Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21946.t1 | XP_024640138.1 | 95.6 | 688 | 21 | 2 | 1 | 682 | 1 | 685 | 0.00E+00 | 1300.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21946.t1 | Q94CJ8 | 42.2 | 673 | 314 | 25 | 1 | 649 | 1 | 622 | 1.8e-114 | 414.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21946.t1 | G7K989 | 95.6 | 688 | 21 | 2 | 1 | 682 | 1 | 685 | 0.0e+00 | 1300.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051248 | MS.gene21946 | 0.804544 | 2.05E-49 | -1.69E-46 |
| MS.gene059154 | MS.gene21946 | 0.802254 | 6.12E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21946.t1 | MTR_5g008900 | 96.657 | 688 | 14 | 2 | 1 | 682 | 1 | 685 | 0.0 | 1362 |
| MS.gene21946.t1 | MTR_3g436060 | 42.755 | 697 | 336 | 23 | 1 | 672 | 1 | 659 | 1.32e-135 | 415 |
| MS.gene21946.t1 | MTR_0005s0130 | 44.610 | 538 | 247 | 19 | 158 | 677 | 128 | 632 | 4.51e-115 | 360 |
| MS.gene21946.t1 | MTR_4g043660 | 44.610 | 538 | 247 | 19 | 158 | 677 | 128 | 632 | 4.51e-115 | 360 |
| MS.gene21946.t1 | MTR_5g094700 | 34.021 | 388 | 190 | 11 | 178 | 521 | 111 | 476 | 1.95e-48 | 179 |
| MS.gene21946.t1 | MTR_3g056160 | 36.533 | 323 | 144 | 10 | 232 | 521 | 159 | 453 | 4.22e-45 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 1 | 620 | 1.53e-133 | 407 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 1 | 620 | 1.53e-133 | 407 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 1 | 620 | 1.53e-133 | 407 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 1 | 620 | 1.53e-133 | 407 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 1 | 620 | 1.53e-133 | 407 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 1 | 620 | 1.53e-133 | 407 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 1 | 620 | 1.53e-133 | 407 |
| MS.gene21946.t1 | AT3G21100 | 43.932 | 651 | 264 | 26 | 7 | 641 | 7 | 572 | 4.55e-133 | 405 |
| MS.gene21946.t1 | AT3G21100 | 43.932 | 651 | 264 | 26 | 7 | 641 | 7 | 572 | 4.55e-133 | 405 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 32 | 651 | 6.50e-133 | 407 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 32 | 651 | 6.50e-133 | 407 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 32 | 651 | 6.50e-133 | 407 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 32 | 651 | 6.50e-133 | 407 |
| MS.gene21946.t1 | AT5G12440 | 42.623 | 671 | 310 | 26 | 1 | 647 | 32 | 651 | 6.50e-133 | 407 |
| MS.gene21946.t1 | AT3G21100 | 43.712 | 652 | 265 | 26 | 7 | 641 | 7 | 573 | 2.42e-132 | 403 |
| MS.gene21946.t1 | AT3G21100 | 43.712 | 652 | 265 | 26 | 7 | 641 | 7 | 573 | 2.42e-132 | 403 |
| MS.gene21946.t1 | AT3G51950 | 41.438 | 473 | 181 | 19 | 210 | 670 | 126 | 514 | 2.25e-78 | 260 |
| MS.gene21946.t1 | AT3G51950 | 41.489 | 94 | 49 | 3 | 1 | 92 | 1 | 90 | 1.52e-11 | 67.8 |
| MS.gene21946.t1 | AT3G51950 | 41.438 | 473 | 181 | 19 | 210 | 670 | 126 | 514 | 2.25e-78 | 260 |
| MS.gene21946.t1 | AT3G51950 | 41.489 | 94 | 49 | 3 | 1 | 92 | 1 | 90 | 1.52e-11 | 67.8 |
| MS.gene21946.t1 | AT3G51950 | 41.438 | 473 | 181 | 19 | 210 | 670 | 126 | 514 | 2.25e-78 | 260 |
| MS.gene21946.t1 | AT3G51950 | 41.489 | 94 | 49 | 3 | 1 | 92 | 1 | 90 | 1.52e-11 | 67.8 |
| MS.gene21946.t1 | AT3G51950 | 41.438 | 473 | 181 | 19 | 210 | 670 | 126 | 514 | 2.25e-78 | 260 |
| MS.gene21946.t1 | AT3G51950 | 41.489 | 94 | 49 | 3 | 1 | 92 | 1 | 90 | 1.52e-11 | 67.8 |
| MS.gene21946.t1 | AT1G51520 | 34.259 | 648 | 262 | 25 | 7 | 647 | 7 | 497 | 1.51e-75 | 252 |
| MS.gene21946.t1 | AT1G51520 | 37.354 | 514 | 211 | 20 | 7 | 515 | 7 | 414 | 2.70e-73 | 243 |
| MS.gene21946.t1 | AT3G63450 | 50.233 | 215 | 72 | 5 | 329 | 543 | 16 | 195 | 3.29e-54 | 188 |
| MS.gene21946.t1 | AT3G63450 | 49.778 | 225 | 77 | 6 | 319 | 543 | 117 | 305 | 1.24e-53 | 190 |
| MS.gene21946.t1 | AT3G63450 | 49.778 | 225 | 77 | 6 | 319 | 543 | 117 | 305 | 1.24e-53 | 190 |
| MS.gene21946.t1 | AT3G63450 | 49.778 | 225 | 77 | 6 | 319 | 543 | 117 | 305 | 1.24e-53 | 190 |
| MS.gene21946.t1 | AT3G63450 | 49.778 | 225 | 75 | 6 | 319 | 543 | 117 | 303 | 1.37e-53 | 189 |
| MS.gene21946.t1 | AT3G63450 | 49.778 | 225 | 75 | 6 | 319 | 543 | 117 | 303 | 1.37e-53 | 189 |
| MS.gene21946.t1 | AT3G63450 | 49.778 | 225 | 77 | 6 | 319 | 543 | 117 | 305 | 1.49e-53 | 189 |
| MS.gene21946.t1 | AT2G05160 | 38.153 | 249 | 108 | 8 | 232 | 444 | 157 | 395 | 2.75e-37 | 147 |
| MS.gene21946.t1 | AT2G05160 | 38.153 | 249 | 108 | 8 | 232 | 444 | 157 | 395 | 2.75e-37 | 147 |
| MS.gene21946.t1 | AT2G05160 | 38.095 | 252 | 104 | 10 | 232 | 444 | 157 | 395 | 3.21e-37 | 145 |
| MS.gene21946.t1 | AT3G52980 | 37.500 | 224 | 84 | 10 | 232 | 424 | 165 | 363 | 1.11e-26 | 113 |
| MS.gene21946.t1 | AT1G51530 | 37.931 | 174 | 85 | 4 | 377 | 548 | 185 | 337 | 5.69e-21 | 96.3 |
Find 184 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTTTCTTGCTATGGTTTC+TGG | 0.060082 | 5.1:+2884007 | MS.gene21946:CDS |
| GACTCTTCAGCCTCCTTTCT+TGG | 0.133175 | 5.1:-2886143 | None:intergenic |
| GTTTGTCACCTTTGTCTTTC+CGG | 0.179944 | 5.1:+2885599 | MS.gene21946:CDS |
| CTCACTTCTGCTGGTTCTTT+AGG | 0.186781 | 5.1:+2886406 | MS.gene21946:CDS |
| TCTTCATAACCTTGCTATTA+GGG | 0.243813 | 5.1:+2882979 | MS.gene21946:CDS |
| GCAAGAAACTCATTCCTTTC+GGG | 0.247828 | 5.1:-2883995 | None:intergenic |
| CCTTCACCTCTTAACCCTAT+TGG | 0.270082 | 5.1:+2883043 | MS.gene21946:CDS |
| TTCTTCATAACCTTGCTATT+AGG | 0.270313 | 5.1:+2882978 | MS.gene21946:CDS |
| TTTGGACTGATAGGGTTCTT+TGG | 0.277604 | 5.1:-2883196 | None:intergenic |
| GCCTCCTTTCTTGGAGTTCA+AGG | 0.288088 | 5.1:-2886134 | None:intergenic |
| GGTTGATCCGCGTCTTGAAA+TGG | 0.288113 | 5.1:+2883393 | MS.gene21946:CDS |
| GAAGAATATTTCAACATTAC+TGG | 0.303045 | 5.1:+2883962 | MS.gene21946:CDS |
| ATATTCTCATAAGACATTAA+AGG | 0.311072 | 5.1:-2883226 | None:intergenic |
| TATCTTATTGAGAAGGAAAA+TGG | 0.311434 | 5.1:+2886083 | MS.gene21946:CDS |
| TCTCTCTGTTGGTGCTCCTT+TGG | 0.323983 | 5.1:+2886215 | MS.gene21946:CDS |
