Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22124.t1 | XP_013459546.1 | 93.8 | 371 | 23 | 0 | 1 | 371 | 1 | 371 | 4.50E-204 | 720.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22124.t1 | Q9FJ45 | 44.9 | 374 | 190 | 9 | 1 | 362 | 1 | 370 | 1.4e-81 | 304.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22124.t1 | A0A072UVC7 | 93.8 | 371 | 23 | 0 | 1 | 371 | 1 | 371 | 3.3e-204 | 720.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004228 | MS.gene22124 | PPI |
| MS.gene54327 | MS.gene22124 | PPI |
| MS.gene01536 | MS.gene22124 | PPI |
| MS.gene01537 | MS.gene22124 | PPI |
| MS.gene22124 | MS.gene002554 | PPI |
| MS.gene002553 | MS.gene22124 | PPI |
| MS.gene004227 | MS.gene22124 | PPI |
| MS.gene01535 | MS.gene22124 | PPI |
| MS.gene22124 | MS.gene002555 | PPI |
| MS.gene22124 | MS.gene004229 | PPI |
| MS.gene54325 | MS.gene22124 | PPI |
| MS.gene22124 | MS.gene54326 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22124.t1 | MTR_3g448360 | 93.801 | 371 | 23 | 0 | 1 | 371 | 1 | 371 | 0.0 | 723 |
| MS.gene22124.t1 | MTR_3g069780 | 80.161 | 373 | 70 | 3 | 1 | 371 | 1 | 371 | 0.0 | 602 |
| MS.gene22124.t1 | MTR_3g438030 | 79.625 | 373 | 72 | 3 | 1 | 371 | 1 | 371 | 0.0 | 599 |
| MS.gene22124.t1 | MTR_3g069520 | 77.688 | 372 | 79 | 3 | 1 | 371 | 1 | 369 | 0.0 | 584 |
| MS.gene22124.t1 | MTR_3g463960 | 66.925 | 387 | 110 | 5 | 1 | 370 | 2 | 387 | 0.0 | 519 |
| MS.gene22124.t1 | MTR_3g463950 | 66.925 | 387 | 110 | 5 | 1 | 370 | 2 | 387 | 0.0 | 519 |
| MS.gene22124.t1 | MTR_3g463970 | 66.925 | 387 | 110 | 5 | 1 | 370 | 2 | 387 | 0.0 | 519 |
| MS.gene22124.t1 | MTR_3g463940 | 66.925 | 387 | 110 | 5 | 1 | 370 | 2 | 387 | 0.0 | 519 |
| MS.gene22124.t1 | MTR_2g079090 | 68.817 | 372 | 100 | 6 | 1 | 370 | 1 | 358 | 1.16e-178 | 500 |
| MS.gene22124.t1 | MTR_3g463930 | 64.810 | 395 | 112 | 7 | 1 | 370 | 2 | 394 | 1.31e-177 | 499 |
| MS.gene22124.t1 | MTR_0029s0050 | 68.548 | 372 | 101 | 6 | 1 | 370 | 1 | 358 | 1.42e-176 | 495 |
| MS.gene22124.t1 | MTR_2g079080 | 67.742 | 372 | 104 | 6 | 1 | 370 | 1 | 358 | 1.12e-175 | 493 |
| MS.gene22124.t1 | MTR_0029s0100 | 68.011 | 372 | 103 | 6 | 1 | 370 | 1 | 358 | 2.15e-174 | 489 |
| MS.gene22124.t1 | MTR_2g043980 | 60.590 | 373 | 127 | 6 | 1 | 371 | 7 | 361 | 1.31e-152 | 434 |
| MS.gene22124.t1 | MTR_2g015650 | 51.467 | 375 | 168 | 7 | 5 | 371 | 6 | 374 | 1.06e-125 | 367 |
| MS.gene22124.t1 | MTR_2g015670 | 50.556 | 360 | 155 | 8 | 17 | 371 | 19 | 360 | 4.70e-114 | 336 |
| MS.gene22124.t1 | MTR_2g015630 | 48.673 | 339 | 159 | 7 | 34 | 363 | 36 | 368 | 7.95e-102 | 306 |
| MS.gene22124.t1 | MTR_2g015580 | 44.173 | 369 | 185 | 7 | 10 | 364 | 22 | 383 | 3.37e-100 | 302 |
| MS.gene22124.t1 | MTR_2g043990 | 53.741 | 294 | 109 | 5 | 1 | 292 | 69 | 337 | 9.15e-98 | 294 |
| MS.gene22124.t1 | MTR_2g015590 | 44.575 | 341 | 179 | 5 | 27 | 361 | 29 | 365 | 3.84e-93 | 283 |
| MS.gene22124.t1 | MTR_3g466240 | 59.729 | 221 | 58 | 2 | 102 | 319 | 2 | 194 | 3.59e-82 | 249 |
| MS.gene22124.t1 | MTR_2g015590 | 44.853 | 272 | 144 | 3 | 27 | 293 | 29 | 299 | 5.16e-71 | 226 |
| MS.gene22124.t1 | MTR_4g104240 | 36.240 | 367 | 207 | 13 | 5 | 361 | 18 | 367 | 3.89e-63 | 206 |
| MS.gene22124.t1 | MTR_3g466190 | 60.571 | 175 | 44 | 4 | 56 | 226 | 7 | 160 | 3.23e-60 | 194 |
| MS.gene22124.t1 | MTR_3g466190 | 78.205 | 78 | 17 | 0 | 294 | 371 | 152 | 229 | 3.24e-35 | 129 |
| MS.gene22124.t1 | MTR_7g087190 | 33.770 | 382 | 198 | 16 | 19 | 370 | 33 | 389 | 1.25e-51 | 177 |
| MS.gene22124.t1 | MTR_1g030220 | 35.294 | 357 | 195 | 11 | 27 | 363 | 38 | 378 | 9.59e-49 | 169 |
| MS.gene22124.t1 | MTR_8g028160 | 34.626 | 361 | 208 | 12 | 18 | 361 | 25 | 374 | 1.98e-47 | 166 |
| MS.gene22124.t1 | MTR_6g007090 | 31.759 | 381 | 223 | 10 | 1 | 361 | 7 | 370 | 2.43e-46 | 162 |
| MS.gene22124.t1 | MTR_7g116870 | 33.241 | 361 | 204 | 13 | 27 | 369 | 31 | 372 | 1.71e-45 | 160 |
| MS.gene22124.t1 | MTR_1g030268 | 34.831 | 356 | 196 | 13 | 27 | 363 | 38 | 376 | 2.00e-45 | 160 |
| MS.gene22124.t1 | MTR_8g089805 | 32.283 | 381 | 207 | 15 | 15 | 363 | 20 | 381 | 4.92e-45 | 159 |
| MS.gene22124.t1 | MTR_1g030340 | 32.908 | 392 | 214 | 15 | 4 | 370 | 18 | 385 | 5.58e-45 | 159 |
| MS.gene22124.t1 | MTR_7g111780 | 34.985 | 343 | 195 | 13 | 29 | 363 | 36 | 358 | 1.58e-44 | 157 |
| MS.gene22124.t1 | MTR_7g033165 | 34.174 | 357 | 198 | 12 | 27 | 362 | 31 | 371 | 1.84e-44 | 157 |
| MS.gene22124.t1 | MTR_1g030275 | 34.746 | 354 | 191 | 13 | 27 | 357 | 37 | 373 | 2.34e-42 | 152 |
| MS.gene22124.t1 | MTR_1g030230 | 32.877 | 365 | 209 | 12 | 19 | 363 | 22 | 370 | 1.24e-40 | 147 |
| MS.gene22124.t1 | MTR_7g113860 | 31.452 | 372 | 202 | 15 | 19 | 361 | 25 | 372 | 2.14e-40 | 147 |
| MS.gene22124.t1 | MTR_7g113860 | 32.086 | 374 | 205 | 15 | 15 | 361 | 15 | 366 | 1.39e-39 | 144 |
| MS.gene22124.t1 | MTR_7g033150 | 31.841 | 402 | 217 | 16 | 1 | 366 | 1 | 381 | 2.29e-39 | 144 |
| MS.gene22124.t1 | MTR_6g007095 | 30.769 | 390 | 226 | 11 | 1 | 367 | 7 | 375 | 8.14e-39 | 147 |
| MS.gene22124.t1 | MTR_6g007095 | 28.375 | 363 | 211 | 11 | 22 | 363 | 356 | 690 | 4.70e-26 | 110 |
| MS.gene22124.t1 | MTR_7g033155 | 32.041 | 387 | 201 | 15 | 21 | 366 | 30 | 395 | 7.36e-38 | 140 |
