Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21538.t1 | ALM55021.1 | 86.5 | 193 | 0 | 1 | 1 | 167 | 196 | 388 | 1.80E-81 | 312 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21538.t1 | Q8W5B1 | 69.0 | 129 | 39 | 1 | 40 | 167 | 233 | 361 | 6.1e-46 | 185.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21538.t1 | A0A141GTN5 | 86.5 | 193 | 0 | 1 | 1 | 167 | 196 | 388 | 1.3e-81 | 312.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056466 | MS.gene21538 | 0.806349 | 8.59E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 42 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCATCCCGAACTTTATTT+TGG | 0.206594 | 5.3:-6414512 | MS.gene21538:CDS |
| TATATTGATTTGCTACATTC+AGG | 0.264863 | 5.3:+6418065 | None:intergenic |
| TGACATATTCTCCCCTTTGC+TGG | 0.299644 | 5.3:+6418245 | None:intergenic |
| CAGACCGTTCAGACTCAAAA+AGG | 0.365583 | 5.3:-6417998 | MS.gene21538:intron |
| AGATTACCCTTCTATCTTCC+AGG | 0.369139 | 5.3:+6415365 | None:intergenic |
| TTCAGGGTCCTCAGAAGATT+GGG | 0.379052 | 5.3:+6418082 | None:intergenic |
| AAAAGCAGCTCATGCATCTC+TGG | 0.388906 | 5.3:-6414763 | MS.gene21538:CDS |
| TTTAACTTCTTTGCTTTAGT+AGG | 0.389750 | 5.3:+6418023 | None:intergenic |
| ATGAGTACCAAAATAAAGTT+CGG | 0.391721 | 5.3:+6414505 | None:intergenic |
| CTTTCACTCACACAGAGTTC+AGG | 0.399813 | 5.3:-6415966 | MS.gene21538:intron |
| TTGCTAACCTGGAAGATAGA+AGG | 0.399917 | 5.3:-6415372 | MS.gene21538:CDS |
| TATTCTCCCCTTTGCTGGAC+AGG | 0.412431 | 5.3:+6418250 | None:intergenic |
| ATTCAGGGTCCTCAGAAGAT+TGG | 0.434866 | 5.3:+6418081 | None:intergenic |
| TGAGTACCAAAATAAAGTTC+GGG | 0.440705 | 5.3:+6414506 | None:intergenic |
| AGAAATTAGAGAACTATTAG+TGG | 0.442088 | 5.3:+6414468 | None:intergenic |
| GAGAAGAATTTGCAGAATGA+GGG | 0.451580 | 5.3:-6418207 | MS.gene21538:CDS |
| TGAGAAGAATTTGCAGAATG+AGG | 0.452340 | 5.3:-6418208 | MS.gene21538:CDS |
| GAAAGAACTGCCTCTTCTGC+AGG | 0.458363 | 5.3:+6415984 | None:intergenic |
| TTTGCTTTAGTAGGCAGAGC+AGG | 0.471731 | 5.3:+6418032 | None:intergenic |
| ATATTGATTTGCTACATTCA+GGG | 0.478951 | 5.3:+6418066 | None:intergenic |
| TAGATATCCTGTCCAGCAAA+GGG | 0.491609 | 5.3:-6418257 | MS.gene21538:CDS |
| AACACTTGTTCCAGTGCCAT+GGG | 0.492904 | 5.3:+6415433 | None:intergenic |
| GGCTGATGGTCATGTTCCGT+GGG | 0.496542 | 5.3:-6414574 | MS.gene21538:CDS |
| TAACACTTGTTCCAGTGCCA+TGG | 0.516004 | 5.3:+6415432 | None:intergenic |
| TGATGATGGAGTTGCTAACC+TGG | 0.518682 | 5.3:-6415383 | MS.gene21538:CDS |
| TGGCTGATGGTCATGTTCCG+TGG | 0.518749 | 5.3:-6414575 | MS.gene21538:CDS |
| GTCGTATGCTCCTGCAGAAG+AGG | 0.539504 | 5.3:-6415994 | MS.gene21538:CDS |
| GTTAATGAAGCCCATGGCAC+TGG | 0.540871 | 5.3:-6415443 | MS.gene21538:intron |
| TGCTAACCTGGAAGATAGAA+GGG | 0.563120 | 5.3:-6415371 | MS.gene21538:intron |
| AGTGAAGATGAAGTTGATGA+TGG | 0.571990 | 5.3:-6415397 | MS.gene21538:CDS |
| GTAGATATCCTGTCCAGCAA+AGG | 0.581784 | 5.3:-6418258 | None:intergenic |
| AATTTGCAGAATGAGGGAAA+TGG | 0.583836 | 5.3:-6418201 | MS.gene21538:intron |
| GAGAACTATTAGTGGGCGAA+AGG | 0.590076 | 5.3:+6414476 | None:intergenic |
| TGTGGTAGGGTACTGGCTGA+TGG | 0.593400 | 5.3:-6414588 | MS.gene21538:intron |
| GAAATTAGAGAACTATTAGT+GGG | 0.597602 | 5.3:+6414469 | None:intergenic |
| TCATGTTCCGTGGGCTTGTG+AGG | 0.609215 | 5.3:-6414565 | MS.gene21538:CDS |
| CAACTTCATCTTCACTATCA+CGG | 0.618030 | 5.3:+6415404 | None:intergenic |
| TGCCATGCCCCAATCTTCTG+AGG | 0.626073 | 5.3:-6418090 | MS.gene21538:CDS |
| GTCCTCAGAAGATTGGGGCA+TGG | 0.626934 | 5.3:+6418088 | None:intergenic |
| GAAAATGCCTCACAAGCCCA+CGG | 0.656006 | 5.3:+6414558 | None:intergenic |
| TCAGGGTCCTCAGAAGATTG+GGG | 0.658194 | 5.3:+6418083 | None:intergenic |
| AGATATCCTGTCCAGCAAAG+GGG | 0.705599 | 5.3:-6418256 | MS.gene21538:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATAAAATAAAAT+TGG | + | chr5.3:6416337-6416356 | None:intergenic | 0.0% |
| !! | ATAAATAAAATAATTTACAG+GGG | + | chr5.3:6416252-6416271 | None:intergenic | 10.0% |
| !! | ATCAAAACAAAAAAATTTAT+AGG | + | chr5.3:6416287-6416306 | None:intergenic | 10.0% |