| ATCGGATTATTCTTGAAATC+TGG | 0.325085 | 5.1:-2886174 | None:intergenic |
| TCTGCAAATGATGCTAGTTT+TGG | 0.328687 | 5.1:+2883484 | MS.gene21946:CDS |
| GCTGTTGGTGGCAGTGGTGC+TGG | 0.330637 | 5.1:+2883256 | MS.gene21946:CDS |
| CATCACCTTCTGGTAATGTT+TGG | 0.334098 | 5.1:+2883158 | MS.gene21946:CDS |
| AGCAAGAAACTCATTCCTTT+CGG | 0.335824 | 5.1:-2883996 | None:intergenic |
| TACCAGCAAAAGCGCATGTT+TGG | 0.336745 | 5.1:+2885576 | MS.gene21946:CDS |
| GGATTAAACTTTGGACTGAT+AGG | 0.338960 | 5.1:-2883205 | None:intergenic |
| TGCTGAGAGTGGGAATTTAA+AGG | 0.339269 | 5.1:+2886498 | MS.gene21946:CDS |
| GATTCGATTGATGCGAATTC+TGG | 0.341022 | 5.1:+2883604 | MS.gene21946:CDS |
| AAGATGTTTCGGAGTACTTC+AGG | 0.343875 | 5.1:+2884098 | MS.gene21946:CDS |
| GTCGTCTAACGGCGATGATT+TGG | 0.347901 | 5.1:+2883372 | MS.gene21946:CDS |
| AGTTTCTTGCTATGGTTTCT+GGG | 0.349367 | 5.1:+2884008 | MS.gene21946:CDS |
| GATGAAGTGATTCTTCCAAT+AGG | 0.362935 | 5.1:-2883058 | None:intergenic |
| CACGTGAGTCACATATGAAA+TGG | 0.366446 | 5.1:-2885656 | None:intergenic |
| AAATCTCCTTGGATGTTATC+AGG | 0.366797 | 5.1:-2886285 | None:intergenic |
| GATGAAAGTGGATTGGGATT+TGG | 0.371765 | 5.1:+2883511 | MS.gene21946:CDS |
| TTCACCCAAGTTTGAGGGAT+TGG | 0.382468 | 5.1:+2883639 | MS.gene21946:CDS |
| ATTCAAAGATGAAGATGTTT+CGG | 0.383022 | 5.1:+2884087 | MS.gene21946:CDS |
| ACCATGAACAAACTTACAAT+TGG | 0.396580 | 5.1:-2883581 | None:intergenic |
| GACATTAAAGGATTAAACTT+TGG | 0.397652 | 5.1:-2883214 | None:intergenic |
| AAATCTTCTCCTAGAGGAAC+TGG | 0.399520 | 5.1:+2883100 | MS.gene21946:CDS |
| TATTAGGGTAAAGACCCATT+TGG | 0.399912 | 5.1:+2882994 | MS.gene21946:CDS |
| GAACAAGTTCATATTCTTCA+AGG | 0.400230 | 5.1:-2882931 | None:intergenic |
| TGAATCGACAACATCTGCTT+CGG | 0.405313 | 5.1:+2886781 | MS.gene21946:CDS |
| AGGAACCCTTCATCACCTTC+TGG | 0.405702 | 5.1:+2883148 | MS.gene21946:CDS |
| TCCAATTGTAAGTTTGTTCA+TGG | 0.406070 | 5.1:+2883580 | MS.gene21946:CDS |
| GTTGATCCGCGTCTTGAAAT+GGG | 0.407371 | 5.1:+2883394 | MS.gene21946:CDS |
| TGGGCGTTGGTGGTCAGAAT+TGG | 0.414377 | 5.1:+2883413 | MS.gene21946:CDS |
| TTAAGAGGTGAAGGTGAAGA+AGG | 0.415332 | 5.1:-2883034 | None:intergenic |
| ATTAGGGTAAAGACCCATTT+GGG | 0.415903 | 5.1:+2882995 | MS.gene21946:CDS |
| GTACTCTCATTAGCCACTTC+CGG | 0.418314 | 5.1:-2886728 | None:intergenic |
| ATATTTCAACATTACTGGTC+GGG | 0.426560 | 5.1:+2883967 | MS.gene21946:CDS |
| CGCAAATGCTGCCGCAGCCA+CGG | 0.428719 | 5.1:-2883933 | None:intergenic |
| TGAATTGTAAAGAACTTAAA+CGG | 0.431400 | 5.1:-2886819 | None:intergenic |
| GAATCGACAACATCTGCTTC+GGG | 0.431778 | 5.1:+2886782 | MS.gene21946:CDS |
| ATGTACTTGTCGTACGAAAC+CGG | 0.434069 | 5.1:-2883751 | None:intergenic |
| TTGTTCCAATCCCTCAAACT+TGG | 0.434886 | 5.1:-2883644 | None:intergenic |
| ACGTGAGTCACATATGAAAT+GGG | 0.436440 | 5.1:-2885655 | None:intergenic |
| CAAGGTGCTGTTGGTGGCAG+TGG | 0.437766 | 5.1:+2883250 | MS.gene21946:CDS |
| ATGAAGTGATTCTTCCAATA+GGG | 0.438078 | 5.1:-2883057 | None:intergenic |
| CAAATTGCTGCTGCTGATGT+TGG | 0.441947 | 5.1:-2885810 | None:intergenic |
| TGTTGGTTCACCCAAGTTTG+AGG | 0.444572 | 5.1:+2883633 | MS.gene21946:CDS |
| GGTGTTGATGAAAGTGGATT+GGG | 0.445623 | 5.1:+2883505 | MS.gene21946:CDS |
| ATTCTTCCAATAGGGTTAAG+AGG | 0.447622 | 5.1:-2883049 | None:intergenic |
| ACCAGCAAAAGCGCATGTTT+GGG | 0.448689 | 5.1:+2885577 | MS.gene21946:CDS |
| GTTGGTTCACCCAAGTTTGA+GGG | 0.449991 | 5.1:+2883634 | MS.gene21946:CDS |
| TCTTTGAATGTGCTTTCAGC+AGG | 0.457800 | 5.1:-2884073 | None:intergenic |
| TGGTGTTGATGAAAGTGGAT+TGG | 0.458084 | 5.1:+2883504 | MS.gene21946:CDS |
| GGTAAGGAATTCTCACATCT+TGG | 0.459599 | 5.1:-2885557 | None:intergenic |
| GCTGCATCACAACTTGCTGC+TGG | 0.462022 | 5.1:+2883718 | MS.gene21946:CDS |
| TAGATAGGTTCATACCCAAA+TGG | 0.462403 | 5.1:-2883009 | None:intergenic |
| CGTCTTGAAATGGGCGTTGG+TGG | 0.465802 | 5.1:+2883403 | MS.gene21946:CDS |
| TAAGAGGTGAAGGTGAAGAA+GGG | 0.469413 | 5.1:-2883033 | None:intergenic |
| TGATTTCTCTCCACCGGAAG+TGG | 0.471635 | 5.1:+2886715 | MS.gene21946:CDS |
| ATCTGCCGCGAAGCCGAGTT+AGG | 0.473872 | 5.1:-2884037 | None:intergenic |
| AAGGAATGAGTTTCTTGCTA+TGG | 0.474746 | 5.1:+2884000 | MS.gene21946:CDS |
| GCTACTGCTGCTGCTGAGAG+TGG | 0.476207 | 5.1:+2886487 | MS.gene21946:CDS |
| AAGGTGAAGAAGGGGTAGAT+AGG | 0.478323 | 5.1:-2883024 | None:intergenic |
| AGTGGCAGCCTCACTTCTGC+TGG | 0.479574 | 5.1:+2886397 | MS.gene21946:CDS |
| TTTAGCATGTTGTCCTGACC+AGG | 0.479663 | 5.1:+2882955 | MS.gene21946:CDS |
| AGGTTATGAAGAACCTGGTC+AGG | 0.480573 | 5.1:-2882968 | None:intergenic |
| TGCTGCTGGTGGAACATCAC+CGG | 0.481410 | 5.1:+2883732 | MS.gene21946:CDS |
| GAGAAGGAAAATGGAGGAGC+AGG | 0.484754 | 5.1:+2886092 | MS.gene21946:CDS |
| CTGCGCTGGTGGTGGTGAAT+CGG | 0.486467 | 5.1:-2886192 | None:intergenic |
| GGTGAAGCAAAGAGACTGTC+AGG | 0.486964 | 5.1:-2886665 | None:intergenic |
| AAGATGTCAACTTACTTGTC+AGG | 0.488252 | 5.1:-2885714 | None:intergenic |
| TCCGTCTGATTTCTCTCCAC+CGG | 0.488582 | 5.1:+2886709 | MS.gene21946:CDS |
| GATTAAACTTTGGACTGATA+GGG | 0.491737 | 5.1:-2883204 | None:intergenic |
| AGGTGCTGCATCTGAGCAGC+AGG | 0.492634 | 5.1:+2886426 | MS.gene21946:CDS |
| GCGAATTCTGGTGCTGGTGT+TGG | 0.495593 | 5.1:+2883616 | MS.gene21946:CDS |
| GAGAAATTTGATTACCAGGA+TGG | 0.500480 | 5.1:-2885897 | None:intergenic |
| TTACCAGGATGGAAATCAAA+AGG | 0.503183 | 5.1:-2885886 | None:intergenic |
| GCTTCACCAACAAAAGCAGC+TGG | 0.504326 | 5.1:+2886680 | MS.gene21946:CDS |
| ACTAACCTGTAAAATCTCCT+TGG | 0.506306 | 5.1:-2886296 | None:intergenic |
| AGATAGGTTCATACCCAAAT+GGG | 0.506648 | 5.1:-2883008 | None:intergenic |
| CATGTCTTTACTTTGCTAGA+GGG | 0.506660 | 5.1:+2883542 | MS.gene21946:CDS |
| AATATGACTCTCACTGTCTC+CGG | 0.508178 | 5.1:-2885618 | None:intergenic |
| TCAACATTACTGGTCGGGGC+AGG | 0.511014 | 5.1:+2883972 | MS.gene21946:CDS |
| GGTGGTCAGAATTGGATCTC+TGG | 0.511430 | 5.1:+2883421 | MS.gene21946:CDS |
| CTACTGCTGCTGCTGAGAGT+GGG | 0.512956 | 5.1:+2886488 | MS.gene21946:CDS |