| MS.gene22124.t1 | MTR_1g082390 | 29.973 | 377 | 228 | 14 | 5 | 364 | 13 | 370 | 1.07e-35 | 134 |
| MS.gene22124.t1 | MTR_1g030268 | 35.252 | 278 | 157 | 9 | 27 | 293 | 38 | 303 | 1.72e-35 | 132 |
| MS.gene22124.t1 | MTR_8g031420 | 29.919 | 371 | 216 | 14 | 2 | 356 | 5 | 347 | 1.11e-32 | 125 |
| MS.gene22124.t1 | MTR_8g031390 | 29.240 | 342 | 208 | 14 | 24 | 356 | 32 | 348 | 2.30e-32 | 125 |
| MS.gene22124.t1 | MTR_7g033165 | 35.606 | 264 | 151 | 8 | 27 | 279 | 31 | 286 | 2.83e-32 | 123 |
| MS.gene22124.t1 | MTR_8g031430 | 29.885 | 348 | 199 | 15 | 24 | 356 | 32 | 349 | 6.54e-32 | 124 |
| MS.gene22124.t1 | MTR_8g038680 | 28.691 | 359 | 212 | 12 | 27 | 361 | 26 | 364 | 1.71e-31 | 122 |
| MS.gene22124.t1 | MTR_8g031400 | 30.347 | 346 | 200 | 13 | 24 | 356 | 32 | 349 | 6.42e-31 | 121 |
| MS.gene22124.t1 | MTR_6g007100 | 30.233 | 387 | 213 | 18 | 1 | 367 | 7 | 356 | 1.13e-30 | 120 |
| MS.gene22124.t1 | MTR_8g022810 | 30.508 | 354 | 193 | 16 | 28 | 360 | 40 | 361 | 1.16e-30 | 120 |
| MS.gene22124.t1 | MTR_7g111780 | 33.582 | 268 | 154 | 10 | 103 | 363 | 9 | 259 | 1.57e-29 | 115 |
| MS.gene22124.t1 | MTR_4g056160 | 29.970 | 337 | 206 | 11 | 29 | 354 | 27 | 344 | 3.36e-28 | 113 |
| MS.gene22124.t1 | MTR_4g056280 | 29.839 | 372 | 224 | 13 | 1 | 363 | 8 | 351 | 1.84e-27 | 111 |
| MS.gene22124.t1 | MTR_8g031390 | 29.492 | 295 | 179 | 12 | 24 | 313 | 32 | 302 | 3.11e-27 | 110 |
| MS.gene22124.t1 | MTR_1g025780 | 28.533 | 368 | 222 | 16 | 1 | 355 | 15 | 354 | 7.00e-27 | 110 |
| MS.gene22124.t1 | MTR_8g014910 | 29.296 | 355 | 211 | 13 | 15 | 354 | 18 | 347 | 5.86e-26 | 107 |
| MS.gene22124.t1 | MTR_2g033930 | 27.763 | 371 | 234 | 11 | 1 | 362 | 8 | 353 | 1.29e-25 | 106 |
| MS.gene22124.t1 | MTR_1g025680 | 30.145 | 345 | 194 | 15 | 29 | 355 | 34 | 349 | 1.89e-25 | 107 |
| MS.gene22124.t1 | MTR_2g044100 | 27.614 | 373 | 223 | 14 | 3 | 356 | 17 | 361 | 2.01e-25 | 106 |
| MS.gene22124.t1 | MTR_1g030265 | 31.353 | 303 | 170 | 12 | 79 | 357 | 53 | 341 | 6.87e-25 | 104 |
| MS.gene22124.t1 | MTR_2g100620 | 27.219 | 338 | 212 | 11 | 29 | 354 | 31 | 346 | 1.64e-24 | 103 |
| MS.gene22124.t1 | MTR_2g015080 | 27.717 | 368 | 218 | 16 | 3 | 349 | 16 | 356 | 2.44e-24 | 103 |
| MS.gene22124.t1 | MTR_8g089805 | 28.289 | 304 | 179 | 12 | 84 | 363 | 25 | 313 | 2.47e-24 | 102 |
| MS.gene22124.t1 | MTR_3g052490 | 28.495 | 372 | 219 | 16 | 3 | 358 | 12 | 352 | 5.24e-24 | 102 |
| MS.gene22124.t1 | MTR_1g025720 | 29.526 | 359 | 208 | 16 | 3 | 347 | 16 | 343 | 3.25e-23 | 99.8 |
| MS.gene22124.t1 | MTR_5g078210 | 27.164 | 335 | 199 | 13 | 33 | 351 | 29 | 334 | 5.13e-23 | 99.0 |
| MS.gene22124.t1 | MTR_5g022630 | 29.345 | 351 | 211 | 13 | 9 | 346 | 25 | 351 | 7.13e-23 | 99.0 |
| MS.gene22124.t1 | MTR_8g079050 | 28.647 | 377 | 215 | 17 | 3 | 356 | 15 | 360 | 1.11e-22 | 98.6 |
| MS.gene22124.t1 | MTR_1g025700 | 29.178 | 353 | 209 | 15 | 16 | 355 | 40 | 364 | 1.87e-22 | 97.8 |
| MS.gene22124.t1 | MTR_3g098270 | 27.968 | 379 | 224 | 18 | 1 | 357 | 3 | 354 | 2.37e-22 | 97.4 |
| MS.gene22124.t1 | MTR_8g012540 | 28.383 | 303 | 196 | 9 | 27 | 320 | 26 | 316 | 3.49e-22 | 96.7 |
| MS.gene22124.t1 | MTR_7g113860 | 28.296 | 311 | 177 | 13 | 77 | 361 | 8 | 298 | 1.26e-21 | 94.4 |
| MS.gene22124.t1 | MTR_2g033920 | 29.213 | 356 | 200 | 14 | 28 | 362 | 34 | 358 | 1.30e-21 | 95.1 |
| MS.gene22124.t1 | MTR_5g009100 | 26.844 | 339 | 217 | 12 | 31 | 359 | 48 | 365 | 1.95e-21 | 95.1 |
| MS.gene22124.t1 | MTR_4g035353 | 26.124 | 356 | 224 | 14 | 16 | 357 | 18 | 348 | 3.74e-21 | 94.0 |
| MS.gene22124.t1 | MTR_1g025760 | 29.118 | 340 | 204 | 14 | 29 | 355 | 80 | 395 | 4.08e-21 | 94.4 |
| MS.gene22124.t1 | MTR_5g078210 | 27.327 | 333 | 185 | 12 | 33 | 351 | 29 | 318 | 5.54e-21 | 92.8 |
| MS.gene22124.t1 | MTR_5g074270 | 28.487 | 337 | 208 | 14 | 27 | 351 | 31 | 346 | 6.09e-21 | 93.2 |
| MS.gene22124.t1 | MTR_3g435540 | 27.348 | 362 | 213 | 13 | 31 | 367 | 25 | 361 | 8.36e-21 | 92.8 |
| MS.gene22124.t1 | MTR_4g108690 | 26.979 | 341 | 206 | 13 | 31 | 355 | 29 | 342 | 8.38e-21 | 92.8 |
| MS.gene22124.t1 | MTR_3g052580 | 27.763 | 371 | 221 | 17 | 3 | 358 | 9 | 347 | 1.67e-20 | 92.4 |
| MS.gene22124.t1 | MTR_3g052580 | 27.763 | 371 | 221 | 17 | 3 | 358 | 8 | 346 | 2.60e-20 | 92.0 |
| MS.gene22124.t1 | MTR_8g022790 | 25.073 | 343 | 218 | 9 | 24 | 356 | 32 | 345 | 3.25e-20 | 91.3 |
| MS.gene22124.t1 | MTR_5g084750 | 27.327 | 333 | 195 | 14 | 29 | 343 | 30 | 333 | 4.30e-20 | 90.5 |
| MS.gene22124.t1 | MTR_3g082830 | 27.429 | 350 | 205 | 14 | 29 | 359 | 38 | 357 | 5.01e-20 | 90.5 |
| MS.gene22124.t1 | MTR_5g084770 | 27.882 | 373 | 215 | 16 | 3 | 354 | 4 | 343 | 6.89e-20 | 90.1 |
| MS.gene22124.t1 | MTR_5g084790 | 29.226 | 349 | 192 | 17 | 29 | 355 | 32 | 347 | 8.54e-20 | 89.7 |
| MS.gene22124.t1 | MTR_4g087985 | 27.966 | 354 | 206 | 15 | 29 | 356 | 36 | 366 | 1.12e-19 | 89.7 |
| MS.gene22124.t1 | MTR_3g464730 | 26.273 | 373 | 227 | 14 | 1 | 355 | 2 | 344 | 1.80e-19 | 89.0 |
| MS.gene22124.t1 | MTR_5g093090 | 26.790 | 377 | 223 | 16 | 4 | 362 | 11 | 352 | 4.50e-19 | 87.8 |
| MS.gene22124.t1 | MTR_5g083040 | 28.190 | 337 | 213 | 13 | 29 | 353 | 32 | 351 | 4.85e-19 | 87.8 |
