AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20650.t1 MTR_6g007757 92.453 371 21 2 1 370 1 365 0.0 645
MS.gene20650.t1 MTR_6g007743 79.459 370 69 2 1 370 1 363 0.0 580
MS.gene20650.t1 MTR_6g007747 79.459 370 67 2 1 370 1 361 0.0 564
MS.gene20650.t1 MTR_6g007750 79.301 372 69 3 1 370 1 366 0.0 552
MS.gene20650.t1 MTR_6g007740 77.778 369 75 2 1 369 1 362 0.0 541
MS.gene20650.t1 MTR_6g007753 79.819 332 60 2 40 370 322 647 1.78e-179 513
MS.gene20650.t1 MTR_6g007753 67.297 370 74 3 1 370 1 323 2.82e-161 467
MS.gene20650.t1 MTR_6g007757 91.985 262 15 1 1 262 1 256 2.33e-168 471
MS.gene20650.t1 MTR_0103s0090 54.865 370 161 4 1 370 1 364 1.03e-137 397
MS.gene20650.t1 MTR_6g007760 56.369 314 132 3 1 314 1 309 3.79e-115 337
MS.gene20650.t1 MTR_0103s0090 55.957 277 118 2 94 370 1 273 5.65e-106 312
MS.gene20650.t1 MTR_1g014510 43.429 350 195 2 8 355 7 355 1.31e-93 287
MS.gene20650.t1 MTR_4g106720 40.909 352 201 5 7 356 6 352 3.01e-81 252
MS.gene20650.t1 MTR_3g090550 43.402 341 180 7 21 360 15 343 8.01e-81 251
MS.gene20650.t1 MTR_5g034980 43.887 319 175 3 17 335 12 326 4.30e-79 246
MS.gene20650.t1 MTR_5g034990 40.909 330 185 5 28 356 30 350 7.12e-74 233
MS.gene20650.t1 MTR_5g034910 42.258 310 169 3 29 335 24 326 6.43e-71 225
MS.gene20650.t1 MTR_5g034930 41.121 321 185 3 15 335 9 325 5.48e-69 221
MS.gene20650.t1 MTR_5g034970 41.121 321 172 4 15 335 10 313 2.20e-62 203
MS.gene20650.t1 MTR_3g095460 33.531 337 219 3 13 347 6 339 1.95e-51 175
MS.gene20650.t1 MTR_3g072560 35.093 322 184 6 37 349 43 348 2.45e-50 173
MS.gene20650.t1 MTR_2g027030 36.061 330 202 6 9 334 8 332 5.18e-50 172
MS.gene20650.t1 MTR_2g007990 34.169 319 191 9 30 339 33 341 1.10e-49 172
MS.gene20650.t1 MTR_2g007970 36.218 312 191 5 30 338 30 336 2.49e-49 171
MS.gene20650.t1 MTR_5g034980 41.463 246 140 3 17 262 12 253 9.21e-49 167
MS.gene20650.t1 MTR_8g041390 31.975 319 210 5 32 346 33 348 1.41e-48 169
MS.gene20650.t1 MTR_1g068630 35.390 308 188 6 30 334 33 332 1.73e-48 167
MS.gene20650.t1 MTR_4g094340 32.471 348 224 6 13 354 10 352 2.21e-47 164
MS.gene20650.t1 MTR_3g012420 34.395 314 194 7 38 346 43 349 2.70e-47 165
MS.gene20650.t1 MTR_4g094340 32.471 348 224 6 13 354 28 370 4.28e-47 164
MS.gene20650.t1 MTR_3g095450 30.172 348 223 5 25 367 20 352 5.04e-47 164
MS.gene20650.t1 MTR_0096s0100 29.688 320 215 5 37 354 43 354 2.28e-46 162
MS.gene20650.t1 MTR_3g072500 33.962 318 192 7 37 345 45 353 5.93e-46 162
MS.gene20650.t1 MTR_8g092650 33.138 341 218 4 13 347 6 342 2.01e-45 159
MS.gene20650.t1 MTR_4g094362 31.988 322 209 6 30 346 32 348 3.59e-45 159
MS.gene20650.t1 MTR_1g074020 35.275 309 182 9 37 340 38 333 1.08e-44 157
MS.gene20650.t1 MTR_2g007960 31.361 338 219 6 26 355 26 358 1.34e-44 158
MS.gene20650.t1 MTR_2g016710 30.719 306 204 3 30 334 26 324 1.80e-44 157
MS.gene20650.t1 MTR_1g030400 32.571 350 208 8 32 360 27 369 2.18e-44 157
MS.gene20650.t1 MTR_1g030580 32.399 321 201 5 37 353 41 349 2.44e-44 157
MS.gene20650.t1 MTR_1g030600 30.671 313 210 5 37 347 43 350 2.50e-44 157
MS.gene20650.t1 MTR_3g072530 32.381 315 199 6 38 346 40 346 3.87e-44 156
MS.gene20650.t1 MTR_1g074120 31.519 349 227 8 8 353 12 351 6.21e-44 155
MS.gene20650.t1 MTR_1g038560 31.803 305 191 7 37 335 28 321 8.92e-44 154
MS.gene20650.t1 MTR_7g111830 30.857 350 215 7 32 357 27 373 1.45e-43 155
MS.gene20650.t1 MTR_3g095420 28.060 335 233 3 10 339 5 336 2.13e-43 154
MS.gene20650.t1 MTR_6g036450 33.750 320 201 6 25 339 31 344 8.03e-43 152
MS.gene20650.t1 MTR_1g074160 32.484 314 193 7 32 338 33 334 1.07e-42 152
MS.gene20650.t1 MTR_3g072500 35.938 256 151 4 97 345 1 250 1.72e-42 150
MS.gene20650.t1 MTR_2g102340 32.523 329 203 9 30 349 30 348 4.17e-42 151
MS.gene20650.t1 MTR_1g070175 29.653 317 210 5 30 345 34 338 1.03e-41 150
MS.gene20650.t1 MTR_2g007260 33.754 317 189 5 30 334 32 339 2.41e-41 150
MS.gene20650.t1 MTR_8g006010 31.765 340 210 4 32 367 30 351 3.56e-41 149
MS.gene20650.t1 MTR_1g073990 32.326 331 214 5 8 335 12 335 1.22e-40 147
MS.gene20650.t1 MTR_4g094340 34.191 272 172 4 88 354 17 286 1.56e-40 145
MS.gene20650.t1 MTR_1g114210 30.619 307 204 6 30 334 29 328 1.78e-40 146
MS.gene20650.t1 MTR_4g094360 30.861 337 217 7 30 356 32 362 2.25e-40 147
MS.gene20650.t1 MTR_1g051120 31.728 353 220 11 8 350 12 353 4.45e-40 145
MS.gene20650.t1 MTR_4g094342 30.368 326 222 4 30 352 31 354 8.95e-40 144
MS.gene20650.t1 MTR_7g100050 32.468 308 199 6 30 334 31 332 1.36e-39 144
MS.gene20650.t1 MTR_1g074070 33.439 314 191 11 32 340 36 336 7.83e-39 142
MS.gene20650.t1 MTR_4g129650 28.919 370 240 9 12 367 8 368 1.89e-37 139
MS.gene20650.t1 MTR_1g023180 31.173 324 197 8 32 335 41 358 2.17e-37 139
MS.gene20650.t1 MTR_3g095440 30.530 321 211 5 25 339 20 334 2.62e-37 138
MS.gene20650.t1 MTR_4g094360 31.715 309 196 7 71 370 26 328 1.42e-36 136
MS.gene20650.t1 MTR_2g065550 30.245 367 240 7 6 364 3 361 1.79e-36 136
MS.gene20650.t1 MTR_6g081840 31.449 283 189 4 71 350 67 347 4.57e-36 135
MS.gene20650.t1 MTR_4g094352 31.833 311 204 6 30 334 30 338 6.15e-36 135
MS.gene20650.t1 MTR_3g112480 29.942 344 224 7 32 361 40 380 1.29e-35 134
MS.gene20650.t1 MTR_8g006120 32.362 309 198 6 36 339 34 336 1.53e-34 131
MS.gene20650.t1 MTR_2g016710 29.225 284 193 3 30 312 26 302 1.87e-34 129
MS.gene20650.t1 MTR_8g006090 32.827 329 210 6 32 354 31 354 1.97e-33 127
MS.gene20650.t1 MTR_3g112480 30.449 312 199 7 64 361 18 325 2.97e-33 127
MS.gene20650.t1 MTR_8g092650 31.950 241 157 2 112 347 26 264 3.38e-33 125
MS.gene20650.t1 MTR_5g089390 28.939 311 199 7 46 348 48 344 2.58e-32 124
MS.gene20650.t1 MTR_8g006050 31.385 325 200 8 22 342 4 309 2.17e-31 122
MS.gene20650.t1 MTR_5g021160 29.393 313 195 6 41 334 22 327 1.28e-30 120
MS.gene20650.t1 MTR_3g072520 29.193 322 220 6 34 351 31 348 1.56e-30 120
MS.gene20650.t1 MTR_4g094360 29.221 308 207 6 10 312 12 313 1.64e-30 119
MS.gene20650.t1 MTR_4g129650 29.213 267 174 5 110 367 1 261 3.82e-30 116
MS.gene20650.t1 MTR_1g052205 31.557 244 148 7 117 354 2 232 1.01e-29 115
MS.gene20650.t1 MTR_5g069040 28.571 336 221 8 36 359 42 370 2.54e-29 117
MS.gene20650.t1 MTR_8g006090 32.794 247 159 3 112 354 31 274 4.14e-29 114
MS.gene20650.t1 MTR_5g068790 27.619 315 195 5 36 334 42 339 6.04e-29 115
MS.gene20650.t1 MTR_3g019050 32.472 271 175 6 94 359 99 366 7.82e-29 115
MS.gene20650.t1 MTR_5g025290 27.671 365 226 11 25 362 16 369 9.77e-29 115
MS.gene20650.t1 MTR_5g025290 27.671 365 226 11 25 362 44 397 1.15e-28 115
MS.gene20650.t1 MTR_5g025340 29.167 336 210 9 23 335 13 343 4.13e-28 114
MS.gene20650.t1 MTR_1g014790 43.902 123 68 1 89 211 39 160 4.17e-28 109
MS.gene20650.t1 MTR_5g021160 30.992 242 158 3 97 334 8 244 6.96e-28 110
MS.gene20650.t1 MTR_5g025400 27.701 361 220 10 23 350 14 366 2.88e-27 111
MS.gene20650.t1 MTR_5g025370 27.114 343 221 8 32 354 30 363 4.37e-27 110
MS.gene20650.t1 MTR_3g095440 30.864 243 154 6 25 260 20 255 5.47e-27 108