| !! | CAAAAATAAAATATTGAATA+TGG | + | chr5.3:6418030-6418049 | None:intergenic | 10.0% |
| !! | TCAAAACAAAAAAATTTATA+GGG | + | chr5.3:6416286-6416305 | None:intergenic | 10.0% |
| !! | AAAACAAAAAAATTTATAGG+GGG | + | chr5.3:6416284-6416303 | None:intergenic | 15.0% |
| !! | AATATAAGATAGAAAAAACA+AGG | + | chr5.3:6414777-6414796 | None:intergenic | 15.0% |
| !! | AGGATTAATTAGATAATATA+TGG | - | chr5.3:6417193-6417212 | MS.gene21538:intron | 15.0% |
| !! | ATGTGTATATCATATAAAAT+AGG | - | chr5.3:6416179-6416198 | MS.gene21538:intron | 15.0% |
| !! | CAAAACAAAAAAATTTATAG+GGG | + | chr5.3:6416285-6416304 | None:intergenic | 15.0% |
| !! | CAAACATAATATAAATGAAA+CGG | + | chr5.3:6416014-6416033 | None:intergenic | 15.0% |
| !! | CTAAAATAAATAAAATCTGA+CGG | + | chr5.3:6415698-6415717 | None:intergenic | 15.0% |
| !! | TAAATAAAATAATTTACAGG+GGG | + | chr5.3:6416251-6416270 | None:intergenic | 15.0% |
| !! | TCATTTATATTATGTTTGAA+TGG | - | chr5.3:6416016-6416035 | MS.gene21538:intron | 15.0% |
| !! | TGTGTATATCATATAAAATA+GGG | - | chr5.3:6416180-6416199 | MS.gene21538:intron | 15.0% |
| !! | TTTAGTATTAAATCCATTTA+TGG | + | chr5.3:6416961-6416980 | None:intergenic | 15.0% |
| !!! | AAATAAAATTGGTTTTTGTT+TGG | + | chr5.3:6416326-6416345 | None:intergenic | 15.0% |
| !!! | AAATCAATTTTTTTTTGTAC+AGG | - | chr5.3:6416427-6416446 | MS.gene21538:intron | 15.0% |
| !!! | AATAAAATTTCTAAAGCTAA+TGG | + | chr5.3:6417100-6417119 | None:intergenic | 15.0% |
| !!! | AATCAATTTTTTTTTGTACA+GGG | - | chr5.3:6416428-6416447 | MS.gene21538:intron | 15.0% |
| !!! | ATCAAAACAATTTTTTTTAC+AGG | - | chr5.3:6416398-6416417 | MS.gene21538:intron | 15.0% |
| !!! | CAACTTTGTATTATTTTATA+GGG | + | chr5.3:6416470-6416489 | None:intergenic | 15.0% |
| !!! | TATTATTTTATAGGGTTAAT+AGG | + | chr5.3:6416462-6416481 | None:intergenic | 15.0% |
| !!! | TCAAAACAATTTTTTTTACA+GGG | - | chr5.3:6416399-6416418 | MS.gene21538:intron | 15.0% |
| !!! | TCAACTTTGTATTATTTTAT+AGG | + | chr5.3:6416471-6416490 | None:intergenic | 15.0% |
| !! | AAACATTAGAAAAGATTTAG+AGG | + | chr5.3:6414969-6414988 | None:intergenic | 20.0% |
| !! | AAATAAAATAATTTACAGGG+GGG | + | chr5.3:6416250-6416269 | None:intergenic | 20.0% |
| !! | AACAAAAGAAAGGAAAAAAA+AGG | - | chr5.3:6415967-6415986 | MS.gene21538:CDS | 20.0% |
| !! | AATTTCTATAAGTGAATTAC+AGG | - | chr5.3:6416873-6416892 | MS.gene21538:intron | 20.0% |
| !! | AGAAAGAAGAAGAAAAAAAA+AGG | + | chr5.3:6416662-6416681 | None:intergenic | 20.0% |
| !! | ATAAGAAAGTAACAAAAGAA+AGG | - | chr5.3:6415957-6415976 | MS.gene21538:intron | 20.0% |
| !! | ATAATGGTAATTACAAAATG+AGG | + | chr5.3:6417038-6417057 | None:intergenic | 20.0% |
| !! | GTCTAGTATTAAAAACATAA+TGG | + | chr5.3:6417054-6417073 | None:intergenic | 20.0% |
| !! | TCATATAAAATAGGGTTAAT+AGG | - | chr5.3:6416188-6416207 | MS.gene21538:intron | 20.0% |
| !!! | AAAACAATTTTTTTTACAGG+GGG | - | chr5.3:6416401-6416420 | MS.gene21538:intron | 20.0% |
| !!! | AAGAAATTTTCGTTTTTGTT+TGG | - | chr5.3:6416358-6416377 | MS.gene21538:intron | 20.0% |
| !!! | ATCAATTTTTTTTTGTACAG+GGG | - | chr5.3:6416429-6416448 | MS.gene21538:intron | 20.0% |
| !!! | CAAAACAATTTTTTTTACAG+GGG | - | chr5.3:6416400-6416419 | MS.gene21538:intron | 20.0% |
| !!! | TAACATGTTTTTAAACACTA+TGG | + | chr5.3:6417547-6417566 | None:intergenic | 20.0% |
| !!! | TCTTGTTTTTTTTTTAACTG+TGG | - | chr5.3:6418121-6418140 | MS.gene21538:intron | 20.0% |
| !!! | TTTTTTTTTTAACTGTGGTA+GGG | - | chr5.3:6418126-6418145 | MS.gene21538:intron | 20.0% |
| ! | AACAACCTTGAATAATAGAT+AGG | - | chr5.3:6417576-6417595 | MS.gene21538:intron | 25.0% |
| ! | AAGAATTACTAGAACAGAAA+AGG | + | chr5.3:6417833-6417852 | None:intergenic | 25.0% |
| ! | ACCATTATGGATTTAATACT+AGG | - | chr5.3:6417004-6417023 | MS.gene21538:intron | 25.0% |
| ! | AGAAGAAGAAAAAAAAAGGA+TGG | + | chr5.3:6416658-6416677 | None:intergenic | 25.0% |
| ! | ATAATGGTAATTAGAAAACG+AGG | + | chr5.3:6416992-6417011 | None:intergenic | 25.0% |
| ! | ATCAACAATAATCAAACACA+TGG | + | chr5.3:6418100-6418119 | None:intergenic | 25.0% |