| MS.gene22124.t1 | MTR_3g114090 | 29.023 | 348 | 198 | 18 | 27 | 355 | 34 | 351 | 5.14e-19 | 87.8 |
| MS.gene22124.t1 | MTR_0009s0250 | 26.899 | 316 | 191 | 11 | 4 | 306 | 5 | 293 | 7.31e-19 | 87.0 |
| MS.gene22124.t1 | MTR_5g022640 | 27.945 | 365 | 226 | 14 | 6 | 355 | 17 | 359 | 9.45e-19 | 87.0 |
| MS.gene22124.t1 | MTR_3g005650 | 27.576 | 330 | 197 | 15 | 29 | 345 | 30 | 330 | 1.24e-18 | 86.7 |
| MS.gene22124.t1 | MTR_4g122200 | 28.238 | 386 | 215 | 19 | 1 | 365 | 15 | 359 | 5.67e-18 | 84.7 |
| MS.gene22124.t1 | MTR_1g060490 | 24.260 | 338 | 213 | 11 | 26 | 353 | 34 | 338 | 2.26e-17 | 82.8 |
| MS.gene22124.t1 | MTR_1g092750 | 25.152 | 330 | 205 | 11 | 30 | 349 | 41 | 338 | 2.96e-17 | 82.4 |
| MS.gene22124.t1 | MTR_1g060500 | 25.073 | 343 | 212 | 14 | 26 | 353 | 37 | 349 | 4.46e-17 | 82.0 |
| MS.gene22124.t1 | MTR_2g084585 | 26.190 | 336 | 217 | 11 | 29 | 354 | 30 | 344 | 7.76e-17 | 81.3 |
| MS.gene22124.t1 | MTR_8g022810 | 33.816 | 207 | 109 | 10 | 28 | 221 | 40 | 231 | 7.80e-17 | 80.9 |
| MS.gene22124.t1 | MTR_7g116520 | 26.479 | 355 | 198 | 18 | 28 | 356 | 33 | 350 | 9.35e-17 | 81.3 |
| MS.gene22124.t1 | MTR_1g024890 | 25.858 | 379 | 217 | 18 | 8 | 356 | 4 | 348 | 1.53e-16 | 80.5 |
| MS.gene22124.t1 | MTR_3g021460 | 24.484 | 339 | 217 | 9 | 29 | 359 | 31 | 338 | 1.72e-16 | 80.1 |
| MS.gene22124.t1 | MTR_8g075200 | 26.110 | 383 | 227 | 15 | 1 | 355 | 2 | 356 | 2.40e-16 | 80.1 |
| MS.gene22124.t1 | MTR_3g114120 | 27.647 | 340 | 198 | 15 | 29 | 350 | 47 | 356 | 5.56e-16 | 79.0 |
| MS.gene22124.t1 | MTR_1g069175 | 26.146 | 371 | 227 | 15 | 9 | 358 | 9 | 353 | 3.87e-15 | 76.3 |
| MS.gene22124.t1 | MTR_8g075220 | 24.219 | 384 | 238 | 13 | 1 | 355 | 1 | 360 | 5.42e-15 | 75.9 |
| MS.gene22124.t1 | MTR_1g092740 | 24.776 | 335 | 211 | 12 | 30 | 353 | 39 | 343 | 1.01e-14 | 75.1 |
| MS.gene22124.t1 | MTR_2g033920 | 28.470 | 281 | 167 | 11 | 28 | 293 | 34 | 295 | 1.87e-14 | 73.9 |
| MS.gene22124.t1 | MTR_2g461580 | 23.181 | 371 | 240 | 11 | 1 | 359 | 1 | 338 | 3.49e-14 | 73.2 |
| MS.gene22124.t1 | MTR_5g093090 | 26.452 | 310 | 182 | 13 | 4 | 295 | 11 | 292 | 6.76e-14 | 72.0 |
| MS.gene22124.t1 | MTR_3g023220 | 25.000 | 328 | 198 | 11 | 30 | 345 | 34 | 325 | 2.80e-13 | 70.5 |
| MS.gene22124.t1 | MTR_1g060520 | 23.894 | 339 | 185 | 13 | 26 | 353 | 37 | 313 | 3.05e-12 | 67.4 |
| MS.gene22124.t1 | MTR_2g017965 | 25.298 | 336 | 204 | 14 | 30 | 350 | 34 | 337 | 4.91e-12 | 67.0 |
| MS.gene22124.t1 | MTR_5g087690 | 23.919 | 347 | 201 | 13 | 29 | 352 | 50 | 356 | 8.19e-11 | 63.2 |
| MS.gene22124.t1 | MTR_1g092690 | 24.915 | 293 | 183 | 13 | 20 | 308 | 45 | 304 | 8.90e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22124.t1 | AT5G45910 | 44.920 | 374 | 190 | 9 | 1 | 362 | 1 | 370 | 2.37e-101 | 304 |
| MS.gene22124.t1 | AT1G31550 | 42.588 | 371 | 192 | 11 | 1 | 361 | 10 | 369 | 7.30e-88 | 271 |
| MS.gene22124.t1 | AT1G28600 | 43.056 | 360 | 189 | 10 | 11 | 361 | 12 | 364 | 9.18e-88 | 270 |
| MS.gene22124.t1 | AT1G28610 | 41.962 | 367 | 197 | 9 | 6 | 363 | 7 | 366 | 1.33e-87 | 270 |
| MS.gene22124.t1 | AT1G28590 | 41.908 | 346 | 187 | 7 | 27 | 364 | 34 | 373 | 8.69e-86 | 266 |
| MS.gene22124.t1 | AT1G28570 | 40.970 | 371 | 201 | 9 | 1 | 361 | 6 | 368 | 1.81e-85 | 264 |
| MS.gene22124.t1 | AT2G27360 | 42.609 | 345 | 181 | 9 | 27 | 361 | 31 | 368 | 2.98e-84 | 261 |
| MS.gene22124.t1 | AT1G31550 | 42.049 | 371 | 191 | 12 | 1 | 361 | 10 | 366 | 3.85e-84 | 261 |
| MS.gene22124.t1 | AT1G28580 | 41.908 | 346 | 181 | 8 | 27 | 361 | 35 | 371 | 2.34e-83 | 259 |
| MS.gene22124.t1 | AT1G28640 | 40.751 | 346 | 189 | 8 | 27 | 363 | 33 | 371 | 1.09e-80 | 252 |
| MS.gene22124.t1 | AT1G28670 | 41.714 | 350 | 181 | 10 | 27 | 363 | 33 | 372 | 9.33e-80 | 249 |
| MS.gene22124.t1 | AT1G28660 | 39.946 | 373 | 198 | 11 | 3 | 363 | 13 | 371 | 7.74e-79 | 247 |
| MS.gene22124.t1 | AT1G28660 | 39.946 | 373 | 197 | 12 | 3 | 363 | 13 | 370 | 4.90e-78 | 245 |
| MS.gene22124.t1 | AT1G28650 | 41.429 | 350 | 181 | 11 | 27 | 363 | 35 | 373 | 8.04e-78 | 244 |
| MS.gene22124.t1 | AT1G28580 | 40.000 | 295 | 161 | 7 | 74 | 361 | 5 | 290 | 9.35e-66 | 211 |
| MS.gene22124.t1 | AT3G48460 | 38.000 | 350 | 187 | 11 | 26 | 361 | 35 | 368 | 1.12e-62 | 205 |
| MS.gene22124.t1 | AT5G03980 | 36.337 | 344 | 166 | 11 | 15 | 353 | 15 | 310 | 6.25e-55 | 183 |
| MS.gene22124.t1 | AT5G14450 | 32.987 | 385 | 214 | 13 | 3 | 367 | 21 | 381 | 1.17e-46 | 164 |
| MS.gene22124.t1 | AT1G28570 | 40.187 | 214 | 117 | 5 | 154 | 361 | 88 | 296 | 2.23e-46 | 161 |
| MS.gene22124.t1 | AT1G28570 | 43.902 | 82 | 42 | 2 | 1 | 78 | 6 | 87 | 7.06e-11 | 63.2 |
| MS.gene22124.t1 | AT1G28570 | 40.476 | 210 | 114 | 5 | 158 | 361 | 1 | 205 | 5.74e-46 | 157 |
| MS.gene22124.t1 | AT1G56670 | 32.398 | 392 | 216 | 15 | 1 | 368 | 1 | 367 | 2.29e-45 | 160 |
| MS.gene22124.t1 | AT4G01130 | 32.773 | 357 | 202 | 12 | 27 | 361 | 32 | 372 | 6.70e-44 | 156 |
| MS.gene22124.t1 | AT1G67830 | 33.702 | 362 | 195 | 15 | 20 | 353 | 21 | 365 | 3.09e-43 | 154 |
| MS.gene22124.t1 | AT1G54790 | 32.368 | 380 | 214 | 16 | 3 | 361 | 12 | 369 | 1.41e-41 | 150 |
| MS.gene22124.t1 | AT1G09390 | 31.909 | 351 | 205 | 13 | 29 | 368 | 37 | 364 | 2.24e-39 | 144 |