MS.gene20650.t1 MTR_5g025330 27.731 357 229 9 32 369 29 375 5.70e-26 109
MS.gene20650.t1 MTR_4g094340 30.078 256 171 5 13 265 10 260 3.79e-25 103
MS.gene20650.t1 MTR_8g072350 26.347 334 218 9 25 335 14 342 5.59e-25 105
MS.gene20650.t1 MTR_4g094340 30.078 256 171 5 13 265 28 278 1.05e-24 102
MS.gene20650.t1 MTR_1g074160 30.932 236 144 7 32 260 33 256 1.50e-24 101
MS.gene20650.t1 MTR_5g012650 31.613 310 190 11 55 354 51 348 2.76e-24 102
MS.gene20650.t1 MTR_3g072500 30.901 233 145 6 37 262 45 268 1.04e-23 99.8
MS.gene20650.t1 MTR_3g112480 29.528 254 165 5 121 361 1 253 3.42e-23 97.8
MS.gene20650.t1 MTR_4g100840 28.528 326 200 11 38 346 40 349 3.47e-22 96.7
MS.gene20650.t1 MTR_8g006090 30.035 283 191 4 32 312 31 308 4.19e-22 95.5
MS.gene20650.t1 MTR_2g102340 29.707 239 152 8 30 262 56 284 2.50e-20 90.9
MS.gene20650.t1 MTR_4g094340 32.836 201 127 5 13 210 28 223 7.08e-19 84.7
MS.gene20650.t1 MTR_3g072530 28.346 254 144 7 38 256 40 290 1.44e-18 85.5
MS.gene20650.t1 MTR_3g072500 32.787 183 107 6 37 212 45 218 1.76e-17 80.9
MS.gene20650.t1 MTR_5g021160 28.384 229 138 6 41 250 22 243 1.90e-17 82.0
MS.gene20650.t1 MTR_1g051120 31.217 189 116 7 32 215 36 215 3.62e-16 77.0
MS.gene20650.t1 MTR_8g006090 30.952 252 160 6 32 281 31 270 3.78e-16 78.6
MS.gene20650.t1 MTR_1g051120 30.189 159 106 3 8 164 12 167 3.07e-15 75.5
MS.gene20650.t1 MTR_4g094342 28.962 183 125 4 30 209 31 211 8.99e-14 70.9
MS.gene20650.t1 MTR_8g006090 30.000 170 109 3 112 281 31 190 4.57e-12 65.5
MS.gene20650.t1 MTR_1g061900 50.633 79 26 3 140 218 46 111 7.02e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20650.t1 AT3G28050 45.845 373 180 8 1 360 1 364 4.23e-103 308
MS.gene20650.t1 AT5G40240 46.286 350 173 6 5 346 11 353 8.93e-97 293
MS.gene20650.t1 AT5G40240 46.286 350 173 6 5 346 11 353 8.93e-97 293
MS.gene20650.t1 AT5G40240 46.286 350 173 6 5 346 25 367 2.30e-96 292
MS.gene20650.t1 AT5G40230 42.700 363 195 4 2 360 9 362 1.43e-93 284
MS.gene20650.t1 AT5G40210 40.469 341 181 4 20 359 20 339 6.27e-81 251
MS.gene20650.t1 AT4G15540 42.029 345 183 4 2 344 5 334 5.07e-77 241
MS.gene20650.t1 AT4G15540 42.029 345 183 4 2 344 5 334 5.07e-77 241
MS.gene20650.t1 AT3G28080 41.092 348 192 6 17 360 18 356 2.56e-69 222
MS.gene20650.t1 AT3G28130 41.888 339 186 6 17 350 17 349 4.48e-69 221
MS.gene20650.t1 AT3G28100 41.401 314 174 5 29 338 30 337 2.02e-67 217
MS.gene20650.t1 AT3G28070 40.179 336 187 6 29 360 33 358 8.28e-64 207
MS.gene20650.t1 AT3G28080 39.655 348 189 6 17 360 18 348 1.25e-62 204
MS.gene20650.t1 AT3G28080 41.176 272 148 5 93 360 4 267 3.63e-57 187
MS.gene20650.t1 AT3G28080 41.176 272 148 5 93 360 4 267 3.63e-57 187
MS.gene20650.t1 AT3G28080 41.176 272 148 5 93 360 4 267 3.63e-57 187
MS.gene20650.t1 AT3G28080 41.176 272 148 5 93 360 4 267 3.63e-57 187
MS.gene20650.t1 AT3G28070 39.706 272 151 5 93 360 4 266 4.18e-57 187
MS.gene20650.t1 AT3G28130 43.902 246 129 4 93 334 6 246 3.09e-55 182
MS.gene20650.t1 AT3G28130 43.902 246 129 4 93 334 6 246 3.09e-55 182
MS.gene20650.t1 AT1G21890 35.494 324 192 7 37 346 35 355 1.76e-54 184
MS.gene20650.t1 AT4G08300 36.076 316 192 6 37 346 35 346 2.74e-54 183
MS.gene20650.t1 AT3G28070 40.278 288 162 5 29 312 33 314 1.98e-50 171
MS.gene20650.t1 AT1G44800 34.839 310 180 6 37 337 35 331 2.88e-49 170
MS.gene20650.t1 AT3G30340 32.362 309 200 4 30 335 28 330 1.74e-48 168
MS.gene20650.t1 AT5G07050 35.256 312 178 6 38 335 43 344 4.68e-48 167
MS.gene20650.t1 AT1G70260 31.534 352 223 4 10 350 9 353 5.99e-48 167
MS.gene20650.t1 AT2G40900 32.680 306 191 5 37 339 35 328 5.59e-46 162
MS.gene20650.t1 AT2G39510 34.810 316 199 5 32 345 27 337 4.02e-45 159
MS.gene20650.t1 AT3G28100 42.194 237 128 4 29 261 30 261 2.05e-44 154
MS.gene20650.t1 AT1G21890 34.737 285 175 5 37 313 35 316 3.82e-44 156
MS.gene20650.t1 AT3G56620 32.107 299 187 6 37 331 35 321 4.03e-44 157
MS.gene20650.t1 AT5G13670 30.422 332 219 9 21 345 16 342 4.12e-44 156
MS.gene20650.t1 AT3G28130 40.726 248 138 4 17 260 17 259 6.07e-43 150
MS.gene20650.t1 AT2G37460 33.117 308 195 6 30 334 32 331 7.06e-43 153
MS.gene20650.t1 AT4G08290 31.231 333 202 6 34 353 33 351 7.60e-43 153
MS.gene20650.t1 AT3G28080 37.815 238 136 5 127 360 1 230 1.81e-42 148
MS.gene20650.t1 AT5G64700 33.981 309 197 3 32 335 27 333 2.13e-42 151
MS.gene20650.t1 AT1G01070 32.143 308 201 5 30 334 33 335 3.39e-42 151
MS.gene20650.t1 AT1G60050 29.508 366 242 7 1 354 4 365 8.51e-42 150
MS.gene20650.t1 AT3G28070 35.714 238 140 5 127 360 1 229 2.14e-41 145
MS.gene20650.t1 AT4G01430 29.721 323 213 7 30 345 26 341 2.28e-41 149
MS.gene20650.t1 AT4G28040 32.399 321 199 5 32 350 27 331 4.30e-41 148
MS.gene20650.t1 AT4G28040 32.399 321 199 5 32 350 27 331 4.30e-41 148
MS.gene20650.t1 AT4G28040 32.399 321 199 5 32 350 27 331 4.30e-41 148
MS.gene20650.t1 AT4G28040 32.399 321 199 5 32 350 27 331 4.30e-41 148
MS.gene20650.t1 AT4G28040 32.399 321 199 5 32 350 27 331 4.30e-41 148
MS.gene20650.t1 AT1G11450 29.762 336 226 6 13 345 15 343 8.42e-41 147
MS.gene20650.t1 AT3G28130 41.038 212 116 4 127 334 1 207 1.94e-40 143
MS.gene20650.t1 AT1G09380 31.410 312 190 5 32 331 27 326 1.97e-40 147
MS.gene20650.t1 AT1G01070 32.246 276 180 4 61 334 18 288 1.81e-39 143
MS.gene20650.t1 AT1G11450 30.464 302 201 5 46 345 5 299 2.86e-38 139
MS.gene20650.t1 AT3G18200 32.323 297 184 5 61 349 84 371 4.40e-38 140
MS.gene20650.t1 AT1G43650 33.123 317 203 4 30 345 24 332 6.73e-38 139
MS.gene20650.t1 AT1G11450 30.201 298 199 5 50 345 2 292 4.33e-37 136
MS.gene20650.t1 AT3G28080 36.531 271 108 5 93 360 4 213 7.72e-37 133
MS.gene20650.t1 AT1G68170 33.119 311 195 6 30 334 30 333 1.15e-36 136
MS.gene20650.t1 AT1G68170 33.226 310 194 6 31 334 21 323 1.35e-36 136
MS.gene20650.t1 AT1G11460 28.615 325 224 5 13 334 15 334 1.87e-36 135
MS.gene20650.t1 AT3G28100 46.809 188 92 3 29 213 30 212 5.01e-36 132
MS.gene20650.t1 AT3G28130 44.221 199 103 3 17 212 17 210 7.17e-35 127
MS.gene20650.t1 AT1G75500 28.000 325 224 4 32 351 39 358 7.75e-35 132
MS.gene20650.t1 AT1G75500 28.000 325 224 4 32 351 39 358 7.75e-35 132
MS.gene20650.t1 AT4G30420 31.090 312 205 4 28 334 13 319 1.11e-34 131
MS.gene20650.t1 AT4G30420 31.090 312 205 4 28 334 23 329 1.12e-34 131
MS.gene20650.t1 AT1G25270 30.032 313 211 5 26 335 16 323 2.17e-34 130
MS.gene20650.t1 AT4G01440 28.662 314 206 8 36 340 32 336 3.19e-34 130
MS.gene20650.t1 AT3G53210 30.872 298 201 4 38 334 35 328 3.72e-34 130
MS.gene20650.t1 AT1G11450 31.373 255 169 3 92 345 2 251 6.20e-33 124
MS.gene20650.t1 AT4G01430 28.966 290 192 7 30 312 26 308 1.24e-32 124
MS.gene20650.t1 AT3G28080 44.898 196 100 3 17 209 18 208 3.15e-32 123
MS.gene20650.t1 AT3G28080 42.697 89 48 1 272 360 217 302 6.07e-15 75.1
MS.gene20650.t1 AT3G18200 33.198 247 152 3 110 349 1 241 1.88e-31 120
MS.gene20650.t1 AT5G45370 27.844 334 220 6 32 361 39 355 1.47e-30 120
MS.gene20650.t1 AT2G37450 29.909 331 196 8 37 365 33 329 2.74e-30 119