| ! | ATGAGTACCAAAATAAAGTT+CGG | + | chr5.3:6418225-6418244 | None:intergenic | 25.0% |
| ! | CAATACCTATCTATTATTCA+AGG | + | chr5.3:6417584-6417603 | None:intergenic | 25.0% |
| ! | CATAATATAAATGAAACGGA+TGG | + | chr5.3:6416010-6416029 | None:intergenic | 25.0% |
| ! | CTAATGGTAATTACAAAATG+AGG | + | chr5.3:6417084-6417103 | None:intergenic | 25.0% |
| ! | CTGTGATTACAGAATTTAAA+AGG | + | chr5.3:6416600-6416619 | None:intergenic | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | - | chr5.3:6414929-6414948 | MS.gene21538:intron | 25.0% |
| ! | TAGACAATATGCAAATTGTA+TGG | + | chr5.3:6417226-6417245 | None:intergenic | 25.0% |
| ! | TAGGTGAATAAAAAATCAGA+AGG | + | chr5.3:6416805-6416824 | None:intergenic | 25.0% |
| !! | CTTTTCTAATGTTTCTCTAA+TGG | - | chr5.3:6414975-6414994 | MS.gene21538:intron | 25.0% |
| !! | TCGTTTTCTAATTACCATTA+TGG | - | chr5.3:6416991-6417010 | MS.gene21538:intron | 25.0% |
| !! | TGGTTTTTGATAGAACATTA+TGG | + | chr5.3:6414925-6414944 | None:intergenic | 25.0% |
| !! | TTTAACTTCTTTGCTTTAGT+AGG | + | chr5.3:6414707-6414726 | None:intergenic | 25.0% |
| !!! | AAACAATTTTTTTTACAGGG+GGG | - | chr5.3:6416402-6416421 | MS.gene21538:intron | 25.0% |
| !!! | AGATTTTAGATTGTTACTTC+TGG | - | chr5.3:6417442-6417461 | MS.gene21538:intron | 25.0% |
| !!! | ATATTGATTTGCTACATTCA+GGG | + | chr5.3:6414664-6414683 | None:intergenic | 25.0% |
| !!! | GATTTTAGATTGTTACTTCT+GGG | - | chr5.3:6417443-6417462 | MS.gene21538:intron | 25.0% |
| !!! | GTTTTTTTTTTAACTGTGGT+AGG | - | chr5.3:6418125-6418144 | MS.gene21538:intron | 25.0% |
| !!! | TAAAAGGGTGCTTATATATA+AGG | + | chr5.3:6415793-6415812 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr5.3:6415107-6415126 | None:intergenic | 25.0% |
| !!! | TATATTGATTTGCTACATTC+AGG | + | chr5.3:6414665-6414684 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTTTTGTACAGG+GGG | - | chr5.3:6416430-6416449 | MS.gene21538:intron | 25.0% |
| AAGAAACTTCAATCACAACA+TGG | + | chr5.3:6416538-6416557 | None:intergenic | 30.0% | |
| AGAAAAGGATCAAAATGAAC+GGG | + | chr5.3:6417818-6417837 | None:intergenic | 30.0% | |
| CAGAAAAGGATCAAAATGAA+CGG | + | chr5.3:6417819-6417838 | None:intergenic | 30.0% | |
| CAGATAACTGTTGAACAAAA+AGG | + | chr5.3:6416932-6416951 | None:intergenic | 30.0% | |
| GCCTAGTATTAAATCCATAA+TGG | + | chr5.3:6417008-6417027 | None:intergenic | 30.0% | |
| TACATCATCGTATTTAAGCT+GGG | + | chr5.3:6415383-6415402 | None:intergenic | 30.0% | |
| TAGAATGAACATGAACATGT+GGG | - | chr5.3:6417475-6417494 | MS.gene21538:intron | 30.0% | |
| TGAGTACCAAAATAAAGTTC+GGG | + | chr5.3:6418224-6418243 | None:intergenic | 30.0% | |
| TGCTTATATATAGAGACAGA+GGG | - | chr5.3:6415827-6415846 | MS.gene21538:intron | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | + | chr5.3:6415040-6415059 | None:intergenic | 30.0% | |
| TTATCTCTAACAAACAAGAG+TGG | - | chr5.3:6417125-6417144 | MS.gene21538:intron | 30.0% | |
| TTGACATAAATGAGCATATC+AGG | + | chr5.3:6416702-6416721 | None:intergenic | 30.0% | |
| TTGATCTACTCTTCTTACAA+CGG | - | chr5.3:6415041-6415060 | MS.gene21538:intron | 30.0% | |
| ! | AATATTAACTGAAGTGCTAC+TGG | - | chr5.3:6417157-6417176 | MS.gene21538:intron | 30.0% |
| ! | ACTCTTTTATGAGGAAACAA+AGG | - | chr5.3:6417988-6418007 | MS.gene21538:intron | 30.0% |
| ! | ATTTACTTGTTAGTCATCCA+GGG | + | chr5.3:6415939-6415958 | None:intergenic | 30.0% |
| ! | CTTTTTGTTCAACAGTTATC+TGG | - | chr5.3:6416930-6416949 | MS.gene21538:intron | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr5.3:6414985-6415004 | MS.gene21538:intron | 30.0% |
| ! | TATAAGCACCCTTTTATTAG+AGG | - | chr5.3:6415797-6415816 | MS.gene21538:intron | 30.0% |
| ! | TATTTACTTGTTAGTCATCC+AGG | + | chr5.3:6415940-6415959 | None:intergenic | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr5.3:6415111-6415130 | MS.gene21538:intron | 30.0% |
| !! | ATTCATCCCGAACTTTATTT+TGG | - | chr5.3:6418215-6418234 | MS.gene21538:CDS | 30.0% |
| !! | TATTTTTGTTCTTTTCCCCA+CGG | - | chr5.3:6418042-6418061 | MS.gene21538:CDS | 30.0% |