| MS.gene22124.t1 | AT3G62280 | 31.356 | 354 | 204 | 12 | 20 | 361 | 31 | 357 | 3.85e-39 | 143 |
| MS.gene22124.t1 | AT3G26430 | 31.373 | 357 | 212 | 12 | 27 | 363 | 29 | 372 | 5.84e-39 | 143 |
| MS.gene22124.t1 | AT1G28600 | 42.289 | 201 | 105 | 7 | 11 | 204 | 12 | 208 | 7.16e-39 | 138 |
| MS.gene22124.t1 | AT3G05180 | 31.322 | 348 | 208 | 12 | 27 | 356 | 34 | 368 | 1.17e-37 | 139 |
| MS.gene22124.t1 | AT1G54790 | 31.282 | 390 | 212 | 17 | 1 | 361 | 6 | 368 | 3.43e-37 | 138 |
| MS.gene22124.t1 | AT1G28610 | 40.580 | 207 | 107 | 8 | 6 | 204 | 7 | 205 | 4.67e-35 | 129 |
| MS.gene22124.t1 | AT1G54790 | 29.854 | 412 | 215 | 18 | 1 | 361 | 6 | 394 | 2.03e-34 | 131 |
| MS.gene22124.t1 | AT4G01130 | 33.692 | 279 | 161 | 8 | 27 | 293 | 32 | 298 | 8.30e-34 | 128 |
| MS.gene22124.t1 | AT3G27950 | 30.749 | 374 | 220 | 13 | 9 | 363 | 11 | 364 | 1.82e-33 | 128 |
| MS.gene22124.t1 | AT1G56670 | 31.429 | 315 | 176 | 11 | 1 | 293 | 1 | 297 | 5.41e-32 | 122 |
| MS.gene22124.t1 | AT5G40990 | 30.645 | 372 | 218 | 14 | 4 | 358 | 11 | 359 | 8.99e-31 | 120 |
| MS.gene22124.t1 | AT3G14225 | 27.907 | 344 | 211 | 11 | 29 | 357 | 37 | 358 | 6.81e-30 | 118 |
| MS.gene22124.t1 | AT5G45950 | 30.612 | 343 | 195 | 13 | 29 | 358 | 40 | 352 | 2.75e-29 | 116 |
| MS.gene22124.t1 | AT2G40250 | 28.962 | 366 | 218 | 15 | 3 | 350 | 9 | 350 | 3.45e-29 | 116 |
| MS.gene22124.t1 | AT3G14225 | 27.907 | 344 | 215 | 11 | 29 | 357 | 37 | 362 | 4.70e-29 | 116 |
| MS.gene22124.t1 | AT1G71120 | 26.765 | 340 | 209 | 11 | 29 | 356 | 31 | 342 | 6.55e-29 | 115 |
| MS.gene22124.t1 | AT1G75920 | 29.947 | 374 | 200 | 16 | 1 | 355 | 6 | 336 | 6.10e-28 | 112 |
| MS.gene22124.t1 | AT1G06990 | 28.652 | 356 | 224 | 13 | 10 | 355 | 18 | 353 | 2.82e-27 | 111 |
| MS.gene22124.t1 | AT4G10950 | 27.616 | 344 | 215 | 13 | 25 | 356 | 66 | 387 | 3.39e-27 | 111 |
| MS.gene22124.t1 | AT1G53920 | 28.852 | 357 | 213 | 15 | 29 | 370 | 48 | 378 | 4.68e-27 | 110 |
| MS.gene22124.t1 | AT1G53940 | 30.814 | 344 | 203 | 14 | 29 | 358 | 39 | 361 | 5.47e-27 | 110 |
| MS.gene22124.t1 | AT1G53990 | 26.738 | 374 | 227 | 13 | 1 | 357 | 6 | 349 | 1.06e-26 | 109 |
| MS.gene22124.t1 | AT3G62280 | 29.682 | 283 | 168 | 9 | 20 | 293 | 31 | 291 | 6.72e-26 | 105 |
| MS.gene22124.t1 | AT1G20120 | 28.406 | 345 | 204 | 12 | 27 | 355 | 76 | 393 | 5.38e-25 | 105 |
| MS.gene22124.t1 | AT4G10950 | 27.326 | 344 | 212 | 14 | 25 | 356 | 66 | 383 | 1.47e-24 | 103 |
| MS.gene22124.t1 | AT1G73610 | 27.704 | 379 | 208 | 16 | 1 | 355 | 1 | 337 | 2.07e-24 | 102 |
| MS.gene22124.t1 | AT1G75920 | 29.412 | 391 | 195 | 18 | 1 | 355 | 1 | 346 | 2.61e-24 | 102 |
| MS.gene22124.t1 | AT1G20132 | 28.909 | 339 | 206 | 13 | 29 | 355 | 61 | 376 | 3.14e-24 | 102 |
| MS.gene22124.t1 | AT1G23500 | 27.221 | 349 | 199 | 13 | 28 | 360 | 34 | 343 | 5.99e-24 | 101 |
| MS.gene22124.t1 | AT2G03980 | 29.878 | 328 | 199 | 13 | 27 | 345 | 41 | 346 | 3.10e-23 | 99.8 |
| MS.gene22124.t1 | AT2G03980 | 29.878 | 328 | 199 | 13 | 27 | 345 | 41 | 346 | 3.10e-23 | 99.8 |
| MS.gene22124.t1 | AT2G03980 | 29.878 | 328 | 199 | 13 | 27 | 345 | 41 | 346 | 3.10e-23 | 99.8 |
| MS.gene22124.t1 | AT2G03980 | 29.878 | 328 | 199 | 13 | 27 | 345 | 41 | 346 | 3.10e-23 | 99.8 |
| MS.gene22124.t1 | AT3G09930 | 26.706 | 337 | 215 | 10 | 20 | 349 | 30 | 341 | 1.61e-22 | 97.8 |
| MS.gene22124.t1 | AT3G09930 | 26.706 | 337 | 215 | 10 | 20 | 349 | 30 | 341 | 1.61e-22 | 97.8 |
| MS.gene22124.t1 | AT5G45960 | 26.074 | 349 | 203 | 15 | 29 | 353 | 47 | 364 | 1.85e-22 | 97.8 |
| MS.gene22124.t1 | AT1G75920 | 29.283 | 321 | 167 | 14 | 55 | 355 | 28 | 308 | 2.72e-22 | 96.3 |
| MS.gene22124.t1 | AT2G04570 | 26.431 | 367 | 221 | 14 | 6 | 354 | 7 | 342 | 7.71e-22 | 95.9 |
| MS.gene22124.t1 | AT2G42990 | 29.448 | 326 | 197 | 13 | 29 | 343 | 28 | 331 | 8.25e-22 | 95.5 |
| MS.gene22124.t1 | AT5G42170 | 29.217 | 332 | 209 | 10 | 29 | 354 | 50 | 361 | 9.50e-22 | 95.9 |
| MS.gene22124.t1 | AT4G01130 | 26.846 | 298 | 186 | 10 | 84 | 361 | 1 | 286 | 8.14e-21 | 92.0 |
| MS.gene22124.t1 | AT1G58430 | 27.869 | 366 | 224 | 17 | 4 | 353 | 9 | 350 | 1.59e-20 | 92.0 |
| MS.gene22124.t1 | AT5G15720 | 26.801 | 347 | 195 | 15 | 29 | 350 | 30 | 342 | 3.90e-20 | 90.9 |
| MS.gene22124.t1 | AT3G14820 | 28.909 | 339 | 200 | 14 | 29 | 354 | 32 | 342 | 4.29e-20 | 90.9 |
| MS.gene22124.t1 | AT5G03610 | 23.848 | 369 | 246 | 11 | 3 | 360 | 11 | 355 | 4.32e-20 | 90.9 |
| MS.gene22124.t1 | AT1G75930 | 27.966 | 354 | 190 | 16 | 27 | 353 | 27 | 342 | 4.36e-20 | 90.5 |
| MS.gene22124.t1 | AT3G16370 | 26.190 | 336 | 218 | 11 | 29 | 354 | 30 | 345 | 4.78e-20 | 90.5 |
| MS.gene22124.t1 | AT1G71250 | 25.588 | 340 | 226 | 11 | 29 | 360 | 41 | 361 | 5.46e-20 | 90.9 |
| MS.gene22124.t1 | AT1G75910 | 26.810 | 373 | 209 | 16 | 3 | 355 | 8 | 336 | 7.79e-20 | 89.7 |
| MS.gene22124.t1 | AT5G08460 | 26.807 | 332 | 208 | 11 | 27 | 344 | 47 | 357 | 1.27e-19 | 89.7 |
| MS.gene22124.t1 | AT2G23540 | 29.345 | 351 | 198 | 16 | 29 | 356 | 48 | 371 | 1.57e-19 | 89.4 |
| MS.gene22124.t1 | AT2G30310 | 28.846 | 364 | 218 | 18 | 3 | 350 | 8 | 346 | 2.70e-19 | 88.6 |
| MS.gene22124.t1 | AT1G20135 | 25.148 | 338 | 200 | 11 | 27 | 349 | 27 | 326 | 3.52e-19 | 87.8 |