| TAATCACCATTATTAACCCT+TGG | 0.513837 | 5.1:-2883298 | None:intergenic |
| TGTTCCAATCCCTCAAACTT+GGG | 0.514806 | 5.1:-2883643 | None:intergenic |
| GATAGGGTTCTTTGGAAAAG+AGG | 0.515810 | 5.1:-2883188 | None:intergenic |
| ACATTACCAGAAGGTGATGA+AGG | 0.516499 | 5.1:-2883154 | None:intergenic |
| GAATGTGCTTTCAGCAGGAA+AGG | 0.517326 | 5.1:-2884068 | None:intergenic |
| TGAAGAGTTCATGAGGTTCA+AGG | 0.521920 | 5.1:+2883669 | MS.gene21946:CDS |
| TTTCTCAATGAGTCGTCTAA+CGG | 0.522774 | 5.1:+2883361 | MS.gene21946:CDS |
| TAACATGGCTATGAAGTTGA+TGG | 0.523547 | 5.1:-2886245 | None:intergenic |
| ATAGGGTTCTTTGGAAAAGA+GGG | 0.526250 | 5.1:-2883187 | None:intergenic |
| CCATGTCTTTACTTTGCTAG+AGG | 0.529183 | 5.1:+2883541 | MS.gene21946:CDS |
| AGAGGAACTGGACTTAGTAA+TGG | 0.530744 | 5.1:+2883112 | MS.gene21946:CDS |
| AAGAGGTGAAGGTGAAGAAG+GGG | 0.530887 | 5.1:-2883032 | None:intergenic |
| CTGGTCGGGGCAGGCCCGAA+AGG | 0.534386 | 5.1:+2883981 | MS.gene21946:CDS |
| AACATGGCTATGAAGTTGAT+GGG | 0.534397 | 5.1:-2886244 | None:intergenic |
| CTTCTCAATAAGATATCATG+TGG | 0.536105 | 5.1:-2886075 | None:intergenic |
| TTACTAAGTCCAGTTCCTCT+AGG | 0.536989 | 5.1:-2883109 | None:intergenic |
| ATTGATGCGAATTCTGGTGC+TGG | 0.538893 | 5.1:+2883610 | MS.gene21946:CDS |
| ATGCTCATAATATTCATAAG+AGG | 0.539122 | 5.1:+2883455 | MS.gene21946:CDS |
| GGCTGCGGCAGCATTTGCGA+TGG | 0.539812 | 5.1:+2883937 | MS.gene21946:CDS |
| AAGGATGTTGCAAAGTCTGA+AGG | 0.540390 | 5.1:+2886517 | MS.gene21946:CDS |
| TATTTCAACATTACTGGTCG+GGG | 0.542341 | 5.1:+2883968 | MS.gene21946:CDS |
| GCATCACAACTTGCTGCTGG+TGG | 0.543311 | 5.1:+2883721 | MS.gene21946:CDS |
| CATAGCCATGTTAACCATGC+AGG | 0.544634 | 5.1:+2886255 | MS.gene21946:CDS |
| TTCTGGGGACAAGCCTAACT+CGG | 0.544864 | 5.1:+2884024 | MS.gene21946:CDS |
| CACCAGCGCAGTCTCTCTGT+TGG | 0.552012 | 5.1:+2886204 | MS.gene21946:CDS |
| ACATTTCAGAGCCGTGGCTG+CGG | 0.553398 | 5.1:+2883922 | MS.gene21946:intron |
| ATCTGCTTCGGGTGACAACA+TGG | 0.554785 | 5.1:+2886793 | MS.gene21946:CDS |
| TTGTTGACTCTACAGAAATG+TGG | 0.554888 | 5.1:+2886631 | MS.gene21946:intron |
| TGCTCAGCAGCATCAAAGAA+TGG | 0.555393 | 5.1:+2883693 | MS.gene21946:CDS |
| AAGTCCTTGAACTCCAAGAA+AGG | 0.556107 | 5.1:+2886130 | MS.gene21946:CDS |
| GAAGGCGTAGATCTCGGCAT+GGG | 0.556601 | 5.1:+2886535 | MS.gene21946:CDS |
| AAGTCTGAAGGCGTAGATCT+CGG | 0.557200 | 5.1:+2886529 | MS.gene21946:CDS |
| CACATGATATCTTATTGAGA+AGG | 0.557830 | 5.1:+2886076 | MS.gene21946:CDS |
| CACTGCCACCAACAGCACCT+TGG | 0.559329 | 5.1:-2883249 | None:intergenic |
| AATATTTCAACATTACTGGT+CGG | 0.562602 | 5.1:+2883966 | MS.gene21946:CDS |
| AAAGACCTGCATGGTTAACA+TGG | 0.565559 | 5.1:-2886260 | None:intergenic |
| GGAATTCTCACATCTTGGAC+AGG | 0.567021 | 5.1:-2885552 | None:intergenic |
| GTTTCTTGCTATGGTTTCTG+GGG | 0.567026 | 5.1:+2884009 | MS.gene21946:CDS |
| TATGTTACATTTCAGAGCCG+TGG | 0.567197 | 5.1:+2883916 | MS.gene21946:intron |
| CAACAGAGAGACTGCGCTGG+TGG | 0.569130 | 5.1:-2886203 | None:intergenic |
| CCAATAGGGTTAAGAGGTGA+AGG | 0.570288 | 5.1:-2883043 | None:intergenic |
| GACTTTAGCAAGAACCACAT+TGG | 0.572181 | 5.1:-2882855 | None:intergenic |
| GAGAATATCCAAGGTGCTGT+TGG | 0.575381 | 5.1:+2883241 | MS.gene21946:CDS |
| TTAGACGACTCATTGAGAAA+AGG | 0.576395 | 5.1:-2883358 | None:intergenic |
| CACTGTCTCCGGAAAGACAA+AGG | 0.581924 | 5.1:-2885607 | None:intergenic |
| TGTGAAACCCTACAAGGAGA+AGG | 0.583303 | 5.1:+2885683 | MS.gene21946:CDS |
| TCCTTGAACTCCAAGAAAGG+AGG | 0.583568 | 5.1:+2886133 | MS.gene21946:CDS |
| CCGCGTCTTGAAATGGGCGT+TGG | 0.584382 | 5.1:+2883400 | MS.gene21946:CDS |
| ATGTCTTATGAGAATATCCA+AGG | 0.586654 | 5.1:+2883232 | MS.gene21946:CDS |
| CTTTCCATTGCAGGCTACAG+TGG | 0.586758 | 5.1:+2886379 | MS.gene21946:intron |
| CTTTCTCCTGATAACATCCA+AGG | 0.587933 | 5.1:+2886279 | MS.gene21946:CDS |
| CAGAGAGACTGCGCTGGTGG+TGG | 0.594991 | 5.1:-2886200 | None:intergenic |
| GTTGGTGGCAGTGGTGCTGG+TGG | 0.595287 | 5.1:+2883259 | MS.gene21946:CDS |
| ACAAGCCTAACTCGGCTTCG+CGG | 0.597420 | 5.1:+2884032 | MS.gene21946:CDS |
| GCTGCGGCAGCATTTGCGAT+GGG | 0.597928 | 5.1:+2883938 | MS.gene21946:CDS |
| AAGCAAAGAGACTGTCAGGA+AGG | 0.599815 | 5.1:-2886661 | None:intergenic |
| TCTTTAGAGTCAAACGCAGA+GGG | 0.601397 | 5.1:-2885862 | None:intergenic |
| TAGCAAGGTTATGAAGAACC+TGG | 0.603647 | 5.1:-2882973 | None:intergenic |
| GTGAGAGTCATATTATCGAA+AGG | 0.603657 | 5.1:+2885627 | MS.gene21946:CDS |
| GGGTCTTTACCCTAATAGCA+AGG | 0.608257 | 5.1:-2882988 | None:intergenic |
| TCAGCAGCAGCAATTTGAGA+GGG | 0.609147 | 5.1:+2885816 | MS.gene21946:CDS |
| CCTCTAGCAAAGTAAAGACA+TGG | 0.612058 | 5.1:-2883541 | None:intergenic |
| GTGAAACCCTACAAGGAGAA+GGG | 0.615151 | 5.1:+2885684 | MS.gene21946:CDS |
| CATTACCAGAAGGTGATGAA+GGG | 0.615959 | 5.1:-2883153 | None:intergenic |
| AGCAGCACAGTGATAATCAA+AGG | 0.615972 | 5.1:+2883788 | MS.gene21946:CDS |
| CTCTCATTAGCCACTTCCGG+TGG | 0.619392 | 5.1:-2886725 | None:intergenic |
| AGCAAAGAGACTGTCAGGAA+GGG | 0.620621 | 5.1:-2886660 | None:intergenic |
| AATTGGATCTCTGGTAACAA+TGG | 0.622958 | 5.1:+2883430 | MS.gene21946:CDS |
| ATCAGCAGCAGCAATTTGAG+AGG | 0.624147 | 5.1:+2885815 | MS.gene21946:CDS |
| TGTGCTTGTGAAACCCTACA+AGG | 0.627297 | 5.1:+2885677 | MS.gene21946:CDS |
| TCCGGTGGAGAGAAATCAGA+CGG | 0.628112 | 5.1:-2886710 | None:intergenic |
| GTAGCAGCATCAATGCAAGA+TGG | 0.631513 | 5.1:-2886469 | None:intergenic |
| CACCAACAGAGAGACTGCGC+TGG | 0.632218 | 5.1:-2886206 | None:intergenic |
| CTAAAGAACCAGCAGAAGTG+AGG | 0.639544 | 5.1:-2886405 | None:intergenic |
| AACAACATGAAGAGTTCATG+AGG | 0.641597 | 5.1:+2883662 | MS.gene21946:CDS |
| TTCTTTAGAGTCAAACGCAG+AGG | 0.643087 | 5.1:-2885863 | None:intergenic |
| AATATCCAAGGTGCTGTTGG+TGG | 0.644306 | 5.1:+2883244 | MS.gene21946:CDS |
| TGAAGGCGTAGATCTCGGCA+TGG | 0.644522 | 5.1:+2886534 | MS.gene21946:CDS |
| CTTATTGAGAAGGAAAATGG+AGG | 0.653298 | 5.1:+2886086 | MS.gene21946:CDS |
| ACATGGCTATGAAGTTGATG+GGG | 0.654909 | 5.1:-2886243 | None:intergenic |