MS.gene20650.t1 AT1G11450 27.723 303 210 5 13 312 15 311 3.12e-30 118
MS.gene20650.t1 AT2G37450 32.707 266 165 6 102 365 4 257 7.92e-30 115
MS.gene20650.t1 AT5G45370 27.457 346 230 7 32 361 39 379 2.20e-29 117
MS.gene20650.t1 AT5G45370 27.457 346 230 7 32 361 39 379 2.20e-29 117
MS.gene20650.t1 AT3G53210 30.508 236 162 2 99 334 38 271 3.06e-29 115
MS.gene20650.t1 AT3G30340 30.932 236 154 4 30 262 28 257 2.57e-28 112
MS.gene20650.t1 AT4G01440 27.622 286 192 7 36 315 32 308 4.99e-28 112
MS.gene20650.t1 AT4G01440 27.826 230 158 3 115 340 3 228 6.66e-27 107
MS.gene20650.t1 AT4G01440 27.826 230 158 3 115 340 3 228 6.66e-27 107
MS.gene20650.t1 AT5G64700 33.761 234 148 3 32 260 27 258 3.24e-26 106
MS.gene20650.t1 AT4G08290 31.933 238 135 6 34 258 33 256 1.47e-25 104
MS.gene20650.t1 AT5G47470 30.479 292 176 9 73 354 117 391 1.99e-25 106
MS.gene20650.t1 AT5G47470 30.479 292 176 9 73 354 89 363 2.28e-25 105
MS.gene20650.t1 AT4G19185 26.807 332 219 6 25 335 25 353 1.31e-24 104
MS.gene20650.t1 AT5G47470 30.072 276 167 8 73 338 117 376 4.81e-24 102
MS.gene20650.t1 AT4G01450 26.765 340 233 5 13 348 10 337 1.54e-23 100
MS.gene20650.t1 AT4G01430 28.365 208 141 3 142 345 1 204 2.81e-23 97.1
MS.gene20650.t1 AT3G45870 25.077 323 228 6 17 329 16 334 5.37e-23 99.4
MS.gene20650.t1 AT4G19185 26.459 257 176 3 91 335 20 275 1.42e-22 97.4
MS.gene20650.t1 AT5G45370 26.429 280 188 5 97 361 1 277 9.62e-22 94.0
MS.gene20650.t1 AT5G45370 26.429 280 188 5 97 361 1 277 9.62e-22 94.0
MS.gene20650.t1 AT4G01450 26.316 304 208 5 13 312 10 301 2.43e-21 94.4
MS.gene20650.t1 AT3G28060 39.024 123 73 2 191 312 33 154 3.57e-21 89.4
MS.gene20650.t1 AT2G37450 30.579 242 154 6 126 365 61 290 3.57e-21 92.8
MS.gene20650.t1 AT4G24980 26.894 264 143 6 73 335 25 239 4.77e-21 92.0
MS.gene20650.t1 AT1G43650 33.624 229 143 4 32 259 26 246 1.01e-20 90.9
MS.gene20650.t1 AT4G01440 29.437 231 148 7 36 260 32 253 1.50e-20 90.5
MS.gene20650.t1 AT3G53210 30.841 214 143 4 38 250 35 244 2.80e-20 89.7
MS.gene20650.t1 AT4G01450 26.984 252 168 5 13 260 10 249 1.31e-18 85.1
MS.gene20650.t1 AT4G16620 29.961 257 143 7 99 338 1 237 5.85e-18 83.2
MS.gene20650.t1 AT4G16620 29.961 257 143 7 99 338 1 237 5.85e-18 83.2
MS.gene20650.t1 AT4G16620 30.263 304 173 9 54 338 51 334 1.39e-17 83.6
MS.gene20650.t1 AT3G45870 23.529 306 220 6 17 312 16 317 2.44e-17 82.4
MS.gene20650.t1 AT4G01450 29.665 209 131 5 13 217 10 206 1.05e-15 76.3
MS.gene20650.t1 AT5G45370 24.900 249 169 5 128 361 74 319 3.86e-14 73.2
MS.gene20650.t1 AT3G45870 23.770 244 172 5 95 329 21 259 5.03e-13 69.7
MS.gene20650.t1 AT3G28070 51.020 98 47 1 29 126 33 129 1.34e-11 63.9
MS.gene20650.t1 AT3G45870 23.361 244 174 5 17 250 16 256 1.62e-11 64.7

Find 72 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGCTAGCTGTCACTTTC+AGG 0.143153 6.3:+3784959 MS.gene20650:CDS
TTGCCACCTGCTGTGATTAT+AGG 0.202273 6.3:+3782191 MS.gene20650:CDS
AATGCAAGTGCTTGGAAAAT+AGG 0.233257 6.3:+3786539 MS.gene20650:CDS
GCCTGGGCAATACACTTAAA+AGG 0.240912 6.3:+3787112 MS.gene20650:CDS
CAGATGTGTATCTCAGATTC+TGG 0.249223 6.3:+3784864 MS.gene20650:intron
AGAGGAAGATGTTGGTAGTT+TGG 0.251289 6.3:+3787611 MS.gene20650:CDS
AGTAGTAATGCTAAGGTAAT+TGG 0.253696 6.3:+3785593 MS.gene20650:CDS
TTGGTCTTTATGCTGTATTA+TGG 0.276154 6.3:+3787568 MS.gene20650:CDS
AACACTAAAGTTAGTTCATC+TGG 0.290450 6.3:-3786458 None:intergenic
TATGCAAAAGTGTGCTTCTT+GGG 0.297599 6.3:+3782658 MS.gene20650:CDS
AAGACCAATTGAGATTATTA+TGG 0.308192 6.3:-3787553 None:intergenic
TGGCAAAACTTCCATGTAAA+AGG 0.311215 6.3:-3782174 None:intergenic
TGGTCTTTATGCTGTATTAT+GGG 0.328682 6.3:+3787569 MS.gene20650:CDS
AGTGTGCTTCTTGGGGCAAT+AGG 0.339967 6.3:+3782666 MS.gene20650:CDS
TTCAAAGCAGCTACACTTCA+AGG 0.348163 6.3:+3782248 MS.gene20650:CDS
ATATGCAAAAGTGTGCTTCT+TGG 0.358268 6.3:+3782657 MS.gene20650:CDS
TGCAAATTGTTATCTCCGTT+TGG 0.371860 6.3:+3787164 MS.gene20650:CDS
ACTCATCTCTATTATTTCTT+CGG 0.375116 6.3:+3786574 MS.gene20650:CDS
GCTCTATAGCTTTGCAAAAG+AGG 0.379932 6.3:-3787657 None:intergenic
CTGTCTATGTAACCTCATTC+AGG 0.400748 6.3:+3787137 MS.gene20650:CDS
CATATAATGGAGAAACTGAT+TGG 0.401125 6.3:-3782639 None:intergenic
TCAAGTCTGTGGATTCAAGC+TGG 0.406376 6.3:+3785729 MS.gene20650:CDS
GATTCAAGCTGGGCCATTGC+TGG 0.410455 6.3:+3785740 MS.gene20650:CDS
ATTGTTATCTCCGTTTGGTT+GGG 0.417427 6.3:+3787169 MS.gene20650:CDS
TGGTTGGGCTTTATATTCCT+TGG 0.425071 6.3:+3787184 MS.gene20650:CDS
AATTGTTATCTCCGTTTGGT+TGG 0.428125 6.3:+3787168 MS.gene20650:CDS
TGATATGATGGTGGCAGTTA+TGG 0.433113 6.3:-3786489 None:intergenic
ATTGCCTATGCTTATGCTGT+TGG 0.435829 6.3:+3782290 MS.gene20650:CDS
GTGTGCTTCTTGGGGCAATA+GGG 0.444672 6.3:+3782667 MS.gene20650:CDS
CCTGGGCAATACACTTAAAA+GGG 0.446899 6.3:+3787113 MS.gene20650:CDS
CTTGGCGATACTCTTCATCT+TGG 0.450609 6.3:+3787202 MS.gene20650:CDS
GGAGCCATAATAATCTCAAT+TGG 0.466604 6.3:+3787549 MS.gene20650:CDS
CAAAGCAACAGAAGAGATAG+AGG 0.466891 6.3:+3787593 MS.gene20650:CDS
AGAGGTGCATTCTCTATAGA+TGG 0.468724 6.3:-3787639 None:intergenic
AGATGTGTATCTCAGATTCT+GGG 0.468848 6.3:+3784865 MS.gene20650:intron
CAGTTCCTAATGCAAGTGCT+TGG 0.477331 6.3:+3786531 MS.gene20650:CDS
TAGGCAATATAGTTTCTGCC+TGG 0.481099 6.3:+3787095 MS.gene20650:CDS
CTTCTTGTGAAAAGAGTGAC+AGG 0.490975 6.3:-3782329 None:intergenic
GAAGAGATAGAGGAAGATGT+TGG 0.505673 6.3:+3787603 MS.gene20650:CDS
ACAGACTTGAGAAAGTCAAT+TGG 0.519975 6.3:-3785716 None:intergenic
GCGATACTCTTCATCTTGGA+AGG 0.527441 6.3:+3787206 MS.gene20650:CDS
CAAGTCTGTGGATTCAAGCT+GGG 0.528710 6.3:+3785730 MS.gene20650:CDS
AGTATAAGATGAATTCATGA+TGG 0.534670 6.3:-3785669 None:intergenic
GAATATAAAGCCCAACCAAA+CGG 0.535719 6.3:-3787179 None:intergenic
AATTGACTTTCTCAAGTCTG+TGG 0.542290 6.3:+3785718 MS.gene20650:CDS
AGGCAATATAGTTTCTGCCT+GGG 0.551084 6.3:+3787096 MS.gene20650:CDS
GCAATTGCTGAAGCAAGTGT+TGG 0.552785 6.3:-3784913 None:intergenic
GGAAGCATAATATCAATAGC+AGG 0.554009 6.3:+3785614 MS.gene20650:CDS
GGTCTTTATGCTGTATTATG+GGG 0.556844 6.3:+3787570 MS.gene20650:CDS
AATTTGCAGTGGCCTGAATG+AGG 0.562318 6.3:-3787149 None:intergenic
AGCTACAACTGTTGATATGA+TGG 0.566150 6.3:-3786501 None:intergenic
AGAGAAACATGACAAGAAGA+TGG 0.567431 6.3:+3782150 None:intergenic
AGTGAAAGCAGGTAACAGAT+TGG 0.571040 6.3:-3784935 None:intergenic
GAGTAAAAGTAGTAATGCTA+AGG 0.571193 6.3:+3785586 MS.gene20650:CDS
AAGTCAATTGGTTGATGAAG+TGG 0.572248 6.3:-3785704 None:intergenic
ATGCAAAAGTGTGCTTCTTG+GGG 0.582659 6.3:+3782659 MS.gene20650:CDS
ACACTAAAGTTAGTTCATCT+GGG 0.582689 6.3:-3786457 None:intergenic
TCATTGCCTATAATCACAGC+AGG 0.598096 6.3:-3782197 None:intergenic
GCTAGCATGAAAGTGAAAGC+AGG 0.612594 6.3:-3784946 None:intergenic
TGTCAGCAGAATACCAGCAA+TGG 0.614267 6.3:-3785753 None:intergenic
AGGCAATGAATGTATTGACA+TGG 0.619785 6.3:+3782211 MS.gene20650:CDS
ATAATGGAGAAACTGATTGG+AGG 0.623114 6.3:-3782636 None:intergenic
TTTGTGTTGACTTTCTACAA+AGG 0.624165 6.3:+3785641 MS.gene20650:CDS
GATGTGTATCTCAGATTCTG+GGG 0.638414 6.3:+3784866 MS.gene20650:intron