| MS.gene22124.t1 | AT1G20130 | 26.934 | 349 | 207 | 14 | 29 | 355 | 204 | 526 | 3.62e-19 | 89.4 |
| MS.gene22124.t1 | AT1G20130 | 26.934 | 349 | 207 | 14 | 29 | 355 | 184 | 506 | 3.71e-19 | 89.4 |
| MS.gene22124.t1 | AT1G75900 | 26.944 | 360 | 229 | 12 | 6 | 354 | 20 | 356 | 6.27e-19 | 87.4 |
| MS.gene22124.t1 | AT1G75920 | 27.049 | 366 | 190 | 14 | 1 | 355 | 6 | 305 | 9.05e-19 | 86.3 |
| MS.gene22124.t1 | AT1G75890 | 27.381 | 336 | 216 | 12 | 29 | 355 | 47 | 363 | 9.89e-19 | 87.0 |
| MS.gene22124.t1 | AT2G31540 | 28.857 | 350 | 209 | 16 | 20 | 353 | 25 | 350 | 1.26e-18 | 86.7 |
| MS.gene22124.t1 | AT5G63170 | 25.836 | 329 | 199 | 13 | 29 | 346 | 28 | 322 | 1.40e-18 | 86.3 |
| MS.gene22124.t1 | AT3G04290 | 27.322 | 366 | 224 | 14 | 6 | 358 | 11 | 347 | 1.50e-18 | 86.3 |
| MS.gene22124.t1 | AT1G75890 | 27.381 | 336 | 216 | 12 | 29 | 355 | 76 | 392 | 1.96e-18 | 86.3 |
| MS.gene22124.t1 | AT1G59406 | 27.224 | 371 | 225 | 15 | 1 | 355 | 1 | 342 | 2.17e-18 | 85.9 |
| MS.gene22124.t1 | AT1G59030 | 27.224 | 371 | 225 | 15 | 1 | 355 | 1 | 342 | 2.17e-18 | 85.9 |
| MS.gene22124.t1 | AT1G58725 | 27.224 | 371 | 225 | 15 | 1 | 355 | 1 | 342 | 2.17e-18 | 85.9 |
| MS.gene22124.t1 | AT5G22810 | 26.776 | 366 | 234 | 14 | 1 | 354 | 8 | 351 | 4.42e-18 | 85.1 |
| MS.gene22124.t1 | AT4G26790 | 25.872 | 344 | 214 | 12 | 27 | 355 | 27 | 344 | 5.42e-18 | 84.7 |
| MS.gene22124.t1 | AT4G26790 | 25.872 | 344 | 214 | 12 | 27 | 355 | 27 | 344 | 5.42e-18 | 84.7 |
| MS.gene22124.t1 | AT5G03820 | 26.503 | 366 | 237 | 15 | 1 | 354 | 4 | 349 | 6.47e-18 | 84.3 |
| MS.gene22124.t1 | AT2G24560 | 26.074 | 349 | 220 | 14 | 20 | 353 | 24 | 349 | 7.79e-18 | 84.3 |
| MS.gene22124.t1 | AT1G74460 | 26.329 | 395 | 218 | 17 | 3 | 367 | 6 | 357 | 9.03e-18 | 84.3 |
| MS.gene22124.t1 | AT1G54020 | 25.989 | 354 | 215 | 17 | 16 | 360 | 21 | 336 | 9.39e-18 | 84.3 |
| MS.gene22124.t1 | AT5G03820 | 26.230 | 366 | 238 | 15 | 1 | 354 | 32 | 377 | 1.85e-17 | 83.6 |
| MS.gene22124.t1 | AT1G29670 | 26.882 | 372 | 222 | 17 | 5 | 359 | 11 | 349 | 4.78e-17 | 82.0 |
| MS.gene22124.t1 | AT2G30220 | 27.913 | 369 | 214 | 17 | 3 | 350 | 8 | 345 | 6.32e-17 | 81.6 |
| MS.gene22124.t1 | AT1G29670 | 27.151 | 372 | 221 | 17 | 5 | 359 | 79 | 417 | 6.43e-17 | 82.0 |
| MS.gene22124.t1 | AT5G15720 | 25.965 | 285 | 169 | 11 | 29 | 293 | 30 | 292 | 1.19e-16 | 80.1 |
| MS.gene22124.t1 | AT1G53940 | 29.496 | 278 | 166 | 10 | 28 | 293 | 38 | 297 | 1.79e-16 | 79.7 |
| MS.gene22124.t1 | AT1G71691 | 27.273 | 352 | 193 | 15 | 29 | 356 | 55 | 367 | 2.83e-16 | 80.1 |
| MS.gene22124.t1 | AT5G55050 | 27.515 | 338 | 205 | 15 | 29 | 349 | 39 | 353 | 2.87e-16 | 79.7 |
| MS.gene22124.t1 | AT3G53100 | 26.331 | 338 | 214 | 14 | 29 | 354 | 29 | 343 | 3.28e-16 | 79.3 |
| MS.gene22124.t1 | AT4G28780 | 26.957 | 345 | 209 | 14 | 28 | 356 | 30 | 347 | 4.14e-16 | 79.3 |
| MS.gene22124.t1 | AT1G54000 | 24.781 | 343 | 206 | 15 | 26 | 353 | 33 | 338 | 6.14e-16 | 79.0 |
| MS.gene22124.t1 | AT2G19010 | 27.826 | 345 | 198 | 16 | 31 | 361 | 62 | 369 | 6.59e-16 | 79.0 |
| MS.gene22124.t1 | AT2G19010 | 27.826 | 345 | 198 | 16 | 31 | 361 | 32 | 339 | 7.53e-16 | 78.2 |
| MS.gene22124.t1 | AT5G41890 | 26.377 | 345 | 217 | 11 | 31 | 356 | 33 | 359 | 8.71e-16 | 78.6 |
| MS.gene22124.t1 | AT5G03810 | 26.359 | 368 | 234 | 15 | 1 | 354 | 1 | 345 | 1.08e-15 | 77.8 |
| MS.gene22124.t1 | AT3G14210 | 24.713 | 348 | 218 | 12 | 18 | 353 | 25 | 340 | 2.22e-15 | 77.4 |
| MS.gene22124.t1 | AT1G58520 | 25.806 | 341 | 204 | 12 | 29 | 355 | 30 | 335 | 3.40e-15 | 76.3 |
| MS.gene22124.t1 | AT1G58525 | 25.806 | 341 | 204 | 12 | 29 | 355 | 30 | 335 | 3.40e-15 | 76.3 |
| MS.gene22124.t1 | AT2G19060 | 26.513 | 347 | 202 | 15 | 31 | 361 | 32 | 341 | 3.76e-15 | 76.3 |
| MS.gene22124.t1 | AT1G54010 | 24.551 | 334 | 204 | 15 | 25 | 345 | 32 | 330 | 5.82e-15 | 75.9 |
| MS.gene22124.t1 | AT5G37690 | 23.582 | 335 | 215 | 13 | 33 | 353 | 31 | 338 | 3.08e-14 | 73.6 |
| MS.gene22124.t1 | AT5G03600 | 25.000 | 340 | 200 | 15 | 24 | 349 | 9 | 307 | 4.69e-14 | 72.8 |
| MS.gene22124.t1 | AT5G03600 | 25.000 | 340 | 200 | 15 | 24 | 349 | 44 | 342 | 7.88e-14 | 72.4 |
| MS.gene22124.t1 | AT2G36325 | 24.702 | 336 | 210 | 11 | 30 | 354 | 48 | 351 | 1.07e-13 | 72.0 |
| MS.gene22124.t1 | AT1G29660 | 26.426 | 333 | 209 | 16 | 31 | 351 | 34 | 342 | 1.72e-13 | 71.6 |
| MS.gene22124.t1 | AT1G33811 | 23.656 | 372 | 238 | 17 | 1 | 351 | 4 | 350 | 1.74e-13 | 71.6 |
| MS.gene22124.t1 | AT1G71691 | 27.839 | 273 | 141 | 11 | 29 | 277 | 55 | 295 | 8.75e-13 | 68.9 |
| MS.gene22124.t1 | AT1G54030 | 22.866 | 328 | 209 | 12 | 28 | 349 | 51 | 340 | 1.37e-12 | 68.9 |
| MS.gene22124.t1 | AT3G43550 | 27.240 | 279 | 167 | 11 | 29 | 293 | 30 | 286 | 1.95e-11 | 64.7 |
| MS.gene22124.t1 | AT1G53970 | 51.515 | 66 | 29 | 1 | 29 | 91 | 20 | 85 | 3.73e-11 | 59.7 |
| MS.gene22124.t1 | AT1G53970 | 51.515 | 66 | 29 | 1 | 29 | 91 | 20 | 85 | 3.73e-11 | 59.7 |
| MS.gene22124.t1 | AT5G15720 | 24.242 | 297 | 168 | 13 | 78 | 350 | 48 | 311 | 7.91e-11 | 63.2 |
Find 75 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGAAAGGAGCAGGTTTA+AGG | 0.171469 | 3.4:-42886464 | None:intergenic |
| AAAGAGGATTATGATGAATT+TGG | 0.194125 | 3.4:+42885976 | MS.gene22124:CDS |