| TTCTTATGAAGCAACCAATG+TGG | 0.670186 | 5.1:+2882841 | MS.gene21946:CDS |
| AAGGCGTAGATCTCGGCATG+GGG | 0.671195 | 5.1:+2886536 | MS.gene21946:CDS |
| TCAGCAGCATCAAAGAATGG+TGG | 0.671588 | 5.1:+2883696 | MS.gene21946:CDS |
| CGTGAGTCACATATGAAATG+GGG | 0.678147 | 5.1:-2885654 | None:intergenic |
| AACGCAGAGGGACTTAAACA+TGG | 0.682483 | 5.1:-2885850 | None:intergenic |
| CCAACGCCCATTTCAAGACG+CGG | 0.684511 | 5.1:-2883400 | None:intergenic |
| CAGCAGCAGCAATTTGAGAG+GGG | 0.685988 | 5.1:+2885817 | MS.gene21946:CDS |
| TATCAGGAGAAAGACCTGCA+TGG | 0.700183 | 5.1:-2886269 | None:intergenic |
| TGTGACCAAACATTACCAGA+AGG | 0.700366 | 5.1:-2883163 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGTTTTAATATTATGTA+TGG | + | chr5.1:2883892-2883911 | MS.gene21946:intron | 10.0% |
| !! | GATCGTATTTATATTTATAT+CGG | + | chr5.1:2886585-2886604 | MS.gene21946:intron | 15.0% |
| !! | TTGTTAATGTTATTCTTATT+TGG | + | chr5.1:2884866-2884885 | MS.gene21946:intron | 15.0% |
| !!! | ATTACGATTTTATGAATAAT+AGG | + | chr5.1:2885191-2885210 | MS.gene21946:intron | 15.0% |
| !! | AAGGTATATTTCTTATAGAT+GGG | + | chr5.1:2883807-2883826 | MS.gene21946:intron | 20.0% |
| !! | ATATTCTCATAAGACATTAA+AGG | - | chr5.1:2883229-2883248 | None:intergenic | 20.0% |
| !! | TTAAATTGCATAATGATGAA+GGG | - | chr5.1:2884496-2884515 | None:intergenic | 20.0% |
| !!! | AAAGGTATATTTCTTATAGA+TGG | + | chr5.1:2883806-2883825 | MS.gene21946:intron | 20.0% |
| !!! | AAATGAATATTGATTTGTCA+AGG | + | chr5.1:2884963-2884982 | MS.gene21946:intron | 20.0% |
| !!! | AATGAATATTGATTTGTCAA+GGG | + | chr5.1:2884964-2884983 | MS.gene21946:intron | 20.0% |
| !!! | AATTTTTTGTACCTATCATT+AGG | + | chr5.1:2885350-2885369 | MS.gene21946:intron | 20.0% |
| !!! | TTGTTATTTTGAAGCAAATT+TGG | + | chr5.1:2885528-2885547 | MS.gene21946:intron | 20.0% |
| ! | AAAAGACACATTACTTAGTT+AGG | - | chr5.1:2884422-2884441 | None:intergenic | 25.0% |
| ! | AAGTAAACAACAAACTAAAG+AGG | - | chr5.1:2883838-2883857 | None:intergenic | 25.0% |
| ! | AATATTTCAACATTACTGGT+CGG | + | chr5.1:2883966-2883985 | MS.gene21946:CDS | 25.0% |
| ! | AGAGGAAAAAGGAAAATTTA+TGG | - | chr5.1:2885979-2885998 | None:intergenic | 25.0% |
| ! | ATATTGCCATTAATTATTCC+AGG | + | chr5.1:2884244-2884263 | MS.gene21946:intron | 25.0% |
| ! | ATGCTCATAATATTCATAAG+AGG | + | chr5.1:2883455-2883474 | MS.gene21946:CDS | 25.0% |
| ! | ATTCAAAGATGAAGATGTTT+CGG | + | chr5.1:2884087-2884106 | MS.gene21946:CDS | 25.0% |
| ! | ATTCCCGAATTGATATTATT+GGG | + | chr5.1:2885764-2885783 | MS.gene21946:intron | 25.0% |
| ! | CTTAAATTGCATAATGATGA+AGG | - | chr5.1:2884497-2884516 | None:intergenic | 25.0% |
| ! | GAAAATGCTTCAAAAATCAT+GGG | + | chr5.1:2882893-2882912 | MS.gene21946:CDS | 25.0% |
| ! | GAAGAATATTTCAACATTAC+TGG | + | chr5.1:2883962-2883981 | MS.gene21946:CDS | 25.0% |
| ! | GACATTAAAGGATTAAACTT+TGG | - | chr5.1:2883217-2883236 | None:intergenic | 25.0% |
| ! | TACTTCATTTGTAACTAACA+TGG | - | chr5.1:2885077-2885096 | None:intergenic | 25.0% |
| ! | TAGTCCCAATAATATCAATT+CGG | - | chr5.1:2885771-2885790 | None:intergenic | 25.0% |
| ! | TATATCACCTTATCATAGAT+AGG | + | chr5.1:2884173-2884192 | MS.gene21946:intron | 25.0% |
| ! | TATCTTATTGAGAAGGAAAA+TGG | + | chr5.1:2886083-2886102 | MS.gene21946:CDS | 25.0% |
| ! | TATTCCCGAATTGATATTAT+TGG | + | chr5.1:2885763-2885782 | MS.gene21946:intron | 25.0% |
| ! | TGAAAATGCTTCAAAAATCA+TGG | + | chr5.1:2882892-2882911 | MS.gene21946:CDS | 25.0% |
| !! | AAATAGATTTTCCGTGTATT+TGG | - | chr5.1:2884996-2885015 | None:intergenic | 25.0% |
| !! | CGATTTTATGAATAATAGGA+TGG | + | chr5.1:2885195-2885214 | MS.gene21946:intron | 25.0% |
| !! | TGTAACGTTCTTTTTGTATT+AGG | + | chr5.1:2884585-2884604 | MS.gene21946:intron | 25.0% |
| !! | TTTAAAATGTTACCTTCTGA+GGG | - | chr5.1:2885255-2885274 | None:intergenic | 25.0% |
| !!! | AGATTTTGAAAAAGGGTTAT+TGG | - | chr5.1:2883086-2883105 | None:intergenic | 25.0% |
| !!! | ATGAATATTGATTTGTCAAG+GGG | + | chr5.1:2884965-2884984 | MS.gene21946:intron | 25.0% |
| !!! | ATGATTTTTGAAGCATTTTC+AGG | - | chr5.1:2882893-2882912 | None:intergenic | 25.0% |
| !!! | TAGGAGAAGATTTTGAAAAA+GGG | - | chr5.1:2883093-2883112 | None:intergenic | 25.0% |
| !!! | TGATTTTTGAAGCATTTTCA+GGG | - | chr5.1:2882892-2882911 | None:intergenic | 25.0% |
| AAACTCAAATCAATCAAGGA+TGG | - | chr5.1:2884446-2884465 | None:intergenic | 30.0% | |
| AAGCAAACTCAAATCAATCA+AGG | - | chr5.1:2884450-2884469 | None:intergenic | 30.0% | |
| AATTTAAGCTCAGTAATCAC+TGG | + | chr5.1:2884509-2884528 | MS.gene21946:intron | 30.0% | |
| ACCATGAACAAACTTACAAT+TGG | - | chr5.1:2883584-2883603 | None:intergenic | 30.0% | |
| AGAACGTTACACATAAAACA+CGG | - | chr5.1:2884576-2884595 | None:intergenic | 30.0% | |
| AGTCCCAATAATATCAATTC+GGG | - | chr5.1:2885770-2885789 | None:intergenic | 30.0% | |
| ATAACTATTAAGCGTTCTTG+CGG | + | chr5.1:2885296-2885315 | MS.gene21946:intron | 30.0% | |
| ATATTTCAACATTACTGGTC+GGG | + | chr5.1:2883967-2883986 | MS.gene21946:CDS | 30.0% | |
| ATCGGATTATTCTTGAAATC+TGG | - | chr5.1:2886177-2886196 | None:intergenic | 30.0% | |
| ATGAAGTGATTCTTCCAATA+GGG | - | chr5.1:2883060-2883079 | None:intergenic | 30.0% | |
| ATGTCTTATGAGAATATCCA+AGG | + | chr5.1:2883232-2883251 | MS.gene21946:CDS | 30.0% | |
| ATTTCCAACTGAAAGAACAT+TGG | + | chr5.1:2885012-2885031 | MS.gene21946:intron | 30.0% | |
| CACATGATATCTTATTGAGA+AGG | + | chr5.1:2886076-2886095 | MS.gene21946:CDS | 30.0% | |
| CGAATAACCTATCTATGATA+AGG | - | chr5.1:2884183-2884202 | None:intergenic | 30.0% | |
| CTTCTCAATAAGATATCATG+TGG | - | chr5.1:2886078-2886097 | None:intergenic | 30.0% | |
| GAACAAGTTCATATTCTTCA+AGG | - | chr5.1:2882934-2882953 | None:intergenic | 30.0% | |
| GACTTCTAAACTATGTTAAC+AGG | - | chr5.1:2884932-2884951 | None:intergenic | 30.0% | |
| GATTAAACTTTGGACTGATA+GGG | - | chr5.1:2883207-2883226 | None:intergenic | 30.0% | |
| GTGTTTATTTGTGAACCATA+GGG | + | chr5.1:2885222-2885241 | MS.gene21946:intron | 30.0% | |