| !! | TCTAGCTTTAGCACTTTATA+TGG | - | chr5.3:6417242-6417261 | MS.gene21538:intron | 30.0% |
| !!! | AACAATTTTTTTTACAGGGG+GGG | - | chr5.3:6416403-6416422 | MS.gene21538:intron | 30.0% |
| !!! | ACCTTTTTTACTTTTGCATC+AGG | - | chr5.3:6417689-6417708 | MS.gene21538:intron | 30.0% |
| !!! | CCTTTTTTACTTTTGCATCA+GGG | - | chr5.3:6417690-6417709 | MS.gene21538:intron | 30.0% |
| !!! | CTACTGGTTTTCATGTTTTT+AGG | - | chr5.3:6417173-6417192 | MS.gene21538:intron | 30.0% |
| !!! | GAATCTAGTTTTAACATTCC+AGG | - | chr5.3:6414605-6414624 | MS.gene21538:intron | 30.0% |
| AAAAAAGGTTGAACTAGCAG+TGG | - | chr5.3:6415982-6416001 | MS.gene21538:CDS | 35.0% | |
| AACTGTTGAACAAAAAGGCA+AGG | + | chr5.3:6416927-6416946 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr5.3:6415309-6415328 | MS.gene21538:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr5.3:6415037-6415056 | None:intergenic | 35.0% | |
| AATTTGCAGAATGAGGGAAA+TGG | - | chr5.3:6414526-6414545 | MS.gene21538:CDS | 35.0% | |
| ACCCTTTGCCTCTAATAAAA+GGG | + | chr5.3:6415808-6415827 | None:intergenic | 35.0% | |
| ACTGTTGAACAAAAAGGCAA+GGG | + | chr5.3:6416926-6416945 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr5.3:6414957-6414976 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr5.3:6415118-6415137 | None:intergenic | 35.0% | |
| ATATCATACACCAAGTTACG+CGG | + | chr5.3:6415458-6415477 | None:intergenic | 35.0% | |
| CAACAAATTGTAATCAGAGC+CGG | + | chr5.3:6417761-6417780 | None:intergenic | 35.0% | |
| CAACTTCATCTTCACTATCA+CGG | + | chr5.3:6417326-6417345 | None:intergenic | 35.0% | |
| CCCTGATGCAAAAGTAAAAA+AGG | + | chr5.3:6417693-6417712 | None:intergenic | 35.0% | |
| CCTGTAATATAGGTCATTTC+CGG | - | chr5.3:6416220-6416239 | MS.gene21538:intron | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | + | chr5.3:6416222-6416241 | None:intergenic | 35.0% | |
| GAAAAGGATCAAAATGAACG+GGG | + | chr5.3:6417817-6417836 | None:intergenic | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr5.3:6415093-6415112 | None:intergenic | 35.0% | |
| GAAATGACCTATATTACAGG+GGG | + | chr5.3:6416220-6416239 | None:intergenic | 35.0% | |
| GAGAAGAATTTGCAGAATGA+GGG | - | chr5.3:6414520-6414539 | MS.gene21538:CDS | 35.0% | |
| GATCTTGTGCAGTTTACTAT+CGG | - | chr5.3:6417855-6417874 | MS.gene21538:intron | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | + | chr5.3:6416221-6416240 | None:intergenic | 35.0% | |
| GTACATCATCGTATTTAAGC+TGG | + | chr5.3:6415384-6415403 | None:intergenic | 35.0% | |
| GTAGAATGAACATGAACATG+TGG | - | chr5.3:6417474-6417493 | MS.gene21538:intron | 35.0% | |
| GTGCTTATATATAGAGACAG+AGG | - | chr5.3:6415826-6415845 | MS.gene21538:intron | 35.0% | |
| TCACATATAGTATAGCTCTC+CGG | - | chr5.3:6417739-6417758 | MS.gene21538:intron | 35.0% | |
| TGAGAAGAATTTGCAGAATG+AGG | - | chr5.3:6414519-6414538 | MS.gene21538:CDS | 35.0% | |
| TGCTTATATATAAGGACGGA+GGG | + | chr5.3:6415785-6415804 | None:intergenic | 35.0% | |
| TGGAATGTAACTTCAGCAAA+AGG | + | chr5.3:6415518-6415537 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr5.3:6415098-6415117 | None:intergenic | 35.0% | |
| TGTGACATAGAAAGAAAGCA+AGG | + | chr5.3:6416117-6416136 | None:intergenic | 35.0% | |
| TTACGCGGTTTAGATATCTT+GGG | + | chr5.3:6415443-6415462 | None:intergenic | 35.0% | |
| TTATCTGGCATCTCCATAAA+TGG | - | chr5.3:6416945-6416964 | MS.gene21538:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr5.3:6415318-6415337 | None:intergenic | 35.0% |
| ! | ACCCTTTTATTAGAGGCAAA+GGG | - | chr5.3:6415804-6415823 | MS.gene21538:intron | 35.0% |
| ! | AGGGTGCTTATATATAAGGA+CGG | + | chr5.3:6415789-6415808 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.3:6414945-6414964 | None:intergenic | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | chr5.3:6415652-6415671 | MS.gene21538:intron | 35.0% |
| !! | AGTGAAGATGAAGTTGATGA+TGG | - | chr5.3:6417330-6417349 | MS.gene21538:intron | 35.0% |
| !! | CGTTTTTGTTTGGCCTATTA+GGG | - | chr5.3:6416368-6416387 | MS.gene21538:intron | 35.0% |