| CATCATAATCCTCTTTCTTC+TGG | 0.251095 | 3.4:-42885969 | None:intergenic |
| CATACCACCGTGACGCTAAT+TGG | 0.297782 | 3.4:+42886310 | MS.gene22124:CDS |
| TACGAAGCCATCTTTAACTT+TGG | 0.316279 | 3.4:+42885013 | MS.gene22124:CDS |
| CAAACAATCATTATTTATAG+TGG | 0.326230 | 3.4:+42885619 | MS.gene22124:CDS |
| TTTAGTATTACCTTTGCATA+TGG | 0.350608 | 3.4:+42884953 | MS.gene22124:CDS |
| TGCTTTCGGCAGAACATCTA+TGG | 0.352248 | 3.4:+42885063 | MS.gene22124:CDS |
| AAAGCATGTTGTGGAGGAAT+TGG | 0.363705 | 3.4:+42886285 | MS.gene22124:CDS |
| TCCCTTCTTTGTATCACCTT+GGG | 0.363775 | 3.4:-42885333 | None:intergenic |
| CGTAATTGATTCAACTATCA+AGG | 0.368396 | 3.4:-42885711 | None:intergenic |
| AAAGAGAATGAAAATCTTCA+TGG | 0.368824 | 3.4:-42884933 | None:intergenic |
| CTTGAAAGGAGCAGGTTTAA+GGG | 0.370952 | 3.4:-42886463 | None:intergenic |
| AAAATATACTATCTTAGCTT+GGG | 0.372407 | 3.4:-42886082 | None:intergenic |
| AGGACCTTCAATTAAACCTT+TGG | 0.383976 | 3.4:-42886427 | None:intergenic |
| TTTCTGTCGTAATGTCTCTA+TGG | 0.389347 | 3.4:-42886055 | None:intergenic |
| CTCCCTTCTTTGTATCACCT+TGG | 0.391599 | 3.4:-42885334 | None:intergenic |
| ATGGATAAAAGAAGTCCTTA+TGG | 0.404744 | 3.4:+42885082 | MS.gene22124:CDS |
| TTATTTATAGTGGGAGAGAT+TGG | 0.406970 | 3.4:+42885629 | MS.gene22124:CDS |
| TATGAAGCACCACAACAATA+TGG | 0.415657 | 3.4:+42886132 | MS.gene22124:CDS |
| TTGAAATACGTTGAACCATA+AGG | 0.431464 | 3.4:-42885097 | None:intergenic |
| GCAGTTGAGCTAGTGGTTCC+AGG | 0.432330 | 3.4:+42885898 | MS.gene22124:CDS |
| TAGACTATCTTGAAAGGAGC+AGG | 0.441952 | 3.4:-42886471 | None:intergenic |
| CGACTCATCATAGATTTCAT+AGG | 0.447348 | 3.4:+42885148 | MS.gene22124:CDS |
| TATCAGGCATTAATTGAAGA+AGG | 0.448138 | 3.4:+42885874 | MS.gene22124:intron |
| CAAAATATACTATCTTAGCT+TGG | 0.450001 | 3.4:-42886083 | None:intergenic |
| CATCCCATTGGAAAGTTACC+TGG | 0.451479 | 3.4:-42885916 | None:intergenic |
| ATAGCCAAAGGTTTAATTGA+AGG | 0.457396 | 3.4:+42886423 | MS.gene22124:CDS |
| TGTAGGCTTTACTTCTGATA+AGG | 0.458739 | 3.4:+42886251 | MS.gene22124:intron |
| TGGTGCTTCATATAAACGTT+TGG | 0.458875 | 3.4:-42886121 | None:intergenic |
| TATTTGCTTATATGCTGCTT+CGG | 0.461985 | 3.4:-42886403 | None:intergenic |
| GACACGGGAAACGCTGCTTT+CGG | 0.463262 | 3.4:+42885049 | MS.gene22124:CDS |
| TTAAATGTAGCTGAGGCATA+CGG | 0.480816 | 3.4:+42885272 | MS.gene22124:intron |
| TTATTGTGTAAAAGCAAAGA+AGG | 0.488816 | 3.4:+42885485 | MS.gene22124:CDS |
| ACGTATTTCAAACATCCAAC+GGG | 0.490382 | 3.4:+42885109 | MS.gene22124:CDS |
| CGTTGAGTGTGCAATTTGAC+TGG | 0.498847 | 3.4:+42885444 | MS.gene22124:CDS |
| AAACAATCATTATTTATAGT+GGG | 0.503187 | 3.4:+42885620 | MS.gene22124:CDS |
| CAATTAGCGTCACGGTGGTA+TGG | 0.513008 | 3.4:-42886309 | None:intergenic |
| AGAGTCACCAAAGTTAAAGA+TGG | 0.513197 | 3.4:-42885020 | None:intergenic |
| TTTATAGTGGGAGAGATTGG+TGG | 0.518109 | 3.4:+42885632 | MS.gene22124:CDS |
| AAAGGAGCAGGTTTAAGGGA+TGG | 0.527635 | 3.4:-42886459 | None:intergenic |
| GTTCCAGGTAACTTTCCAAT+GGG | 0.527784 | 3.4:+42885913 | MS.gene22124:CDS |
| TTGTTGACATTTAAAGAGGC+CGG | 0.532940 | 3.4:-42885308 | None:intergenic |
| AACCCAAGGTGATACAAAGA+AGG | 0.534379 | 3.4:+42885331 | MS.gene22124:CDS |
| AACGTATTTCAAACATCCAA+CGG | 0.542080 | 3.4:+42885108 | MS.gene22124:CDS |
| AAAGATTAGCCAGAAGAAAG+AGG | 0.542962 | 3.4:+42885960 | MS.gene22124:CDS |
| AGAAGGAGCAGTTGAGCTAG+TGG | 0.543690 | 3.4:+42885891 | MS.gene22124:CDS |
| AAGATGGCTTCGTATGGTAG+AGG | 0.549261 | 3.4:-42885004 | None:intergenic |
| GCTAATTGGTGTGGAATGGC+TGG | 0.549385 | 3.4:+42886324 | MS.gene22124:CDS |
| GGTTCCAGGTAACTTTCCAA+TGG | 0.550612 | 3.4:+42885912 | MS.gene22124:CDS |
| ATGTCAACATTGCATCCCAT+TGG | 0.563361 | 3.4:-42885928 | None:intergenic |
| TTAAGGGATGGATTTGCAGA+AGG | 0.566452 | 3.4:-42886447 | None:intergenic |
| CCATCTGACATGCGTCCCGT+TGG | 0.567012 | 3.4:-42885124 | None:intergenic |
| TAAATGTAGCTGAGGCATAC+GGG | 0.568105 | 3.4:+42885273 | MS.gene22124:intron |
| CCAACGGGACGCATGTCAGA+TGG | 0.570122 | 3.4:+42885124 | MS.gene22124:CDS |
| GTAATTGATTCAACTATCAA+GGG | 0.575388 | 3.4:-42885710 | None:intergenic |
| TGAGATATAACATACATTGG+TGG | 0.578047 | 3.4:-42885738 | None:intergenic |
| CACCGTGACGCTAATTGGTG+TGG | 0.579361 | 3.4:+42886315 | MS.gene22124:CDS |
| CAATTCTAGACTATCTTGAA+AGG | 0.579606 | 3.4:-42886477 | None:intergenic |
| CTTTACACACCATATTGTTG+TGG | 0.589049 | 3.4:-42886141 | None:intergenic |
| CTCAACGAGTTATTTGTCGC+GGG | 0.589753 | 3.4:-42885428 | None:intergenic |
| AAGTTAAAGATGGCTTCGTA+TGG | 0.591022 | 3.4:-42885010 | None:intergenic |
| AAATATTATTATGATCATAG+TGG | 0.607839 | 3.4:+42885395 | MS.gene22124:CDS |
| TTAAATGTCAACAAAACCCA+AGG | 0.608608 | 3.4:+42885317 | MS.gene22124:CDS |
| TGGTGACTCTACAAGTGACA+CGG | 0.631100 | 3.4:+42885033 | MS.gene22124:CDS |
| AAATATACTATCTTAGCTTG+GGG | 0.633730 | 3.4:-42886081 | None:intergenic |
| TGACGCTAATTGGTGTGGAA+TGG | 0.634399 | 3.4:+42886320 | MS.gene22124:CDS |
| GCATATAAGCAAATAGCCAA+AGG | 0.635574 | 3.4:+42886411 | MS.gene22124:CDS |
| TATGCTGCTTCGGTTAAGTG+AGG | 0.639327 | 3.4:-42886393 | None:intergenic |
| ACCCAAGGTGATACAAAGAA+GGG | 0.642631 | 3.4:+42885332 | MS.gene22124:CDS |
| TTCCACACCAATTAGCGTCA+CGG | 0.646318 | 3.4:-42886317 | None:intergenic |