| TAATCACCATTATTAACCCT+TGG | - | chr5.1:2883301-2883320 | None:intergenic | 30.0% | |
| TCTTATTGCATCTTTACAGA+AGG | + | chr5.1:2885481-2885500 | MS.gene21946:intron | 30.0% | |
| TGTGTTTATTTGTGAACCAT+AGG | + | chr5.1:2885221-2885240 | MS.gene21946:intron | 30.0% | |
| TTAGGTAGGTTCTTACTTAT+AGG | + | chr5.1:2885368-2885387 | MS.gene21946:intron | 30.0% | |
| TTGTTCATTTATGTGTCAGA+AGG | - | chr5.1:2885332-2885351 | None:intergenic | 30.0% | |
| ! | CTCAGAAGGTAACATTTTAA+AGG | + | chr5.1:2885254-2885273 | MS.gene21946:intron | 30.0% |
| ! | TCCAATTGTAAGTTTGTTCA+TGG | + | chr5.1:2883580-2883599 | MS.gene21946:CDS | 30.0% |
| ! | TGAGTTTGCTTGATAATTGA+GGG | + | chr5.1:2884459-2884478 | MS.gene21946:intron | 30.0% |
| ! | TTGAGTTTGCTTGATAATTG+AGG | + | chr5.1:2884458-2884477 | MS.gene21946:intron | 30.0% |
| ! | TTTTCAAAATCTTCTCCTAG+AGG | + | chr5.1:2883094-2883113 | MS.gene21946:CDS | 30.0% |
| ! | TTTTCACCAAGGGTTAATAA+TGG | + | chr5.1:2883292-2883311 | MS.gene21946:CDS | 30.0% |
| ! | TTTTGTACCTATCATTAGGT+AGG | + | chr5.1:2885354-2885373 | MS.gene21946:intron | 30.0% |
| !! | CAAATATTCTCTTTAAAGCG+TGG | - | chr5.1:2884272-2884291 | None:intergenic | 30.0% |
| !! | CGCTTTAAAGAGAATATTTG+CGG | + | chr5.1:2884272-2884291 | MS.gene21946:intron | 30.0% |
| !! | CTAGGAGAAGATTTTGAAAA+AGG | - | chr5.1:2883094-2883113 | None:intergenic | 30.0% |
| !! | CTTTAAAATGTTACCTTCTG+AGG | - | chr5.1:2885256-2885275 | None:intergenic | 30.0% |
| !! | TCTTCATAACCTTGCTATTA+GGG | + | chr5.1:2882979-2882998 | MS.gene21946:CDS | 30.0% |
| !! | TTCTTCATAACCTTGCTATT+AGG | + | chr5.1:2882978-2882997 | MS.gene21946:CDS | 30.0% |
| !!! | GTAATGGTTTTGACTTCAAT+AGG | + | chr5.1:2883128-2883147 | MS.gene21946:CDS | 30.0% |
| AAATCTCCTTGGATGTTATC+AGG | - | chr5.1:2886288-2886307 | None:intergenic | 35.0% | |
| AACAACATGAAGAGTTCATG+AGG | + | chr5.1:2883662-2883681 | MS.gene21946:CDS | 35.0% | |
| AAGATGTCAACTTACTTGTC+AGG | - | chr5.1:2885717-2885736 | None:intergenic | 35.0% | |
| AAGGAATGAGTTTCTTGCTA+TGG | + | chr5.1:2884000-2884019 | MS.gene21946:CDS | 35.0% | |
| AAGTTCATGTACTACTAGCA+TGG | - | chr5.1:2885102-2885121 | None:intergenic | 35.0% | |
| AATTGGATCTCTGGTAACAA+TGG | + | chr5.1:2883430-2883449 | MS.gene21946:CDS | 35.0% | |
| ACAACCAATGTTCTTTCAGT+TGG | - | chr5.1:2885019-2885038 | None:intergenic | 35.0% | |
| ACATTACTTAGTTAGGAGTC+AGG | - | chr5.1:2884415-2884434 | None:intergenic | 35.0% | |
| ACGTGAGTCACATATGAAAT+GGG | - | chr5.1:2885658-2885677 | None:intergenic | 35.0% | |
| ACTAACCTGTAAAATCTCCT+TGG | - | chr5.1:2886299-2886318 | None:intergenic | 35.0% | |
| AGAACTACACCATAGTATAC+AGG | - | chr5.1:2886322-2886341 | None:intergenic | 35.0% | |
| AGATAGGTTCATACCCAAAT+GGG | - | chr5.1:2883011-2883030 | None:intergenic | 35.0% | |
| AGCAAGAAACTCATTCCTTT+CGG | - | chr5.1:2883999-2884018 | None:intergenic | 35.0% | |
| AGGTGAGAAATTTGATTACC+AGG | - | chr5.1:2885904-2885923 | None:intergenic | 35.0% | |
| AGTGATACCTGAAAATGTAC+AGG | - | chr5.1:2884663-2884682 | None:intergenic | 35.0% | |
| ATCAAAAATCCATCTTCCCT+AGG | - | chr5.1:2884376-2884395 | None:intergenic | 35.0% | |
| ATTAGGGTAAAGACCCATTT+GGG | + | chr5.1:2882995-2883014 | MS.gene21946:CDS | 35.0% | |
| ATTCTTCCAATAGGGTTAAG+AGG | - | chr5.1:2883052-2883071 | None:intergenic | 35.0% | |
| CATGTCTTTACTTTGCTAGA+GGG | + | chr5.1:2883542-2883561 | MS.gene21946:CDS | 35.0% | |
| CTTATTGAGAAGGAAAATGG+AGG | + | chr5.1:2886086-2886105 | MS.gene21946:CDS | 35.0% | |
| GAGAAATTTGATTACCAGGA+TGG | - | chr5.1:2885900-2885919 | None:intergenic | 35.0% | |
| GATGAAGTGATTCTTCCAAT+AGG | - | chr5.1:2883061-2883080 | None:intergenic | 35.0% | |
| GGATTAAACTTTGGACTGAT+AGG | - | chr5.1:2883208-2883227 | None:intergenic | 35.0% | |
| GGTAATCAAATTTCTCACCT+TGG | + | chr5.1:2885904-2885923 | MS.gene21946:intron | 35.0% | |
| GTAAGAACCTACCTAATGAT+AGG | - | chr5.1:2885364-2885383 | None:intergenic | 35.0% | |
| GTAAGCTGTTAAAACCATGT+TGG | - | chr5.1:2886347-2886366 | None:intergenic | 35.0% | |
| GTGAGAGTCATATTATCGAA+AGG | + | chr5.1:2885627-2885646 | MS.gene21946:CDS | 35.0% | |
| GTGGAACCTGGAATAATTAA+TGG | - | chr5.1:2884253-2884272 | None:intergenic | 35.0% | |
| GTTAACATACTTTCCATTGC+AGG | + | chr5.1:2886370-2886389 | MS.gene21946:intron | 35.0% | |
| GTTATTGCAATCATGACATC+TGG | + | chr5.1:2885393-2885412 | MS.gene21946:intron | 35.0% | |
| TAACATGGCTATGAAGTTGA+TGG | - | chr5.1:2886248-2886267 | None:intergenic | 35.0% | |
| TAGATAGGTTCATACCCAAA+TGG | - | chr5.1:2883012-2883031 | None:intergenic | 35.0% | |
| TATTAGGGTAAAGACCCATT+TGG | + | chr5.1:2882994-2883013 | MS.gene21946:CDS | 35.0% | |
| TATTTCAACATTACTGGTCG+GGG | + | chr5.1:2883968-2883987 | MS.gene21946:CDS | 35.0% | |
| TCAAAAATCCATCTTCCCTA+GGG | - | chr5.1:2884375-2884394 | None:intergenic | 35.0% | |
| TTACCAGGATGGAAATCAAA+AGG | - | chr5.1:2885889-2885908 | None:intergenic | 35.0% | |
| TTAGACGACTCATTGAGAAA+AGG | - | chr5.1:2883361-2883380 | None:intergenic | 35.0% | |
| TTATTCGCGCATACATGAAA+TGG | + | chr5.1:2884196-2884215 | MS.gene21946:intron | 35.0% | |
| TTCTTATGAAGCAACCAATG+TGG | + | chr5.1:2882841-2882860 | MS.gene21946:CDS | 35.0% | |
| TTCTTGTTCCTGCATGAAAT+AGG | - | chr5.1:2886044-2886063 | None:intergenic | 35.0% | |
| TTGGGACTAATCATGTATAC+AGG | + | chr5.1:2885782-2885801 | MS.gene21946:intron | 35.0% | |
| TTTCTCAATGAGTCGTCTAA+CGG | + | chr5.1:2883361-2883380 | MS.gene21946:CDS | 35.0% | |
| ! | AACATCCAAGGAGATTTTAC+AGG | + | chr5.1:2886291-2886310 | MS.gene21946:CDS | 35.0% |
| ! | AACATGGCTATGAAGTTGAT+GGG | - | chr5.1:2886247-2886266 | None:intergenic | 35.0% |
| ! | ACTTTTACAGACAGACACTA+CGG | - | chr5.1:2885461-2885480 | None:intergenic | 35.0% |
| ! | AGTTTCTTGCTATGGTTTCT+GGG | + | chr5.1:2884008-2884027 | MS.gene21946:CDS | 35.0% |
| ! | ATAGGGTTCTTTGGAAAAGA+GGG | - | chr5.1:2883190-2883209 | None:intergenic | 35.0% |
| ! | GATAATTGAGGGTTTTCAAC+TGG | + | chr5.1:2884470-2884489 | MS.gene21946:intron | 35.0% |