| !! | GGTTTTTGTTTGGCCTATTA+GGG | + | chr5.3:6416316-6416335 | None:intergenic | 35.0% |
| !! | GTTTTTGTTTGGCCTATTAG+GGG | - | chr5.3:6416369-6416388 | MS.gene21538:intron | 35.0% |
| !! | GTTTTTGTTTGGCCTATTAG+GGG | + | chr5.3:6416388-6416369 | None:intergenic | 35.0% |
| !! | TCGTTTTTGTTTGGCCTATT+AGG | - | chr5.3:6416367-6416386 | MS.gene21538:intron | 35.0% |
| !! | TGGTTTTTGTTTGGCCTATT+AGG | + | chr5.3:6416317-6416336 | None:intergenic | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr5.3:6415416-6415435 | MS.gene21538:CDS | 35.0% |
| !! | TTTTTGTTTGGCCTATTAGG+GGG | - | chr5.3:6416370-6416389 | MS.gene21538:intron | 35.0% |
| !! | TTTTTGTTTGGCCTATTAGG+GGG | + | chr5.3:6416389-6416370 | None:intergenic | 35.0% |
| !!! | ATCTCTGGAACTCTTTTATG+AGG | - | chr5.3:6417979-6417998 | MS.gene21538:intron | 35.0% |
| !!! | CATACCTTTTTGAGTCTGAA+CGG | + | chr5.3:6414736-6414755 | None:intergenic | 35.0% |
| !!! | TTTTGATTTACCCCCCTAAT+AGG | - | chr5.3:6416300-6416319 | MS.gene21538:intron | 35.0% |
| AACTTCAGCAAAAGGAGAAG+TGG | + | chr5.3:6415510-6415529 | None:intergenic | 40.0% | |
| AATTGAACCAACCGCCAAAT+TGG | - | chr5.3:6416039-6416058 | MS.gene21538:intron | 40.0% | |
| ACTCACAGTTTACCGATAAG+TGG | - | chr5.3:6417502-6417521 | MS.gene21538:intron | 40.0% | |
| ACTTCAGCAAAAGGAGAAGT+GGG | + | chr5.3:6415509-6415528 | None:intergenic | 40.0% | |
| AGACTAGACAGGATAGGATT+AGG | + | chr5.3:6415170-6415189 | None:intergenic | 40.0% | |
| AGATTACCCTTCTATCTTCC+AGG | + | chr5.3:6417365-6417384 | None:intergenic | 40.0% | |
| ATCATCGTATTTAAGCTGGG+TGG | + | chr5.3:6415380-6415399 | None:intergenic | 40.0% | |
| ATCTCTAACTTTCACCTCCA+AGG | - | chr5.3:6415479-6415498 | MS.gene21538:intron | 40.0% | |
| CACCCTTTGCCTCTAATAAA+AGG | + | chr5.3:6415809-6415828 | None:intergenic | 40.0% | |
| CCGGAAATGACCTATATTAC+AGG | + | chr5.3:6416223-6416242 | None:intergenic | 40.0% | |
| CTAACAAACAAGAGTGGCAT+GGG | - | chr5.3:6417131-6417150 | MS.gene21538:intron | 40.0% | |
| CTCACAGTTTACCGATAAGT+GGG | - | chr5.3:6417503-6417522 | MS.gene21538:intron | 40.0% | |
| CTGTTGAACAAAAAGGCAAG+GGG | + | chr5.3:6416925-6416944 | None:intergenic | 40.0% | |
| GATATCTAAACCGCGTAACT+TGG | - | chr5.3:6415445-6415464 | MS.gene21538:intron | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr5.3:6415423-6415442 | None:intergenic | 40.0% | |
| GTCTTTACCCCCTGTAATAT+AGG | - | chr5.3:6416210-6416229 | MS.gene21538:intron | 40.0% | |
| GTGCTTATATATAAGGACGG+AGG | + | chr5.3:6415786-6415805 | None:intergenic | 40.0% | |
| GTTACGCGGTTTAGATATCT+TGG | + | chr5.3:6415444-6415463 | None:intergenic | 40.0% | |
| TAACAAACAAGAGTGGCATG+GGG | - | chr5.3:6417132-6417151 | MS.gene21538:intron | 40.0% | |
| TAATTTACAGGGGGGAAAAC+CGG | + | chr5.3:6416242-6416261 | None:intergenic | 40.0% | |
| TAGAAGCAAGACGGAGTATA+TGG | + | chr5.3:6415538-6415557 | None:intergenic | 40.0% | |
| TCCATACACCAAGCATGTTA+GGG | + | chr5.3:6416835-6416854 | None:intergenic | 40.0% | |
| TCTAACAAACAAGAGTGGCA+TGG | - | chr5.3:6417130-6417149 | MS.gene21538:intron | 40.0% | |
| TGCTAACCTGGAAGATAGAA+GGG | - | chr5.3:6417356-6417375 | MS.gene21538:intron | 40.0% | |
| TTAAACGAACCATGACCTAG+AGG | + | chr5.3:6415916-6415935 | None:intergenic | 40.0% | |
| TTCTGTGTTAATGAAGCCCA+TGG | - | chr5.3:6417278-6417297 | MS.gene21538:intron | 40.0% | |
| TTGCTAACCTGGAAGATAGA+AGG | - | chr5.3:6417355-6417374 | MS.gene21538:intron | 40.0% | |
| TTTAAGCTGGGTGGTTGAAA+TGG | + | chr5.3:6415371-6415390 | None:intergenic | 40.0% | |
| TTTGAGTGGTAGGCACAAAT+TGG | - | chr5.3:6417618-6417637 | MS.gene21538:intron | 40.0% | |
| ! | CACCCTTTTATTAGAGGCAA+AGG | - | chr5.3:6415803-6415822 | MS.gene21538:intron | 40.0% |
| ! | CAGAATGATGTAGTCTTGCT+TGG | + | chr5.3:6415636-6415655 | None:intergenic | 40.0% |
| ! | CAGCTCTTTTGCATAATGCT+TGG | + | chr5.3:6418194-6418213 | None:intergenic | 40.0% |
| ! | GGAAATGGTGGGGTAAAATT+TGG | - | chr5.3:6414541-6414560 | MS.gene21538:CDS | 40.0% |
| ! | TTTGATTTACCCCCCCTAAT+AGG | + | chr5.3:6416384-6416403 | None:intergenic | 40.0% |