| TTATTATGATCATAGTGGAG+TGG | 0.656693 | 3.4:+42885400 | MS.gene22124:CDS |
| ACTCAACGAGTTATTTGTCG+CGG | 0.663418 | 3.4:-42885429 | None:intergenic |
| GGTGACTCTACAAGTGACAC+GGG | 0.677598 | 3.4:+42885034 | MS.gene22124:CDS |
| CACACCAATTAGCGTCACGG+TGG | 0.757662 | 3.4:-42886314 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTAATTTTTCTTATC+AGG | + | chr3.4:42885858-42885877 | MS.gene22124:intron | 10.0% |
| !! | AAACAATCATTATTTATAGT+GGG | + | chr3.4:42885620-42885639 | MS.gene22124:CDS | 15.0% |
| !! | AAATATTATTATGATCATAG+TGG | + | chr3.4:42885395-42885414 | MS.gene22124:CDS | 15.0% |
| !! | ATATAATCTATAACTTAAAG+AGG | - | chr3.4:42885804-42885823 | None:intergenic | 15.0% |
| !!! | TCAAAACTAATAAATTTTGA+TGG | + | chr3.4:42886369-42886388 | MS.gene22124:CDS | 15.0% |
| !!! | TCAAAATTTATTAGTTTTGA+AGG | - | chr3.4:42886369-42886388 | None:intergenic | 15.0% |
| !! | AAAATATACTATCTTAGCTT+GGG | - | chr3.4:42886085-42886104 | None:intergenic | 20.0% |
| !! | CAAACAATCATTATTTATAG+TGG | + | chr3.4:42885619-42885638 | MS.gene22124:CDS | 20.0% |
| !! | TATTATTTGTGTCAAATTCA+TGG | + | chr3.4:42885529-42885548 | MS.gene22124:intron | 20.0% |
| !!! | TTTTAAAAATCCATATGCAA+AGG | - | chr3.4:42884966-42884985 | None:intergenic | 20.0% |
| ! | AAAGAGGATTATGATGAATT+TGG | + | chr3.4:42885976-42885995 | MS.gene22124:CDS | 25.0% |
| ! | AATAAATCGTAAGCTTAACA+AGG | - | chr3.4:42886181-42886200 | None:intergenic | 25.0% |
| ! | CAAAATATACTATCTTAGCT+TGG | - | chr3.4:42886086-42886105 | None:intergenic | 25.0% |
| ! | TTATTGTGTAAAAGCAAAGA+AGG | + | chr3.4:42885485-42885504 | MS.gene22124:CDS | 25.0% |
| ! | TTTAGTATTACCTTTGCATA+TGG | + | chr3.4:42884953-42884972 | MS.gene22124:CDS | 25.0% |
| ! | TTTATGTGCATTAATGATGT+AGG | + | chr3.4:42886234-42886253 | MS.gene22124:intron | 25.0% |
| !! | AAATATACTATCTTAGCTTG+GGG | - | chr3.4:42886084-42886103 | None:intergenic | 25.0% |
| !! | ATCTGAGATATAACATACAT+TGG | - | chr3.4:42885744-42885763 | None:intergenic | 25.0% |
| !! | GTAATTGATTCAACTATCAA+GGG | - | chr3.4:42885713-42885732 | None:intergenic | 25.0% |
| !!! | TCTTTGCTTTTACACAATAA+GGG | - | chr3.4:42885485-42885504 | None:intergenic | 25.0% |
| !!! | TGTTATTTTAAATGTAGCTG+AGG | + | chr3.4:42885265-42885284 | MS.gene22124:intron | 25.0% |
| !!! | TTCTTTGCTTTTACACAATA+AGG | - | chr3.4:42885486-42885505 | None:intergenic | 25.0% |
| AACGTATTTCAAACATCCAA+CGG | + | chr3.4:42885108-42885127 | MS.gene22124:CDS | 30.0% | |
| ATAGCCAAAGGTTTAATTGA+AGG | + | chr3.4:42886423-42886442 | MS.gene22124:CDS | 30.0% | |
| ATGGATAAAAGAAGTCCTTA+TGG | + | chr3.4:42885082-42885101 | MS.gene22124:CDS | 30.0% | |
| CAAATAATATGCAAGAAGGT+AGG | - | chr3.4:42885518-42885537 | None:intergenic | 30.0% | |
| GACACAAATAATATGCAAGA+AGG | - | chr3.4:42885522-42885541 | None:intergenic | 30.0% | |
| TATCAGGCATTAATTGAAGA+AGG | + | chr3.4:42885874-42885893 | MS.gene22124:intron | 30.0% | |
| TGAGATATAACATACATTGG+TGG | - | chr3.4:42885741-42885760 | None:intergenic | 30.0% | |
| TTAAATGTCAACAAAACCCA+AGG | + | chr3.4:42885317-42885336 | MS.gene22124:CDS | 30.0% | |
| TTAATGCACATAAACTAGTG+AGG | - | chr3.4:42886228-42886247 | None:intergenic | 30.0% | |
| TTGAAATACGTTGAACCATA+AGG | - | chr3.4:42885100-42885119 | None:intergenic | 30.0% | |
| ! | AAGGGAGTTAATTTTGCTTT+TGG | + | chr3.4:42885350-42885369 | MS.gene22124:CDS | 30.0% |
| ! | CGTAATTGATTCAACTATCA+AGG | - | chr3.4:42885714-42885733 | None:intergenic | 30.0% |
| ! | TATTTGCTTATATGCTGCTT+CGG | - | chr3.4:42886406-42886425 | None:intergenic | 30.0% |
| ! | TTATTATGATCATAGTGGAG+TGG | + | chr3.4:42885400-42885419 | MS.gene22124:CDS | 30.0% |
| ! | TTATTTATAGTGGGAGAGAT+TGG | + | chr3.4:42885629-42885648 | MS.gene22124:CDS | 30.0% |
| !!! | GGTTTTGTTGACATTTAAAG+AGG | - | chr3.4:42885315-42885334 | None:intergenic | 30.0% |
| AAGTTAAAGATGGCTTCGTA+TGG | - | chr3.4:42885013-42885032 | None:intergenic | 35.0% | |
| ACGTATTTCAAACATCCAAC+GGG | + | chr3.4:42885109-42885128 | MS.gene22124:CDS | 35.0% | |
| AGAGTCACCAAAGTTAAAGA+TGG | - | chr3.4:42885023-42885042 | None:intergenic | 35.0% | |
| AGGACCTTCAATTAAACCTT+TGG | - | chr3.4:42886430-42886449 | None:intergenic | 35.0% | |
| CATCATAATCCTCTTTCTTC+TGG | - | chr3.4:42885972-42885991 | None:intergenic | 35.0% | |
| CGACTCATCATAGATTTCAT+AGG | + | chr3.4:42885148-42885167 | MS.gene22124:CDS | 35.0% | |
| CTTTACACACCATATTGTTG+TGG | - | chr3.4:42886144-42886163 | None:intergenic | 35.0% | |
| GCATATAAGCAAATAGCCAA+AGG | + | chr3.4:42886411-42886430 | MS.gene22124:CDS | 35.0% | |
| TGGTGCTTCATATAAACGTT+TGG | - | chr3.4:42886124-42886143 | None:intergenic | 35.0% | |
| TGTAGGCTTTACTTCTGATA+AGG | + | chr3.4:42886251-42886270 | MS.gene22124:intron | 35.0% | |
| TTAAATGTAGCTGAGGCATA+CGG | + | chr3.4:42885272-42885291 | MS.gene22124:intron | 35.0% | |
| TTGTTGACATTTAAAGAGGC+CGG | - | chr3.4:42885311-42885330 | None:intergenic | 35.0% | |
| TTTCTGTCGTAATGTCTCTA+TGG | - | chr3.4:42886058-42886077 | None:intergenic | 35.0% | |
| ! | AAAGATTAGCCAGAAGAAAG+AGG | + | chr3.4:42885960-42885979 | MS.gene22124:CDS | 35.0% |
| ! | TACGAAGCCATCTTTAACTT+TGG | + | chr3.4:42885013-42885032 | MS.gene22124:CDS | 35.0% |