| ! | GGTTTATCCTGTACATTTTC+AGG | + | chr5.1:2884653-2884672 | MS.gene21946:intron | 35.0% |
| !! | ATGGTTGCTTTAGAGGAAAA+AGG | - | chr5.1:2885990-2886009 | None:intergenic | 35.0% |
| !! | GCTAGAGGGTTTTGTAAAAA+TGG | + | chr5.1:2883556-2883575 | MS.gene21946:CDS | 35.0% |
| !! | TCTGCAAATGATGCTAGTTT+TGG | + | chr5.1:2883484-2883503 | MS.gene21946:CDS | 35.0% |
| !! | TTGTTGACTCTACAGAAATG+TGG | + | chr5.1:2886631-2886650 | MS.gene21946:intron | 35.0% |
| !!! | AGTTTTGGTGTTGATGAAAG+TGG | + | chr5.1:2883499-2883518 | MS.gene21946:CDS | 35.0% |
| !!! | TTCTTGTGCTTTTTCACCAA+GGG | + | chr5.1:2883282-2883301 | MS.gene21946:CDS | 35.0% |
| AAAGACCTGCATGGTTAACA+TGG | - | chr5.1:2886263-2886282 | None:intergenic | 40.0% | |
| AAATCTTCTCCTAGAGGAAC+TGG | + | chr5.1:2883100-2883119 | MS.gene21946:CDS | 40.0% | |
| AAGGATGTTGCAAAGTCTGA+AGG | + | chr5.1:2886517-2886536 | MS.gene21946:CDS | 40.0% | |
| AAGGGGAGAATCCAAATACA+CGG | + | chr5.1:2884982-2885001 | MS.gene21946:intron | 40.0% | |
| AAGTCCTTGAACTCCAAGAA+AGG | + | chr5.1:2886130-2886149 | MS.gene21946:CDS | 40.0% | |
| AATATGACTCTCACTGTCTC+CGG | - | chr5.1:2885621-2885640 | None:intergenic | 40.0% | |
| ACATTACCAGAAGGTGATGA+AGG | - | chr5.1:2883157-2883176 | None:intergenic | 40.0% | |
| AGAATCGTGGACATTTAAGC+AGG | - | chr5.1:2884897-2884916 | None:intergenic | 40.0% | |
| AGAGGAACTGGACTTAGTAA+TGG | + | chr5.1:2883112-2883131 | MS.gene21946:CDS | 40.0% | |
| AGCAGCACAGTGATAATCAA+AGG | + | chr5.1:2883788-2883807 | MS.gene21946:CDS | 40.0% | |
| ATGTACTTGTCGTACGAAAC+CGG | - | chr5.1:2883754-2883773 | None:intergenic | 40.0% | |
| CACGTGAGTCACATATGAAA+TGG | - | chr5.1:2885659-2885678 | None:intergenic | 40.0% | |
| CATGATATATGTCTCCCATG+AGG | + | chr5.1:2884625-2884644 | MS.gene21946:intron | 40.0% | |
| CATTACCAGAAGGTGATGAA+GGG | - | chr5.1:2883156-2883175 | None:intergenic | 40.0% | |
| CCATGTCTTTACTTTGCTAG+AGG | + | chr5.1:2883541-2883560 | MS.gene21946:CDS | 40.0% | |
| CCTCTAGCAAAGTAAAGACA+TGG | - | chr5.1:2883544-2883563 | None:intergenic | 40.0% | |
| CGAGTAGAATAAAGAAGCCA+AGG | - | chr5.1:2885924-2885943 | None:intergenic | 40.0% | |
| CGTGAGTCACATATGAAATG+GGG | - | chr5.1:2885657-2885676 | None:intergenic | 40.0% | |
| CTTTCTCCTGATAACATCCA+AGG | + | chr5.1:2886279-2886298 | MS.gene21946:CDS | 40.0% | |
| GACTTTAGCAAGAACCACAT+TGG | - | chr5.1:2882858-2882877 | None:intergenic | 40.0% | |
| GATTCGATTGATGCGAATTC+TGG | + | chr5.1:2883604-2883623 | MS.gene21946:CDS | 40.0% | |
| GCAAGAAACTCATTCCTTTC+GGG | - | chr5.1:2883998-2884017 | None:intergenic | 40.0% | |
| GGTAAGGAATTCTCACATCT+TGG | - | chr5.1:2885560-2885579 | None:intergenic | 40.0% | |
| GTTCCTGCATGAAATAGGTT+TGG | - | chr5.1:2886039-2886058 | None:intergenic | 40.0% | |
| GTTTGTCACCTTTGTCTTTC+CGG | + | chr5.1:2885599-2885618 | MS.gene21946:CDS | 40.0% | |
| TAAGAGGTGAAGGTGAAGAA+GGG | - | chr5.1:2883036-2883055 | None:intergenic | 40.0% | |
| TAGCAAGGTTATGAAGAACC+TGG | - | chr5.1:2882976-2882995 | None:intergenic | 40.0% | |
| TATGTTACATTTCAGAGCCG+TGG | + | chr5.1:2883916-2883935 | MS.gene21946:intron | 40.0% | |
| TCACCAAACCTATTTCATGC+AGG | + | chr5.1:2886033-2886052 | MS.gene21946:intron | 40.0% | |
| TCTTTGAATGTGCTTTCAGC+AGG | - | chr5.1:2884076-2884095 | None:intergenic | 40.0% | |
| TGAAGAGTTCATGAGGTTCA+AGG | + | chr5.1:2883669-2883688 | MS.gene21946:CDS | 40.0% | |
| TGAATCGACAACATCTGCTT+CGG | + | chr5.1:2886781-2886800 | MS.gene21946:CDS | 40.0% | |
| TGCTGAGAGTGGGAATTTAA+AGG | + | chr5.1:2886498-2886517 | MS.gene21946:CDS | 40.0% | |
| TGTGACCAAACATTACCAGA+AGG | - | chr5.1:2883166-2883185 | None:intergenic | 40.0% | |
| TGTTCCAATCCCTCAAACTT+GGG | - | chr5.1:2883646-2883665 | None:intergenic | 40.0% | |
| TTAAGAGGTGAAGGTGAAGA+AGG | - | chr5.1:2883037-2883056 | None:intergenic | 40.0% | |
| TTACTAAGTCCAGTTCCTCT+AGG | - | chr5.1:2883112-2883131 | None:intergenic | 40.0% | |
| TTGTTCCAATCCCTCAAACT+TGG | - | chr5.1:2883647-2883666 | None:intergenic | 40.0% | |
| TTTGGACTGATAGGGTTCTT+TGG | - | chr5.1:2883199-2883218 | None:intergenic | 40.0% | |
| TTTGTGAACCATAGGGTTTG+TGG | + | chr5.1:2885229-2885248 | MS.gene21946:intron | 40.0% | |
| ! | AACTTTTCCCTTCTCCTTGT+AGG | - | chr5.1:2885694-2885713 | None:intergenic | 40.0% |
| ! | AAGATGTTTCGGAGTACTTC+AGG | + | chr5.1:2884098-2884117 | MS.gene21946:CDS | 40.0% |
| ! | ACTTTTCCCTTCTCCTTGTA+GGG | - | chr5.1:2885693-2885712 | None:intergenic | 40.0% |
| ! | CAGGTTAGTCCTGTATACTA+TGG | + | chr5.1:2886310-2886329 | MS.gene21946:intron | 40.0% |
| ! | CATCACCTTCTGGTAATGTT+TGG | + | chr5.1:2883158-2883177 | MS.gene21946:CDS | 40.0% |
| ! | GAGTTTCTTGCTATGGTTTC+TGG | + | chr5.1:2884007-2884026 | MS.gene21946:CDS | 40.0% |
| ! | GATAGGGTTCTTTGGAAAAG+AGG | - | chr5.1:2883191-2883210 | None:intergenic | 40.0% |
| ! | GTTTCTTGCTATGGTTTCTG+GGG | + | chr5.1:2884009-2884028 | MS.gene21946:CDS | 40.0% |
| !! | ACATGGCTATGAAGTTGATG+GGG | - | chr5.1:2886246-2886265 | None:intergenic | 40.0% |
| !! | AGTTGATGGGGAAAAACCAA+AGG | - | chr5.1:2886234-2886253 | None:intergenic | 40.0% |
| !! | GATGAAAGTGGATTGGGATT+TGG | + | chr5.1:2883511-2883530 | MS.gene21946:CDS | 40.0% |
| !! | GGTGTTGATGAAAGTGGATT+GGG | + | chr5.1:2883505-2883524 | MS.gene21946:CDS | 40.0% |
| !! | TCTTTAGAGTCAAACGCAGA+GGG | - | chr5.1:2885865-2885884 | None:intergenic | 40.0% |
| !! | TGGTGTAGTTCTAACCAACA+TGG | + | chr5.1:2886330-2886349 | MS.gene21946:intron | 40.0% |
| !! | TGGTGTTGATGAAAGTGGAT+TGG | + | chr5.1:2883504-2883523 | MS.gene21946:CDS | 40.0% |
| !! | TGTTTGTTGTCGTTACCCTA+CGG | + | chr5.1:2885150-2885169 | MS.gene21946:intron | 40.0% |
| !! | TTCTTTAGAGTCAAACGCAG+AGG | - | chr5.1:2885866-2885885 | None:intergenic | 40.0% |
| !!! | GAACCTTTTGATTTCCATCC+TGG | + | chr5.1:2885883-2885902 | MS.gene21946:CDS | 40.0% |
| !!! | GTTCTTGTGCTTTTTCACCA+AGG | + | chr5.1:2883281-2883300 | MS.gene21946:CDS | 40.0% |
| !!! | TAATCTCCAGCTGCTTTTGT+TGG | - | chr5.1:2886689-2886708 | None:intergenic | 40.0% |
