATAAATTTATGGATGTTCTGTATGCCACTTAATGCTTAAACTTTAACTTGTTTTGACATTGATTTTTATTTGCTAGGAATTGAGAAGCCATCTGTTGCCACTAAGTTGAACTTAACATTGTCTGCCGATCATCGCGTCTTTGATGGCAAAGTTGGAGGTATGTGTAATTGGAATACTTTAATTAGGTAATAGGAAGTATGAAGGCACACATGATGATATTTTGTTTATAGATTATATGCTTGTTGACATGTGATAATATATGCCATATAGGTGACTTTTTATGTGCGGACAAATTATTTCTGGGATTAATATTGGGAAAATGACCCAAAAAGAAGATTGGATCACTACTAAAGACATGTTTGGTTTTGGAGATGTTTGGTTTTGGAGAATGTTTTCTGTTTTCAAAGATTTGTATAGGGAACATTTGAAACAAAAAAAATATTTATTTTTATCATTTCCTATACAAATCTTTGAAAATATTAAGCAGAGTAAAAACAAGGTGGTTGTTTGTAATTAAAAGTGAAAATCGGAACCATTAATACTTCATTGAGGCACATAAAATGTTACTTTCCCATTAATAATTGACATATTGAATAGAACCTATGAACCATTATTGCAGCGTTCCACCTTTTAAAGGCTGGCTTATGTGGTTTATCTCTATTTTGCAGGTGCATTTCTCTCTGCTCTTCAGTCAAACTTCAAAGATATAAGACGACTTCTTTTATAA
Protein sequence

>MS.gene20005.t1

MALSRLRHPLISHSIRILSSSTRSISRTPNSRIYSIIGNGNLRPASWSGLTGVCNRPLKSRWIDVKFFSSSDFPHEVLGMPALSPTMTQGNIAKWRKKEGDKIAVGDILCEIETDKATLEFESLEEGFLAKILVPDGSKDVPVGQPIAITVEEESDIQNVPASVGGESGVEEKKPAHQDDAVEERKPETTSTIDTSNLPPHIVLGMPALSPTMNQGNIAKWNKKEGDKIEVGDILCEIETDKATLEFESLEEGYLAKIVAPEGSKEVAVGQPIAITVEDASDIEAVKNSISSSSVNQKEKTTQHDTKSEVKTKKTNTARISPAAKLLILEYGLDASTLNATGPHGTLLKGDVLSAIKSGKLSSKPASSKEKASSSQSHQVATSQESKSSLKQSDTYDDFPNSQIRKVIAKRLLESKQNTPHLYLSSDVTLDPLLSLRKDLKEQYDVKVSVNDIIIKVVAAALKNVPEANAYWNDEKGEIILRDSVDISIAVATEKGLMTPILKNADHKTISAISSEVKELAAKAREGKLKPQEFQGGTFSISNLGMYPVDKFCAIINPPQACILAVGRGNKVVEAVIGADGIEKPSVATKLNLTLSADHRVFDGKVGGAFLSALQSNFKDIRRLLL