AGTACCAACAGCATAAGCAT+AGG 0.650265 6.3:-3782294 None:intergenic
TTGCCTATAATCACAGCAGG+TGG 0.650486 6.3:-3782194 None:intergenic
CAAGATGAAGAGTATCGCCA+AGG 0.666505 6.3:-3787201 None:intergenic
CTGGGCAATACACTTAAAAG+GGG 0.679869 6.3:+3787114 MS.gene20650:CDS
ACGGAGATAACAATTTGCAG+TGG 0.704316 6.3:-3787160 None:intergenic
TACAACTGTTGATATGATGG+TGG 0.721627 6.3:-3786498 None:intergenic
AATTGGTTGATGAAGTGGTG+AGG 0.726144 6.3:-3785699 None:intergenic
TTCTTGTGAAAAGAGTGACA+GGG 0.756911 6.3:-3782328 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTTTATTTTAAT+TGG + chr6.3:3784433-3784452 MS.gene20650:intron 0.0%
!! TTACATTGAATTAAAAAAAT+TGG - chr6.3:3783598-3783617 None:intergenic 10.0%
!!! AAATTCCAAAATATAAATTT+TGG - chr6.3:3782480-3782499 None:intergenic 10.0%
!!! TTAGTTTTAGTTTTTTTAAT+TGG + chr6.3:3784374-3784393 MS.gene20650:intron 10.0%
!!! TTTTTTTTTTTTTTTTTCCA+GGG + chr6.3:3787055-3787074 MS.gene20650:intron 10.0%
!! AATGATTAATGAATTTAACA+AGG + chr6.3:3786737-3786756 MS.gene20650:intron 15.0%
!! ATCTATATTTAAACACAATT+CGG - chr6.3:3786850-3786869 None:intergenic 15.0%
!! GAAACAAAAATATACATAAA+TGG - chr6.3:3787510-3787529 None:intergenic 15.0%
!!! AATTTTAAATATCTTCTGTT+AGG - chr6.3:3785393-3785412 None:intergenic 15.0%
!!! ATTTTAAATATCTTCTGTTA+GGG - chr6.3:3785392-3785411 None:intergenic 15.0%
!!! CTTTTTTTTTTTTTTTTTCC+AGG + chr6.3:3787054-3787073 MS.gene20650:intron 15.0%
!!! TAAGTATATGTTTAAAATCA+AGG - chr6.3:3782542-3782561 None:intergenic 15.0%
!!! TTATTTAATTTTTATCCAAG+TGG + chr6.3:3784495-3784514 MS.gene20650:intron 15.0%
!!! TTGATTTTAAACATATACTT+AGG + chr6.3:3782541-3782560 MS.gene20650:intron 15.0%
!!! TTGCTAATTATATTTTAATC+TGG + chr6.3:3784983-3785002 MS.gene20650:intron 15.0%
!!! TTTTGCCAAAATTTATATTT+TGG + chr6.3:3782472-3782491 MS.gene20650:intron 15.0%
!!! TTTTTTTTTTAATATCCACT+TGG - chr6.3:3784513-3784532 None:intergenic 15.0%
!! AATAACAGCTATATATATAG+CGG - chr6.3:3785334-3785353 None:intergenic 20.0%
!! AATTATTGGTGTAAAGTATA+AGG - chr6.3:3782707-3782726 None:intergenic 20.0%
!! CATCATAAGCATAAAATTAA+GGG - chr6.3:3784804-3784823 None:intergenic 20.0%
!! CTTGTAATATAAAGATTTCT+TGG - chr6.3:3784619-3784638 None:intergenic 20.0%
!! GAAATCTTTATATTACAAGT+AGG + chr6.3:3784620-3784639 MS.gene20650:intron 20.0%
!! TAGTACAAATTATTGTCAAA+TGG - chr6.3:3785257-3785276 None:intergenic 20.0%
!! TCAAATCAAACAACAAATTT+AGG - chr6.3:3784114-3784133 None:intergenic 20.0%
!! TCAATCATAAACAATACAAA+TGG - chr6.3:3784139-3784158 None:intergenic 20.0%
!! TCATCATAAGCATAAAATTA+AGG - chr6.3:3784805-3784824 None:intergenic 20.0%
!! TTAGTTAGTTATAGTTACAA+GGG + chr6.3:3783349-3783368 MS.gene20650:intron 20.0%
!! TTGGAATTTGAATAGAATTA+TGG + chr6.3:3782491-3782510 MS.gene20650:intron 20.0%
!!! AACAAATTTAGGTTAGAATT+TGG - chr6.3:3784103-3784122 None:intergenic 20.0%
!!! AATGCAAAATTTAGTTTCAA+AGG - chr6.3:3785022-3785041 None:intergenic 20.0%
!!! ATCTACAAGTTTTTTTTTAC+AGG + chr6.3:3784728-3784747 MS.gene20650:intron 20.0%
!!! CTACAAGTTTTTTTTTTACA+GGG + chr6.3:3784646-3784665 MS.gene20650:intron 20.0%
!!! CTCCAAGTTTTTTTTTTATA+GGG - chr6.3:3783439-3783458 None:intergenic 20.0%
!!! TACAAGTTTTTTTTTTACAG+GGG + chr6.3:3784647-3784666 MS.gene20650:intron 20.0%
!!! TCTACAAGTTTTTTTTTACA+GGG + chr6.3:3784729-3784748 MS.gene20650:intron 20.0%
!!! TCTACAAGTTTTTTTTTTAC+AGG + chr6.3:3784645-3784664 MS.gene20650:intron 20.0%
!!! TCTCCAAGTTTTTTTTTTAT+AGG - chr6.3:3783440-3783459 None:intergenic 20.0%
!!! TGATAAATTAGTGTGTTTTT+TGG - chr6.3:3783808-3783827 None:intergenic 20.0%
! AAAACCAAAGAATCTTCAAA+TGG - chr6.3:3783473-3783492 None:intergenic 25.0%
! AAATTCAACATCAGTTTAGA+TGG + chr6.3:3786676-3786695 MS.gene20650:intron 25.0%
! AAGACCAATTGAGATTATTA+TGG - chr6.3:3787556-3787575 None:intergenic 25.0%
! AATAAACACAAATGCTTAAG+TGG - chr6.3:3787027-3787046 None:intergenic 25.0%
! ACTGTAATTAGACCTAAATA+TGG + chr6.3:3782764-3782783 MS.gene20650:intron 25.0%
! AGGACTTAACAATCAATTAT+TGG - chr6.3:3782721-3782740 None:intergenic 25.0%
! AGTATAAGATGAATTCATGA+TGG - chr6.3:3785672-3785691 None:intergenic 25.0%
! ATAACAGGAAAACAAATAAG+TGG - chr6.3:3785532-3785551 None:intergenic 25.0%
! ATATTTAAACACAATTCGGA+TGG - chr6.3:3786846-3786865 None:intergenic 25.0%
! ATATTTAGGTCTAATTACAG+TGG - chr6.3:3782765-3782784 None:intergenic 25.0%
! CAGAAGAAAAAATTCATGTT+TGG - chr6.3:3786323-3786342 None:intergenic 25.0%
! CTATAACACCAACAAAAAAA+AGG - chr6.3:3783295-3783314 None:intergenic 25.0%
! GAAAAAATTCATGTTTGGAT+TGG - chr6.3:3786318-3786337 None:intergenic 25.0%
! GCATAAAATTAAGGGTTAAT+AGG - chr6.3:3784796-3784815 None:intergenic 25.0%
! GTCCCTATAAAAAAAAAACT+TGG + chr6.3:3783434-3783453 MS.gene20650:intron 25.0%
! GTTAGTTAGTTATAGTTACA+AGG + chr6.3:3783348-3783367 MS.gene20650:intron 25.0%
! GTTATCATTGCAATTAAGAA+TGG + chr6.3:3785547-3785566 MS.gene20650:intron 25.0%
! TATTTAAACACAATTCGGAT+GGG - chr6.3:3786845-3786864 None:intergenic 25.0%
! TGAGAAAATGACATAATTCA+AGG - chr6.3:3783192-3783211 None:intergenic 25.0%
! TTAAACAGTTCTGTTAGATT+TGG - chr6.3:3787325-3787344 None:intergenic 25.0%
! TTCTATCATACACCATATTT+AGG - chr6.3:3782779-3782798 None:intergenic 25.0%
! TTCTTAATTGCAATGATAAC+AGG - chr6.3:3785547-3785566 None:intergenic 25.0%
! TTTAATTAAGCTGAATGAGA+AGG + chr6.3:3785459-3785478 MS.gene20650:intron 25.0%
! TTTGAGAAAACATGTATGAT+TGG + chr6.3:3785944-3785963 MS.gene20650:intron 25.0%
!! ACTCATCTCTATTATTTCTT+CGG + chr6.3:3786574-3786593 MS.gene20650:CDS 25.0%
!! TGTTTCATAGCTTTCATTTT+AGG - chr6.3:3785865-3785884 None:intergenic 25.0%
!! TTAAATTTTCCCTTGATCTA+TGG - chr6.3:3785444-3785463 None:intergenic 25.0%
!!! AAATTTTGGCAAAATTTCAG+TGG - chr6.3:3782466-3782485 None:intergenic 25.0%
!!! ACAAGTTTTTTTTTTACAGG+GGG + chr6.3:3784648-3784667 MS.gene20650:intron 25.0%
!!! ACTTTTGAAAAGAAACTAGA+TGG + chr6.3:3787684-3787703 MS.gene20650:CDS 25.0%
!!! ATGATTTGTGTTTCATGTTT+TGG + chr6.3:3784821-3784840 MS.gene20650:intron 25.0%
!!! CATGTTGCTTATTTTTTTGT+GGG - chr6.3:3783862-3783881 None:intergenic 25.0%
!!! CTACAAGTTTTTTTTTACAG+GGG + chr6.3:3784730-3784749 MS.gene20650:intron 25.0%
!!! GTTATTTTCAGTTTGGTTTT+TGG - chr6.3:3787353-3787372 None:intergenic 25.0%
!!! TACAAGTTTTTTTTTACAGG+GGG + chr6.3:3784731-3784750 MS.gene20650:intron 25.0%
!!! TCATGTTGCTTATTTTTTTG+TGG - chr6.3:3783863-3783882 None:intergenic 25.0%
!!! TTTCATGTTTTGGAATTGTT+TGG + chr6.3:3784831-3784850 MS.gene20650:intron 25.0%
!!! TTTTTTTTCCAGGGAATTTT+CGG + chr6.3:3787064-3787083 MS.gene20650:intron 25.0%
AAAGAATAGAAGACAAGAAG+AGG + chr6.3:3783931-3783950 MS.gene20650:intron 30.0%
AAATATGCACTTGAAAACTG+TGG + chr6.3:3786897-3786916 MS.gene20650:intron 30.0%
AACACTAAAGTTAGTTCATC+TGG - chr6.3:3786461-3786480 None:intergenic 30.0%
AAGAATAGAAGACAAGAAGA+GGG + chr6.3:3783932-3783951 MS.gene20650:intron 30.0%
ACAGTTCAAATATATGACAG+TGG - chr6.3:3786995-3787014 None:intergenic 30.0%
ACCAAACTCTACAAAATTTC+AGG + chr6.3:3783069-3783088 MS.gene20650:intron 30.0%