| AAAACTGAAGCAGCACGAGA+TGG | - | chr5.1:2886009-2886028 | None:intergenic | 45.0% | |
| AACGCAGAGGGACTTAAACA+TGG | - | chr5.1:2885853-2885872 | None:intergenic | 45.0% | |
| AAGAGGTGAAGGTGAAGAAG+GGG | - | chr5.1:2883035-2883054 | None:intergenic | 45.0% | |
| AAGCAAAGAGACTGTCAGGA+AGG | - | chr5.1:2886664-2886683 | None:intergenic | 45.0% | |
| AAGGTGAAGAAGGGGTAGAT+AGG | - | chr5.1:2883027-2883046 | None:intergenic | 45.0% | |
| AGCAAAGAGACTGTCAGGAA+GGG | - | chr5.1:2886663-2886682 | None:intergenic | 45.0% | |
| AGCAATACTATGACTGCCGT+AGG | - | chr5.1:2885169-2885188 | None:intergenic | 45.0% | |
| AGGATAAACCTGTCTCCTCA+TGG | - | chr5.1:2884643-2884662 | None:intergenic | 45.0% | |
| AGGTTATGAAGAACCTGGTC+AGG | - | chr5.1:2882971-2882990 | None:intergenic | 45.0% | |
| ATCAGCAGCAGCAATTTGAG+AGG | + | chr5.1:2885815-2885834 | MS.gene21946:CDS | 45.0% | |
| ATTGATGCGAATTCTGGTGC+TGG | + | chr5.1:2883610-2883629 | MS.gene21946:CDS | 45.0% | |
| CAAATTGCTGCTGCTGATGT+TGG | - | chr5.1:2885813-2885832 | None:intergenic | 45.0% | |
| CACAGGCAAAACCACTTTCA+TGG | - | chr5.1:2884326-2884345 | None:intergenic | 45.0% | |
| CATAGCCATGTTAACCATGC+AGG | + | chr5.1:2886255-2886274 | MS.gene21946:CDS | 45.0% | |
| CCAATAGGGTTAAGAGGTGA+AGG | - | chr5.1:2883046-2883065 | None:intergenic | 45.0% | |
| CCTTCACCTCTTAACCCTAT+TGG | + | chr5.1:2883043-2883062 | MS.gene21946:CDS | 45.0% | |
| CTAAAGAACCAGCAGAAGTG+AGG | - | chr5.1:2886408-2886427 | None:intergenic | 45.0% | |
| GAATCGACAACATCTGCTTC+GGG | + | chr5.1:2886782-2886801 | MS.gene21946:CDS | 45.0% | |
| GAATGTGCTTTCAGCAGGAA+AGG | - | chr5.1:2884071-2884090 | None:intergenic | 45.0% | |
| GCAATACTATGACTGCCGTA+GGG | - | chr5.1:2885168-2885187 | None:intergenic | 45.0% | |
| GGAATTCTCACATCTTGGAC+AGG | - | chr5.1:2885555-2885574 | None:intergenic | 45.0% | |
| GGATAAACCTGTCTCCTCAT+GGG | - | chr5.1:2884642-2884661 | None:intergenic | 45.0% | |
| GGGTCTTTACCCTAATAGCA+AGG | - | chr5.1:2882991-2883010 | None:intergenic | 45.0% | |
| GTACTCTCATTAGCCACTTC+CGG | - | chr5.1:2886731-2886750 | None:intergenic | 45.0% | |
| GTAGCAGCATCAATGCAAGA+TGG | - | chr5.1:2886472-2886491 | None:intergenic | 45.0% | |
| GTGAAACCCTACAAGGAGAA+GGG | + | chr5.1:2885684-2885703 | MS.gene21946:CDS | 45.0% | |
| GTTGATCCGCGTCTTGAAAT+GGG | + | chr5.1:2883394-2883413 | MS.gene21946:CDS | 45.0% | |
| TATCAGGAGAAAGACCTGCA+TGG | - | chr5.1:2886272-2886291 | None:intergenic | 45.0% | |
| TCAGCAGCAGCAATTTGAGA+GGG | + | chr5.1:2885816-2885835 | MS.gene21946:CDS | 45.0% | |
| TCAGCAGCATCAAAGAATGG+TGG | + | chr5.1:2883696-2883715 | MS.gene21946:CDS | 45.0% | |
| TCCTTGAACTCCAAGAAAGG+AGG | + | chr5.1:2886133-2886152 | MS.gene21946:CDS | 45.0% | |
| TGCTCAGCAGCATCAAAGAA+TGG | + | chr5.1:2883693-2883712 | MS.gene21946:CDS | 45.0% | |
| TGTGAAACCCTACAAGGAGA+AGG | + | chr5.1:2885683-2885702 | MS.gene21946:CDS | 45.0% | |
| TGTGCTTGTGAAACCCTACA+AGG | + | chr5.1:2885677-2885696 | MS.gene21946:CDS | 45.0% | |
| TTCACCCAAGTTTGAGGGAT+TGG | + | chr5.1:2883639-2883658 | MS.gene21946:CDS | 45.0% | |
| TTTAGCATGTTGTCCTGACC+AGG | + | chr5.1:2882955-2882974 | MS.gene21946:CDS | 45.0% | |
| ! | AACATGCGCTTTTGCTGGTA+AGG | - | chr5.1:2885576-2885595 | None:intergenic | 45.0% |
| ! | AAGTCTGAAGGCGTAGATCT+CGG | + | chr5.1:2886529-2886548 | MS.gene21946:CDS | 45.0% |
| ! | ACCAGCAAAAGCGCATGTTT+GGG | + | chr5.1:2885577-2885596 | MS.gene21946:CDS | 45.0% |
| ! | GTTGGTTCACCCAAGTTTGA+GGG | + | chr5.1:2883634-2883653 | MS.gene21946:CDS | 45.0% |
| ! | TACCAGCAAAAGCGCATGTT+TGG | + | chr5.1:2885576-2885595 | MS.gene21946:CDS | 45.0% |
| !! | AATATCCAAGGTGCTGTTGG+TGG | + | chr5.1:2883244-2883263 | MS.gene21946:CDS | 45.0% |
| !! | CTCACTTCTGCTGGTTCTTT+AGG | + | chr5.1:2886406-2886425 | MS.gene21946:CDS | 45.0% |
| !! | GAGAATATCCAAGGTGCTGT+TGG | + | chr5.1:2883241-2883260 | MS.gene21946:CDS | 45.0% |
| !! | TCTCTTTAAAGCGTGGAACC+TGG | - | chr5.1:2884265-2884284 | None:intergenic | 45.0% |
| !! | TGTTGGTTCACCCAAGTTTG+AGG | + | chr5.1:2883633-2883652 | MS.gene21946:CDS | 45.0% |
| !! | TTCCAAGAAGCATCAGACCA+GGG | - | chr5.1:2884351-2884370 | None:intergenic | 45.0% |
| AGGAACCCTTCATCACCTTC+TGG | + | chr5.1:2883148-2883167 | MS.gene21946:CDS | 50.0% | |
| ATCTGCTTCGGGTGACAACA+TGG | + | chr5.1:2886793-2886812 | MS.gene21946:CDS | 50.0% | |
| CACTGTCTCCGGAAAGACAA+AGG | - | chr5.1:2885610-2885629 | None:intergenic | 50.0% | |
| CACTGTGCACACCATGAAAG+TGG | + | chr5.1:2884312-2884331 | MS.gene21946:intron | 50.0% | |
| CAGCAGCAGCAATTTGAGAG+GGG | + | chr5.1:2885817-2885836 | MS.gene21946:CDS | 50.0% | |
| CTTTCCATTGCAGGCTACAG+TGG | + | chr5.1:2886379-2886398 | MS.gene21946:intron | 50.0% | |
| GACTCTTCAGCCTCCTTTCT+TGG | - | chr5.1:2886146-2886165 | None:intergenic | 50.0% | |
| GAGAAGGAAAATGGAGGAGC+AGG | + | chr5.1:2886092-2886111 | MS.gene21946:CDS | 50.0% | |
| GATGCTTCTTGGAAGCCCTA+GGG | + | chr5.1:2884357-2884376 | MS.gene21946:intron | 50.0% | |
| GCCTCCTTTCTTGGAGTTCA+AGG | - | chr5.1:2886137-2886156 | None:intergenic | 50.0% | |
| GCTTCACCAACAAAAGCAGC+TGG | + | chr5.1:2886680-2886699 | MS.gene21946:CDS | 50.0% | |
| GGAGTCAGGATCAACATCAG+AGG | - | chr5.1:2884401-2884420 | None:intergenic | 50.0% | |
| GGTGAAGCAAAGAGACTGTC+AGG | - | chr5.1:2886668-2886687 | None:intergenic | 50.0% | |
| GGTGGTCAGAATTGGATCTC+TGG | + | chr5.1:2883421-2883440 | MS.gene21946:CDS | 50.0% | |
| GGTGTGCACAGTGAAAATCG+TGG | - | chr5.1:2884305-2884324 | None:intergenic | 50.0% | |
| GGTTGATCCGCGTCTTGAAA+TGG | + | chr5.1:2883393-2883412 | MS.gene21946:CDS | 50.0% | |
| GTCGTCTAACGGCGATGATT+TGG | + | chr5.1:2883372-2883391 | MS.gene21946:CDS | 50.0% | |
| TATGTCTCCCATGAGGAGAC+AGG | + | chr5.1:2884632-2884651 | MS.gene21946:intron | 50.0% | |
| TCCGGTGGAGAGAAATCAGA+CGG | - | chr5.1:2886713-2886732 | None:intergenic | 50.0% | |
| TCCGTCTGATTTCTCTCCAC+CGG | + | chr5.1:2886709-2886728 | MS.gene21946:CDS | 50.0% | |