| !! | GCAGATGCTTGATGATTTTG+TGG | - | chr5.3:6417926-6417945 | MS.gene21538:intron | 40.0% |
| !! | TGCTGTTTAGTTTGAGTGGT+AGG | - | chr5.3:6417608-6417627 | MS.gene21538:intron | 40.0% |
| !! | TTGCTGCTGTTTAGTTTGAG+TGG | - | chr5.3:6417604-6417623 | MS.gene21538:intron | 40.0% |
| !! | TTTTAACTGTGGTAGGGTAC+TGG | - | chr5.3:6418132-6418151 | MS.gene21538:intron | 40.0% |
| !! | TTTTACTTTTGCATCAGGGC+TGG | - | chr5.3:6417694-6417713 | MS.gene21538:intron | 40.0% |
| !! | TTTTGTTTGGCCTATTAGGG+GGG | - | chr5.3:6416371-6416390 | MS.gene21538:intron | 40.0% |
| !! | TTTTGTTTGGCCTATTAGGG+GGG | + | chr5.3:6416390-6416371 | None:intergenic | 40.0% |
| !!! | CATGAGCTGCTTTTCATCTT+TGG | + | chr5.3:6417958-6417977 | None:intergenic | 40.0% |
| AAAAGCAGCTCATGCATCTC+TGG | - | chr5.3:6417964-6417983 | MS.gene21538:intron | 45.0% | |
| AACACTTGTTCCAGTGCCAT+GGG | + | chr5.3:6417297-6417316 | None:intergenic | 45.0% | |
| AACATGTTCCGCGTAATCCA+TGG | + | chr5.3:6414585-6414604 | None:intergenic | 45.0% | |
| AACTCATTCTGCAGAAACCG+TGG | + | chr5.3:6418062-6418081 | None:intergenic | 45.0% | |
| AATTCGCTCCCTAACATGCT+TGG | - | chr5.3:6416824-6416843 | MS.gene21538:intron | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | + | chr5.3:6415143-6415162 | None:intergenic | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr5.3:6415271-6415290 | None:intergenic | 45.0% | |
| ACTCATTCTGCAGAAACCGT+GGG | + | chr5.3:6418061-6418080 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr5.3:6415028-6415047 | None:intergenic | 45.0% | |
| AGCATGTTAGGGAGCGAATT+AGG | + | chr5.3:6416824-6416843 | None:intergenic | 45.0% | |
| ATTCAGGGTCCTCAGAAGAT+TGG | + | chr5.3:6414649-6414668 | None:intergenic | 45.0% | |
| CAGACCGTTCAGACTCAAAA+AGG | - | chr5.3:6414729-6414748 | MS.gene21538:intron | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr5.3:6415223-6415242 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr5.3:6415226-6415245 | MS.gene21538:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr5.3:6415338-6415357 | MS.gene21538:intron | 45.0% | |
| CTTTCACTCACACAGAGTTC+AGG | - | chr5.3:6416761-6416780 | MS.gene21538:intron | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | + | chr5.3:6415144-6415163 | None:intergenic | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr5.3:6415018-6415037 | None:intergenic | 45.0% | |
| GATGAGTGGTAAGACTAGAC+AGG | + | chr5.3:6415181-6415200 | None:intergenic | 45.0% | |
| GTCCATACACCAAGCATGTT+AGG | + | chr5.3:6416836-6416855 | None:intergenic | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | + | chr5.3:6415176-6415195 | None:intergenic | 45.0% | |
| GTTCAACCAGTCGAATCTGA+CGG | - | chr5.3:6416072-6416091 | MS.gene21538:intron | 45.0% | |
| TAACACTTGTTCCAGTGCCA+TGG | + | chr5.3:6417298-6417317 | None:intergenic | 45.0% | |
| TCAACAAGCGAACAGCTAAG+CGG | + | chr5.3:6415750-6415769 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr5.3:6415267-6415286 | MS.gene21538:intron | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | + | chr5.3:6415145-6415164 | None:intergenic | 45.0% | |
| TGACATATTCTCCCCTTTGC+TGG | + | chr5.3:6414485-6414504 | None:intergenic | 45.0% | |
| TGCAGAATGAGGGAAATGGT+GGG | - | chr5.3:6414530-6414549 | MS.gene21538:CDS | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr5.3:6415263-6415282 | None:intergenic | 45.0% | |
| TTCAGGGTCCTCAGAAGATT+GGG | + | chr5.3:6414648-6414667 | None:intergenic | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr5.3:6415357-6415376 | None:intergenic | 45.0% | |
| TTGAATATGGTCGCCATCAG+TGG | + | chr5.3:6418017-6418036 | None:intergenic | 45.0% | |
| TTGCAGAATGAGGGAAATGG+TGG | - | chr5.3:6414529-6414548 | MS.gene21538:CDS | 45.0% | |
| TTTGCTTTAGTAGGCAGAGC+AGG | + | chr5.3:6414698-6414717 | None:intergenic | 45.0% | |
| TTTGTTTGGCCTATTAGGGG+GGG | - | chr5.3:6416372-6416391 | MS.gene21538:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.3:6414876-6414895 | MS.gene21538:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.3:6414875-6414894 | MS.gene21538:intron | 45.0% |