AGGTCAATTTGACAAAATCA+TGG - chr6.3:3782522-3782541 None:intergenic 30.0%
AGTAGTAATGCTAAGGTAAT+TGG + chr6.3:3785593-3785612 MS.gene20650:CDS 30.0%
AGTTCCTTTATTCATTTCAC+AGG + chr6.3:3786415-3786434 MS.gene20650:intron 30.0%
ATCAGTTTAGATGGTTAACA+CGG + chr6.3:3786685-3786704 MS.gene20650:intron 30.0%
ATTTAAACACAATTCGGATG+GGG - chr6.3:3786844-3786863 None:intergenic 30.0%
CAATTGAAGAGATGAACAAA+TGG + chr6.3:3783889-3783908 MS.gene20650:intron 30.0%
CTTTATTAACCACTACTTTC+AGG + chr6.3:3786810-3786829 MS.gene20650:intron 30.0%
GAGTAAAAGTAGTAATGCTA+AGG + chr6.3:3785586-3785605 MS.gene20650:CDS 30.0%
GCTAGTATTTAGTGTATGTT+TGG + chr6.3:3786181-3786200 MS.gene20650:intron 30.0%
GTTAACACGGTTTAAATATG+TGG + chr6.3:3786698-3786717 MS.gene20650:intron 30.0%
GTTAATAAAGTTCAAATCCG+TGG - chr6.3:3786800-3786819 None:intergenic 30.0%
TGGTCTTTATGCTGTATTAT+GGG + chr6.3:3787569-3787588 MS.gene20650:CDS 30.0%
TGGTTTGAGAATTATATGTG+TGG - chr6.3:3783788-3783807 None:intergenic 30.0%
TGTACCTGTGAAATGAATAA+AGG - chr6.3:3786422-3786441 None:intergenic 30.0%
TTAACAGCAGGAACAAAAAA+AGG - chr6.3:3782741-3782760 None:intergenic 30.0%
TTAGTGTATGTTTGGATACA+CGG + chr6.3:3786189-3786208 MS.gene20650:intron 30.0%
TTCAAATATATGACAGTGGA+TGG - chr6.3:3786991-3787010 None:intergenic 30.0%
TTTATACTTCACACCAAACT+TGG + chr6.3:3785498-3785517 MS.gene20650:intron 30.0%
! AAGCACACTTTTGCATATAA+TGG - chr6.3:3782655-3782674 None:intergenic 30.0%
! AATCAAACAACCCATTTTCT+GGG - chr6.3:3784080-3784099 None:intergenic 30.0%
! ACACACAAACAACTCATTTT+CGG - chr6.3:3784168-3784187 None:intergenic 30.0%
! ACTTGTTAGTATGTGAAAAG+TGG + chr6.3:3785091-3785110 MS.gene20650:intron 30.0%
! CATATAATGGAGAAACTGAT+TGG - chr6.3:3782642-3782661 None:intergenic 30.0%
! CTGACAATTGACTATTTTCT+GGG + chr6.3:3785770-3785789 MS.gene20650:CDS 30.0%
! GGATTATGTATTGATCAATG+AGG + chr6.3:3783539-3783558 MS.gene20650:intron 30.0%
! GTTCAAATTTTGCTAAGCAA+CGG + chr6.3:3785209-3785228 MS.gene20650:intron 30.0%
! TCCTGAAATTTTGTAGAGTT+TGG - chr6.3:3783073-3783092 None:intergenic 30.0%
! TCTGCATTTTGCAGTATAAT+TGG + chr6.3:3787528-3787547 MS.gene20650:intron 30.0%
! TTATGTATTGATCAATGAGG+TGG + chr6.3:3783542-3783561 MS.gene20650:intron 30.0%
! TTGGTCTTTATGCTGTATTA+TGG + chr6.3:3787568-3787587 MS.gene20650:CDS 30.0%
! TTGGTTTGACAAAATCACAA+TGG + chr6.3:3786212-3786231 MS.gene20650:intron 30.0%
!! CTGAAGTATCTTTTGACAAT+TGG + chr6.3:3785990-3786009 MS.gene20650:intron 30.0%
!! TTTGTGTTGACTTTCTACAA+AGG + chr6.3:3785641-3785660 MS.gene20650:CDS 30.0%
!!! ACAAGGGTGTCATTAATTTT+AGG + chr6.3:3783365-3783384 MS.gene20650:intron 30.0%
!!! ACAAGTTTTTTTTTACAGGG+GGG + chr6.3:3784732-3784751 MS.gene20650:intron 30.0%
!!! ATATCCAATTTTTTCACACG+AGG + chr6.3:3782955-3782974 MS.gene20650:intron 30.0%
!!! CAAGGGTGTCATTAATTTTA+GGG + chr6.3:3783366-3783385 MS.gene20650:intron 30.0%
!!! CAAGTTTTTTTTTTACAGGG+GGG + chr6.3:3784649-3784668 MS.gene20650:intron 30.0%
!!! GTACAGTTTTTTAGAGAACT+CGG - chr6.3:3783033-3783052 None:intergenic 30.0%
!!! TACAGTTTTTTAGAGAACTC+GGG - chr6.3:3783032-3783051 None:intergenic 30.0%
!!! TTTTTTTCCAGGGAATTTTC+GGG + chr6.3:3787065-3787084 MS.gene20650:intron 30.0%
AAAAGAGAAGAGAAGAAGGT+TGG - chr6.3:3783729-3783748 None:intergenic 35.0%
AAAAGAGAGTTAAGTGCAAG+TGG - chr6.3:3786043-3786062 None:intergenic 35.0%
AAAATTGGATATCTCACTGC+CGG - chr6.3:3782947-3782966 None:intergenic 35.0%
AAAGAATCTTCAAATGGCGA+AGG - chr6.3:3783467-3783486 None:intergenic 35.0%
AAATGAGGAACAAAGAGAGA+AGG + chr6.3:3784210-3784229 MS.gene20650:intron 35.0%
AACACAAATGCTTAAGTGGA+TGG - chr6.3:3787023-3787042 None:intergenic 35.0%
AAGAACAAAGAGAAAGGAGA+TGG + chr6.3:3784256-3784275 MS.gene20650:intron 35.0%
AATGCAAGTGCTTGGAAAAT+AGG + chr6.3:3786539-3786558 MS.gene20650:CDS 35.0%
AATTGTTATCTCCGTTTGGT+TGG + chr6.3:3787168-3787187 MS.gene20650:CDS 35.0%
ACAGACTTGAGAAAGTCAAT+TGG - chr6.3:3785719-3785738 None:intergenic 35.0%
ACTGTTCATACCCAGAAAAT+GGG + chr6.3:3784067-3784086 MS.gene20650:intron 35.0%
AGAGAAAAGAGAAGAGAAGA+AGG - chr6.3:3783733-3783752 None:intergenic 35.0%
AGATGTGTATCTCAGATTCT+GGG + chr6.3:3784865-3784884 MS.gene20650:intron 35.0%
AGCTACAACTGTTGATATGA+TGG - chr6.3:3786504-3786523 None:intergenic 35.0%
ATGAACTGTCAGTCACATTT+CGG + chr6.3:3787430-3787449 MS.gene20650:intron 35.0%
ATTGTTATCTCCGTTTGGTT+GGG + chr6.3:3787169-3787188 MS.gene20650:CDS 35.0%
ATTGTTGGAGTCACCTATTT+AGG - chr6.3:3782992-3783011 None:intergenic 35.0%
CATTGAGTTTGACAAACTCA+CGG - chr6.3:3786295-3786314 None:intergenic 35.0%
CCATTGAAAACACTTAACCA+CGG + chr6.3:3786780-3786799 MS.gene20650:intron 35.0%
CTTCGGCAAAAACTAAACTT+TGG - chr6.3:3786259-3786278 None:intergenic 35.0%
GAATATAAAGCCCAACCAAA+CGG - chr6.3:3787182-3787201 None:intergenic 35.0%
GAGAATTATATGTGTGGATG+AGG - chr6.3:3783782-3783801 None:intergenic 35.0%
GGAGCCATAATAATCTCAAT+TGG + chr6.3:3787549-3787568 MS.gene20650:CDS 35.0%
GGTATGAACAGTACAATACA+GGG - chr6.3:3784059-3784078 None:intergenic 35.0%
GGTCTTTATGCTGTATTATG+GGG + chr6.3:3787570-3787589 MS.gene20650:CDS 35.0%
GTGATGAAGAACAAAGAGAA+AGG + chr6.3:3784250-3784269 MS.gene20650:intron 35.0%
GTTAGAAAAAACCTAAGTCC+TGG - chr6.3:3782917-3782936 None:intergenic 35.0%
TACAACTGTTGATATGATGG+TGG - chr6.3:3786501-3786520 None:intergenic 35.0%
TACTGTTCATACCCAGAAAA+TGG + chr6.3:3784066-3784085 MS.gene20650:intron 35.0%
TATACCAAAAGACACCCATA+TGG - chr6.3:3783413-3783432 None:intergenic 35.0%
TATCAATGTCAACGTGTCTA+TGG + chr6.3:3783219-3783238 MS.gene20650:intron 35.0%
TCAACCTCGTGTGAAAAAAT+TGG - chr6.3:3782962-3782981 None:intergenic 35.0%
TGAAAATAACCGAACTGTGA+TGG + chr6.3:3787363-3787382 MS.gene20650:intron 35.0%
TGCAAATTGTTATCTCCGTT+TGG + chr6.3:3787164-3787183 MS.gene20650:CDS 35.0%
TGGCAAAACTTCCATGTAAA+AGG - chr6.3:3782177-3782196 None:intergenic 35.0%
TGTGTCAAAGACCCTAATTA+CGG - chr6.3:3782872-3782891 None:intergenic 35.0%
TTCAAGGTAATCACAAGTGT+CGG - chr6.3:3783176-3783195 None:intergenic 35.0%
TTCGCCATTTGAAGATTCTT+TGG + chr6.3:3783466-3783485 MS.gene20650:intron 35.0%
TTCTTGTGAAAAGAGTGACA+GGG - chr6.3:3782331-3782350 None:intergenic 35.0%
TTGGAGCTTGAACAAAATCA+TGG - chr6.3:3786240-3786259 None:intergenic 35.0%
TTTCATAACCTTCTCATTGG+CGG + chr6.3:3786014-3786033 MS.gene20650:intron 35.0%
! AAGAAGATGGTCCTTTTACA+TGG + chr6.3:3782163-3782182 MS.gene20650:CDS 35.0%
! AAGAAGGTTGGTTATGGAAA+AGG - chr6.3:3783717-3783736 None:intergenic 35.0%
! AAGTCTTTTCCCACTAAGTA+GGG - chr6.3:3782833-3782852 None:intergenic 35.0%
! AATTGACTTTCTCAAGTCTG+TGG + chr6.3:3785718-3785737 MS.gene20650:CDS 35.0%
! AGAAGGTTGGTTATGGAAAA+GGG - chr6.3:3783716-3783735 None:intergenic 35.0%
! AGGCAATGAATGTATTGACA+TGG + chr6.3:3782211-3782230 MS.gene20650:CDS 35.0%
! ATAATGGAGAAACTGATTGG+AGG - chr6.3:3782639-3782658 None:intergenic 35.0%
! ATATGCAAAAGTGTGCTTCT+TGG + chr6.3:3782657-3782676 MS.gene20650:CDS 35.0%
! ATTGGACAAATTAGCTTAGG+TGG + chr6.3:3783511-3783530 MS.gene20650:intron 35.0%