| ! | TATGAAGCACCACAACAATA+TGG | + | chr3.4:42886132-42886151 | MS.gene22124:CDS | 35.0% |
| !! | ATTTTGAAAGCATGTTGTGG+AGG | + | chr3.4:42886279-42886298 | MS.gene22124:CDS | 35.0% |
| !! | GAGATTTTGAAAGCATGTTG+TGG | + | chr3.4:42886276-42886295 | MS.gene22124:CDS | 35.0% |
| !! | GGAGTTAATTTTGCTTTTGG+AGG | + | chr3.4:42885353-42885372 | MS.gene22124:CDS | 35.0% |
| AAAGCATGTTGTGGAGGAAT+TGG | + | chr3.4:42886285-42886304 | MS.gene22124:CDS | 40.0% | |
| AACCCAAGGTGATACAAAGA+AGG | + | chr3.4:42885331-42885350 | MS.gene22124:CDS | 40.0% | |
| ACCCAAGGTGATACAAAGAA+GGG | + | chr3.4:42885332-42885351 | MS.gene22124:CDS | 40.0% | |
| ACTCAACGAGTTATTTGTCG+CGG | - | chr3.4:42885432-42885451 | None:intergenic | 40.0% | |
| ATGTCAACATTGCATCCCAT+TGG | - | chr3.4:42885931-42885950 | None:intergenic | 40.0% | |
| CTTGAAAGGAGCAGGTTTAA+GGG | - | chr3.4:42886466-42886485 | None:intergenic | 40.0% | |
| GCACATAAACTAGTGAGGAT+GGG | - | chr3.4:42886223-42886242 | None:intergenic | 40.0% | |
| GTTCCAGGTAACTTTCCAAT+GGG | + | chr3.4:42885913-42885932 | MS.gene22124:CDS | 40.0% | |
| TAAATGTAGCTGAGGCATAC+GGG | + | chr3.4:42885273-42885292 | MS.gene22124:intron | 40.0% | |
| TAGACTATCTTGAAAGGAGC+AGG | - | chr3.4:42886474-42886493 | None:intergenic | 40.0% | |
| TCCCTTCTTTGTATCACCTT+GGG | - | chr3.4:42885336-42885355 | None:intergenic | 40.0% | |
| TCTTGAAAGGAGCAGGTTTA+AGG | - | chr3.4:42886467-42886486 | None:intergenic | 40.0% | |
| TGCACATAAACTAGTGAGGA+TGG | - | chr3.4:42886224-42886243 | None:intergenic | 40.0% | |
| TTTAAAGAGGCCGGCAAAAA+TGG | - | chr3.4:42885302-42885321 | None:intergenic | 40.0% | |
| ! | TTAAGGGATGGATTTGCAGA+AGG | - | chr3.4:42886450-42886469 | None:intergenic | 40.0% |
| ! | TTTATAGTGGGAGAGATTGG+TGG | + | chr3.4:42885632-42885651 | MS.gene22124:CDS | 40.0% |
| AAAGGAGCAGGTTTAAGGGA+TGG | - | chr3.4:42886462-42886481 | None:intergenic | 45.0% | |
| AAGATGGCTTCGTATGGTAG+AGG | - | chr3.4:42885007-42885026 | None:intergenic | 45.0% | |
| CATCCCATTGGAAAGTTACC+TGG | - | chr3.4:42885919-42885938 | None:intergenic | 45.0% | |
| CGTTGAGTGTGCAATTTGAC+TGG | + | chr3.4:42885444-42885463 | MS.gene22124:CDS | 45.0% | |
| CTCAACGAGTTATTTGTCGC+GGG | - | chr3.4:42885431-42885450 | None:intergenic | 45.0% | |
| CTCCCTTCTTTGTATCACCT+TGG | - | chr3.4:42885337-42885356 | None:intergenic | 45.0% | |
| GGTTCCAGGTAACTTTCCAA+TGG | + | chr3.4:42885912-42885931 | MS.gene22124:CDS | 45.0% | |
| TGACGCTAATTGGTGTGGAA+TGG | + | chr3.4:42886320-42886339 | MS.gene22124:CDS | 45.0% | |
| TGCTTTCGGCAGAACATCTA+TGG | + | chr3.4:42885063-42885082 | MS.gene22124:CDS | 45.0% | |
| TGGTGACTCTACAAGTGACA+CGG | + | chr3.4:42885033-42885052 | MS.gene22124:CDS | 45.0% | |
| TTCCACACCAATTAGCGTCA+CGG | - | chr3.4:42886320-42886339 | None:intergenic | 45.0% | |
| ! | TATGCTGCTTCGGTTAAGTG+AGG | - | chr3.4:42886396-42886415 | None:intergenic | 45.0% |
| !!! | ATACGGGTTGCCATTTTTGC+CGG | + | chr3.4:42885289-42885308 | MS.gene22124:CDS | 45.0% |
| AGAAGGAGCAGTTGAGCTAG+TGG | + | chr3.4:42885891-42885910 | MS.gene22124:CDS | 50.0% | |
| CAATTAGCGTCACGGTGGTA+TGG | - | chr3.4:42886312-42886331 | None:intergenic | 50.0% | |
| CATACCACCGTGACGCTAAT+TGG | + | chr3.4:42886310-42886329 | MS.gene22124:CDS | 50.0% | |
| GCTAATTGGTGTGGAATGGC+TGG | + | chr3.4:42886324-42886343 | MS.gene22124:CDS | 50.0% | |
| GGTGACTCTACAAGTGACAC+GGG | + | chr3.4:42885034-42885053 | MS.gene22124:CDS | 50.0% | |
| CACACCAATTAGCGTCACGG+TGG | - | chr3.4:42886317-42886336 | None:intergenic | 55.0% | |
| CACCGTGACGCTAATTGGTG+TGG | + | chr3.4:42886315-42886334 | MS.gene22124:CDS | 55.0% | |
| GCAGTTGAGCTAGTGGTTCC+AGG | + | chr3.4:42885898-42885917 | MS.gene22124:CDS | 55.0% | |
| ! | GACACGGGAAACGCTGCTTT+CGG | + | chr3.4:42885049-42885068 | MS.gene22124:CDS | 55.0% |
| CCAACGGGACGCATGTCAGA+TGG | + | chr3.4:42885124-42885143 | MS.gene22124:CDS | 60.0% | |
| CCATCTGACATGCGTCCCGT+TGG | - | chr3.4:42885127-42885146 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 42884935 | 42886494 | 42884935 | ID=MS.gene22124 |
| chr3.4 | mRNA | 42884935 | 42886494 | 42884935 | ID=MS.gene22124.t1;Parent=MS.gene22124 |
| chr3.4 | exon | 42884935 | 42885169 | 42884935 | ID=MS.gene22124.t1.exon1;Parent=MS.gene22124.t1 |
| chr3.4 | CDS | 42884935 | 42885169 | 42884935 | ID=cds.MS.gene22124.t1;Parent=MS.gene22124.t1 |
| chr3.4 | exon | 42885282 | 42885506 | 42885282 | ID=MS.gene22124.t1.exon2;Parent=MS.gene22124.t1 |
| chr3.4 | CDS | 42885282 | 42885506 | 42885282 | ID=cds.MS.gene22124.t1;Parent=MS.gene22124.t1 |
| chr3.4 | exon | 42885603 | 42885745 | 42885603 | ID=MS.gene22124.t1.exon3;Parent=MS.gene22124.t1 |
| chr3.4 | CDS | 42885603 | 42885745 | 42885603 | ID=cds.MS.gene22124.t1;Parent=MS.gene22124.t1 |
| chr3.4 | exon | 42885880 | 42886153 | 42885880 | ID=MS.gene22124.t1.exon4;Parent=MS.gene22124.t1 |
| chr3.4 | CDS | 42885880 | 42886153 | 42885880 | ID=cds.MS.gene22124.t1;Parent=MS.gene22124.t1 |
| chr3.4 | exon | 42886256 | 42886494 | 42886256 | ID=MS.gene22124.t1.exon5;Parent=MS.gene22124.t1 |
| chr3.4 | CDS | 42886256 | 42886494 | 42886256 | ID=cds.MS.gene22124.t1;Parent=MS.gene22124.t1 |
| Gene Sequence |
| Protein sequence |