| ! | CAGATTCGACTGGTTGAACA+GGG | + | chr5.3:6416071-6416090 | None:intergenic | 45.0% |
| ! | GAGAACTATTAGTGGGCGAA+AGG | + | chr5.3:6418254-6418273 | None:intergenic | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr5.3:6415262-6415281 | None:intergenic | 45.0% |
| ! | TCAGATTCGACTGGTTGAAC+AGG | + | chr5.3:6416072-6416091 | None:intergenic | 45.0% |
| !! | CCATGACCTAGAGGTATTGT+CGG | + | chr5.3:6415907-6415926 | None:intergenic | 45.0% |
| !! | GAAACAAAGGTGTCCACTGA+TGG | - | chr5.3:6418001-6418020 | MS.gene21538:CDS | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | - | chr5.3:6415665-6415684 | MS.gene21538:intron | 45.0% |
| !! | TCCCTAACATGCTTGGTGTA+TGG | - | chr5.3:6416831-6416850 | MS.gene21538:intron | 45.0% |
| !! | TGATGATGGAGTTGCTAACC+TGG | - | chr5.3:6417344-6417363 | MS.gene21538:intron | 45.0% |
| !! | AAATAAATAAAATAATTTAC+AGG | + | chr5.3:6416254-6416273 | None:intergenic | 5.0% |
| !! | AATAAATAAAATAATTTACA+GGG | + | chr5.3:6416253-6416272 | None:intergenic | 5.0% |
| AAGGAGAAGTGGGTCTACCT+TGG | + | chr5.3:6415499-6415518 | None:intergenic | 50.0% | |
| ACAGAACCGTCAGATTCGAC+TGG | + | chr5.3:6416081-6416100 | None:intergenic | 50.0% | |
| ACTCCGTCTTGCTTCTACTC+AGG | - | chr5.3:6415541-6415560 | MS.gene21538:intron | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | + | chr5.3:6415611-6415630 | None:intergenic | 50.0% | |
| CACCATTAGAGAGAGAGTGG+GGG | + | chr5.3:6415142-6415161 | None:intergenic | 50.0% | |
| CAGTTTACCGATAAGTGGGC+AGG | - | chr5.3:6417507-6417526 | MS.gene21538:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.3:6414877-6414896 | None:intergenic | 50.0% | |
| CCATGGCAACTAGGATGATC+AGG | + | chr5.3:6414568-6414587 | None:intergenic | 50.0% | |
| CCGACAATACCTCTAGGTCA+TGG | - | chr5.3:6415904-6415923 | MS.gene21538:intron | 50.0% | |
| CCTGATCATCCTAGTTGCCA+TGG | - | chr5.3:6414565-6414584 | MS.gene21538:CDS | 50.0% | |
| CTATCAGACAGCAGTCAGAC+CGG | + | chr5.3:6415289-6415308 | None:intergenic | 50.0% | |
| CTCATTCTGCAGAAACCGTG+GGG | + | chr5.3:6418060-6418079 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.3:6414880-6414899 | MS.gene21538:intron | 50.0% | |
| GAAAATGCCTCACAAGCCCA+CGG | + | chr5.3:6418172-6418191 | None:intergenic | 50.0% | |
| GAAAGAACTGCCTCTTCTGC+AGG | + | chr5.3:6416746-6416765 | None:intergenic | 50.0% | |
| GAACAGGGAACCAGCCAATT+TGG | + | chr5.3:6416056-6416075 | None:intergenic | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | + | chr5.3:6415612-6415631 | None:intergenic | 50.0% | |
| GCAGAATGAGGGAAATGGTG+GGG | - | chr5.3:6414531-6414550 | MS.gene21538:CDS | 50.0% | |
| GGTCATGGTTCGTTTAACCC+TGG | - | chr5.3:6415919-6415938 | MS.gene21538:intron | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr5.3:6415276-6415295 | None:intergenic | 50.0% | |
| GTTAATGAAGCCCATGGCAC+TGG | - | chr5.3:6417284-6417303 | MS.gene21538:intron | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | + | chr5.3:6415596-6415615 | None:intergenic | 50.0% | |
| TACCCCCACTCTCTCTCTAA+TGG | - | chr5.3:6415137-6415156 | MS.gene21538:intron | 50.0% | |
| TATTCTCCCCTTTGCTGGAC+AGG | + | chr5.3:6414480-6414499 | None:intergenic | 50.0% | |
| TCAGGGTCCTCAGAAGATTG+GGG | + | chr5.3:6414647-6414666 | None:intergenic | 50.0% | |
| TGAGCAACCTGCCCACTTAT+CGG | + | chr5.3:6417517-6417536 | None:intergenic | 50.0% | |
| TTCGAGCCGACAATACCTCT+AGG | - | chr5.3:6415898-6415917 | MS.gene21538:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+CGG | + | chr5.3:6415215-6415234 | None:intergenic | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+TGG | + | chr5.3:6415573-6415592 | None:intergenic | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr5.3:6415625-6415644 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.3:6414874-6414893 | MS.gene21538:intron | 50.0% |
| ! | CCTAGTTGCCATGGATTACG+CGG | - | chr5.3:6414574-6414593 | MS.gene21538:CDS | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr5.3:6415626-6415645 | None:intergenic | 50.0% |