! ATTTTCCAAGCACTTGCATT+AGG - chr6.3:3786539-3786558 None:intergenic 35.0%
! GAATCAAACAACCCATTTTC+TGG - chr6.3:3784081-3784100 None:intergenic 35.0%
! GCTGACAATTGACTATTTTC+TGG + chr6.3:3785769-3785788 MS.gene20650:CDS 35.0%
! GGAAGCATAATATCAATAGC+AGG + chr6.3:3785614-3785633 MS.gene20650:CDS 35.0%
! GGTTAAGTGTTTTCAATGGA+CGG - chr6.3:3786779-3786798 None:intergenic 35.0%
! GTGATTGGACAAATTAGCTT+AGG + chr6.3:3783508-3783527 MS.gene20650:intron 35.0%
! GTTTTGTAACTTACAGATCG+CGG + chr6.3:3785173-3785192 MS.gene20650:intron 35.0%
! TATGCAAAAGTGTGCTTCTT+GGG + chr6.3:3782658-3782677 MS.gene20650:CDS 35.0%
! TCTATGGACTGACATCATTA+TGG - chr6.3:3785428-3785447 None:intergenic 35.0%
! TGCACTATGGTACATTTTAC+AGG + chr6.3:3785793-3785812 MS.gene20650:CDS 35.0%
!! AAGTCAATTGGTTGATGAAG+TGG - chr6.3:3785707-3785726 None:intergenic 35.0%
!! AATTACAGTGGATTAACAGC+AGG - chr6.3:3782753-3782772 None:intergenic 35.0%
!! CAGTTCGGTTATTTTCAGTT+TGG - chr6.3:3787360-3787379 None:intergenic 35.0%
!! GGAATTTTCGGGAAGTTAAT+AGG + chr6.3:3787076-3787095 MS.gene20650:CDS 35.0%
!! TTTTTGTGGGTGTGTTTTAG+TGG - chr6.3:3783849-3783868 None:intergenic 35.0%
!!! CAAGTTTTTTTTTACAGGGG+GGG + chr6.3:3784733-3784752 MS.gene20650:intron 35.0%
!!! GGTTAAGGCCTTTTTTTTGT+TGG + chr6.3:3783284-3783303 MS.gene20650:intron 35.0%
!!! TTTTGTGGGTGTGTTTTAGT+GGG - chr6.3:3783848-3783867 None:intergenic 35.0%
AAGAACCTGAGTTCGATTGT+TGG - chr6.3:3783007-3783026 None:intergenic 40.0%
AAGAGAGAAGGACATGAAGA+TGG + chr6.3:3784222-3784241 MS.gene20650:intron 40.0%
AATAGAAGACAAGAAGAGGG+AGG + chr6.3:3783935-3783954 MS.gene20650:intron 40.0%
ACGGAGATAACAATTTGCAG+TGG - chr6.3:3787163-3787182 None:intergenic 40.0%
ACTATTGATGTCGACGTGTT+AGG - chr6.3:3785915-3785934 None:intergenic 40.0%
ACTCTTCATCTTGGAAGGTA+TGG + chr6.3:3787211-3787230 MS.gene20650:intron 40.0%
AGGCAATATAGTTTCTGCCT+GGG + chr6.3:3787096-3787115 MS.gene20650:CDS 40.0%
AGTACCAACAGCATAAGCAT+AGG - chr6.3:3782297-3782316 None:intergenic 40.0%
AGTGAAAGCAGGTAACAGAT+TGG - chr6.3:3784938-3784957 None:intergenic 40.0%
AGTGGACAATAGACCAAGTT+TGG - chr6.3:3785514-3785533 None:intergenic 40.0%
ATTGCCTATGCTTATGCTGT+TGG + chr6.3:3782290-3782309 MS.gene20650:CDS 40.0%
CAAAGCAACAGAAGAGATAG+AGG + chr6.3:3787593-3787612 MS.gene20650:CDS 40.0%
CACGTGAATGAGAGATGAAA+GGG + chr6.3:3784301-3784320 MS.gene20650:intron 40.0%
CAGATGTGTATCTCAGATTC+TGG + chr6.3:3784864-3784883 MS.gene20650:intron 40.0%
CCTGGGCAATACACTTAAAA+GGG + chr6.3:3787113-3787132 MS.gene20650:CDS 40.0%
CTAAGATATCTCCAGGACTT+AGG + chr6.3:3782903-3782922 MS.gene20650:intron 40.0%
CTATTGATGTCGACGTGTTA+GGG - chr6.3:3785914-3785933 None:intergenic 40.0%
CTGGGCAATACACTTAAAAG+GGG + chr6.3:3787114-3787133 MS.gene20650:CDS 40.0%
CTGGTAATCCACCGTAATTA+GGG + chr6.3:3782858-3782877 MS.gene20650:intron 40.0%
CTGTCTATGTAACCTCATTC+AGG + chr6.3:3787137-3787156 MS.gene20650:CDS 40.0%
CTTCTTGTGAAAAGAGTGAC+AGG - chr6.3:3782332-3782351 None:intergenic 40.0%
GAAGAGATAGAGGAAGATGT+TGG + chr6.3:3787603-3787622 MS.gene20650:CDS 40.0%
GAGATACACATCTGCATAAC+AGG - chr6.3:3784858-3784877 None:intergenic 40.0%
GATCAAACACCTGAAAGTAG+TGG - chr6.3:3786822-3786841 None:intergenic 40.0%
GATGTCAGTCCATAGATCAA+GGG + chr6.3:3785432-3785451 MS.gene20650:intron 40.0%
GATGTGTATCTCAGATTCTG+GGG + chr6.3:3784866-3784885 MS.gene20650:intron 40.0%
GGCTTTCATAACCTTCTCAT+TGG + chr6.3:3786011-3786030 MS.gene20650:intron 40.0%
GGGTATGAACAGTACAATAC+AGG - chr6.3:3784060-3784079 None:intergenic 40.0%
GTCTATGGCAGTGTTATATC+TGG + chr6.3:3783234-3783253 MS.gene20650:intron 40.0%
GTGTGGATGAGGTTTATTGT+TGG - chr6.3:3783771-3783790 None:intergenic 40.0%
GTTAACGTCGTTCGAAATTG+TGG + chr6.3:3786919-3786938 MS.gene20650:intron 40.0%
TAGGCAATATAGTTTCTGCC+TGG + chr6.3:3787095-3787114 MS.gene20650:CDS 40.0%
TAGGGTCTTTGACACACAAT+TGG + chr6.3:3782876-3782895 MS.gene20650:intron 40.0%
TCATTGCCTATAATCACAGC+AGG - chr6.3:3782200-3782219 None:intergenic 40.0%
TGATGTCAGTCCATAGATCA+AGG + chr6.3:3785431-3785450 MS.gene20650:intron 40.0%
TGTATGTTTGGATACACGGT+TGG + chr6.3:3786193-3786212 MS.gene20650:intron 40.0%
TGTCCATGCTTCATAGGTTA+AGG + chr6.3:3783269-3783288 MS.gene20650:intron 40.0%
TTAACTTCCCGAAAATTCCC+TGG - chr6.3:3787075-3787094 None:intergenic 40.0%
TTACAGATCGCGGAAAATAG+AGG + chr6.3:3785183-3785202 MS.gene20650:intron 40.0%
TTCAAAGCAGCTACACTTCA+AGG + chr6.3:3782248-3782267 MS.gene20650:CDS 40.0%
TTGTCCAATCACATGTCATC+AGG - chr6.3:3783500-3783519 None:intergenic 40.0%
! ACGCCTTCAATCAAAAGTGT+CGG - chr6.3:3783121-3783140 None:intergenic 40.0%
! ACTATTTTCTGGGTGCACTA+TGG + chr6.3:3785780-3785799 MS.gene20650:CDS 40.0%
! AGAGGTGCATTCTCTATAGA+TGG - chr6.3:3787642-3787661 None:intergenic 40.0%
! ATGCAAAAGTGTGCTTCTTG+GGG + chr6.3:3782659-3782678 MS.gene20650:CDS 40.0%
! CAAGTCTTTTCCCACTAAGT+AGG - chr6.3:3782834-3782853 None:intergenic 40.0%
! CAGCATCTGACTGTGTATTT+TGG - chr6.3:3784573-3784592 None:intergenic 40.0%
! CCGTGGTTAAGTGTTTTCAA+TGG - chr6.3:3786783-3786802 None:intergenic 40.0%
! CTGTCACTCTTTTCACAAGA+AGG + chr6.3:3782330-3782349 MS.gene20650:CDS 40.0%
! GAAGAGAAGAAGGTTGGTTA+TGG - chr6.3:3783723-3783742 None:intergenic 40.0%
! GCTCTATAGCTTTGCAAAAG+AGG - chr6.3:3787660-3787679 None:intergenic 40.0%
! GTGTTGTTGCTGGAAAAATG+AGG + chr6.3:3784195-3784214 MS.gene20650:intron 40.0%
! TGGTTGGGCTTTATATTCCT+TGG + chr6.3:3787184-3787203 MS.gene20650:CDS 40.0%
! TGTTGTTGTTGTGTTGTTGC+TGG + chr6.3:3784185-3784204 MS.gene20650:intron 40.0%
! TTAACTGAACCGAAGTGCTT+CGG + chr6.3:3787399-3787418 MS.gene20650:intron 40.0%
!! AATTGGTTGATGAAGTGGTG+AGG - chr6.3:3785702-3785721 None:intergenic 40.0%
!! AGAGGAAGATGTTGGTAGTT+TGG + chr6.3:3787611-3787630 MS.gene20650:CDS 40.0%
!! TGATATGATGGTGGCAGTTA+TGG - chr6.3:3786492-3786511 None:intergenic 40.0%
!!! ACTGTGTATTTTGGCTGATG+TGG - chr6.3:3784564-3784583 None:intergenic 40.0%
!!! GTTTTTTCTAACCCTCGAAC+CGG + chr6.3:3782925-3782944 MS.gene20650:intron 40.0%
AAAAGACACCCATATGGCAG+GGG - chr6.3:3783407-3783426 None:intergenic 45.0%
AAAGTGTGTGAGTGTGACTG+TGG - chr6.3:3785138-3785157 None:intergenic 45.0%
AATGAGGTGGCACTTTGACT+TGG + chr6.3:3783555-3783574 MS.gene20650:intron 45.0%
AATTTGCAGTGGCCTGAATG+AGG - chr6.3:3787152-3787171 None:intergenic 45.0%
AGAGAAAGGAGATGGAAGTG+AGG + chr6.3:3784264-3784283 MS.gene20650:intron 45.0%
AGAGAGATGAACGTTGTTGC+TGG + chr6.3:3783964-3783983 MS.gene20650:intron 45.0%
AGGCCTTAACCTATGAAGCA+TGG - chr6.3:3783275-3783294 None:intergenic 45.0%
AGGGAAGAAGAGAACAGAGA+AGG - chr6.3:3783697-3783716 None:intergenic 45.0%
AGTGGATGATTAATGCGTCG+TGG + chr6.3:3786954-3786973 MS.gene20650:intron 45.0%
CAAAAGACACCCATATGGCA+GGG - chr6.3:3783408-3783427 None:intergenic 45.0%
CAAGTCTGTGGATTCAAGCT+GGG + chr6.3:3785730-3785749 MS.gene20650:CDS 45.0%
CAGTTCCTAATGCAAGTGCT+TGG + chr6.3:3786531-3786550 MS.gene20650:CDS 45.0%
CCACGTGAATGAGAGATGAA+AGG + chr6.3:3784300-3784319 MS.gene20650:intron 45.0%
CCTTTCATCTCTCATTCACG+TGG - chr6.3:3784303-3784322 None:intergenic 45.0%