| TGATGCTTCTTGGAAGCCCT+AGG | + | chr5.1:2884356-2884375 | MS.gene21946:intron | 50.0% | |
| TGATTTCTCTCCACCGGAAG+TGG | + | chr5.1:2886715-2886734 | MS.gene21946:CDS | 50.0% | |
| ! | ACCCAAACATGCGCTTTTGC+TGG | - | chr5.1:2885581-2885600 | None:intergenic | 50.0% |
| ! | GCACGAGATGGTTGCTTTAG+AGG | - | chr5.1:2885997-2886016 | None:intergenic | 50.0% |
| ! | TCTCTCTGTTGGTGCTCCTT+TGG | + | chr5.1:2886215-2886234 | MS.gene21946:CDS | 50.0% |
| ! | TTCTGGGGACAAGCCTAACT+CGG | + | chr5.1:2884024-2884043 | MS.gene21946:CDS | 50.0% |
| !! | ACGACTTGCTAATGCTGTGC+AGG | + | chr5.1:2884136-2884155 | MS.gene21946:intron | 50.0% |
| !! | CTTCCAAGAAGCATCAGACC+AGG | - | chr5.1:2884352-2884371 | None:intergenic | 50.0% |
| AAGGCGTAGATCTCGGCATG+GGG | + | chr5.1:2886536-2886555 | MS.gene21946:CDS | 55.0% | |
| ACAAGCCTAACTCGGCTTCG+CGG | + | chr5.1:2884032-2884051 | MS.gene21946:CDS | 55.0% | |
| ACATTTCAGAGCCGTGGCTG+CGG | + | chr5.1:2883922-2883941 | MS.gene21946:intron | 55.0% | |
| CCAACGCCCATTTCAAGACG+CGG | - | chr5.1:2883403-2883422 | None:intergenic | 55.0% | |
| CTACTGCTGCTGCTGAGAGT+GGG | + | chr5.1:2886488-2886507 | MS.gene21946:CDS | 55.0% | |
| CTCCCTGGTCTGATGCTTCT+TGG | + | chr5.1:2884346-2884365 | MS.gene21946:intron | 55.0% | |
| CTCTCATTAGCCACTTCCGG+TGG | - | chr5.1:2886728-2886747 | None:intergenic | 55.0% | |
| CTTGGAAGCCCTAGGGAAGA+TGG | + | chr5.1:2884364-2884383 | MS.gene21946:intron | 55.0% | |
| GATGTGCACGTGCAGAATCG+TGG | - | chr5.1:2884910-2884929 | None:intergenic | 55.0% | |
| TAGGGTTTGTGGCCCTCAGA+AGG | + | chr5.1:2885240-2885259 | MS.gene21946:intron | 55.0% | |
| TCAACATTACTGGTCGGGGC+AGG | + | chr5.1:2883972-2883991 | MS.gene21946:CDS | 55.0% | |
| TCTGAGGGCCACAAACCCTA+TGG | - | chr5.1:2885240-2885259 | None:intergenic | 55.0% | |
| TGCTGCTGGTGGAACATCAC+CGG | + | chr5.1:2883732-2883751 | MS.gene21946:CDS | 55.0% | |
| ! | GAAGGCGTAGATCTCGGCAT+GGG | + | chr5.1:2886535-2886554 | MS.gene21946:CDS | 55.0% |
| ! | TGAAGGCGTAGATCTCGGCA+TGG | + | chr5.1:2886534-2886553 | MS.gene21946:CDS | 55.0% |
| !! | CGTCTTGAAATGGGCGTTGG+TGG | + | chr5.1:2883403-2883422 | MS.gene21946:CDS | 55.0% |
| !! | GCATCACAACTTGCTGCTGG+TGG | + | chr5.1:2883721-2883740 | MS.gene21946:CDS | 55.0% |
| !! | GCGAATTCTGGTGCTGGTGT+TGG | + | chr5.1:2883616-2883635 | MS.gene21946:CDS | 55.0% |
| !! | GCTGCATCACAACTTGCTGC+TGG | + | chr5.1:2883718-2883737 | MS.gene21946:CDS | 55.0% |
| !! | TGGGCGTTGGTGGTCAGAAT+TGG | + | chr5.1:2883413-2883432 | MS.gene21946:CDS | 55.0% |
| AGTGGCAGCCTCACTTCTGC+TGG | + | chr5.1:2886397-2886416 | MS.gene21946:CDS | 60.0% | |
| ATCTGCCGCGAAGCCGAGTT+AGG | - | chr5.1:2884040-2884059 | None:intergenic | 60.0% | |
| CAACAGAGAGACTGCGCTGG+TGG | - | chr5.1:2886206-2886225 | None:intergenic | 60.0% | |
| CACCAACAGAGAGACTGCGC+TGG | - | chr5.1:2886209-2886228 | None:intergenic | 60.0% | |
| CACCAGCGCAGTCTCTCTGT+TGG | + | chr5.1:2886204-2886223 | MS.gene21946:CDS | 60.0% | |
| CACTGCCACCAACAGCACCT+TGG | - | chr5.1:2883252-2883271 | None:intergenic | 60.0% | |
| CCGCGTCTTGAAATGGGCGT+TGG | + | chr5.1:2883400-2883419 | MS.gene21946:CDS | 60.0% | |
| GCTACTGCTGCTGCTGAGAG+TGG | + | chr5.1:2886487-2886506 | MS.gene21946:CDS | 60.0% | |
| GCTGCCACTGTAGCCTGCAA+TGG | - | chr5.1:2886386-2886405 | None:intergenic | 60.0% | |
| GCTGCGGCAGCATTTGCGAT+GGG | + | chr5.1:2883938-2883957 | MS.gene21946:CDS | 60.0% | |
| ! | AGCATCAGACCAGGGAGCAC+AGG | - | chr5.1:2884343-2884362 | None:intergenic | 60.0% |
| ! | AGGTGCTGCATCTGAGCAGC+AGG | + | chr5.1:2886426-2886445 | MS.gene21946:CDS | 60.0% |
| !! | CAAGGTGCTGTTGGTGGCAG+TGG | + | chr5.1:2883250-2883269 | MS.gene21946:CDS | 60.0% |
| !! | CTGCGCTGGTGGTGGTGAAT+CGG | - | chr5.1:2886195-2886214 | None:intergenic | 60.0% |
| !! | GTGGTTTTGCCTGTGCTCCC+TGG | + | chr5.1:2884331-2884350 | MS.gene21946:intron | 60.0% |
| CGCAAATGCTGCCGCAGCCA+CGG | - | chr5.1:2883936-2883955 | None:intergenic | 65.0% | |
| GGCTGCGGCAGCATTTGCGA+TGG | + | chr5.1:2883937-2883956 | MS.gene21946:CDS | 65.0% | |
| ! | CAGAGAGACTGCGCTGGTGG+TGG | - | chr5.1:2886203-2886222 | None:intergenic | 65.0% |
| !! | GCTGTTGGTGGCAGTGGTGC+TGG | + | chr5.1:2883256-2883275 | MS.gene21946:CDS | 65.0% |
| !! | GTTGGTGGCAGTGGTGCTGG+TGG | + | chr5.1:2883259-2883278 | MS.gene21946:CDS | 65.0% |
| CTGGTCGGGGCAGGCCCGAA+AGG | + | chr5.1:2883981-2884000 | MS.gene21946:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 2882836 | 2886826 | 2882836 | ID=MS.gene21946 |
| chr5.1 | mRNA | 2882836 | 2886826 | 2882836 | ID=MS.gene21946.t1;Parent=MS.gene21946 |
| chr5.1 | exon | 2882836 | 2883809 | 2882836 | ID=MS.gene21946.t1.exon1;Parent=MS.gene21946.t1 |
| chr5.1 | CDS | 2882836 | 2883809 | 2882836 | ID=cds.MS.gene21946.t1;Parent=MS.gene21946.t1 |
| chr5.1 | exon | 2883931 | 2884119 | 2883931 | ID=MS.gene21946.t1.exon2;Parent=MS.gene21946.t1 |
| chr5.1 | CDS | 2883931 | 2884119 | 2883931 | ID=cds.MS.gene21946.t1;Parent=MS.gene21946.t1 |
| chr5.1 | exon | 2885542 | 2885721 | 2885542 | ID=MS.gene21946.t1.exon3;Parent=MS.gene21946.t1 |
| chr5.1 | CDS | 2885542 | 2885721 | 2885542 | ID=cds.MS.gene21946.t1;Parent=MS.gene21946.t1 |
| chr5.1 | exon | 2885804 | 2885904 | 2885804 | ID=MS.gene21946.t1.exon4;Parent=MS.gene21946.t1 |
| chr5.1 | CDS | 2885804 | 2885904 | 2885804 | ID=cds.MS.gene21946.t1;Parent=MS.gene21946.t1 |
| chr5.1 | exon | 2886055 | 2886312 | 2886055 | ID=MS.gene21946.t1.exon5;Parent=MS.gene21946.t1 |
| chr5.1 | CDS | 2886055 | 2886312 | 2886055 | ID=cds.MS.gene21946.t1;Parent=MS.gene21946.t1 |
| chr5.1 | exon | 2886392 | 2886557 | 2886392 | ID=MS.gene21946.t1.exon6;Parent=MS.gene21946.t1 |
| chr5.1 | CDS | 2886392 | 2886557 | 2886392 | ID=cds.MS.gene21946.t1;Parent=MS.gene21946.t1 |
| chr5.1 | exon | 2886646 | 2886826 | 2886646 | ID=MS.gene21946.t1.exon7;Parent=MS.gene21946.t1 |
| chr5.1 | CDS | 2886646 | 2886826 | 2886646 | ID=cds.MS.gene21946.t1;Parent=MS.gene21946.t1 |
| Gene Sequence |
| Protein sequence |