| !! | GGTATTGTCGGCTCGAATTC+TGG | + | chr5.3:6415895-6415914 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr5.3:6414888-6414907 | MS.gene21538:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.3:6414889-6414908 | None:intergenic | 55.0% | |
| CAGGGAACCAGCCAATTTGG+CGG | + | chr5.3:6416053-6416072 | None:intergenic | 55.0% | |
| CCGCCTGAGTAGAAGCAAGA+CGG | + | chr5.3:6415547-6415566 | None:intergenic | 55.0% | |
| CCGCGTAATCCATGGCAACT+AGG | + | chr5.3:6414577-6414596 | None:intergenic | 55.0% | |
| CCGTCTTGCTTCTACTCAGG+CGG | - | chr5.3:6415544-6415563 | MS.gene21538:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.3:6414882-6414901 | None:intergenic | 55.0% | |
| CGGATGTTGCGTTGGATGAG+TGG | + | chr5.3:6415195-6415214 | None:intergenic | 55.0% | |
| GAACCAACCGCCAAATTGGC+TGG | - | chr5.3:6416043-6416062 | MS.gene21538:intron | 55.0% | |
| GAACCAGCCAATTTGGCGGT+TGG | + | chr5.3:6416049-6416068 | None:intergenic | 55.0% | |
| GAGAAGTGGGTCTACCTTGG+AGG | + | chr5.3:6415496-6415515 | None:intergenic | 55.0% | |
| GCGGAAGCCATACGCTTCTA+AGG | - | chr5.3:6415563-6415582 | MS.gene21538:intron | 55.0% | |
| GGCTGATGGTCATGTTCCGT+GGG | - | chr5.3:6418153-6418172 | MS.gene21538:intron | 55.0% | |
| GTCCTCAGAAGATTGGGGCA+TGG | + | chr5.3:6414642-6414661 | None:intergenic | 55.0% | |
| GTCGTATGCTCCTGCAGAAG+AGG | - | chr5.3:6416733-6416752 | MS.gene21538:intron | 55.0% | |
| TCATGTTCCGTGGGCTTGTG+AGG | - | chr5.3:6418162-6418181 | MS.gene21538:intron | 55.0% | |
| TGCCATGCCCCAATCTTCTG+AGG | - | chr5.3:6414637-6414656 | MS.gene21538:intron | 55.0% | |
| TGGCTGATGGTCATGTTCCG+TGG | - | chr5.3:6418152-6418171 | MS.gene21538:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.3:6414888-6414907 | None:intergenic | 55.0% | |
| ! | CTTCTGCAGGAGCATACGAC+TGG | + | chr5.3:6416733-6416752 | None:intergenic | 55.0% |
| ! | GGCATGGCAATTGAAGCACC+TGG | + | chr5.3:6414626-6414645 | None:intergenic | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | chr5.3:6415259-6415278 | None:intergenic | 55.0% |
| !! | TGTCGGCTCGAATTCTGGTC+TGG | + | chr5.3:6415890-6415909 | None:intergenic | 55.0% |
| !! | TGTGGTAGGGTACTGGCTGA+TGG | - | chr5.3:6418139-6418158 | MS.gene21538:intron | 55.0% |
| ACGGGAGGCTAGAGACTTGG+AGG | + | chr5.3:6415593-6415612 | None:intergenic | 60.0% | |
| AGTGGGCAGGTTGCTCAAGC+TGG | - | chr5.3:6417520-6417539 | MS.gene21538:intron | 60.0% | |
| CGAGGGAGGAGTTAAACGGG+AGG | + | chr5.3:6415608-6415627 | None:intergenic | 60.0% | |
| CGGAGATGCGGATGTTGCGT+TGG | + | chr5.3:6415203-6415222 | None:intergenic | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr5.3:6415622-6415641 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 6414473 | 6418276 | 6414473 | ID=MS.gene21538 |
| chr5.3 | mRNA | 6414473 | 6418276 | 6414473 | ID=MS.gene21538.t1;Parent=MS.gene21538 |
| chr5.3 | exon | 6418202 | 6418276 | 6418202 | ID=MS.gene21538.t1.exon1;Parent=MS.gene21538.t1 |
| chr5.3 | CDS | 6418202 | 6418276 | 6418202 | ID=cds.MS.gene21538.t1;Parent=MS.gene21538.t1 |
| chr5.3 | exon | 6417999 | 6418122 | 6417999 | ID=MS.gene21538.t1.exon2;Parent=MS.gene21538.t1 |
| chr5.3 | CDS | 6417999 | 6418122 | 6417999 | ID=cds.MS.gene21538.t1;Parent=MS.gene21538.t1 |
| chr5.3 | exon | 6415967 | 6416015 | 6415967 | ID=MS.gene21538.t1.exon3;Parent=MS.gene21538.t1 |
| chr5.3 | CDS | 6415967 | 6416015 | 6415967 | ID=cds.MS.gene21538.t1;Parent=MS.gene21538.t1 |
| chr5.3 | exon | 6415372 | 6415455 | 6415372 | ID=MS.gene21538.t1.exon4;Parent=MS.gene21538.t1 |
| chr5.3 | CDS | 6415372 | 6415455 | 6415372 | ID=cds.MS.gene21538.t1;Parent=MS.gene21538.t1 |
| chr5.3 | exon | 6414740 | 6414819 | 6414740 | ID=MS.gene21538.t1.exon5;Parent=MS.gene21538.t1 |
| chr5.3 | CDS | 6414740 | 6414819 | 6414740 | ID=cds.MS.gene21538.t1;Parent=MS.gene21538.t1 |
| chr5.3 | exon | 6414473 | 6414602 | 6414473 | ID=MS.gene21538.t1.exon6;Parent=MS.gene21538.t1 |
| chr5.3 | CDS | 6414473 | 6414602 | 6414473 | ID=cds.MS.gene21538.t1;Parent=MS.gene21538.t1 |
| Gene Sequence |
| Protein sequence |