CGACGCATTAATCATCCACT+CGG - chr6.3:3786954-3786973 None:intergenic 45.0%
CTTGGCGATACTCTTCATCT+TGG + chr6.3:3787202-3787221 MS.gene20650:CDS 45.0%
GAAGAGAACAGAGAAGGGAA+AGG - chr6.3:3783691-3783710 None:intergenic 45.0%
GAAGGACATGAAGATGGTGA+TGG + chr6.3:3784228-3784247 MS.gene20650:intron 45.0%
GACACCTGATGACATGTGAT+TGG + chr6.3:3783493-3783512 MS.gene20650:intron 45.0%
GAGAAAGGAGATGGAAGTGA+GGG + chr6.3:3784265-3784284 MS.gene20650:intron 45.0%
GCAATTGCTGAAGCAAGTGT+TGG - chr6.3:3784916-3784935 None:intergenic 45.0%
GCCTGGGCAATACACTTAAA+AGG + chr6.3:3787112-3787131 MS.gene20650:CDS 45.0%
GCGATACTCTTCATCTTGGA+AGG + chr6.3:3787206-3787225 MS.gene20650:CDS 45.0%
GCTAGCATGAAAGTGAAAGC+AGG - chr6.3:3784949-3784968 None:intergenic 45.0%
GCTGGTAATCCACCGTAATT+AGG + chr6.3:3782857-3782876 MS.gene20650:intron 45.0%
GGGAAGAAGAGAACAGAGAA+GGG - chr6.3:3783696-3783715 None:intergenic 45.0%
GGTTGAACTGCCTCCTAAAT+AGG + chr6.3:3782976-3782995 MS.gene20650:intron 45.0%
GTCAAAGACCCTAATTACGG+TGG - chr6.3:3782869-3782888 None:intergenic 45.0%
GTGAGCTATCCATCACAGTT+CGG - chr6.3:3787375-3787394 None:intergenic 45.0%
GTGGGAAAAGACTTGAATGC+TGG + chr6.3:3782839-3782858 MS.gene20650:intron 45.0%
GTTGGAGTCACCTATTTAGG+AGG - chr6.3:3782989-3783008 None:intergenic 45.0%
TCAACCAAAAGTCCCCCAAA+TGG + chr6.3:3784756-3784775 MS.gene20650:intron 45.0%
TCAAGTCTGTGGATTCAAGC+TGG + chr6.3:3785729-3785748 MS.gene20650:CDS 45.0%
TGAACGTTGTTGCTGGAATC+AGG + chr6.3:3783971-3783990 MS.gene20650:intron 45.0%
TGACTCCAACAATCGAACTC+AGG + chr6.3:3782999-3783018 MS.gene20650:intron 45.0%
TGGCATGCTAAGATATCTCC+AGG + chr6.3:3782896-3782915 MS.gene20650:intron 45.0%
TGTCAGCAGAATACCAGCAA+TGG - chr6.3:3785756-3785775 None:intergenic 45.0%
TGTCTGTGTCCATGCTTCAT+AGG + chr6.3:3783263-3783282 MS.gene20650:intron 45.0%
TTGCCACCTGCTGTGATTAT+AGG + chr6.3:3782191-3782210 MS.gene20650:CDS 45.0%
TTGCCTATAATCACAGCAGG+TGG - chr6.3:3782197-3782216 None:intergenic 45.0%
TTGTGGTTAATTGTGCCGAG+TGG + chr6.3:3786936-3786955 MS.gene20650:intron 45.0%
! AAATTAGCTTAGGTGGCACG+CGG + chr6.3:3783518-3783537 MS.gene20650:intron 45.0%
! ACTTTTACCCCCTGCCATAT+GGG + chr6.3:3783396-3783415 MS.gene20650:intron 45.0%
! AGATGCTGACTATTGGCTGT+GGG + chr6.3:3784585-3784604 MS.gene20650:intron 45.0%
! CACAGTCAGATGCTGACTAT+TGG + chr6.3:3784578-3784597 MS.gene20650:intron 45.0%
! CTTTTCCCACTAAGTAGGGT+CGG - chr6.3:3782829-3782848 None:intergenic 45.0%
! TGAACTGAACCGAAGCACTT+CGG - chr6.3:3787411-3787430 None:intergenic 45.0%
!! CAAAAGTGTCGGTGCAACAT+AGG - chr6.3:3783110-3783129 None:intergenic 45.0%
!! CAAGATGAAGAGTATCGCCA+AGG - chr6.3:3787204-3787223 None:intergenic 45.0%
!! CCCTTTTAAGTGTATTGCCC+AGG - chr6.3:3787116-3787135 None:intergenic 45.0%
!! GCACCGACACTTTTGATTGA+AGG + chr6.3:3783115-3783134 MS.gene20650:intron 45.0%
!! GTAATCACAAGTGTCGGTGT+CGG - chr6.3:3783170-3783189 None:intergenic 45.0%
!! TCATGCTAGCTGTCACTTTC+AGG + chr6.3:3784959-3784978 MS.gene20650:CDS 45.0%
!! TTTTGATTGAAGGCGTGTCC+CGG + chr6.3:3783125-3783144 MS.gene20650:intron 45.0%
!!! TTAAATTAAGTTTTTAATTA+AGG - chr6.3:3783625-3783644 None:intergenic 5.0%
AAAAGTCCCCCAAATGGCAG+GGG + chr6.3:3784762-3784781 MS.gene20650:intron 50.0%
AAAGACACCCATATGGCAGG+GGG - chr6.3:3783406-3783425 None:intergenic 50.0%
ACACAACACATGTCGGACAC+CGG - chr6.3:3783147-3783166 None:intergenic 50.0%
ACGGTGTAACGCGATGACTT+CGG - chr6.3:3786276-3786295 None:intergenic 50.0%
AGTGGTAACCGCCAATGAGA+AGG - chr6.3:3786025-3786044 None:intergenic 50.0%
AGTGTGCTTCTTGGGGCAAT+AGG + chr6.3:3782666-3782685 MS.gene20650:CDS 50.0%
ATGTAGCCGACCCTACTTAG+TGG + chr6.3:3782820-3782839 MS.gene20650:intron 50.0%
CAAAAGTCCCCCAAATGGCA+GGG + chr6.3:3784761-3784780 MS.gene20650:intron 50.0%
CCAAAAGACACCCATATGGC+AGG - chr6.3:3783409-3783428 None:intergenic 50.0%
CGTTGTTGCTGGAATCAGGA+AGG + chr6.3:3783975-3783994 MS.gene20650:intron 50.0%
CTGTCAGTCACATTTCGGTG+CGG + chr6.3:3787435-3787454 MS.gene20650:intron 50.0%
GAATCAGGAAGGAGAGAGAG+AGG + chr6.3:3783986-3784005 MS.gene20650:intron 50.0%
GAGAACAGAGAAGGGAAAGG+TGG - chr6.3:3783688-3783707 None:intergenic 50.0%
GGGTCAACCAAATTGGCTGT+GGG + chr6.3:3784669-3784688 MS.gene20650:intron 50.0%
GGTCAACCAAATTGGCTGTG+GGG + chr6.3:3784670-3784689 MS.gene20650:intron 50.0%
GTGTCGGACACAACACATGT+CGG - chr6.3:3783154-3783173 None:intergenic 50.0%
GTGTGCTTCTTGGGGCAATA+GGG + chr6.3:3782667-3782686 MS.gene20650:CDS 50.0%
TACAGGGGGGTCAACCAAAT+TGG + chr6.3:3784662-3784681 MS.gene20650:intron 50.0%
TGTAGCCGACCCTACTTAGT+GGG + chr6.3:3782821-3782840 MS.gene20650:intron 50.0%
! CAGATGCTGACTATTGGCTG+TGG + chr6.3:3784584-3784603 MS.gene20650:intron 50.0%
! CCTGCCATATGGGTGTCTTT+TGG + chr6.3:3783406-3783425 MS.gene20650:intron 50.0%
! GACTTTTACCCCCTGCCATA+TGG + chr6.3:3783395-3783414 MS.gene20650:intron 50.0%
! GATGCTGACTATTGGCTGTG+GGG + chr6.3:3784586-3784605 MS.gene20650:intron 50.0%
!! ATATCTCACTGCCGGTTCGA+GGG - chr6.3:3782939-3782958 None:intergenic 50.0%
!! CTTTTACCCCCCTGCCATTT+GGG - chr6.3:3784773-3784792 None:intergenic 50.0%
!! TTTTACCCCCCTGCCATTTG+GGG - chr6.3:3784772-3784791 None:intergenic 50.0%
AAAGTCCCCCAAATGGCAGG+GGG + chr6.3:3784763-3784782 MS.gene20650:intron 55.0%
AGGAGATGGAAGTGAGGGAG+AGG + chr6.3:3784270-3784289 MS.gene20650:intron 55.0%
CAACCAAATTGGCTGTGGGG+CGG + chr6.3:3784673-3784692 MS.gene20650:intron 55.0%
CACAACACATGTCGGACACC+GGG - chr6.3:3783146-3783165 None:intergenic 55.0%
CCAAAAGTCCCCCAAATGGC+AGG + chr6.3:3784760-3784779 MS.gene20650:intron 55.0%
GATGGAAGTGAGGGAGAGGA+TGG + chr6.3:3784274-3784293 MS.gene20650:intron 55.0%
GATTCAAGCTGGGCCATTGC+TGG + chr6.3:3785740-3785759 MS.gene20650:CDS 55.0%
GGGGTCAACCAAATTGGCTG+TGG + chr6.3:3784668-3784687 MS.gene20650:intron 55.0%
GTGTGTGAGTGTGACTGTGG+TGG - chr6.3:3785135-3785154 None:intergenic 55.0%
TTACCGCCCCACAGCCAATT+TGG - chr6.3:3784679-3784698 None:intergenic 55.0%
! GCTTTTACCCCCCTGCCATT+TGG - chr6.3:3784774-3784793 None:intergenic 55.0%
! TTTACCCCCCTGCCATTTGG+GGG - chr6.3:3784771-3784790 None:intergenic 55.0%
!! CCTGCCATTTGGGGGACTTT+TGG - chr6.3:3784763-3784782 None:intergenic 55.0%
!! GATATCTCACTGCCGGTTCG+AGG - chr6.3:3782940-3782959 None:intergenic 55.0%
AAGTCCCCCAAATGGCAGGG+GGG + chr6.3:3784764-3784783 MS.gene20650:intron 60.0%
GGAAGTGAGGGAGAGGATGG+TGG + chr6.3:3784277-3784296 MS.gene20650:intron 60.0%
! GCTGACTATTGGCTGTGGGG+CGG + chr6.3:3784589-3784608 MS.gene20650:intron 60.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 3782158 3787716 3782158 ID=MS.gene20650
chr6.3 mRNA 3782158 3787716 3782158 ID=MS.gene20650.t1;Parent=MS.gene20650
chr6.3 exon 3782158 3782351 3782158 ID=MS.gene20650.t1.exon1;Parent=MS.gene20650.t1
chr6.3 CDS 3782158 3782351 3782158 ID=cds.MS.gene20650.t1;Parent=MS.gene20650.t1
chr6.3 exon 3782620 3782688 3782620 ID=MS.gene20650.t1.exon2;Parent=MS.gene20650.t1
chr6.3 CDS 3782620 3782688 3782620 ID=cds.MS.gene20650.t1;Parent=MS.gene20650.t1
chr6.3 exon 3784867 3784980 3784867 ID=MS.gene20650.t1.exon3;Parent=MS.gene20650.t1
chr6.3 CDS 3784867 3784980 3784867 ID=cds.MS.gene20650.t1;Parent=MS.gene20650.t1
chr6.3 exon 3785565 3785814 3785565 ID=MS.gene20650.t1.exon4;Parent=MS.gene20650.t1
chr6.3 CDS 3785565 3785814 3785565 ID=cds.MS.gene20650.t1;Parent=MS.gene20650.t1
chr6.3 exon 3786437 3786595 3786437 ID=MS.gene20650.t1.exon5;Parent=MS.gene20650.t1
chr6.3 CDS 3786437 3786595 3786437 ID=cds.MS.gene20650.t1;Parent=MS.gene20650.t1
chr6.3 exon 3787076 3787227 3787076 ID=MS.gene20650.t1.exon6;Parent=MS.gene20650.t1
chr6.3 CDS 3787076 3787227 3787076 ID=cds.MS.gene20650.t1;Parent=MS.gene20650.t1
chr6.3 exon 3787542 3787716 3787542 ID=MS.gene20650.t1.exon7;Parent=MS.gene20650.t1
chr6.3 CDS 3787542 3787716 3787542 ID=cds.MS.gene20650.t1;Parent=MS.gene20650.t1
Gene Sequence

>MS.gene20650

ATGACAAGAAGATGGTCCTTTTACATGGAAGTTTTGCCACCTGCTGTGATTATAGGCAATGAATGTATTGACATGGCTTTACTTACTTTGTTCAAAGCAGCTACACTTCAAGGAATGAACAATCATGTCTTTATTGCCTATGCTTATGCTGTTGGTACTTCTGTTCTTCTCCCTGTCACTCTTTTCACAAGAAGGTTCACAATTATTTATTTATTTCAATATCATAAACATATATGTTACATATGTATATATATAGTTTAGTACATGTTTGAATTGACTGTGAGTTTTTGCAGAATCATAGTGTTCCACTGAAATTTTGCCAAAATTTATATTTTGGAATTTGAATAGAATTATGGTGTTACCATGATTTTGTCAAATTGACCTTGATTTTAAACATATACTTAGGACTTATATTTCATTTGATTAATTTATTCATGTTTTTATTTTCATGTATTTTTGCAGATCAAGAGCTGTTGCTCCTCCAATCAGTTTCTCCATTATATGCAAAAGTGTGCTTCTTGGGGCAATAGGGTAAGTGCAAATTTGCCTTATACTTTACACCAATAATTGATTGTTAAGTCCTTTTTTTGTTCCTGCTGTTAATCCACTGTAATTAGACCTAAATATGGTGTATGATAGAACATTATGACGTAATTTGATTCATGTAGCCGACCCTACTTAGTGGGAAAAGACTTGAATGCTGGTAATCCACCGTAATTAGGGTCTTTGACACACAATTGGCATGCTAAGATATCTCCAGGACTTAGGTTTTTTCTAACCCTCGAACCGGCAGTGAGATATCCAATTTTTTCACACGAGGTTGAACTGCCTCCTAAATAGGTGACTCCAACAATCGAACTCAGGTTCTTTTCCCGAGTTCTCTAAAAAACTGTACTTTTTTCTGAGATGTTACCAAACTCTACAAAATTTCAGGATGATTTTGTTAAAGCCTATGTTGCACCGACACTTTTGATTGAAGGCGTGTCCCGGTGTCCGACATGTGTTGTGTCCGACACCGACACTTGTGATTACCTTGAATTATGTCATTTTCTCAAGAATGTTATCAATGTCAACGTGTCTATGGCAGTGTTATATCTGGTGTCTGTGTCTGTGTCCATGCTTCATAGGTTAAGGCCTTTTTTTTGTTGGTGTTATAGTAACTTTGTTATATCTAGTCTTGATGTTAGTTAGTTAGTTAGTTATAGTTACAAGGGTGTCATTAATTTTAGGGTTAAATGACTTTTACCCCCTGCCATATGGGTGTCTTTTGGTATACGTCCCTATAAAAAAAAAACTTGGAGATTCTCCTTCGCCATTTGAAGATTCTTTGGTTTTGACACCTGATGACATGTGATTGGACAAATTAGCTTAGGTGGCACGCGGATTATGTATTGATCAATGAGGTGGCACTTTGACTTGGCTTTTTTTATTTCTTTTCCAATTTTTTTAATTCAATGTAAATTTCCTTAATTAAAAACTTAATTTAATGAATTAAAAACATTAAAAGAATTATTTTTCTCTTCTTCTCCACCTTTCCCTTCTCTGTTCTCTTCTTCCCTTTTCCATAACCAACCTTCTTCTCTTCTCTTTTCTCTTTAATTCAACAAAAACCAACAATAAACCTCATCCACACATATAATTCTCAAACCAAAAAACACACTAATTTATCATTTTTATCAAAATAAAACCCACTAAAACACACCCACAAAAAAATAAGCAACATGATGTTTTCAATTGAAGAGATGAACAAATGGATTAGAGAAGAAAGAAGAGAAAGAATAGAAGACAAGAAGAGGGAGGAAGAGAAGAGAGATGAACGTTGTTGCTGGAATCAGGAAGGAGAGAGAGAGGAGTTTTAAGTTCTAACACTTCTCTTTTCTTCATCATTCTCTTCTCTTCCCTGTATTGTACTGTTCATACCCAGAAAATGGGTTGTTTGATTCCAAATTCTAACCTAAATTTGTTGTTTGATTTGATTCCATTTGTATTGTTTATGATTGATTCGATCCGAAAATGAGTTGTTTGTGTGTTGTTGTTGTGTTGTTGCTGGAAAAATGAGGAACAAAGAGAGAAGGACATGAAGATGGTGATGGTGATGAAGAACAAAGAGAAAGGAGATGGAAGTGAGGGAGAGGATGGTGGCCACGTGAATGAGAGATGAAAGGGAATTAATTGAGTTTTTTTTAATTTGTTTTTGTTTTAATTTTTGTTTTGTTTTAGTTTTAGTTTTTTTAATTGGTTTTTGTTTTAATTTTAATTTTATTTTGTTTTTGTTTTATTTTATTTTATTTTAATTGGTTAATGTTATTTTAATTTTAATTTTATTTTTGTTTTATTTTATTTAATTTTTATCCAAGTGGATATTAAAAAAAAAAAACTAAAATTATTTATACAGTCAGCACGCCACATCAGCCAAAATACACAGTCAGATGCTGACTATTGGCTGTGGGGCGGTAAACCAAGAAATCTTTATATTACAAGTAGGAATCTACAAGTTTTTTTTTTACAGGGGGGTCAACCAAATTGGCTGTGGGGCGGTAAACCAAGAAATCTTTATATTACAAGTAGGAATCTACAAGTTTTTTTTTACAGGGGGGGTCAACCAAAAGTCCCCCAAATGGCAGGGGGGTAAAAGCCTATTAACCCTTAATTTTATGCTTATGATGATTTGTGTTTCATGTTTTGGAATTGTTTGGACCTGTTATGCAGATGTGTATCTCAGATTCTGGGGTATATTAGTATTAATTCAAGTTCTCCAACACTTGCTTCAGCAATTGCCAATCTGTTACCTGCTTTCACTTTCATGCTAGCTGTCACTTTCAGGTTTGCTAATTATATTTTAATCTGGCAGATTCTTATATCCTTTGAAACTAAATTTTGCATTACTTGTCTTGCACTCAATGAAATGTCTTAGAAACAACAATAGACTTGATACTTGTTAGTATGTGAAAAGTGGACATGACTCATACAAACTCCACCACAGTCACACTCACACACTTTAACACATGAGTAACAGTTTTGTAACTTACAGATCGCGGAAAATAGAGGTTTGTTCAAATTTTGCTAAGCAACGGTGCTATAGCGTCACTATAGTCACCATTTGACAATAATTTGTACTAAATACTATATCGCAGAACAATAGCGATTTGTTCAAATTTCGTTACGCTCAATTGCCGCTATATATATAGCTGTTATTTGACACTTGAGTTTTGTCTAAATGATAGCTTAAATCCCTAACAGAAGATATTTAAAATTTGAACTAATGCACCATAATGATGTCAGTCCATAGATCAAGGGAAAATTTAATTAAGCTGAATGAGAAGGAAAGTTTTAAACTGCATTTATACTTCACACCAAACTTGGTCTATTGTCCACTTATTTGTTTTCCTGTTATCATTGCAATTAAGAATGGAAAAGTTAGCTGCAAAGAGTAAAAGTAGTAATGCTAAGGTAATTGGAAGCATAATATCAATAGCAGGTGCTTTTGTGTTGACTTTCTACAAAGGACAATCCATCATGAATTCATCTTATACTAATCATTCCTCACCACTTCATCAACCAATTGACTTTCTCAAGTCTGTGGATTCAAGCTGGGCCATTGCTGGTATTCTGCTGACAATTGACTATTTTCTGGGTGCACTATGGTACATTTTACAGGTATGATTAGTATTATGCATAATAATTGATATTATTATACTTTAAAACCTAAAATGAAAGCTATGAAACACTGACACACGCGAGACACAACACTGACCCTAACACGTCGACATCAATAGTCAATAATAATTTGAGAAAACATGTATGATTGGATGCAACGATGCACGTCTTCAATCTGAAGTATCTTTTGACAATTGGCTTTCATAACCTTCTCATTGGCGGTTACCACTTGCACTTAACTCTCTTTTCTATAATATTAGCAACAGTTCTCTCTTTCATTCGTTTCAACAAACACTACACATGAATTTCACTCAATAACAGATATTGTGTCGTAAAGAGTGTATTATGAGAAACAGAAAAAGTGTTGCTAGTATTTAGTGTATGTTTGGATACACGGTTGGTTTGACAAAATCACAATGGCACCATGATTTTGTTCAAGCTCCAAAGTTTAGTTTTTGCCGAAGTCATCGCGTTACACCGTGAGTTTGTCAAACTCAATGCCAATCCAAACATGAATTTTTTCTTCTGTAAATATTCTATTTGTTTCTTCATTTCTTGTTATTTAATGAGATCATCAAAATTTTTGTACTGAAAAGTTTCAGTTCCTTTATTCATTTCACAGGTACATATCTTGAAAGAGTTCCCAGATGAACTAACTTTAGTGTTGTTATACTCCATAACTGCCACCATCATATCAACAGTTGTAGCTTTGTTATCAGTTCCTAATGCAAGTGCTTGGAAAATAGGACTAAATCTCTCACTCATCTCTATTATTTCTTCGGTAAGATACACTGCAAAACTACTGCTACACTTCGACAAAAAAATTTAAATTGTGTTATTTTGACTGCAAATTTGACATCAAAATTCAACATCAGTTTAGATGGTTAACACGGTTTAAATATGTGGTTAGTTATATTCAGCAAATGATTAATGAATTTAACAAGGTGTCGCAAATCATTAACCGTCCATTGAAAACACTTAACCACGGATTTGAACTTTATTAACCACTACTTTCAGGTGTTTGATCCCCATCCGAATTGTGTTTAAATATAGATGATACTCATTAATCACGATTTCAGTTCAAATATGCACTTGAAAACTGTGGTTAACGTCGTTCGAAATTGTGGTTAATTGTGCCGAGTGGATGATTAATGCGTCGTGGCACATGTTATACCATCCACTGTCATATATTTGAACTGTGTTAACCATCCACTTAAGCATTTGTGTTTATTGATGACACTTTTTTTTTTTTTTTTTCCAGGGAATTTTCGGGAAGTTAATAGGCAATATAGTTTCTGCCTGGGCAATACACTTAAAAGGGGCTGTCTATGTAACCTCATTCAGGCCACTGCAAATTGTTATCTCCGTTTGGTTGGGCTTTATATTCCTTGGCGATACTCTTCATCTTGGAAGGTATGGTTAATTCAATTTTTCTTTGATTCTTTGTGAATCGAACTATACTAAATTGCTATTGTTAACTGATAATTATGACTTAAAAAAAAGCGAACCAAATCTAACAGAACTGTTTAAATAGACCAAAAACCAAACTGAAAATAACCGAACTGTGATGGATAGCTCACGAACTTAACTGAACCGAAGTGCTTCGGTTCAGTTCATGAACTGTCAGTCACATTTCGGTGCGGTATTGCTTTGTTATAAACTGACTAAATGAAGAGAATATAAGTGAAGTGTCCATTTATGTATATTTTTGTTTCTGCATTTTGCAGTATAATTGGAGCCATAATAATCTCAATTGGTCTTTATGCTGTATTATGGGGCAAAGCAACAGAAGAGATAGAGGAAGATGTTGGTAGTTTGGAGTCACCATCTATAGAGAATGCACCTCTTTTGCAAAGCTATAGAGCAGAAACTTTTGAAAAGAAACTAGATGGAAATGTTTAA
Protein sequence

>MS.gene20650.t1

MTRRWSFYMEVLPPAVIIGNECIDMALLTLFKAATLQGMNNHVFIAYAYAVGTSVLLPVTLFTRRSRAVAPPISFSIICKSVLLGAIGCVSQILGYISINSSSPTLASAIANLLPAFTFMLAVTFRMEKLAAKSKSSNAKVIGSIISIAGAFVLTFYKGQSIMNSSYTNHSSPLHQPIDFLKSVDSSWAIAGILLTIDYFLGALWYILQVHILKEFPDELTLVLLYSITATIISTVVALLSVPNASAWKIGLNLSLISIISSGIFGKLIGNIVSAWAIHLKGAVYVTSFRPLQIVISVWLGFIFLGDTLHLGSIIGAIIISIGLYAVLWGKATEEIEEDVGSLESPSIENAPLLQSYRAETFEKKLDGNV